gi|00000000|ref|CP047614.1|  Lactococcus raffinolactis strain Lr_19_7 chromosome, complete 2381691, gc%: 39.78%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(408964..410238)         PHAGE_Gordon_Mahdia_NC_042089: membrane-associated initiation of head vertex; GU337_02060; phage(gi100034)     9.05e-05            LactococcusraffinolactisMDNLYGRLLTRQELGDDFENLPKDTETFPGMSITPKSVTCHRCGTTSSLQAIKLEIPAYFCPECLHLGRVRSDELLYHLPQQDFPPQDSLLWSGQLTPYQAEISKELMAAVDQKTQILVHAVTGAGKTEMIYAAVARVISSCGAVGIATPRTDVARELHARLSRDFSIPISLLHAESEPYFPTPLVISTTHQLLRFRHAFDLLIIDEVDAFPFADNDALYFAAEQSRKPTATLIYLTATSTDKLDKLVKTGQLKQVSLSRRFHGNPLVVPKVIFSGSEKRIYRHIKKQRETGFPLLIFAPVIAFGQSFTERLRRLFPDEKIGFVASTSEERAEEIDRFRQGQLTILVSTTILERGVTFPKVDVFVVNSHHRLFTKSSLIQIAGRAGRSPDRSTGLVYFFHTGLTRDMTRAISEIRQMNRLGGFT
410282..410905                     YigZ family protein; GU337_02065                                                     N/A                 LactococcusraffinolactisMTITIKDDVIFEEEIKKSRFICHLKRVTTEEAAREFINSIKKQHHKANHNVSAFTIGDHQEIQRSSDDGEPSGTAGVPMLEILKKRELTNLVAVVTRYFGGIKLGAGGLIRAYAGSVNHAIDAVGLVKIVEQTQLDIDMDYGLFDNVSRYLTSAGLAIADSVFTEKVVITVFADTAELEQLKEDLTEQFHGKLELTIGDKKLVEVAI
410992..411341                     tRNA                                                                                 N/A                 GGGGTCGTTCTGGATTCGACAGGTGTTGTCGCGTATGAGCTGCGATTAGTGCGGCGCCACTCTAAACCGCCGCAGATAAATATAACTGCTAAAAATACACAAACTTACGCAGTAGCTGCCTAAACCACAGCCTGCGTGCCTGACTTTCGCTCGCCTATGGCGATTTGATGGCCTAATTTAGTAGGATACGATTTGACGGTGTCTTGACGTCAGAGAAGAGATTAAGAGACTCGCAAGTTAACTTTGTTCGAGGATTGTCTCGTTAGCTTGTTAAATTTAGACAGTCCCTATGATTGTAGACGCTGATATAGCAAGGCATTTGGACAGGGGTTCGACTCCCCTCGGCTCCA
411326..411342                     attL                                                                                 N/A                 ACTCCCCTCGGCTCCAT
complement(411474..412556)         PHAGE_Strept_315.2_NC_004585: putative integrase; GU337_02075; phage(gi28876262)     1.04e-161           LactococcusraffinolactisMEIKSYKKKDGTTAYSFEIYVGKENGRSKFTRKRGFKTKSDARKAIFKLQSELEKPEEKTDITFENLYNKWLSEYEKSVIDSTYYKTDRQFKNHILPDLGNKKIKDITPRMIQEFQNEWSNKLKFGRKLLGFVRSVFNYGIRLGYIDTNPAISVVAPKIKRERKEDKNFYDHEELKKFMSLAEKTGDIQKIALFRVLAFTGIRKGELLALEWSDLHDNTLEINKAISRSQSGLEVSTTKNRASERLISLDRKTIEILDNLREEYPNRKLIFESENGGVLSPSKPRKWLLQIIKDSDLKQITIHGFRHTHASLIFESGMTLKQAQHRLGHSDLQTTMNIYTHITQKAIDDIGEKFSKYVDF
complement(412679..413230)         PHAGE_Propio_PFR1_NC_031076: hypothetical protein; GU337_02080; phage(gi100027)      5.03e-39            LactococcusraffinolactisMGKRDEKVAKAKKPIFKKWWFWLIIVIVIAGAVGGGNKDETKETDTKKTTKVETKESKESKTEESKTESKQDTKSSEETPKVPTEYETALKKAESYSKIMSMSKVAIYDQLTSEYAEKYSPEAAQYAVDNLKADYNANALKKAKSYQDTMAMSPEAIRDQLTSENGEKFTPEEADYAIQHLND
complement(413329..414030)         PHAGE_Strept_315.2_NC_004585: putative repressor protein; GU337_02085; phage(gi28876261)     1.90e-62            LactococcusraffinolactisMENLLKTKRLEKRLTLEQVGKLVGVGKSTVRKWENGMIENMGRDKIVALSKALDISPLDILGIDKPQESTTKQILDNVFSKLETERQDKVVSYAQSELDEQNKENLVQLFPYNVQEKLSAGTGYGYFDDGNYDTVYYDEEYDYDYASWIFGDSMLPDYPNGDVALIKACPFEYDGCVYAVDWDGQSYIKKVYKEEKGLRLVSTNEKYSDKFAPYSEEPRIIGKVVASFTPLEK
414224..414451                     PHAGE_Brocho_BL3_NC_015254: gp33; GU337_02090; phage(gi327409425)                    2.62e-25            LactococcusraffinolactisMKSNVFLGLLKSKGKNVDWLSDRMIEEGEQVSRSTIYKKLRGVSEFTAPEIKTISKVMELSNDVMLDIFFEELVS
414474..415250                     PHAGE_Lactoc_BK5_T_NC_002796: hypothetical protein; GU337_02095; phage(gi14251162)     4.28e-104           LactococcusraffinolactisMNELQNFNFSGQDVRIITINDEPWFVVADIAKVLGASNSRSLAQMVDEEDKGKQSLHSGSDATIVNESGLYTILLRSNNPQAKPFRRWVTSEVLPTIRKHGAYMTDKKAQDILHGNGLADLLIQAGEQIKSLEFDKQQLQVELEEVREKTTYLDLILESPDDILTTQIAQDYGYSAVSFNRILHDLRIQRKVNKQWVLYSKYMGKGYIGSRTSDFVDSKGIARTSITTTWKQKGRKFLYEVLKKNGYFPLVEQDELVS
415316..415603                     hypothetical protein; GU337_02100                                                    N/A                 LactococcusraffinolactisMENMESSQIFGETFMNLLRELAKEAYLEGVKDGKESLKDRGFGTITEAQRRSGYGKAAITKLRDSGEISYIMNGAKYLYDLNDLHHYMQRNKERA
415859..416341                     hypothetical protein; GU337_02105                                                    N/A                 LactococcusraffinolactisMLNTECKQCHKKWHHDNAKYCSMCGNKLIDEPEFKVGDYVVDDGSYLMMKVDEASDSVVCSKICYNFRYFRVSINFVCETGYLRHATPEEIAEYESALHFYKHGREPFEVKKGDLIRTPSEKITLIWNPENYTKEEFLDYGWKLLKTAEEIDEWLGADDE
416334..416672                     hypothetical protein; GU337_02110                                                    N/A                 LactococcusraffinolactisMNEIKRFVADIDSNYSESIKYYAGRVEANGNITQSQLGAIRTFSIGMPVFSTDNKFLGYLGLRLWESLDYAIESNRTNRHKIPVEHWVIEGYRGNRMRIKTYWQVYGGADDE
416665..416925                     hypothetical protein; GU337_02115                                                    N/A                 LactococcusraffinolactisMNEEASQREQEEYAQFEAEQEELREIACAKYEDYKPLLDEMIKHSLDIGQIDMYELLIENKEKLEKLMRDSEWQEAITFMDKLLEG
416927..417328                     PHAGE_Lactoc_Q54_NC_008364: hypothetical protein; GU337_02120; phage(gi115304274)     1.66e-28            LactococcusraffinolactisMEFALLPVDLETGERIELTPSNIIQLGNDELANLTSNLKAMEKLKKEAEQEIKKRLDAGQKFTRLSYDDKTSYTRVLVLDAEAKKSLIKNYGLDSVEPLSIAKLEKKYGEGIYEKLQPFIVEKPRAKSIKWDA
417340..417915                     PHAGE_Strept_T12_NC_028700: putative single-stranded DNA-binding protein; GU337_02125; phage(gi966201500)     3.76e-41            LactococcusraffinolactisMSKLKFNELQNKMNLKKQKGQAVNYTYRSAEQILEHFKAQDSGWEVILTDDISEIGGKLFMKSTAIARDADEKHEAIGFAELSEVPILKLKAGGEKKQMTEPQWTGAVSSYARKYALQGLFGIADVDADELELQQEVIQKKEQVKKRDFPKEIKQAKTKDEVIKIAKEAKSFGLGQSILEAYTEKIKEFEG
417920..418372                     PHAGE_Strept_9871_NC_031069: hypothetical protein; GU337_02130; phage(gi100037)      4.43e-56            LactococcusraffinolactisMINNTVLVGRVTKDIELKQTQANKSVTQFVLAVNRQFKNANGEREADFINIVAWGKTAELLAQYAHKGSQIGVVGRIQTRNYENQQGQRVYVTEVVAESMTLLDSKGNNQNQQAQPQTQQSQNQTPDFGRNADPFSGGSSMTLSDDDLPF
418384..418539                     hypothetical protein; GU337_02135                                                    N/A                 LactococcusraffinolactisMTKEELIKSFERNNWELHDIYKAKLLALNYGELVDKLIHLKSQTAIVNFGG
418541..419287                     PHAGE_Lactoc_r1t_NC_004302: putative DNA replication protein; GU337_02140; phage(gi23455730)     1.57e-83            LactococcusraffinolactisMAQRRMFSKKIVETDYFMEMSPTAKLFYFYLNMSADDDGFVGNPKMIKMVSGATDDDFKILVAKQFILLFESGVIVVKDWRIHNYIQKDRYNKTQYTDEKSQLIIEENGTYTKCIQDGYGLDTQVRLGKDRLGKDSINNMSDKSDDVIPYSEIIDYLNKKTGRSFRNIDANKKLIKARWNDGYKLDDFKIVIDNMVANWSGKEFNGTPAENYLQPKTLFSNKFDSYLNQIPKTYVNNDYQGNELDLPF
419299..419691                     PHAGE_Lactoc_bIL310_NC_002669: immunity repressor; GU337_02145; phage(gi13095874)     4.69e-13            LactococcusraffinolactisMSLHEKVKELAKSKNNTLDVCSFDMGFSKNYLTGLKKHQATSDKIVIIADYFNVSADYLLGRIADKNSSCKHLDTIQTQEQTILNLEKSCDDYEKLIEKNKKDYDNLLNEYQKNKIDLNVYRKLVENMGI
