Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region,
   the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:
1. If the number of certain phage organism in this table  is more than 50% of the total number of CDS of the region, that phage 
   organism is considered as the major potential phage for that region; the percentage of the total number
   of that phage organism in this table in the  total number of proteins of the region is calculated and 
   then multipled by 100; the percentage of the length of that phage organism in this table in the length 
   of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:
1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber',
   'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased 
   by 10 for each keyword found.
2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
3. If there are at least 40 proteins in the region, the score will be increased by 10.
4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of
   the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
   


Totally 11 intact prophage regions have been identified.




                                  REGION         REGION_LENGTH            COMPLETENESS(score)           SPECIFIC_KEYWORD                             REGION_POSITION          TRNA_NUM                 TOTAL_PROTEIN_NUM       PHAGE_HIT_PROTEIN_NUM            HYPOTHETICAL_PROTEIN_NUM         PHAGE+HYPO_PROTEIN_PERCENTAGE    BACTERIAL_PROTEIN_NUM            ATT_SITE_SHOWUP                  PHAGE_SPECIES_NUM                MOST_COMMON_PHAGE_NAME(hit_genes_count)    FIRST_MOST_COMMON_PHAGE_NUM      FIRST_MOST_COMMON_PHAGE_PERCENTAGE   GC_PERCENTAGE                 
                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                                  1              41.2Kb                   intact(120)                   head,lysis                                   552249-593501            0                        53                      52                               1                                100%                             0                                yes                              5                                PHAGE_Pseudo_JBD25_NC_027992(44),PHAGE_Pseudo_JBD18_NC_027986(36),PHAGE_Pseudo_B3_NC_006548(33),PHAGE_Pseudo_JBD67_NC_042135(31),PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(30),PHAGE_Escher_D108_NC_013594(4),PHAGE_Pseudo_MP29_NC_011613(4),PHAGE_Ralsto_RS138_NC_029107(4),PHAGE_Entero_Mu_NC_000929(3),PHAGE_Pseudo_JBD69_NC_030908(3),PHAGE_Pseudo_JBD30_NC_020198(3),PHAGE_Pseudo_JD024_NC_024330(3),PHAGE_Burkho_BcepMu_NC_005882(3),PHAGE_Pseudo_MP48_NC_024782(3),PHAGE_Pseudo_JBD93_NC_030918(3),PHAGE_Pseudo_JBD24_NC_020203(3),PHAGE_Pseudo_H70_NC_027384(2),PHAGE_Pseudo_PA1phi_NC_023700(2),PHAGE_Pseudo_JBD5_NC_020202(2),PHAGE_Pseudo_LPB1_NC_027298(2),PHAGE_Pseudo_MP38_NC_011611(2),PHAGE_Pseudo_FHA0480_NC_041851(2),PHAGE_Pseudo_D3112_NC_005178(2),PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766(1),PHAGE_Rhodob_RC1_NC_020839(1),PHAGE_Rhodob_RcapMu_NC_016165(1),PHAGE_Burkho_BcepGomr_NC_009447(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Burkho_phi52237_NC_007145(1),PHAGE_Aeromo_65_NC_015251(1),PHAGE_Pseudo_PAK_P5_NC_022966(1),PHAGE_Vibrio_12B12_NC_021070(1),PHAGE_Haemop_SuMu_NC_019455(1),PHAGE_Rhizob_RR1_B_NC_021557(1),PHAGE_Rhodov_RS1_NC_020866(1),PHAGE_Burkho_KS5_NC_015265(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Burkho_phiE255_NC_009237(1),PHAGE_Entero_SfMu_NC_027382(1),PHAGE_Burkho_phiE202_NC_009234(1)   34                               83.01%                           63.22%                        