419704..420582                     PHAGE_Lactoc_BM13_NC_021861: putative helicase; GU337_02150; phage(gi526244830)      7.68e-95            LactococcusraffinolactisMESIAEAMDKIMDHDKYAEVTSRILGNVEIKAFILEHDMQEREIMKSMPKFNEYLKDNEQFKDFSKKLVLNAGYAEVVYKETDESISRKKAHSAINRLKAKSLLLDETIKTATFENFKIETDEEKQAFEFAKNLAEFYKNGGQGNSFMSGPAGSGKSHLSMAILKSYLESGEKTALFVSYSHVVRLIKDSFSNRDSIYTQNNIMGLLTNVDLLVMDDIGSENNSDFSEELLTDVLDGRISTIITTNLSSEELRGSNTKIGKYNQRTASRMFRGIGGKAFNFKGIKDKRVLPF
420591..421022                     PHAGE_Lister_LP_030_3_NC_024384: DUF3850 domain-containing protein; GU337_02155; phage(gi658607650)     1.70e-11            LactococcusraffinolactisMKTHELKLDTKYFDDVKSGKKDFEIRKNDRDFEVGDILELKKYKSYKNGKKPHYVMTDSDSVLKTYNSDRADTIKVKVKSIIKAESWNMDKNFTDPLIFEGKMIFKYGISGVSKVLKDYFGSEYVPDGYVVMKIEVVPVEGNE
421019..421423                     PHAGE_Lactoc_ul36_NC_004066: putative RusA-like resolvase; GU337_02160; phage(gi21716088)     2.50e-54            LactococcusraffinolactisMKFAFEMAKMPTTNQQKGVKNINGKLVTYDRKGTKNQELVMNLVQNRPKVPFLDKNIPLKLSVTFFYAIKQKKKWGLPKTTRPDLDNLLKNLQDYMTKLGYYADDSQISCLVVKKLFSEKNLIQVEIEELKNDI
421413..421688                     hypothetical protein; GU337_02165                                                    N/A                 LactococcusraffinolactisMTFKFKIQPTPGSLFWTNVTKMLKENNESLRSVALHMRDGVNDKKTLALYDKLYRYKREAINPPNVLANGVLSYLKKFDEYLMFSDLYAEE
421693..422088                     PHAGE_Lister_LP_101_NC_024387: DUF3310 domain-containing protein; GU337_02170; phage(gi658607877)     8.72e-09            LactococcusraffinolactisMKLYHTQTREDYNALMDELESKGVKWADGKKPHELDGFEAYGSGTIFQVSNKEMVYFSMDFYKEIYNELEVIEYKAEKSEKDTKISNESVLEIIENLVHATSLKSFYSLQKAKYNLDKLIEKLEVEDDTKI
422072..422470                     PHAGE_Entero_phiFL2A_NC_013643: YopX superfamily protein; GU337_02175; phage(gi281416516)     4.51e-15            LactococcusraffinolactisMIPKFKAFLKETKQIVDVETIHFELGVVKVNGIELYQFEDIILMQSTGIYDKHGVEIFEGYIIQQVHAYDYDKLEIETDYLEPFEVKKGNYTQGKWVAEEIDEKHYSVVRYVFGKDVKVIGNVHENPELLGE
422474..422800                     hypothetical protein; GU337_02180                                                    N/A                 LactococcusraffinolactisMTFEEAIELIEDECRVEAEDGFSTKEKDLDTFLALSIIKNLEETYEAENQEVLKLKNKIEISKIFFQNILDVNPNVRIGSPSHLANCVHVMKNSAENALKRLEKGEDD
422793..423011                     hypothetical protein; GU337_02185                                                    N/A                 LactococcusraffinolactisMTEKQNPISQSWMYVILVLLCLFGVATLVSTLETNKLKSEQIRIYNRINNMEQSLRTKDKELERYLIKEAQK
423008..423133                     PHAGE_Lactoc_KSY1_NC_009817: gp126; GU337_02190; phage(gi157311130)                  7.74e-06            LactococcusraffinolactisMIRIKKIICKYFGHKFEVYPSDRDRFEMAGYCKRCGYDTHD
423146..423691                     PHAGE_Lactoc_63301_NC_031017: hypothetical protein; GU337_02195; phage(gi100019)     5.27e-10            LactococcusraffinolactisMSEFEKELEKNMELNKVAYTKESLYSDFLVSKRDIERIFHDWQPPKPLVVVPRFIAEWLDNKSAYIIATSPIPKEVLMWSQENTGFRDVAVNLSNLIEIKVNGYTVEKEQMFILKHIDMSKFSKGESLYLSRSINDDVFGKYNHRRLPDDADVSKIDNCHFTQSEIDELNIGSYEKIEVDQ
423727..423873                     hypothetical protein; GU337_02200                                                    N/A                 LactococcusraffinolactisMHGTSMTPEEYYKQDTEQVNKADKIAVKEFHTTIGIERNVNKKIMRKL
424122..424607                     PHAGE_Entero_phiFL1A_NC_013646: DNA cytosine methyltransferase; GU337_02205; phage(gi281416347)     2.87e-58            LactococcusraffinolactisMKPILDVCCGSRMFHFDKENQNVEYCDIRSETLKRPDKNSDRIIKVLPDTIADFRALPFEDNSFYQVIFDPPHLINVGDSSWLKAKYGQLNKETWQDDISQGFKECWRVLKPNGTLIFKWNDTDIDLAKLKKLFPSEPIIGQKRPKNKDGVYSHWLVFMKF
424856..425065                     PHAGE_Entero_vB_IME197_NC_028671: hypothetical protein; GU337_02210; phage(gi966198996)     2.64e-13            LactococcusraffinolactisMKTFILSEADIQSIINGRDVIKQDGNSKVLIRQSYVKDVVAPIIKDKFEVHNVEVENRIRNANNNYFRK
425072..425440                     PHAGE_Lactoc_98201_NC_031064: exonuclease A; GU337_02215; phage(gi100018)            1.80e-21            LactococcusraffinolactisMTVKNEIVTRVAPCGFSKSRHKKMVRNKIVKDISLEDIKNIGYGIGRAFKALADGLNRGINEDDDDIKCETCGKLIDCDCMQCHECNPSLSCDTCGFCHTDSWEAQDCWASENDLDYDPFDI
425476..425877                     PHAGE_Entero_phiEf11_NC_013696: phage autolysin transcriptional regulator ArpU family; GU337_02220; phage(gi282598742)     4.96e-09            LactococcusraffinolactisMDGLGLLYSDDEVSKAIDESKKVLRKYRQLKIAKKLKMPSVKSPTFSDMPRGGSGIGDTALDKYMDVISQMQQIERCVARCELLESIILQHKYLDDTDYSQWQLADKTGYSVRQYHNYLNRAYLQFATAYGIL
426139..426223                     tRNA                                                                                 N/A                 GGAAAGACTTGTCTATTGGTAAGACTAATTGACCTGCTAAGTCAATGGCGAATTTCGTTTAAGAGTTCGATTCTCTTTCTTTCCT
426778..426850                     tRNA                                                                                 N/A                 TGAGAATTAGTTCAGTTGGTAGAACGTTGCGCTGTTAACGCAAATGTCACAGGTTCGAGTCCTGTATTCTCAG
426973..427053                     tRNA                                                                                 N/A                 GGGAGAGTATGCAAGTGGCTAAAGCAGGCGGACTGTAAATCCGTTCCGATTGGTTCGTTGGTTCAAATCCAACCTTTCCCA
427119..427367                     hypothetical protein; GU337_02235                                                    N/A                 LactococcusraffinolactisMGTREFKTSDVYNSEQMTGNYSIQMVDRAIAELQSIKNMVVDKDIYIVDIVLTKPLFMDAFSLSRKHIVLDIEFEDLFKERI
427376..427531                     hypothetical protein; GU337_02240                                                    N/A                 LactococcusraffinolactisMILTIALLCSIIGGVVGYVIARYVVGKWISNLVLEKLQDVIDDFEYTNRKD
427589..427906                     PHAGE_Lactoc_bIL285_NC_002666: Orf39; GU337_02245; phage(gi13095719)                 3.49e-31            LactococcusraffinolactisMSDVKFYKSQRWLSKRDSILRRDKYECQNCKRYFKNKEAKTVHHIYFYEDYPKLSLVSWNLISLCNECHNKMHSRFDDTPTKLGISLQEKKKKEFESWLTPLLNQ
428003..428347                     PHAGE_Strept_phiARI0131_2_NC_031941: exonuclease A; GU337_02250; phage(gi100018)     4.92e-17            LactococcusraffinolactisMEKIPTERTIYDYTIKQMKALKVHDVAYNRIVGIYAGMLRQYYILVKDWEKNGCPATVESAAGSLKKHPSLDQIEKLRKDILSYSNQLMLNPKANNAGQIKEDDEPNPFANFIK
428360..430165                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; GU337_02255; phage(gi100017)     0.0                 LactococcusraffinolactisMEKISDNFLEAKKYADDLVSGNKLANIEQVQAAQRFIDDLKSDKWDFRSDQFDFVIGLIEGTIKHQQGQDLNGVDLSGTPLLLLPWQKFIIVNLFGFFNKGTSIRRFNEALIFLPRKQGKTAFSSALSWAKGVVDRKSGSKVYILANSIDQTKEAFGFLSYNLSLVRKGFKKFRLRDNNQEHSIKAEFSDGKIEVIAKANQEDKLDSFNCNGLILDEIHSWKKAGAKKYTLMKNAMKAYRNKLLVGISTAGDVANGFLAMRIQTLKKFLDGQINDPVYDSYFIFLCMAEQDKKGNILNPVTHEVTTIDDPQVLESLTPSLNQTTTLSELLADARQAMLEPQLKSEFLNKTLNVFTTAENAYFDIDEFKYSDSQFDWTVEELSKLPIVWYGGADLSKLHDLTAAALYGTLKDHKYTDSEGIEHVKNIDISITHAFFPRARAIEKAEVDNIPLFEWSEEGWATLSNTPTVLYDDVVKWFIDMRGLGFKIREVHFDKKFGREFFLKMKKAKFKMLDAPQYFYRKSEGFRHIEVKAKNAELYYVHSLAYEYCVSNVVAIEKTDDMIQFEKVLPNQRIDLFDASVFACVASLEAGESNQKKQAFLG