                                  2              18.4Kb                   questionable(80)              plate,tail                                   715433-733907            0                        24                      22                               1                                95.8%                            1                                no                               14                               PHAGE_Pseudo_phiCTX_NC_003278(6),PHAGE_Entero_Arya_NC_031048(6),PHAGE_Escher_vB_EcoM_ECOO78_NC_041926(5),PHAGE_Escher_vB_EcoM_ep3_NC_025430(4),PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(4),PHAGE_Vibrio_VP58.5_NC_027981(4),PHAGE_Pseudo_YMC11/02/R656_NC_028657(3),PHAGE_Pseudo_JBD44_NC_030929(3),PHAGE_Pseudo_PPpW_3_NC_023006(3),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(3),PHAGE_Salmon_SP_004_NC_021774(2),PHAGE_Pseudo_PMG1_NC_016765(2),PHAGE_Pseudo_MD8_NC_031091(2),PHAGE_Entero_PsP3_NC_005340(2),PHAGE_Salmon_RE_2010_NC_019488(2),PHAGE_Vibrio_VHML_NC_004456(2),PHAGE_Mannhe_phiMHaA1_NC_008201(2),PHAGE_Pseudo_D3_NC_002484(2),PHAGE_Salmon_Fels_2_NC_010463(2),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Pseudo_KPP25_NC_024123(1),PHAGE_Pseudo_H66_NC_042342(1),PHAGE_Salmon_SEN4_NC_029015(1),PHAGE_Burkho_BcepMu_NC_005882(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Erwini_ENT90_NC_019932(1),PHAGE_Geobac_E3_NC_029073(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Ralsto_RSY1_NC_025115(1),PHAGE_Burkho_KS5_NC_015265(1),PHAGE_Salmon_SEN5_NC_028701(1),PHAGE_Pseudo_phiR18_NC_041964(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Halovi_HGTV_1_NC_021328(1),PHAGE_Escher_P2_NC_041848(1),PHAGE_Burkho_phiE255_NC_009237(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Pseudo_PS_1_NC_029066(1),PHAGE_Burkho_AH2_NC_018283(1),PHAGE_Escher_pro483_NC_028943(1)   6                                25%                              65.29%                        
                                  3              44.5Kb                   intact(115)                   head,lysis                                   1040453-1085041          0                        52                      51                               1                                100%                             0                                yes                              7                                PHAGE_Pseudo_JBD67_NC_042135(40),PHAGE_Pseudo_JBD18_NC_027986(36),PHAGE_Pseudo_B3_NC_006548(35),PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(35),PHAGE_Pseudo_JBD25_NC_027992(29),PHAGE_Pseudo_FHA0480_NC_041851(7),PHAGE_Pseudo_JD024_NC_024330(7),PHAGE_Pseudo_PA1phi_NC_023700(5),PHAGE_Burkho_BcepMu_NC_005882(5),PHAGE_Pseudo_H70_NC_027384(4),PHAGE_Pseudo_MP38_NC_011611(4),PHAGE_Pseudo_MP48_NC_024782(4),PHAGE_Pseudo_JBD69_NC_030908(4),PHAGE_Pseudo_JBD88a_NC_020200(3),PHAGE_Burkho_KS10_NC_011216(3),PHAGE_Pseudo_MP29_NC_011613(3),PHAGE_Pseudo_JBD5_NC_020202(3),PHAGE_Pseudo_MP22_NC_009818(2),PHAGE_Rhodob_RcapMu_NC_016165(1),PHAGE_Burkho_KS5_NC_015265(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Pseudo_JBD30_NC_020198(1),PHAGE_Pseudo_JBD93_NC_030918(1),PHAGE_Aeromo_65_NC_015251(1),PHAGE_Acinet_Bphi_B1251_NC_019541(1),PHAGE_Pseudo_119X_NC_007807(1),PHAGE_Pseudo_PaP2_NC_005884(1),PHAGE_Entero_SfMu_NC_027382(1),PHAGE_Pseudo_JBD24_NC_020203(1),PHAGE_Rhodob_RcapNL_NC_020489(1),PHAGE_Burkho_phiE202_NC_009234(1)   30                               76.92%                           64.06%                        
                                  4              50.9Kb                   incomplete(40)                lysis                                        1086793-1137723          0                        56                      53                               0                                94.6%                            3                                yes                              14                               PHAGE_Pseudo_JBD93_NC_030918(25),PHAGE_Pseudo_MP38_NC_011611(23),PHAGE_Pseudo_JBD30_NC_020198(18),PHAGE_Pseudo_JBD69_NC_030908(17),PHAGE_Pseudo_FHA0480_NC_041851(16),PHAGE_Pseudo_JBD88a_NC_020200(13),PHAGE_Pseudo_DMS3_NC_008717(13),PHAGE_Pseudo_JBD24_NC_020203(13),PHAGE_Pseudo_MP22_NC_009818(11),PHAGE_Pseudo_MP42_NC_018274(11),PHAGE_Pseudo_JD024_NC_024330(8),PHAGE_Pseudo_vB_PaeS_PAO1_Ab30_NC_026601(7),PHAGE_Pseudo_MP48_NC_024782(6),PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(6),PHAGE_Pseudo_JBD5_NC_020202(6),PHAGE_Pseudo_LPB1_NC_027298(6),PHAGE_Pseudo_MP29_NC_011613(4),PHAGE_Pseudo_JBD67_NC_042135(3),PHAGE_Pseudo_JBD18_NC_027986(3),PHAGE_Pseudo_D3112_NC_005178(3),PHAGE_Pseudo_PA1phi_NC_023700(2),PHAGE_Pseudo_JBD25_NC_027992(2),PHAGE_Synech_S_CRM01_NC_015569(1),PHAGE_Pseudo_H70_NC_027384(1),PHAGE_Synech_S_CBS4_NC_016766(1),PHAGE_Sinorh_phiN3_NC_028945(1),PHAGE_Synech_S_PM2_NC_006820(1),PHAGE_Sinorh_phiM7_NC_041929(1),PHAGE_Pseudo_phiR18_NC_041964(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1)   15                               44.64%                           65.24%                        
                                  5              35.6Kb                   intact(100)                   tail,viron,capsid,virion,portal              1210244-1245872          0                        47                      46                               1                                100%                             0                                yes                              11                               PHAGE_Pseudo_JBD69_NC_030908(23),PHAGE_Pseudo_DMS3_NC_008717(22),PHAGE_Pseudo_JBD24_NC_020203(17),PHAGE_Pseudo_vB_PaeS_PAO1_Ab30_NC_026601(15),PHAGE_Pseudo_JBD93_NC_030918(15),PHAGE_Pseudo_H70_NC_027384(11),PHAGE_Pseudo_FHA0480_NC_041851(11),PHAGE_Pseudo_MP38_NC_011611(10),PHAGE_Pseudo_JD024_NC_024330(10),PHAGE_Pseudo_JBD30_NC_020198(9),PHAGE_Pseudo_MP42_NC_018274(8),PHAGE_Pseudo_LPB1_NC_027298(7),PHAGE_Pseudo_JBD88a_NC_020200(6),PHAGE_Pseudo_JBD25_NC_027992(6),PHAGE_Pseudo_D3112_NC_005178(5),PHAGE_Pseudo_MP48_NC_024782(4),PHAGE_Pseudo_MP22_NC_009818(3),PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(3),PHAGE_Pseudo_JBD5_NC_020202(3),PHAGE_Pseudo_JBD67_NC_042135(2),PHAGE_Burkho_BcepC6B_NC_005887(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Pseudo_JBD18_NC_027986(1),PHAGE_Pseudo_phiR18_NC_041964(1),PHAGE_Pseudo_PA1phi_NC_023700(1),PHAGE_Pseudo_MP29_NC_011613(1),PHAGE_Pseudo_phi297_NC_016762(1),PHAGE_Pseudo_H66_NC_042342(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Pseudo_SM1_NC_041877(1)   22                               48.93%                           64.25%                        
                                  6              47.3Kb                   intact(150)                   head,lysis,tail,terminase,portal,integrase,recombinase     1360339-1407667          0                        49                      31                               16                               95.9%                            2                                yes                              22                               PHAGE_Stenot_S1_NC_011589(8),PHAGE_Pseudo_MD8_NC_031091(4),PHAGE_Ralsto_RS138_NC_029107(3),PHAGE_Pseudo_D3_NC_002484(3),PHAGE_Cronob_ENT39118_NC_019934(3),PHAGE_Pseudo_PMG1_NC_016765(3),PHAGE_Shewan_1/44_NC_025463(3),PHAGE_Pseudo_PAJU2_NC_011373(3),PHAGE_Pseudo_F10_NC_007805(3),PHAGE_Entero_SfV_NC_003444(2),PHAGE_Stenot_Smp131_NC_023588(2),PHAGE_Rhodob_RcRhea_NC_028954(2),PHAGE_Pseudo_YMC11/02/R656_NC_028657(2),PHAGE_Pseudo_JBD44_NC_030929(2),PHAGE_Synech_S_CBS1_NC_016164(2),PHAGE_Vibrio_VHML_NC_004456(2),PHAGE_Entero_cdtI_NC_009514(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Pseudo_phi297_NC_016762(2),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(2),PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909(2),PHAGE_Pseudo_F116_NC_006552(2),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(2),PHAGE_Vibrio_VP58.5_NC_027981(2),PHAGE_Rhodob_RcCronus_NC_042049(2),PHAGE_Acinet_vB_AbaS_TRS1_NC_031098(1),PHAGE_Bacill_Glittering_NC_022766(1),PHAGE_Synech_S_CBS3_NC_015465(1),PHAGE_Mannhe_vB_MhS_535AP2_NC_028853(1),PHAGE_Pseudo_H66_NC_042342(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Citrob_Michonne_NC_028247(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Rhizob_RHEph04_NC_041908(1),PHAGE_Pseudo_LKO4_NC_041934(1),PHAGE_Verruc_P8625_NC_029047(1),PHAGE_Citrob_Mordin_NC_041977(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Burkho_phiE12_2_NC_009236(1),PHAGE_Rhizob_vB_RleM_PPF1_NC_025427(1),PHAGE_Pseudo_phiR18_NC_041964(1),PHAGE_Pseudo_MP1412_NC_018282(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Bacter_Lily_NC_028841(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Burkho_phiE202_NC_009234(1),PHAGE_Ralsto_RSA1_NC_009382(1),PHAGE_Bacill_Andromeda_NC_020478(1),PHAGE_Vibrio_Thalassa_NC_042095(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Pseudo_YuA_NC_010116(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Burkho_phi52237_NC_007145(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Pseudo_KPP25_NC_024123(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Burkho_KS14_NC_015273(1),PHAGE_Aurant_AmM_1_NC_027334(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Pseudo_B3_NC_006548(1),PHAGE_Mannhe_phiMHaA1_NC_008201(1),PHAGE_Rhizob_RHEph06_NC_027296(1),PHAGE_Altero_vB_AmaP_AD45_P1_NC_021532(1),PHAGE_Bacill_Curly_NC_020479(1),PHAGE_Pseudo_M6_NC_007809(1)   8                                16.32%                           63.54%                        