430175..431371                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; GU337_02260; phage(gi100016)     1.41e-124           LactococcusraffinolactisMALGFGKKRQVRSDPVKSEFVFVGSNEYNEMITDNYMRLSDSPEIRMGVERIVDMVSSMTIQLMKNTEKGDIRVSNKLSRVVDIEPNQYMTRKNFISWIVRTLLLEGGGNAVVRPAFNGIELQSLMPIPPNKTSFNLGDYDYTISVDSIEYDPSTLLHFSINPEPDKPFVGSGYKVSLKDLTDNLKQSYVTKKAFMKSEYLPSVIISMDTDTNELSSEEGREEIEKRFFKRKKVGAPWIVPQGIADVRTLKPLTLQDLAINEAVEIDKKTVASLLGVPPFLLGVGTYNKDEYNNFVNTRILSIAQSIQQTMNKLILDPTMYFNFNPRSLYNYSLTDMTTAGVQMVSVNALRRNELRNWVGMPPDPDMDDLLVLENYLQQKDIQNQMKLVQNQGKGGEE
431371..431973                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; GU337_02265; phage(gi100015)     6.02e-40            LactococcusraffinolactisMTNRGSLQVRDIGQLDNTQETTDSKIISGYFVVFNSETELYQGVYEEVSPEAFDSIDFSDVKALVDHDTAKVLGRTKASTLSLSVDDKGLYGEITVNENDQEAMNLYSRVVRGDVDQCSFGFEILNEEMIQNSDGTVKFIIKSLKLYEVSVVTFPAYQDTAVEARSKQIKEAQERTLQARKKNLKEKLDGIKTTYFSSQN
431936..433168                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; GU337_02270; phage(gi100014)     4.09e-83            LactococcusraffinolactisMALKQLILARKIDERSKKLTEYLEERSKLEKREGELSTALSEAEAPEEVEEVEKSADELEKEIKELDEKIEKLESEKSDLQKELDEANKGAEGTDNAEGGENRSMKKRQKVVTHEETEKTTQLRSAINAFVHSKGEQRAESKGLTSVEGGALIPEELLAPALVPEDVVDLKKYVNVIQVNTASGKYPVIAKSGTKMATVAELEANPKLANPKFTEVDFSVKTRRGYIPISQEIIDDATYDVTGLIADEITDQTLNTANADIATVLKTATAKSVVGVDGLKDVINVTIKRVYNVKLIVSASLYNELDKLKDKNGRYLLQDSITAASGKVLLGKEVVVLDDDIIGSKAGDLVGFLGDPKEFASYFDRKQTTVAWIDNQIYGKLLAGVARYDVKATDTAAGFYITYTNAPAGA
433346..433636                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; GU337_02275; phage(gi100012)     9.73e-15            LactococcusraffinolactisMNETEFKASALDLLKASLGYKSSVRDNLLTIIISGVIDELTSEKGILLDFDNSSHLMFVVDLSAFRYENKGGGMMPRNLEYRLRNLIIKFGGGSIE
433629..433940                     PHAGE_Lactoc_bIL285_NC_002666: Orf47; GU337_02280; phage(gi13095727)                 1.08e-21            LactococcusraffinolactisMNNWDLEVSLLQVDGYTTNKIGDKVPKYKAIELLAYEKPITRGELIIAGQSNIQISKIVVIHGFEYSNEELLEIEGVRYQVVSSYKISNEELELKLKSKKGGA
433940..434275                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; GU337_02285; phage(gi100011)     5.82e-28            LactococcusraffinolactisMDIADEIAKALSEYSEEVTENLEAIKKEVAEDTVEMLKRTSPSGRRGKYAKGWRMKKDGTGYYVHNATDYRLTHLLERGHAKANGGRTKAQPHIAQAEREAIEKIGVRIQT
434272..434592                     PHAGE_Lactoc_bIL285_NC_002666: Orf49; GU337_02290; phage(gi13095729)                 1.96e-24            LactococcusraffinolactisMNISELRETLGTLDIPVRYRAFNVGEVPSLPYLLYYTTDNQGTLKADNHNYAKAYNLTLELYSEEKDLELEEKLEALLDANNIEYDTFESYLDTESMYEVAYDITI
434604..435191                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; GU337_02295; phage(gi100009)     1.23e-37            LactococcusraffinolactisMPVKENKVVYGLKNVHYSKMTIDQTGKVVYAKPTAIKGAVEISLESKAELVSFEADNEVYYSAPGTSSYEGTLTLAKVPDLFLVDILGEVLDETDGVQTEIDGAKTSNFALMFQFEGDNSGVRHLFYNCSASRPSVASKTGKEIGTTELGFTASAKPSESANDKAIVKAKTTGSTTAAVYNAWFDAVYVKAPAAG
435259..435618                     PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; GU337_02300; phage(gi100008)     4.68e-12            LactococcusraffinolactisMEKTIEIDGKKVKLKSTAGTPKRYKAQFRKDYFSELLKLSKLMAGNDGEEFDLSKIDFADLDYLDFEVFYNFIWVLAKTANKEIGDPIDWLDEFDSMPIAEIFPEIIDLLESSISTKKK
435933..438695                     PHAGE_Strept_phiARI0923_NC_030946: hypothetical protein; GU337_02305; phage(gi100008)     3.38e-156           LactococcusraffinolactisMANKNIKGITIEIDGNTSGLDKALKSVNNSSVKLNSELKDVNKLLKFDPSNATGLAQKQELLTKAISNTSDKLNQLKSAQSQVEAQFKSGNIGEEQYRAFQREIATTEQSLKGYKSQLSGLQSEQEKLGQNTKRLNTFFEASGKSIDDFSDILGTRLVNSIKNGTATSDQLEMALNKIGKEALGAGTDLNEMKQSLDKVDDGGSIAGVKNDLESLKVTSNSTDEELGKLGSGITAGNMMQATQVVADVGEKIKEVATAAQDAFRDIDDGMDTFTTTTGQNSDVIKASFDKIYTSMPIESTADLGQALGSLTQQFGFTGDKLTGYGTQLMQFANINNTDVKSSVDNAKSAIETYGLSYDDLGSVLDTVTAVSQKTGVSVDDLMTKAVEGAPQIKALGLSFGEGTEMLGKFEQAGVDSSAALSSLSKANVVYAKDGKTLQEGLKGTIDSIKGAKTQTEALTIASEVFGTKGATRMVDAIQRGTFNLDELGGAAETASGTVKKTFESTVDPIDKQAVALQSAKLSFGELGATIAEGLQPILDALIPILKSLGESFANMPTFMKTAIVVIGGLAVAFTALAPFISSLMIVIPALGGAFTALGGFITATAVPAIGGLITAIIPFLPIIAGVALAIGAVILVIKNWGAIVDWLKGVWDGFVNWLGGLWDGMKETASKVWNSMKDTISDVCQSIADFVSGIWQGIKDTTSNVFNGIKDFMSGIWDGIKNMVSNAVNGVKNTISNVWDGIKNITSSAWNGIKSMITTPIEAAKNVVSGIIDKIKGLFNFSLKFPDVSIPHIPLPHFSLSGSFNPLKGQIPSIGIDWYANGGILTKPTIFGANGNSLMVGGEAGKEAVAPLSDLMAYVEKAVANQIGQMDSNFAQMIQLLTIIASKDMSLNMDGRSVMEIIDGHMNTQQQQQDFGIGRT
438699..439391                     PHAGE_Clostr_phiCT19406C_NC_029006: tail protein; GU337_02310; phage(gi971821558)     7.88e-38            LactococcusraffinolactisMGVIINNQNTKTLGFALVGRPTIPSAVKRYESTDVEGRDGSLTRFLGYEDLKFSLNFNILFQSDIKQKLREIKGVLAQAGTLSFDDSPNFYYKIKQAQISETESVIKASGVFSVEFIAEPYEYQKSTLTAYTTKPISLTNQTTTESLPIIKVTGTGTVVLTVNGTSITLTGLTSSITLDSELQEAYTGLTTNMNSNMNGNFPVLKIGSNTISWTGTVTKVEIDPKWRWLT
439388..443299                     PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; GU337_02315; phage(gi100017)      3.85e-92            LactococcusraffinolactisMITLFIKNETNFETNGIGSLDESIINPEINWKDNGAFTLEFKYPLFAKHGFEIENSSIIRANDPEGSNLFFVYKITPSMGYVTVLCYQISYKLAFNSINDTNIVNKSGQNALSQMSSATQYPHGFVFSSDISTTATSRVVRKNPIEFLLDTGLDNSFVNRWGGHIVRHNFNIAMNTAYGSNKGYTIRHKKDLTGYEAEFDESTVITRIRPIGYDGLLLPEKYVDSPLLNAYTEPRIQQFEYSEVKVKTKDTDEEGFSTPELAYAELRRLANLEFSKSKVDQPDFSAKVEFVNLKETQEYQDLRSLKQLLPGDTVKVIHSDDNFDIEAQMVEYKYNPLNNSYISITLGNYTKSFTSKVANTQTEISKVKETAQNALTSASGKNTVYSLTYKPPITASSTEGDLLYLKNGDKIELWILEKVDGKLQWVLQVSDATSEELKAQMQQAQNDIKDAVDSANLAVDKADASVTAIQANTQLINDVNAIANNAKTQANDAVTNAQTAITNAQTALEKANGVSSKVTTIETNIDTINGTLSSKANTTDLNALKGKVSTAESSITQNANDIKLKANQTDVNTIDGKVSSLDSSLTVQSGQITALNTKTDGQTTQIGSLQSSYNGLTSTVSSVVTGSTNETLISTQMISSTTLKHPNYPDMPMVEIPVVNGETYTVTSNHPLENNVAHVFYIRATTTQPLTAINGVYDGRGITLPAISDKIYVVFRTQGYADRFINGQYWLKVTKTPVSQIQVSQLSQDLSGFKTTVANTYADKSTVASQINQSATQVTQNVQSWTNGKLNSYSTIQSTDSSIASAVADKASQSQLTQLSNQFTSTVSQLSNSTNLFSIKRMQISNDYHSAYPSFLLVRVPTDIGATYIASTDNPSQNLWFLPDINSDPAALTYRVYKGKTVTFTATNTISYAVIRDTLTKEQLSNETYHLKIERGTRDTLWSPSEIDSVSRTQFTQSIDNINLRIVEKGNVTSQINLESGRVLIDTNQLLLNANTVKFSGSAFIPNAMIQELSAEKITAGTLNAANVNVINLNARSLTAGTISGSNLSINLDTGSVQFQKGYIAGNNNKIRFDLDNNYFHSLNSGGSGFKISDGQLSFFDGFFGSTPQYLGGITLDAFSSGFSGIKVYGSKGASIQGGGNAITVGYSLFGNDKIGISGNTGVTGNLSVMGNLSVTGSKNAVHVTRDGLRATPAYETAESYLGDIGGNYTRENCEVWVDIEKLFSDTVNTDVAYHVFLQSYDDARFWVAEFKSDKFLIKSDKPMARFAWEIKAKRRGYESDRLVIQEGFDNKMLLDAQEKGVF
443446..443673                     PHAGE_Lactob_PLE2_NC_031036: hypothetical protein; GU337_02320; phage(gi100019)      9.74e-20            LactococcusraffinolactisMALKTQQTVTITGTSEIDGQQVAYFSAQIPQGEGNSTISRSVTNQTLYDANRNQVRADEAEFQGKVYDIEDSLLA
443689..444087                     PHAGE_Entero_EF62phi_NC_017732: holin; GU337_02325; phage(gi384519787)               1.20e-54            LactococcusraffinolactisMEKYFNTASMLFGLVGGVITGILGGWDVLTHAIVVLVIVDYLTGIGKALVNKEVSSAVGFKGIFKKLLIFVVIAVSVEMQKIIGDGIPLREIVIMFYIANEGISFIENVSEFLPLPQKMKDIFIQIREKDGE
444176..444367                     hypothetical protein; GU337_02330                                                    N/A                 LactococcusraffinolactisMNLKELAKQAIENSETLNTSNEAKKRTAVAFINRELIESRQYTSDTLPTQEIDDTIEEVLHGN