                                  7              46.7Kb                   intact(130)                   transposase,lysin,lysis,terminase,portal,protease,capsid,tail     2527903-2574641          0                        56                      50                               4                                96.4%                            2                                yes                              8                                PHAGE_Pseudo_B3_NC_006548(44),PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(39),PHAGE_Pseudo_JBD67_NC_042135(38),PHAGE_Pseudo_JBD18_NC_027986(38),PHAGE_Pseudo_JBD25_NC_027992(23),PHAGE_Burkho_BcepMu_NC_005882(8),PHAGE_Burkho_phiE255_NC_009237(4),PHAGE_Burkho_KS10_NC_011216(3),PHAGE_Pseudo_JBD93_NC_030918(3),PHAGE_Pseudo_JBD24_NC_020203(3),PHAGE_Pseudo_JBD69_NC_030908(2),PHAGE_Pseudo_JBD30_NC_020198(2),PHAGE_Pseudo_MP29_NC_011613(2),PHAGE_Burkho_KS5_NC_015265(2),PHAGE_Pseudo_MP48_NC_024782(2),PHAGE_Mycoba_PBI1_NC_008198(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Pseudo_vB_PaeS_PAO1_Ab30_NC_026601(1),PHAGE_Rhodob_RcapMu_NC_016165(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Pseudo_PA1phi_NC_023700(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Stenot_Smp131_NC_023588(1),PHAGE_Acinet_Bphi_B1251_NC_019541(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Pseudo_LPB1_NC_027298(1),PHAGE_Rhodob_RcapNL_NC_020489(1),PHAGE_Mycoba_Troll4_NC_011285(1),PHAGE_Pseudo_JBD88a_NC_020200(1),PHAGE_Pseudo_MP38_NC_011611(1),PHAGE_Pseudo_FHA0480_NC_041851(1),PHAGE_Mycoba_Gumball_NC_011290(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Rhodov_vB_RhkS_P1_NC_031059(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Burkho_phiE202_NC_009234(1)   43                               78.57%                           63.99%                        
                                  8              39.6Kb                   questionable(90)              lysin,virion,capsid,tail                     3060986-3100675          0                        56                      46                               10                               100%                             0                                yes                              12                               PHAGE_Burkho_BcepMu_NC_005882(27),PHAGE_Burkho_phiE255_NC_009237(27),PHAGE_Pseudo_JBD18_NC_027986(13),PHAGE_Pseudo_B3_NC_006548(13),PHAGE_Pseudo_JBD25_NC_027992(13),PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(9),PHAGE_Rhizob_RR1_B_NC_021557(9),PHAGE_Pseudo_JBD67_NC_042135(8),PHAGE_Escher_D108_NC_013594(4),PHAGE_Entero_Mu_NC_000929(4),PHAGE_Vibrio_X29_NC_024369(4),PHAGE_Entero_SfMu_NC_027382(3),PHAGE_Pseudo_JBD24_NC_020203(3),PHAGE_Burkho_phiE202_NC_009234(3),PHAGE_Pseudo_vB_PaeS_PAO1_Ab30_NC_026601(2),PHAGE_Burkho_KS10_NC_011216(2),PHAGE_Pseudo_JBD69_NC_030908(2),PHAGE_Pseudo_DMS3_NC_008717(2),PHAGE_Burkho_phi52237_NC_007145(2),PHAGE_Pseudo_phiCTX_NC_003278(2),PHAGE_Vibrio_12B12_NC_021070(2),PHAGE_Burkho_KS5_NC_015265(2),PHAGE_Pseudo_MP38_NC_011611(2),PHAGE_Bacter_Lily_NC_028841(2),PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(1),PHAGE_Salmon_SP_004_NC_021774(1),PHAGE_Rhodob_RcapMu_NC_016165(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Haemop_Aaphi23_NC_004827(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Pseudo_JBD30_NC_020198(1),PHAGE_Stenot_Smp131_NC_023588(1),PHAGE_Pseudo_MP29_NC_011613(1),PHAGE_Staphy_SA1_NC_027991(1),PHAGE_Pseudo_JD024_NC_024330(1),PHAGE_Salmon_SPN19_NC_019417(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Aeromo_phiO18P_NC_009542(1),PHAGE_Ralsto_RS138_NC_029107(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Haemop_SuMu_NC_019455(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Salmon_Chi_NC_021315(1),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(1),PHAGE_Pseudo_JBD88a_NC_020200(1),PHAGE_Salmon_Chi_NC_025442(1),PHAGE_Vibrio_VHML_NC_004456(1),PHAGE_Burkho_phiE12_2_NC_009236(1),PHAGE_Salmon_SEN5_NC_028701(1),PHAGE_Pseudo_MP48_NC_024782(1),PHAGE_Pseudo_FHA0480_NC_041851(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Pseudo_JBD93_NC_030918(1),PHAGE_Entero_Arya_NC_031048(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Cyanop_S_TIM5_NC_019516(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Aggreg_S1249_NC_013597(1)   27                               48.21%                           63.19%                        