444357..445205                     PHAGE_Strept_TP_778L_NC_022776: hypothetical protein; GU337_02335; phage(gi557428171)     2.43e-61            LactococcusraffinolactisMAIDNNKAISWFDIRKGLLTYSMYGSRNGTDGTADCSGSITQAMRDSGASPYAYLYSTVTLGSYLSANGYTRISENQSWDAQRGDIVLMSWGPSMAYSGGAGGHVGIMKDHDTFISVDYWTGGQVGTAVSEHDWDYYYSVNKPQYIEVWRQNGTAPQPTPSKPDASDTNAIAQFKAADNKFTAYNTFKVDDVKFHNGIWQFVSYQLNGSKDVNWDDNGIPLSVVDNVTRGNDADTQIGDTVKFSDAFNQGTIDEYHNETNAIGIDTGGYGRIWYNADAFLKI
445366..445584                     hypothetical protein; GU337_02340                                                    N/A                 LactococcusraffinolactisMTNEQVEQIMEEAVRGAYASQSEETLSQLGSVDDAVQSAIDGIDFSEVDGMTEKEAYDFYFDWTLDGIKSVL
445642..445830                     PHAGE_Staphy_StauST398_3_NC_021332: hypothetical protein; GU337_02345; phage(gi509141007)     8.67e-09            LactococcusraffinolactisMKNLIEQAESEIKELLDSNMTSYEIGKRSGISNQVIDRYRKGTNDIENMTFKTAKKLLELKR
445920..445936                     attR                                                                                 N/A                 ACTCCCCTCGGCTCCAT
446324..447187                     RNA-binding protein; GU337_02350                                                     N/A                 LactococcusraffinolactisMTDLNAIMATRITGKITDENDQNYYIQKDGLIFRLPKTEGDFTIGDDVTGFAYTDKAGKQRLTLTEPSATRDTYGWGTVTDVRKDLGVFLDVNIPEKDVVVSVDILPELKELWPKKGDKLYVKLNVDNKDRIWGELAYPETFVQMAGKAYDNMQNQNLHAIVYRNKLSGSFVYLPENNMLGFIHPNERFSEPRLGQELDVRVIGYREIDKTLNLSLKPRSYEMLDADAQLIMTYLEQQGGHMPFYDKSAPEDIKATFAISKGQFKKALGGLMKQGKIKQDETGTTLL
447184..447705                     PHAGE_Temper_phiNIH1.1_NC_003157: putative methionine sulfoxide reductase; GU337_02355; phage(gi16271776)     2.97e-22            LactococcusraffinolactisMSQERAIFAGGCFWCMVQPFEELPGILSVLSGYTGGTTQNPTYEDVLTHQTGHTEAVEIIFDNSIVSYGELVELYWTLTDPTDAFGQFQDRGDNYRPVIFYDNAEQQQIATESKAQLQASGRFDFPIVVAIEPSQTFWPAESYHQGFYKTNPVRYAQSSQLRHDFLAKQWGKK

#### region 2 ####
858661..859329                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; GU337_04285; phage(gi371496158)      1.84e-44            LactococcusraffinolactisMNAIEFKNVTKSFQDGDATIEALKNTNFSVKKGEFVAIIGPSGSGKSTFLTIAGGLQAPSDGEVLINGKTFSGKKEKERAKLRFDEIGFILQSSNLVPFLSVKNQLKLVDKVSKSKAMTKGGELLKQLGVASLVNKYPEELSGGERQRVAIVRALYHDPTIILADEPTASLDTDKAFEVVKILAEETKEKNKATIMVTHDLRLVDYCDKVYLMEDGVLREKQ
859676..860221                     acyltransferase family protein; GU337_04290                                          N/A                 LactococcusraffinolactisMKQEKKRNINIELLRILSMLLIVYHHYSVHSSWIFPNSFSKRTALINIIGNFGKIGVIIFVLITGYFYSKQRFSVKKIFQLSTIARWYTIPALVISFLFIEKGLHMSLQDIVKAIFPISFSEYWFLTSFVVILILQPILQPFLVSANRIQKLKMTGLVILLCHIPSFIGLVSQTDNYFSLV
860245..860763                     hypothetical protein; GU337_04295                                                    N/A                 LactococcusraffinolactisMVGDLIKSFEQELSNKYFKFVVLFFTGSLLLIIFKGVVYQPYIYNELPKIPYWFLNGTESINAIIFAGTTFIMIKKIKIKKSRFILFLSPLVFDVYLIHDNNYMRSLIWEKIFDNKNHFNSSFLLFRSLLEPLVVFSICILLAFFRGQISSFIAKMKKVSLPQISASDKQTM
860952..860964                     attL                                                                                 N/A                 AATGTCCCCCGCC
complement(861089..862132)         PHAGE_Lactoc_bIL309_NC_002668: integrase; GU337_04300; phage(gi13095806)             2.73e-67            LactococcusraffinolactisMPTKRDKVWQAEVSYKHHGTFKKWRKSGFKTKKEALIAESEFKLNIQKYLQKKYTLYEWFETWAEIYKKPSVSIRTYQKYINILVNIKKYFGDVRLDKIKNSGYQKVLNEFAKTHQKETVKTFNSRIRSSVQSAILDDIIKKDFTKGAILNGIDTKQQVFLNYSEFISFRNYTSKSTTTSTLALYLMIMTGLRFGEVAGLTWKDITTDKLSVNKSWNFYTNEIDTTKNKQSNRTIPIPIEVYNSILNLDKGQKYIFDNGTGKPITNNAAQKQLQAIMRKLEIDKPTIRPHSLRHTHASILLYNGVSLYAISKRLGHASILTTQETYAHMIEEMEVKEDDKILITLIK
complement(862249..862929)         PHAGE_Burkho_phiE202_NC_009234: gp9, Cpp15; GU337_04305; phage(gi134288743)          1.46e-52            LactococcusraffinolactisMRKVAILVDGGFYRKVSNKVMGTKTPSDRADELYTYCNRHLTYTNYGKKVHDELYRIFYYDCYPSDKVIYNPLTHENIDFLKLDSNKWAKDFFDNLSHKRKVALRFGELSDGTAGYSINNAATKALLNNKKKLEDLTQNDLSFSIQQKGVDMRIGLDIATLSLKQQVDKIILIAGDSDFVPAAKLARREGIDFVLDPLGHKIKDSLSLHIDGLNSVDSKYKQSNWN
complement(863244..863432)         PHAGE_Strept_PH15_NC_010945: hypothetical protein; GU337_04310; phage(gi190151418)     4.78e-09            LactococcusraffinolactisMKNDVKVIEHNLSCRCHRREETFEIEGKSFTVQYSAKSADSPPMSDHDKRVIADALKNYKNS
complement(863492..864232)         PHAGE_Strept_315.2_NC_004585: putative repressor protein; GU337_04315; phage(gi28876261)     6.33e-65            LactococcusraffinolactisMKTKDLGNKRIMSENIKRHLSQRGLNVKDFSIEMGFKYTTVLDWVNAKTYPRIDKIELMARYFNVDKSDLVEEYNPIKEKQSTTKQILDNVFSKLETNRQDKVVSYAQSELVEQNKENLVQLFPYNVKEKLSAGTGYGYFDDGNSDTVYYNKQYDYDFASWIFGDSMLPDYPNGDVALIKACPFEYDGCVYAVDWDGQSYIKKVYKEEKGLRLVSTNEKYSDKFAPYSEEPRIIGKVVASFTPLEK
864427..864438                     attL                                                                                 N/A                 AAATAAAAAAGC
complement(864619..865437)         TIGR02391 family protein; GU337_04320                                                N/A                 LactococcusraffinolactisMNIDNQDIESVSKILGEELSGSDITKMFLYLSFIDHDIKRGFTNTKWKRLNESISEKCVSTRKVRPLFDAIEYVSKPHRYINRQDSWSNLLNNINSTLIFKGYELKDDGRVHKTKVAQTFTEAQNRLKSLKEEIDTLNLHDNVTKYCTEELLNEDYFHAVFEACKGLFDRIRELSGLNLDGYPLIDKAFNIDKKPFQPKIFIKGNNLSNQDEKNQYYGLISSIKTCLYLYRNHQAHIPKIYDKLSLKDAMRGLISVSLAHELLDRCVSINDL
865609..865827                     PHAGE_Lactob_phiAQ113_NC_019782: Cro-like protein phage associated; GU337_04325; phage(gi446730266)     3.95e-09            LactococcusraffinolactisMTNDMKTYTLVQLRKGKQWTQKEAAKKLGVSDSTLSKWENATKYPTIDQVWLIEDVYDIPMSGINFLPNNTV
865858..866637                     PHAGE_Bacter_Rani_NC_029084: DNA-binding protein; GU337_04330; phage(gi985759364)     3.02e-107           LactococcusraffinolactisMNQLITITTNENDEQLVSGRELHKFLGIETKYEDWFPRMAEYGFTESIDYHALKIENVVNNRTYYKTDHAMKLDMAKEVSMIQRNEKGKQARQYFLEVEKAWNSPDMIMKRALQIADKRVIKLQNEKNQLLLESSVQKQQIAELQPKASYYDLVLQNKSLLSVSKIAKDFGRSAVWLNRYLHELGVQYKQGDIWLLYAKHQDKGYTQTHTHVIDSEKSRVTTKWTQKGRLFIYDLLKNKGILPLIERQEVVNSHKSVLA
866688..866879                     PHAGE_Lactoc_bIL312_NC_002671: Orf6; GU337_04335; phage(gi13095897)                  8.60e-28            LactococcusraffinolactisMPVDDHGLNLVNEFITTNGIEKMSLAAKYDVAKNVMIDTLSGRLRTPQAHKIILKIIDDFKLR
complement(867102..867374)         DUF3892 domain-containing protein; GU337_04340                                       N/A                 LactococcusraffinolactisMSKNKITHIHLSSEYEPTTDKITQVKLEDGTVESISQVVLYIDNNHFYYYVNSFGNQIEVETVHPNGILPYIRTKANSTTKDNLLSLPRF
867565..867750                     PHAGE_Strept_315.2_NC_004585: hypothetical protein; GU337_04345; phage(gi28876251)     2.20e-12            LactococcusraffinolactisMWIKLKKMLDEKQITTYQLSKLTGISEQSFSKLRNGLSKELSFSSMVKIADALDISLDEFR
867820..868080                     PHAGE_Lactoc_bIL286_NC_002667: Orf7; GU337_04350; phage(gi13095750)                  9.69e-09            LactococcusraffinolactisMFEEMLAELNTQIRSMILENVKDFISLEGQFPIMMTREETAKLIGISVNPFDEKYRYNSKKHFPKPDEMGRWNKFEVIEYFKKGIK
868077..868298                     hypothetical protein; GU337_04355                                                    N/A                 LactococcusraffinolactisMTQFEVSQHALLLANNEGQSREIKRLQVEAKQMRLAFRDLDLYCGQLEAENAHLKARLERYEMFETATKVWGY