                                  9              64.1Kb                   intact(102)                   lysis,head                                   3159707-3223828          0                        71                      65                               5                                98.5%                            1                                yes                              11                               PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909(50),PHAGE_Pseudo_phi297_NC_016762(39),PHAGE_Pseudo_JBD44_NC_030929(25),PHAGE_Pseudo_PMG1_NC_016765(11),PHAGE_Pseudo_D3_NC_002484(10),PHAGE_Pseudo_YMC11/02/R656_NC_028657(8),PHAGE_Pseudo_F116_NC_006552(6),PHAGE_Pseudo_H66_NC_042342(4),PHAGE_Pseudo_PAJU2_NC_011373(4),PHAGE_Pseudo_phiPSA1_NC_024365(3),PHAGE_Pseudo_MD8_NC_031091(2),PHAGE_Pectob_ZF40_NC_019522(2),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(2),PHAGE_Pseudo_vB_PsyM_KIL1_NC_030934(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Pseudo_AF_NC_019923(2),PHAGE_Pseudo_PS_1_NC_029066(2),PHAGE_Acidov_ACP17_NC_041997(1),PHAGE_Pseudo_vB_PaeM_G1_NC_041968(1),PHAGE_Vibrio_SHOU24_NC_023569(1),PHAGE_Pseudo_vB_PaeM_C2_10_Ab1_NC_019918(1),PHAGE_Entero_CC31_NC_014662(1),PHAGE_Mycoba_Rockyhorror_NC_042315(1),PHAGE_Flavob_FCV_1_NC_041845(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Edward_KF_1_NC_019420(1),PHAGE_Pseudo_KPP25_NC_024123(1),PHAGE_Pseudo_Zigelbrucke_NC_041904(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Pseudo_PaMx11_NC_028770(1),PHAGE_Pseudo_PA10_NC_041903(1),PHAGE_Rhizob_RR1_A_NC_021560(1),PHAGE_Pseudo_vB_PaeM_C2_10_Ab02_NC_042113(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Lactob_LL_H_NC_009554(1),PHAGE_Rhizob_vB_RleM_PPF1_NC_025427(1),PHAGE_Entero_PG7_NC_023561(1),PHAGE_Pseudo_phiR18_NC_041964(1),PHAGE_Pseudo_vB_PaeS_PAO1_Ab18_NC_026594(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Serrat_BF_NC_041917(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Pseudo_PAK_P2_NC_022967(1),PHAGE_Pseudo_KPP10_NC_015272(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Pseudo_vB_PaeM_PS24_NC_028882(1),PHAGE_Flavob_FCL_2_NC_027125(1),PHAGE_Salmon_epsilon15_NC_004775(1),PHAGE_Salmon_ST64T_NC_004348(1),PHAGE_Escher_121Q_NC_025447(1)   43                               70.42%                           63.64%                        
                                  10             46.7Kb                   intact(130)                   tail,head,portal,terminase,lysis,recombinase     5012533-5059292          0                        36                      22                               10                               88.8%                            4                                yes                              18                               PHAGE_Pseudo_MD8_NC_031091(4),PHAGE_Stenot_S1_NC_011589(4),PHAGE_Pseudo_F10_NC_007805(3),PHAGE_Burkho_Bcep22_NC_005262(2),PHAGE_Pseudo_H66_NC_042342(2),PHAGE_Ralsto_RS138_NC_029107(2),PHAGE_Synech_S_CBS1_NC_016164(2),PHAGE_Vibrio_VHML_NC_004456(2),PHAGE_Shewan_1/44_NC_025463(2),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(2),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(2),PHAGE_Vibrio_VP58.5_NC_027981(2),PHAGE_Burkho_Bcep176_NC_007497(2),PHAGE_Escher_vB_EcoM_ep3_NC_025430(1),PHAGE_Bacill_WBeta_NC_007734(1),PHAGE_Paenib_Harrison_NC_028746(1),PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(1),PHAGE_Bacill_Fah_NC_007814(1),PHAGE_Bacill_Glittering_NC_022766(1),PHAGE_Escher_Cba120_NC_016570(1),PHAGE_Rhodob_RcRhea_NC_028954(1),PHAGE_Synech_S_CBS3_NC_015465(1),PHAGE_Escher_vB_EcoM_ECOO78_NC_041926(1),PHAGE_Pseudo_YMC11/02/R656_NC_028657(1),PHAGE_Salmon_BTP1_NC_042346(1),PHAGE_Citrob_Michonne_NC_028247(1),PHAGE_Rhizob_RHEph04_NC_041908(1),PHAGE_Burkho_BcepF1_NC_009015(1),PHAGE_Bacill_Gamma_NC_007458(1),PHAGE_Paenib_Willow_NC_041867(1),PHAGE_Citrob_Mordin_NC_041977(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Bacter_Lily_NC_028841(1),PHAGE_Salmon_GG32_NC_031045(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Salmon_Det7_NC_027119(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Paenib_Fern_NC_028851(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Bacill_Andromeda_NC_020478(1),PHAGE_Paenib_phiIBB_Pl23_NC_021865(1),PHAGE_Microb_Ilzat_NC_042111(1),PHAGE_Pseudo_phi297_NC_016762(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Pseudo_KPP25_NC_024123(1),PHAGE_Pseudo_YMC11/07/P54_PAE_BP_NC_030909(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Salmon_SFP10_NC_016073(1),PHAGE_Rhodob_RcapNL_NC_020489(1),PHAGE_Pseudo_F116_NC_006552(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Aurant_AmM_1_NC_027334(1),PHAGE_Mannhe_phiMHaA1_NC_008201(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Rhodob_RcCronus_NC_042049(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Rhizob_RHEph06_NC_027296(1),PHAGE_Entero_Arya_NC_031048(1),PHAGE_Bacill_Curly_NC_020479(1),PHAGE_Achrom_JWF_NC_029075(1)   4                                11.11%                           64.62%                        
                                  11             41.1Kb                   incomplete(40)                lysis                                        5150841-5191979          0                        55                      52                               0                                94.5%                            3                                yes                              13                               PHAGE_Pseudo_JBD93_NC_030918(26),PHAGE_Pseudo_MP38_NC_011611(23),PHAGE_Pseudo_JBD30_NC_020198(19),PHAGE_Pseudo_JBD69_NC_030908(16),PHAGE_Pseudo_FHA0480_NC_041851(16),PHAGE_Pseudo_JBD24_NC_020203(15),PHAGE_Pseudo_JBD88a_NC_020200(12),PHAGE_Pseudo_DMS3_NC_008717(12),PHAGE_Pseudo_MP42_NC_018274(12),PHAGE_Pseudo_MP22_NC_009818(10),PHAGE_Pseudo_JD024_NC_024330(8),PHAGE_Pseudo_vB_PaeS_PAO1_Ab30_NC_026601(7),PHAGE_Pseudo_LPB1_NC_027298(6),PHAGE_Pseudo_MP48_NC_024782(5),PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(5),PHAGE_Pseudo_JBD5_NC_020202(5),PHAGE_Pseudo_MP29_NC_011613(4),PHAGE_Pseudo_D3112_NC_005178(4),PHAGE_Pseudo_JBD25_NC_027992(3),PHAGE_Pseudo_H70_NC_027384(2),PHAGE_Pseudo_JBD67_NC_042135(2),PHAGE_Pseudo_JBD18_NC_027986(2),PHAGE_Pseudo_PA1phi_NC_023700(2),PHAGE_Bacill_G_NC_023719(2),PHAGE_Mycoba_Arturo_NC_042339(1),PHAGE_Mycoba_HINdeR_NC_021308(1),PHAGE_Mycoba_Bactobuster_NC_031279(1),PHAGE_Mycoba_Timshel_NC_041983(1)   17                               47.27%                           64.70%                        
                                  12             54.3Kb                   questionable(80)              head,portal,terminase,integrase              5182976-5237314          0                        61                      46                               14                               98.3%                            1                                yes                              19                               PHAGE_Pseudo_F10_NC_007805(25),PHAGE_Pseudo_phi2_NC_030931(21),PHAGE_Pseudo_MD8_NC_031091(17),PHAGE_Salmon_ST64B_NC_004313(4),PHAGE_Entero_phiP27_NC_003356(4),PHAGE_Salmon_118970_sal3_NC_031940(3),PHAGE_Shigel_SfII_NC_021857(3),PHAGE_Bacter_APSE_2_NC_011551(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Endosy_APSE_1_NC_000935(2),PHAGE_Pseudo_KPP25_NC_024123(2),PHAGE_Bacill_PfEFR_5_NC_031055(2),PHAGE_Pseudo_YMC11/02/R656_NC_028657(2),PHAGE_Pseudo_F116_NC_006552(2),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Burkho_phi6442_NC_009235(2),PHAGE_Pseudo_phi3_NC_030940(2),PHAGE_Pseudo_phiR18_NC_041964(2),PHAGE_Entero_SfI_NC_027339(2),PHAGE_Burkho_phiE125_NC_003309(2),PHAGE_Burkho_phi1026b_NC_005284(2),PHAGE_Entero_P22_NC_002371(1),PHAGE_Acinet_WCHABP1_NC_041966(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Iodoba_phiPLPE_NC_011142(1),PHAGE_Pseudo_nickie_NC_042091(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Burkho_phi52237_NC_007145(1),PHAGE_Pseudo_MP42_NC_018274(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Lactoc_bIL311_NC_002670(