868450..869268                     PHAGE_Strept_9872_NC_031094: membrane-associated initiation of head vertex; GU337_04360; phage(gi100034)     2.77e-104           LactococcusraffinolactisMTNQVMTTKSYFNTPAVQNKFSEVLGERSKQFVTSILSVTSDNKLLAKANPESVMKAAMKAATLNLAIEPSLGFAYIVPYGNNAQFQLGYKGLIQLAIRSGQIKNINSGIIYASQFISYDPLFESLKVDFSQEPSEEIAGYFATIELINGFKKLIFWGYDKVYSHGKRFSKSFNNGPWKTDFDAMAQKTLLKALISVYAPLSQEMEQAVVFDDKTEDKMSQPVDVTPDTSPDTLSDLIGTNTPEVTESSEPIEDLGVMVQPGQQTGLGIEDF
869270..870307                     PHAGE_Lactoc_50101_NC_031040: hypothetical protein; GU337_04365; phage(gi100011)     1.53e-39            LactococcusraffinolactisMIENNEIKVNYTPSVIEIDGRSEIEKEVSELVEKSKNYVVTVETITDARDMRAKLNGMFNTLEDRRKDVKNKINEPYDEFKKVVDEIEAPIIESISELDYKIKEADEVIKSERAEIVRNAFVEFTDKTEIDPRIFENRINEFVKAANFTKMNNLTKSANEGILAIVTDEVARIEKIKTDKQTISRFAELSNLSDTSYIRFYDQGRTVDEITKFIKDDAAAEAELDRRRKEREAAAKEAQAELDRKKQEYETSRLEKEMGVTDQPLTTPPVINQPSQSSQIIGKVDPVYHAPTNSPAPQQPKSNYPARLQITIDLESQERKDEFKALLTANGFGFKVDSFKTIGDE
870307..871107                     PHAGE_Strept_315.3_NC_004586: hypothetical protein; GU337_04370; phage(gi28876302)     1.78e-118           LactococcusraffinolactisMGKDLLGADYYSVESSRAYWSISQYKRFRECEARAMAELAEEWSEDRDSTPLLVGNYVHSYFESQEAHEVFKSENGSTMIAKTGATKGQLKKDFKIAEIMIQALQSDKQFSEYYVGEKEVAVTGVINGTDFKGKIDCLNIESGYFVDIKTTKSQIDDLVWSDEYRTKMRWFEAYGYVLQMAAYKELLYQQYGKEFTPIIYAVTKEDVPDTRAIVFQSDEKLKYELTELSTMISKLDAVKKGLAEATPCKHCNYCKSHGLTDKVEIY
871318..871509                     hypothetical protein; GU337_04375                                                    N/A                 LactococcusraffinolactisMENNIKHNVVIDPLEFFNKHDIVVKKLAYLDVNFRNKNMEFLVKDIEDISTYIKWLETQILGG
871511..872347                     PHAGE_Lactoc_Tuc2009_NC_002703: replication initiation protein; GU337_04380; phage(gi13487815)     4.74e-27            LactococcusraffinolactisMAKKRMFSADIVRSDLFLDLPISSQLLYFHFGMIADDDGIVASIKRELSYLGFGSLDDLKCLHDKNLVEFTDDGKILFIIDWRKNNSIRNDIYKPTFYLEARENLENKGFSFKGSKSVPSTLHERNGDVSLDKIRLDKDRLDLDIDKELVSGINQPTLDQIESISESEALRNIELNKKFKVYSDTYPKKTKKIEAREFFNRLSDDEIEKVIIGAQNVLKLSKTMSSEEYKYLKNQATFISDSEYLDYQASRNDKPQTPVGSRVPEWAKEEKKKVVREW
872341..872613                     hypothetical protein; GU337_04385                                                    N/A                 LactococcusraffinolactisMVKLADTAFTSELAKTYVELISHVVQDVTVEDYKAFTIYIESSDKNITLSPPNFISFLTGISQVKSVEYFLKFEKLNEKLSKRAALLNVH
872651..872866                     hypothetical protein; GU337_04390                                                    N/A                 LactococcusraffinolactisMPKQINITFTYEETEDSFRPIQTDYSLANHSILAFLIADIIYNETKEKSCFTEHIQDFLNKKVEECAHGSN
872853..873266                     PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; GU337_04395; phage(gi100031)     1.62e-28            LactococcusraffinolactisMVVINLDPYPSPRPRFTRQGRPYMPKEYTAWKKKFLKEWLTYGLDKFDAGVALKVELIFFIKPPLAISKVKKNKQALEDETIIVVKKPDLDNLEKSVLDSINGHAYEDDNQISELSSKKRYSLNPRVEIEIMEDEIG
873259..873693                     transcriptional regulator; GU337_04400                                               N/A                 LactococcusraffinolactisMARKKQELSRKTLARLEEEMRMYPKIPRLKAEALVTAELNRDTDVNWWIQGSRKKSEPPLDELMKKEGNKAYQYYDQLAKDIERTVSGLSPDLQKIIHECFWGMNNYLDWTTIGTIYLHVGVRQIYAVRYNILESFAIQRGISF
873873..874301                     universal stress protein; GU337_04405                                                N/A                 LactococcusraffinolactisMMHKQYKNILVAVDGSEQSYNAVYEAIEAAKRNGAKLTALTVKEVNRYYDEFDMSVVDISKINAVAESILCQVDKLNTDGVEIQEKAMFGDPKKAILKYAKENEIDLIFIGVTGKGVIDKFFIGSTTQYVVNHATCNVMVVR
874359..874790                     PHAGE_Brocho_NF5_NC_015252: gp1; GU337_04410; phage(gi327197585)                     2.44e-55            LactococcusraffinolactisMTMTEKQKKFCDYFIETGNATKAAIFAGYSQKTAKQIGQQNLTKLDLKAYIDERLKQLEDERIADAAEVMKFLTSVMRGEVTEPVAILDGDGYQKVVELKPSVQTRRSAAVDIGKRYALFTDKTEVAITEMPVFVDDIGEPDG
874783..876069                     PHAGE_Brocho_NF5_NC_015252: gp2; GU337_04415; phage(gi327197586)                     0.0                 LactococcusraffinolactisMVKKLSELIPKAFYSTWRATLNSSILNIVEKGGRGSGKSSDIAHIITQLLMRYAVNAVGIRYVDNTLEQSIYEQMKWAIEEQGVTHLFKFNKSPLRITYKPRGNYMIFRGAQNPERIKSLKDSKFPFAIGWIEELAEFKNEDEVMTITNSLLRGELADGLFYKFFYSYNPPKRKQSWVNKKYESSFQPANTYVHHSTYFDNPFISKEFVAEAEATKERSQLRYDWEYLGKAIGSGVVPFDNLQVVPGSITDEMAANFDNIRNAVDFGYATDPLAHVRWHYDKKKNGIYAIDEYYGQKISNRQYAKWLHEKGYASDTILADSAEPKSIAELKTEHNIPHIKGVKKGPDSVEYGEQWLDDLDFICIDPLRTPKIAWEFENIDYQTDKDGNPKPRLEDKNNHAIDATRYAFSEDMSTNKLQSFDISEFGFR
876078..877472                     PHAGE_Bacill_phi4B1_NC_028886: SPP1 family portal protein; GU337_04420; phage(gi971821256)     4.10e-106           LactococcusraffinolactisMLTFEESRKLYESHVMNRRLRLKQLLNAYKGNHDILRKANRKGKKDAKIVHNFPRYISTIVTGYTGNVNYTKMEDVQDLSDIFSFNSEPSVNSDHLLFMSIYGESYELQWLDEQGNYCFEAVDPMNVMVITDGKIRESVTDAIVFDEDDLKGNKIKVTMTVYDDTSRRVYSYTRTRSSFNTIKSEINVSSLAEEDEEPHKIGACPVIQFKNNRWEQGDFEPIITMNDAYNLSVSNSVNDLTDNTDAMMVFRNLNATTPEDIRQAKLNGGFKVNDGGDVTWLVKNINDAYAENIKNRLDSDIHKLSFVPDMSDQNFANNASGVAIRYKLLGLEQIRLEKVKWMKKALFKRLQMISGFLSTKSEVFDPLTIGITFKANLPQNSQEIAQFVQMLNGITSKSTQLTQLGDDIVPDVKAELETIAEEQENASNNGFNFASVGQEVKANGEDDLLATKATESAAQSLQRE
877405..878952                     PHAGE_Clostr_phiCD119_NC_007917: putative head protein; GU337_04425; phage(gi90592642)     8.22e-26            LactococcusraffinolactisMAKMTYWQRRLQNPLHKAYNENEQATRQWLSVYQQASKDIKAEIFDTYQKLNIEKPLISDFYRYNNLQKIEKQINDSILQLGTKEVDYTKQSLQHATLVGSQAAADVLNTNVLNKSAIDELIKRPWHDANFSDRIWKNKAQLINSLKSELTNGIIQGKSIYEVANTIDARLDVGRSQTQRLVRTEYMHALNQGQIESYRAKGYTKLKWIATMDDKTSKICRKRNGKEYDIERLPDIPAHPNCRCTMVPVIDMAAAEKRGDEIRRLKDKISGKTDVNSLDKVYNDDREMFPREFRHQNLTRDILIKKLKDDFKMDIVETSRTRLSDIALNQVHNILDNFKVLYNALPQKIPKIEAISASKAKDAIAFYSRTAASSTPVKFGINVKFFKTPDSLQEVVDRSMKSGWFSKNGDINHVMIHEFGHHVDFQLSKMMGGNFSDRVFSNMVNNYGDKYDLINLSNNIGGYANSYYRKFGKQTESFAELFAEAYGSTPREIAVDFRTEFEKIAKELINNASIT
879186..879434                     PHAGE_Lactoc_ul36_NC_004066: hypothetical protein; GU337_04430; phage(gi21716112)     1.56e-48            LactococcusraffinolactisMDELKFTEKAKQMVADYSNKKNKGRTKPLEVYVVWLCKTLQNNKALLSTDEPDGRYYEVTYNGDKQEFYFDAYIKEHNQLIK
879552..880130                     PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; GU337_04435; phage(gi100015)     3.50e-10            LactococcusraffinolactisMKQQQLLPMNLQMFAHPTDPVDPAPQNPPADPVEPKDPTDPKTSDPAGSDKKYSDTDVDKIINEKFAKWQSDQEEKERVSKLSAAEKEQDRIAKLEKLEQDVAKRDAVDKSRKLLSDEKLPETFAKFIADTKEDVSQEKFNEFKGLMQAFKDSIVSEIMKDKTPAKPKVAGEGNGSDWRSKAQQAYEKSKGE
880134..881033                     PHAGE_Lactob_phiJB_NC_022775: major capsid protein; GU337_04440; phage(gi571797882)     2.84e-95            LactococcusraffinolactisMPVILDSKDLAQVDQEFAAESQVWEVLKGGASDITDADFTGAKEVRINKMKGFTASDYQRNETNARAKIDVSKETVKLEKERWMAYDLDVLDQSENGSYNVAAVIEEHSRLIATPEKDKTAVQRLIEAAFKSAESDDIEGKYVGKTVIETITTANSLTAYDAAETYMTDAEVVGPFVMFVSSDYYNALKNNDKVSKSFTVNEAKINGINRKVAQLDGDVPIIKVAKSRLQVDATKKINFILVPLHVAAPIEKYNDVTLIPASQDRDGNRDTIKGTDYYDLIVLQKARPAIYVSYEKVGA
881051..881332                     PHAGE_Geobac_GBSV1_NC_008376: hypothetical protein; GU337_04445; phage(gi115334631)     1.63e-05            LactococcusraffinolactisMAYKVVQAFTDLKDGDKVYRVGDIYEGEDPKRIKDLLSNDNKGRHVSLKGKPLIESDGEQTEALETPEVPVIPEDEAPENPEDEVKAPKKGKK
881341..881667                     PHAGE_Entero_phiFL3A_NC_013648: hypothetical protein; GU337_04450; phage(gi281416262)     1.22e-07            LactococcusraffinolactisMIETLLERLKARLDENELSDGKLQGIIDDVTIEVLANTNQPILNTQLESAVISLSVVAVNRIGTEGLASEGYSGVSTSYLDDVPPRVASILNANRRLGIWEDEDEPTS
881651..881977                     hypothetical protein; GU337_04455                                                    N/A                 LactococcusraffinolactisMNPLRKRLVFDLYKSTPVRGPSGSLKDGWVKQDNQIAVSLYDQSAQNQLTFGSSGARVKQYDYLGLTKKKTLIAGKYRLERDGVKYFVKGVNNEGRLAQLFLEVIANG
881970..882383                     PHAGE_Bacill_BMBtpLA_NC_028748: hypothetical protein; GU337_04460; phage(gi971482488)     6.80e-19            LactococcusraffinolactisMADTRAFEQACDEADKLVLDILVQNMELALDHVAEKAKEKVGVNTGALRADTRSLGVEIVGDEVRGAVGNSLEYAIYHHQGTGIYAANGNGRKTPWVYEDPKTGEKIYTRGSKPNPYLKDTIEQEQSTLSKLLGGAN
882383..882754                     hypothetical protein; GU337_04465                                                    N/A                 LactococcusraffinolactisMLQGYQVKQLIERQYPELTDKIYPSFSTTVEDISIIYFISTATGGYVGQDTLEIRCIHPDYDTAESYKKKMIDIFSTEKENKAVVLPDIAFTGAVSGGGAMFNDTYQTWELTTFFVLKTKERN
882756..883310                     hypothetical protein; GU337_04470                                                    N/A                 LactococcusraffinolactisMAETTLTPNDIILGAGELYLTEFTGSAIPDNATIETVSNNVGHTSGGAEFTYKPTVYDVENSYGKVVKRKITKTECSFKSGILTFDPDKIGLLTNATIAEDTVKKVSTITFGANNPLKNVLVRFVHTKDDGKNIRLTMVANATNGFTMSFQGGKETVIDAELSAIEFIKNFMAEIEIELPTAGA
883361..883651                     hypothetical protein; GU337_04475                                                    N/A                 LactococcusraffinolactisMVINLQELNEKSLDFLWIDGAEIHCPMPSVRFVNKVNRSENTFEKANELALEFLNTNKEKRVFTLDEVIELSSVQLAAILGAVVGVISEVDEHPNL
883678..883965                     hypothetical protein; GU337_04480                                                    N/A                 LactococcusraffinolactisMNALVDKYFQKEQWEQELTSNTSDYKAVADYSGVPLDKVQDLPYSQYKLYLRDAWLSNMSKSDDGRKFLETCWRIRQTSADEKAIEKYQRYGGDV
883965..888098                     PHAGE_Strept_315.1_NC_004584: tail tapemeasure protein; GU337_04485; phage(gi28876187)     2.89e-46            LactococcusraffinolactisMAGFIELATLKAPVVADAKGFKTGMSIVKKEGKDAANEIEKDFQNASKKAAISWENASNKIQKSLKTTENDAKELTKSAENIYKDGFGKSANDVIKSLMQTKRALGDIDSKELETATKRALELRDTMGVKMSTTLKMAKQEMTAYGSTADQAFDRVNKKLEQNQAAWDKVGRSGEKLSTLGVALTAGITTPLIGLGVATGKMASDFESANARVVSSLGLTEQQSAITKQAIQDIYSDGFGESIDDVAESLIQVKRQLGDIPDDQIKKVTENAMVLRDTLGQDMGESLRGINSLMVNFGLSADDAMDLYVKGIQTGLDKTGELGDNLAEYGQLWSQAGFNAKDMFAVLDNGLKSGAYNLDKVNDFVKEFAISLNDGRIEKNLGSFSSGTRDVFAEFKAGKKTSQDVFKSVISDLEHTTNQQDKLALASTVWSALGEDNAMKIIESLNDVNGTYDNVAGTMEKVKMQQNETFGARAKSTFREAQTALLPLGEALLDIAEKYMPQLQKSVKSLSDTLSNLSEGDIDRILKIGGFVAIAGPTVVGISKVTSAISTVGGALKLGAGALGLFESSAAAAGGAAGVGGLGASLVALAVPAAIAVGAIAAVGVAAYAGTKAYEAHQLAGAKWGTEVTKAQDKVITKSYELNEKAKADVAAYADGVKSSAKDVVKSNNAIVDSIEKTITKEKERREKAAAKLTDPEMKKDAEDYAAYKAKLDKKTLDSAKETVNNINKIMTDASQNNRNLSTEERNYIAENYRSLSDDQLKAAGFTKDKRVAIEAAYQKDLSKLSDKQLADRERNVVDGLKKEKSWYDKQKEALKANYTEGTVSYEKQVDKLDKLNHKNTESMILGLAKINKAQGFAVGDMSDTWKRYGWSVKEVEKLLKDSGKNSTKDAENLGKILKTMGRDWDSIELDPKTGKLTVEGKEELVQSLLETSKWKTLSIDEKKLLVDGDESRVAFLDSLSDAKKWNQYKILEKELGVNNSKAIQAIMEAEDGVNRWNSLQPADKEFLAKNDKVLKVVLSSEQALQRYKDFPPAEQELLANNQDLLAKVLESEENLNRWNLLPAADKEFLAKNEKLLNTVLSSDEALRRYNEFPPAEQEFLGDNTDLLNVIVGSQEAFDNYSRLEPDEKQFIADNKDLINKVLTGTGSVEEFNQYPALMKLFNGVDATGQPVAFAKGNIDSFNQTKANPVILSADNQASSVINGVLVDLDKLPKYRGISIGIERVGGGEKLPFASGTSGLPKDQWALVNDQKGALYEELITLPNGFSFIPKGRDVMLPLPKNTRIDKASDTEKIKRMIPHFANGVNNQQPLPFIGYNATFKPTSVSRVDTSSSVLDPGTSKVIQLLQLIYEKDVDVILNGKSVLDYFEKEMTRRSRV
888099..889499                     PHAGE_Lactoc_1358_NC_027120: putative phage structural protein; GU337_04490; phage(gi824479770)     4.35e-14            LactococcusraffinolactisMIFGTNLKIYNAKNDLVDLDDLDSIFSVSPEGFGAAIENNIFNAGASFKSSGVDMKASSLKLNLYFGLGDDKSEMVEYQKFVEFLNYPPYRLVYITEGIELFRDCILNEITKSDINTNQVLLEQVIFDFLTPFYKEISETYKPNSDTEGDGKIYAGDSKPRNLILNPNFLNNMESWDNMSDPEGTYQLQAPATDKPNSNILKLTSSNNKLSSFINAWGLKVRKGDRLSFRVDIKAENNPDYDRPVIRVGYGTGEKNYKYSDFGITASSSGFKTAAISFVVPEDGVFQLYLINQNWSTIGEMSTYFREPMLIRGDVSDIPADFYSGKPSNNYYVYPYVYESDYNGQSGVFQIENKSVYIGSAKGSPVEITVHGPCTNPYWEILDGSKVIQSDGYNIDVPEGYKLVVSSIVQNQRMKLIAPDGTTSDVYQQQDLSRSNLIAIPEGHVTLAFHNVGDVSFVYREEYITV
889496..890539                     PHAGE_Lister_P40_NC_011308: gp16; GU337_04495; phage(gi207270790)                    3.67e-40            LactococcusraffinolactisMSEQVNIWIIDRKGAITQEPIVVSKAAIQPDYITQDSSTFELPEDASFVRGDFILAKVMYSSMVSFFGVISSYEDKKVVAKDLLGLVNFEFPATRMSGSSFEQHFKNLVNRYLLQDASKDLNILDIEVKTNTQHIYQPDEPPKATNLMSYAINGFKKYNVVWRFDKFENGRIKTVIEAVTDTIQLKDNIADFQDWEVSTTEVGKNTQNHLLIVNKNTTNSEGPNVLAERYLTTNNDITSNVNDPAVYKPTTTKVAIYDTTATDKPSYDDLANSELKGNYYSHEIAFTMSKDNEFFSVEKLKLGMLATIYKSGKIYKSVLTGYEYLSDSDRVKLKFGHVKSRLSELLN
890552..891340                     PHAGE_Lactoc_BM13_NC_021861: base plate; GU337_04500; phage(gi526244867)             1.55e-21            LactococcusraffinolactisMTLQGYQFDKAKVTPEADAQLYSYLAQSSDNKVISGLTATATGLNVYLASGKALVQGRLVEVTQQHQLTAQANKSGYICITVDLTQTNTSTGTPGTSNYVPVNNQLRLELVDTLNQQDLNSGGGLIYTFPLYSYVSTGTSVSLTKTDRGFDNATIAYFSSTGTDITFTAPWDCTAEIYLTLHGWGFGGGEWGIGVNTPAGITKLYEAIGYTEGHNGQAVAMPASAGFSNLRKGQQYSFSRNDVLGQAGGLKYTSAVAKLNRI
891391..891792                     PHAGE_Entero_EF62phi_NC_017732: holin; GU337_04505; phage(gi384519787)               1.07e-56            LactococcusraffinolactisMEKYFNTASMLFGLVGGVITGILGGLDVLTHAIVVLVIVDYLTGLGKAFVNKEVSSSVGFKGIFKKILIFVVIAVSVEMQKIIGDGIPLREIVIMFYIANEGISFIENVSEFLPLPQKMKDIFIQIREKDVNK
891789..893054                     PHAGE_Lactoc_ul36_NC_004066: putative lysin; GU337_04510; phage(gi21716129)          8.23e-174           LactococcusraffinolactisMKKIKKTVAVLAIGLGLFAYANPAFAAVGDQGVDWAVYQGNQGQFGYAHDKFSISQIGGYNGQGIYWQSTYASQVQSSIAQGKRAHTYIWYQSVTNTTLAKNILDTMLAQVQTPKGSIVALDVEDGVANTDVILWSLEYIKDRGYTPLLYGYKHFLTNNLDLKRISDKFGLWLGEYPDYNVTPVPNYNYFPSWDNIQIFQFTSTYVAGGLDGNIDLSGVTDNGYKNGNPSKPNTETPAIDAGKEADKVKGNAKEVGMTVKVNFSSQTYATGEAIPDWVKGTSYQIIEKSGDKVLLDGIMSWLSVYDVETLDASTAAPATNVSQTHIVQYGENLSTIAVQYGTTWQELARINALSNPSIIYAGQTLSVTGGQSVAKSSYCVVEYGDTLSSIAAQFGTTVEHLVLANGISNPNLIYAGQVLNF
893359..893682                     PHAGE_Lactob_LfeInf_NC_029058: hypothetical protein; GU337_04515; phage(gi985757346)     9.49e-14            LactococcusraffinolactisMSNIHAVIYTKPHCMPCKMTTKLMDSLGLHYENTYYGNSEQTNSIELDSHNEVKRTWSEKKVEKLKAKYNITSLPFIKIIDDETEEELEFWSGFRPEKIKKWNSEMG
complement(893845..894972)         PHAGE_Lactoc_bIL309_NC_002668: integrase; GU337_04520; phage(gi13095806)             2.01e-144           LactococcusraffinolactisMARYTKRGKVWQYEISYKTKDGKYKKLRKSAFPKKADAILAASEMEIKLGKGFAINDKDVLLSDYFRQWIKIYKKGKISDVTFLKYENILMNIEKYFKYATVKSLTRTRYQEVINQFSKTHATPTIERFNSTIRASIVNLIDEGVIPLDFTKNVVIKGETEVKKEKDKFLNFLEFKRLMKSAKSRINPKYPSNFMIFIAGMTGMRFGELLGLTWDNINYDKKYINVCQTWDYHLNTGFASTKNEQSIRKISIDDSTLEVLSNFQAEQTKFFRSLEMTNRHHLVFSNAVTQAISNNAINKQLSKLCKQSGIDTPLTLHGLRHTHASVLLYKDVNILAVSKRLGHKDLSITMSVYSHILKELEEKENKHIASILEEI