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Pseudo_H66_NC_042342(1),PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Paenib_Tripp_NC_028930(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Psychr_Psymv2_NC_023734(1),PHAGE_Salmon_BTP1_NC_042346(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Erwini_ENT90_NC_019932(1),PHAGE_Pseudo_PAJU2_NC_011373(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Strept_315.4_NC_004587(1),PHAGE_Pseudo_JBD18_NC_027986(1),PHAGE_Klebsi_vB_KpnM_KpV79_NC_042041(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Pseudo_JBD25_NC_027992(1),PHAGE_Escher_TL_2011c_NC_019442(1),PHAGE_Entero_186_NC_001317(1),PHAGE_Entero_UAB_Phi20_NC_031019(1),PHAGE_Salmon_SEN22_NC_028696(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Acinet_LZ35_NC_031117(1),PHAGE_Pseudo_AF_NC_019923(1)   12                               40.98%                           61.60%                        
                                  13             36Kb                     intact(133)                   head                                         5643258-5679346          0                        45                      39                               3                                93.3%                            3                                yes                              8                                PHAGE_Pseudo_phi3_NC_030940(32),PHAGE_Aeromo_phiO18P_NC_009542(15),PHAGE_Haemop_HP2_NC_003315(10),PHAGE_Haemop_HP1_NC_001697(10),PHAGE_Pasteu_F108_NC_008193(9),PHAGE_Vibrio_8_NC_022747(9),PHAGE_Vibrio_K139_NC_003313(9),PHAGE_Acinet_YMC11/11/R3177_NC_041866(2),PHAGE_Strept_TP1604_NC_028818(2),PHAGE_Pseudo_phiCTX_NC_003278(2),PHAGE_Strept_YDN12_NC_028974(2),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Microb_Dismas_NC_042099(1),PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995(1),PHAGE_Serrat_Eta_NC_021563(1),PHAGE_Salmon_SP_004_NC_021774(1),PHAGE_Escher_Murica_NC_041871(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Escher_V18_NC_041937(1),PHAGE_Burkho_BcepIL02_NC_012743(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Coryne_BFK20_NC_009799(1),PHAGE_Stenot_Smp131_NC_023588(1),PHAGE_Clostr_phiCT19406B_NC_030947(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Entero_PsP3_NC_005340(1),PHAGE_Psychr_Psymv2_NC_023734(1),PHAGE_Sinorh_phiM12_NC_027204(1),PHAGE_Escher_slur16_NC_028248(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Salmon_SEN1_NC_029003(1),PHAGE_Erwini_ENT90_NC_019932(1),PHAGE_Salmon_vB_SemP_Emek_NC_018275(1),PHAGE_Ralsto_RSY1_NC_025115(1),PHAGE_Clostr_phiCTC2B_NC_030951(1),PHAGE_Burkho_KS14_NC_015273(1),PHAGE_Burkho_KS5_NC_015265(1),PHAGE_Escher_P2_NC_041848(1),PHAGE_Entero_186_NC_001317(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Escher_rv5_NC_011041(1),PHAGE_Entero_Arya_NC_031048(1),PHAGE_Escher_APCEc02_NC_041869(1),PHAGE_Burkho_BcepMigl_NC_019917(1),PHAGE_Pseudo_PS_1_NC_029066(1),PHAGE_Escher_pro483_NC_028943(1),PHAGE_Burkho_phiE202_NC_009234(1)   31                               71.11%                           64.25%                        
                                  14             7.6Kb                    intact(107)                   integrase                                    6165051-6172650          0                        12                      11                               1                                100%                             0                                yes                              2                                PHAGE_Pseudo_Pf1_NC_001331(10),PHAGE_Entero_186_NC_001317(1),PHAGE_Erwini_ENT90_NC_019932(1),PHAGE_Vibrio_VfO3K6_NC_002362(1),PHAGE_Salmon_RE_2010_NC_019488(1),PHAGE_Vibrio_VCY_phi_NC_016162(1),PHAGE_Vibrio_CTX_NC_015209(1),PHAGE_Pseudo_phi3_NC_030940(1),PHAGE_Vibrio_VfO4K68_NC_002363(1)   10                               83.33%                           61.57%                        
                                  15             51.3Kb                   intact(114)                   head,lysis                                   6437371-6488682          0                        56                      54                               1                                98.2%                            1                                yes                              6                                PHAGE_Pseudo_JBD25_NC_027992(42),PHAGE_Pseudo_JBD18_NC_027986(34),PHAGE_Pseudo_B3_NC_006548(34),PHAGE_Pseudo_JBD67_NC_042135(31),PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(29),PHAGE_Pseudo_H70_NC_027384(4),PHAGE_Escher_D108_NC_013594(4),PHAGE_Pseudo_JD024_NC_024330(4),PHAGE_Pseudo_MP38_NC_011611(4),PHAGE_Entero_Mu_NC_000929(3),PHAGE_Pseudo_JBD30_NC_020198(3),PHAGE_Pseudo_JBD5_NC_020202(3),PHAGE_Ralsto_RS138_NC_029107(3),PHAGE_Burkho_BcepMu_NC_005882(3),PHAGE_Rhodob_RC1_NC_020839(2),PHAGE_Pseudo_JBD69_NC_030908(2),PHAGE_Pseudo_MP29_NC_011613(2),PHAGE_Haemop_SuMu_NC_019455(2),PHAGE_Rhodov_RS1_NC_020866(2),PHAGE_Burkho_KS5_NC_015265(2),PHAGE_Pseudo_JBD88a_NC_020200(2),PHAGE_Pseudo_FHA0480_NC_041851(2),PHAGE_Pseudo_JBD93_NC_030918(2),PHAGE_Pseudo_D3112_NC_005178(2),PHAGE_Burkho_phi1026b_NC_005284(2),PHAGE_Pseudo_vB_PaeS_PAO1_Ab30_NC_026601(1),PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766(1),PHAGE_Rhodob_RcapMu_NC_016165(1),PHAGE_Pseudo_PMG1_NC_016765(1),PHAGE_Pseudo_PA1phi_NC_023700(1),PHAGE_Pseudo_DMS3_NC_008717(1),PHAGE_Vibrio_VP882_NC_009016(1),PHAGE_Natria_PhiCh1_NC_004084(1),PHAGE_Stenot_Smp131_NC_023588(1),PHAGE_Aeromo_65_NC_015251(1),PHAGE_Entero_EF62phi_NC_017732(1),PHAGE_Brevib_Sundance_NC_028749(1),PHAGE_Pseudo_PAK_P5_NC_022966(1),PHAGE_Burkho_KS9_NC_013055(1),PHAGE_Pseudo_LPB1_NC_027298(1),PHAGE_Vibrio_12B12_NC_021070(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Rhizob_RR1_B_NC_021557(1),PHAGE_Pseudo_MP48_NC_024782(1),PHAGE_Pseudo_D3_NC_002484(1),PHAGE_Salmon_ST160_NC_014900(1),PHAGE_Burkho_phiE255_NC_009237(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Mycoba_Adler_NC_023591(1),PHAGE_Entero_SfMu_NC_027382(1),PHAGE_Pseudo_JBD24_NC_020203(1)   32                               75%                              63.61%                        
                                  16             40.6Kb                   intact(150)                   portal,terminase,capsid,lysis,tail,plate,integrase     6654616-6695306          0                        48                      44                               3                                97.9%                            1                                yes                              9                                PHAGE_Pseudo_phiCTX_NC_003278(34),PHAGE_Burkho_KS14_NC_015273(14),PHAGE_Stenot_Smp131_NC_023588(9),PHAGE_Burkho_KL3_NC_015266(9),PHAGE_Ralsto_RSY1_NC_025115(8),PHAGE_Burkho_KS5_NC_015265(7),PHAGE_Ralsto_RSA1_NC_009382(6),PHAGE_Burkho_phiE202_NC_009234(6),PHAGE_Burkho_phi52237_NC_007145(5),PHAGE_Erwini_ENT90_NC_019932(5),PHAGE_Salmon_RE_2010_NC_019488(5),PHAGE_Salmon_Fels_2_NC_010463(5),PHAGE_Entero_phi92_NC_023693(4),PHAGE_Sphing_PAU_NC_019521(4),PHAGE_Burkho_phiE12_2_NC_009236(4),PHAGE_Escher_phAPEC8_NC_020079(4),PHAGE_Pseudo_phi3_NC_030940(3),PHAGE_Escher_P2_NC_041848(3),PHAGE_Escher_pro483_NC_028943(3),PHAGE_Pseudo_PMG1_NC_016765(2),PHAGE_Pseudo_H66_NC_042342(2),PHAGE_Entero_PsP3_NC_005340(2),PHAGE_Burkho_ST79_NC_021343(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Pseudo_B3_NC_006548(2),PHAGE_Pseudo_D3_NC_002484(2),PHAGE_Entero_186_NC_001317(2),PHAGE_Sinorh_PBC5_NC_003324(1),PHAGE_Bacill_SP_15_NC_031245(1),PHAGE_Salmon_SP_004_NC_021774(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Synech_ACG_2014f_NC_026927(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Burkho_KS10_NC_011216(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Pseudo_vB_PaeS_PM105_NC_028667(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Synech_S_SM2_NC_015279(1),PHAGE_Aeromo_phiO18P_NC_009542(1),PHAGE_Salmon_SEN4_NC_029015(1),PHAGE_Burkho_BcepMu_NC_005882(1),PHAGE_Salmon_SEN1_NC_029003(1),PHAGE_Mannhe_vB_MhM_587AP1_NC_028898(1),PHAGE_Rhizob_RR1_A_NC_021560(1),PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(1),PHAGE_Vibrio_VHML_NC_004456(1),PHAGE_Salmon_SEN5_NC_028701(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Mannhe_phiMHaA1_NC_008201(1),PHAGE_Vibrio_VP58.5_NC_027981(1),PHAGE_Burkho_phiE255_NC_009237(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Pseudo_Noxifer_NC_041994(1)   34                               70.83%                           62.59%                        