895304..895987                     DUF3800 domain-containing protein; GU337_04525                                       N/A                 LactococcusraffinolactisMNLYIFSDESGVFDKVHNDKFVFGWLLFVDKKSKDSEHRKYLAAENVLRAKYPKKDELKASIVTNRDKGKLFRSLNKSIKGAVIINQKSVLNSIYCDKKTKQRYLDYAYKIGLKRHLEFLIIEGKINPNEVENMTFSVDEHTTATNGIYELREALFQEFKHGTYNHQWNKHFPGIFPNLKSLEVRFCASDKVPLVRGADIVANKVYYNSINDSLPNISNKIFLIKQP
complement(896108..896503)         PHAGE_Lactob_Lv_1_NC_011801: hypothetical protein; GU337_04530; phage(gi219563221)     3.44e-08            LactococcusraffinolactisMTGHLFGDGNFKMPYRNITNVEVNYGFGGGYFEVSAGGIQNTDKNYWSTNKKQDPAKQPNTISITGSQLKEAFSYASSKILDRINNQHHSQQIAQQQTSSAEEIMKFKQLLDDGIITQEEFEMKKKQLLNI
complement(896673..897122)         PHAGE_Shewan_1/40_NC_025470: hypothetical protein; GU337_04535; phage(gi722121091)     7.59e-06            LactococcusraffinolactisMIECKNCGRFISPDNGYCDYCGQKISDEDIQAYQQKKLKETSEQENKQKDIKRYDALLDTKSKRIIEFFKVFNILLAVINALGALVVFFVTVNFMSLPARITIFIMGLGYASLLFMMIEMLTKHFSNVAQIKEINYQLFIKNKNEVSNG
complement(897289..897891)         hypothetical protein; GU337_04540                                                    N/A                 LactococcusraffinolactisMKKVIIVGSSLLCALFLSGCSDNNAEINKLKVENTSLKKQINELKGKTSESTTDNNSKEKNTYGLNDEAFIIKSSTNEKMYGLKIIKATTLLEDSSDLYTDGKPENTVQVTYEYTNYKMPNPMMVSSQYLNAYDTRNVAGKSKGLMDGQTNVSEGKTSQTTTWFVMNEKMTDKKEIEIEYANDYSQGFKGSKKFIVPLEH
complement(897944..898288)         PHAGE_Strept_phiARI0031_NC_031910: hypothetical protein; GU337_04545; phage(gi100050)     1.20e-29            LactococcusraffinolactisMYKNILGSVIKDIRKSKKITQVELSKKTGFSQNTISNHENGNRSLNESDINIYATAFDMLPEQLFEAYNVSHFNDPTIILEINSIIKELNPPNQLKALSYVKRQLAKQNKEKKS
898443..898676                     PHAGE_Strept_phiARI0031_NC_031910: dsDNA binding protein; GU337_04550; phage(gi100047)     9.07e-17            LactococcusraffinolactisMAIQGIKKELRVKFLVPKAKLKAERRAKEWTTSYVAELIGLERRQYEQKEKGLYPFHDYEMLILASAFGKKVSELFF
complement(898872..899066)         hypothetical protein; GU337_04555                                                    N/A                 LactococcusraffinolactisMSNIKIKGLDKLMKQLSDPKQIAKQAIAGSNGIEIKCPNCQKLIKVPLNGKTCSCGQKITLNLK
complement(899123..899287)         PHAGE_Clostr_phiCT9441A_NC_029022: hypothetical protein; GU337_04560; phage(gi971821683)     2.76e-19            LactococcusraffinolactisMVTPIKPGTDNQPSGDYTEVGPRGGTVPNARQVHIDQGDRLPPTQKSGNQWVKK
899438..899623                     PHAGE_Brocho_NF5_NC_015252: gp51; GU337_04565; phage(gi327197636)                    1.27e-08            LactococcusraffinolactisMQKVIIQKMKEKNLSQNQLAKLVGVKQQYISKFLLGKVKSPGFNFMIRIADALDIDLNDLR
899905..900231                     PHAGE_Lactoc_lato_NC_004746: hypothetical protein; GU337_04570; phage(gi30089865)     4.31e-20            LactococcusraffinolactisMVQNINVNLAIPIPDDMIVIKKTEFEELKQNEIKGHWVGMHDLVKHTGRSDVWLKAHILNNINLRDRLDIENGGWVFYPRKGDKWLFKLSGLKDFVENEFSNYVGGRK
900275..900658                     hypothetical protein; GU337_04575                                                    N/A                 LactococcusraffinolactisMSCQNRDDLEFVIWRQAQEIERLKGENAWMRKNVAIVIEKDNDLVSENKMLKQQIEEFEKVKNADVPLEDYADVFTKSELWRTPQTENNRLLDIIFKRDQDKTVRVPISDAVVYIVKELNNERIGTL
900636..900818                     hypothetical protein; GU337_04580                                                    N/A                 LactococcusraffinolactisMNASELYEQLQEKDKTIVNLRKYMMAYTLAVDELHGAEGSQKIKILAKELLASRVEKWSK
900820..901212                     PHAGE_Strept_315.4_NC_004587: hypothetical protein; GU337_04585; phage(gi28876357)     4.26e-15            LactococcusraffinolactisMLPKFRAWDTTLKIMHDVQIIDWISETVGVDAIGGVLETPLKELKLMQSTGLKGQNGIEVFDGDIVRLFNVGFIYKGVVAQNSATYWWIKGVGTSTDFTFEDVADYRNYTCELEVIGNIYENQDLLEVAK
901383..902249                     PHAGE_Lactoc_Tuc2009_NC_002703: putative methylase; GU337_04590; phage(gi13487817)     1.20e-116           LactococcusraffinolactisMRVESVAAVGDRRKRIKYETYNDHFENAKRYNIPKAQLIISDIPYNLGKNAYASSNEWYIDGDNKNGESDKANKEFFDTDKDFKIGNFFDFATRLLKPESKEKTGKTGQTAPCMVVFCAFNQQAMVIEEGRKHGFNNYINLVFRKKSSPQVLKANMKIVGNCEYAIVLYRNRLPKFNNHGKMVMNCMDWVKDGKDVPRIHPTQKPIATLKTLIELFTDVGDVVIDPCCGSGSTIRAAYELGRSAYGFEIKKDFYAKQAQLFEGMKMQVSIEDSDKIKADDTEMQLELF
902262..902663                     hypothetical protein; GU337_04595                                                    N/A                 LactococcusraffinolactisMKIYLATPMNGRSIEEIKERIADCASLLANSGIDFFNPFSEAIATDNAVDGVVADKRPVEILCNAAKYIEDCSSVLFIGSMDELRQSLGCQVELVIAVNYGKGFYLYDDGEIIEIESLELTWEFSRRTKGQLR
902857..903126                     hypothetical protein; GU337_04600                                                    N/A                 LactococcusraffinolactisMKLIIKNKRSKNGLSMGNPIEGYNLTFSHTTVFKDDIVIDVTFWGVFKGRDKNMERIDSAIAELNEIKRFMIENPDFTAGTIEIVDEIE
903138..903425                     hypothetical protein; GU337_04605                                                    N/A                 LactococcusraffinolactisMNKTEEIFTKKQFKAEVKSANVTDSGLALKLIVPFTEMMPIIPTLAESIGQVIDFEYTLPQGNLLNVVGWNNPNQTELNLDPQLNKTKDKDDDEK
903621..903890                     hypothetical protein; GU337_04610                                                    N/A                 LactococcusraffinolactisMNKSDKIILASNGLFIGLLITLIFSFLGSMAYQKKQITHLEAKQVKLEKRIDNLAQALTTKDKEIETGIRQVQDGIMLKIDWLEKKVVE
903887..904843                     PHAGE_Entero_phiFL3A_NC_013648: DNA cytosine methyltransferase; GU337_04615; phage(gi281416239)     5.64e-113           LactococcusraffinolactisMTLQILELFGGIGSPRIALRNLGIDVKSIDYVEIDKKAVDSYNAMFASDMLHKTQSVVDWNLKPDILIHGSPCQDISIAGRKLGADEGSGTRSSLMWETLRIIEEFGEWKPKIVIWENVKGVLHKQMKQNFEKYLYEMCRLGYTNSVEILNATEFGLPQYRDRVFTISRLDGQRFNFDELERFEMRPISEFLVSGPSEWHLVNQPSMTKHILGHKDFDKNRKWKRNLHIIKDWCYTISTRQDRNPNSGIVEIAPNEYRYLTARECWLLQGYDEADYEAAAMVSSKTQLYRQAGNSIPVPIFESIFKALLESEIKHDNS
904830..905288                     PHAGE_Lister_LP_030_3_NC_024384: DUF3850 domain-containing protein; GU337_04620; phage(gi658607650)     6.23e-11            LactococcusraffinolactisMTTHDLKLNDKYFNAVKNGIKTFEIRNNDRGYQVGDILVLHLWADVGGISGYAKKTGATLADGKTELIDKVPEYLADKIVVKVTSIMTAEDYNSYEDSKKMSRFGQTHEVRRCGYWFKFSKIDKVLNEYFGKDSLPHGYVVMEIEVVEWNEC
905273..906076                     PHAGE_Lister_LP_030_2_NC_021539: putative adenine-specific DNA methyltransferase; GU337_04625; phage(gi514051972)     6.35e-98            LactococcusraffinolactisMERVLNYPGSKWSSAERIINLFPKHKSYLEPFAGSLAVFLNKPPDVLETINDIDGRLINMWRVMRDQSDELARLVALTPYSRTEYELSKIKSDDNLEDARRILIKCWFSVGGKSDGGFRRNVRWTGPYNTQTWQSMPSRIIQAAERLRDAQIEQLDAIELIEKMNDDDTLIYADPPYMNETVSSKTHYKFGMADDQHLKLLSTLKNHRGPVILSGYNSDLYAEELKGWSKIEFDSATGNVGQKKKIAIECLWCNFDPVEQMNIFDTD
906574..907416                     PHAGE_Clostr_PhiS63_NC_017978: gp31; GU337_04630; phage(gi388570658)                 2.70e-24            LactococcusraffinolactisMSYMRNTAISANNKYRECSIMGKSVSVDLVRGGRPRRKKENATRPVQKNLNVRKAQQWFRLSAIANFSEGDYTAEFTFAPEFKPESVEECEKEIANLIKRINRARKNKNLPKMKYMGVIEGKTTDKLHFHVIMDNLLNRDEIDDLWSKGRGKNKKSIGWTKIDKIKSQHGVDGVIVKANYMTKEFKLENQKGKRKWFASRNLKKPVIERSQNWKYTESKITKLLENEELAEQLERDNPDWELIEFPRKNPDTQKDELVKLDIRENEYLGLMIYYRMRRRE
907418..907861                     hypothetical protein; GU337_04635                                                    N/A                 LactococcusraffinolactisMGQPEFSLCEARLLECLQDKKSLTGWPRSIATIARVGQRGLDIARKKLTGYGFVSEEILTNDDGDGTHVIKLSITERGMQVVAISDGKKSERVNGDIKDLIANMGYRQDEIAKELGFSKATFTRKINSELRDDERKDLIKRIRQLCQ
907885..908229                     hypothetical protein; GU337_04640                                                    N/A                 LactococcusraffinolactisMMIFGGIPSDQEWRMIYKDITQLLKQYDKLSDIERSHIDCALECVEKNKEIAHYIIIERFLKGVKKKSYLQLAFELYYDDSNVRKIRNAGYRFFAKEYKGGELIDRCLNKRDET
908195..908500                     PHAGE_Strept_315.1_NC_004584: hypothetical protein; GU337_04645; phage(gi28876173)     7.46e-32            LactococcusraffinolactisMIDVSTRETRHRFYISTDWLKLRDKVLARDNYECIWCKAEGKVTTRKRAVLEVDHIKELEHYPQHALDINNLRTLCKDCHNKRHNRYQKSVNKFDDEEFTW
908606..908911                     PHAGE_Strept_315.1_NC_004584: hypothetical protein; GU337_04650; phage(gi28876174)     2.69e-27            LactococcusraffinolactisMAKTKLELELSKLIDKNSASDIEIMRRYLSLVDTYKKLDKSIEKNGVMISVKNGKQTFLKANPAVSEKVKVNAALIKLGEFFEKKRSEKTAEKGINLNELY
908916..910646                     PHAGE_Strept_315.1_NC_004584: large terminase subunit; GU337_04655; phage(gi28876175)     0.0                 LactococcusraffinolactisMPKEVKKYAAEYEKGKIKLNKERKQLIEYIEREIGPRLKSKELFFDIDQIEKCIGYIEKWFFKLENFQKFIIAFVFLYFTENRANVYREFLIMMGRGGGKNGLISGICSYLLTPMHGIAKYDISIVANSEEQAKVSFDEIYDVIEGNPALKKTFDNKKAKIRNRQTKSVIRYVTSNGSTKDGARDGAVIFDEIHRYESNRDVRVHVSGLGKRPNPRQFYIGTDGYVRDGFIDNIKDKAQKVLTGKTRFNSLFPFICKLDDERQVDELATWELANPMFHKPLSSYAKDLWNEVVEQYEELQDDPSNREEFMTKRMNLPIADTERSVASHDELVATKRDFPDLTGRQCIGAFDYAAVRDFASVGLLFKSGEDYVWMSHSFVRKEFVDATYGYSKPKDSVNGKRIFAPIKKWEEDGFLTVLDEPTISAKYIADWFVRMRDDEGYDLQTIVADRFRAEHVQQAFEAHDFEVQYKNKFDAPPGYRLEILRNALAIDSLVAPKVESAFASQNVIFGNNDMMRWYTHNVLRKIKGDGNVIYVKKEDVRRKTDGFKAFEYAMYHSGDLQDVSVGDFYDNVDDWF
910765..911889                     PHAGE_Strept_315.1_NC_004584: portal protein; GU337_04660; phage(gi28876176)         1.05e-70            LactococcusraffinolactisMGLLDAILGRKERSSIEFVMASATAQATMKNIALDTCVNYIARTFSKAIFVKKDKNQKSVFDEDHYLLNSRPNPNQTAAEFWAQAVSKLIRDSELLIVAYQRGLFIADSFVKNESLMGDTFSSVAIRSENLPRVFTKSEVVYLKNENRALDNFFDSLWSDYASIMGASVGAQIRSGQVRALWSVSTSKLDEEERKSQKRLRENIVEEIKKSPVVLIPKKKDKDYEEVSNKQNTGKVSNIDDISKTKKFYIDDVSNILGIPNGLIYGDVADNQKNYAIFIEAVIEPIAGKLIDGLNHIVYSKSEIIAGHTVKMLGVRRRDMFELSSNIDKLISSGTVTRNEVREELGRSAVEGGDRFLITKNYEFEDGKKKGGEE
911889..912653                     PHAGE_Strept_315.1_NC_004584: head maturation protease; GU337_04665; phage(gi28876177)     4.50e-70            LactococcusraffinolactisMLKFLFNGAVIDDIDAWFYDWFGDPYVSPKKVTDFLEQAGGQDIQLCINSGGGSVFAGSEIYTALKEYDGKIEVVVSGIAASIASVVAMAGDVVRISPLGQMMIHNAAMVDYGDYREFDHASQILFATSESLAKVYADKSGKTVNEVLDLMGAETWMTADKAVEMGFADEVLFTTSEPMQLVASAGHIVSRDKIEAFKAMMADKQNQTAAEADKIKIDGEKLAKLVNQAVEKALEDKTTEKPKPVNDLARFVFL
912672..913802                     PHAGE_Strept_315.1_NC_004584: major coat protein; GU337_04670; phage(gi28876178)     1.19e-119           LactococcusraffinolactisMTIFNTLPNYQAAVAKFTESMANDADKATQNALYAEAMQTLGSDLTETLTNSNKESLEAMFASQRANKGMTANEIKFFNDIAKNVGTKNPILLPEETVNEVFEDLVSEHPLLGIINFKNAGLRLKALVAETSGAAGWDNVFTDIKNQLDAVFTEEDFSQSKLTAFVVIPKDALQFGASWIKQFVIAQIGEAFAVALESAIVNGDGNKKPIGLTRDLNSGTTSNGVTTFNPKAATLNLTTLTPQTAPTLLQPAMSTLSISEKGKSVAIGGSVIMLVNPSDYYALEAKFTALNANGVYTFTLPFGIQVMQSVAVTAGTAVIFVGKRYDAYVGGGTEIKEFDQTLALDDLNLYTAKAYYFGKPKDNNVAVIATLVVQGA
913804..914214                     PHAGE_Strept_315.1_NC_004584: hypothetical protein; GU337_04675; phage(gi28876179)     6.00e-05            LactococcusraffinolactisMKIRVLIDFVDFSVNRTRHVGEVFEVTEERFAVIDAALPDFVEKFGKDVSEKAADDAENQGNAEADDAEGAENQEGSQEDAQDDVAPVDADEDKSEVVDKIPDSGNKIDEIRAYLKAQGIEYDAGMKKADLLALIK
914222..914539                     PHAGE_Strept_315.1_NC_004584: hypothetical protein; GU337_04680; phage(gi28876180)     1.41e-13            LactococcusraffinolactisMTLGEIETWVGGKLEAFKLRMRIGTTAEDDNLKQMLTSSAMTLIRLTGANALDDPTLVSLIFDRARYEYNDALDEFMGNYQVEINMLYVQYSLGDDADDIEPETG
914514..914888                     PHAGE_Strept_315.1_NC_004584: hypothetical protein; GU337_04685; phage(gi28876181)     3.03e-23            LactococcusraffinolactisMISNQKQGKNKTHNGKLRTPVTFYACSVANGLDARENAMSVIYEAFAECYAPSSKDIEILKNSSVSPKRSLTIKIREPMSDYRPDNKHRVKVHDDRFSAVIWDIVDIRPDLTQNEFITILLKGD
914890..915285                     PHAGE_Strept_315.1_NC_004584: hypothetical protein; GU337_04690; phage(gi28876182)     1.30e-21            LactococcusraffinolactisMVSGAELQGVDEFLKNLESKLGETRVNRIVNKALKEIGAEAAQDLQAAGQKFVDPDMIASSRVSRVDGVPAVKVGWVGGRWRVVHLNEFGFHHKSGKFVRQGAYGVMRAYVVKQEASYPSKLRDKLGELTK
915282..915659                     PHAGE_Strept_315.1_NC_004584: hypothetical protein; GU337_04695; phage(gi28876183)     5.51e-26            LactococcusraffinolactisMNDMLTEVWLALSDRSEFAGVTIKSFMRPESLEDDKPSIVIVPVGPPEQAMPGSDDFLAQRYTYQINVESPDRVQAKEFAKMVGKVMLGLRFVQLTGGLDDYFDATKRYIDARTYRGTGALYADD
915675..916265                     PHAGE_Strept_315.1_NC_004584: putative major tail protein; GU337_04700; phage(gi28876184)     1.70e-40            LactococcusraffinolactisMALIGFKRLTIRVLTGEAPVTSGEGQNVFVIEGKTGEGATQEAKIDGLSTDPVKTYGSDAAYHVSRKGVGDVKAEIKTVDIVETAKVTILGYLRKDDITYIGSDTEAPYCSLLFESSNIDGTPALLGIFKGSFSLNSVEMKTLGDKTEELPGESLTYTAIASDDADTKGEYVASYSGSDETSISKLKAQLHIIAGA
916315..916608                     PHAGE_Strept_315.1_NC_004584: hypothetical protein; GU337_04705; phage(gi28876185)     7.20e-16            LactococcusraffinolactisMALEIRFKKGKDEVVKTCQFIPARKYLEYLEIEESIDQGDEKPSEVLNKRLKFIVSLFDGLTVDDLYDGLSTKELPIVTQEVVMAIFGGGDDDPKDK
916656..916799                     hypothetical protein; GU337_04710                                                    N/A                 LactococcusraffinolactisMTSQQLSINELMDSDWHSLLKVLGTDDADETDAREDVVDLADFINTL
916913..917083                     addiction module toxin, HicA family; GU337_04715                                     N/A                 LactococcusraffinolactisMKKRDVEKRFKKGGWWLKRHGGNHDVWTNGEREEQIPRHPEINERLAKAILKRNGL
917114..917506                     PHAGE_Paenib_Harrison_NC_028746: antitoxin HicB; GU337_04720; phage(gi971482390)     3.04e-17            LactococcusraffinolactisMSHSIAFPTVISFDDQEKSDYKYLVYIPDLDGYTQGVSLADAIVMARDYIGTFSLDNPLPEPGKVSFKAEDSDVVTLVDIDPDKYRRELDKTPVKKTLTIPSYLNDAAINEGINFSQTLADAIKDKLHLA
917580..921887                     PHAGE_Strept_315.1_NC_004584: tail tapemeasure protein; GU337_04725; phage(gi28876187)     0.0                 LactococcusraffinolactisMANGTPLGNIVVKLGLDSSSFGDGLAAANRATRYFTNEVKAMDNMMKLSGKSSDGLGAKQASLKNAIEAQSKALKVLKEDLKNAEPGTAKYETLANKIQTANVKLASYQAQLQSAAREIARYRVETEGATGVLNRFGDGALTAGKKLDGVGRGMSSIGGTLNKSVTVPIMAIGAAAIKASIDYESAFAGVKKTVDEAVDANGKVIISYDDLSNGIRAMAKELPASASEIAAVAEVAGQLGIKTEDVLKFSRTMIDLGESTNLSATDAATAIAKIANITGMTSDEYQRFGSAVTALGNNFATTESDVVSMTNRLASAGKLAGLTNQEILGLATAMSSVGIEAEAGGTAMTQTLTVIEKAAVMGVSAIGDLEQRANAAGLSFNDVATAVYKGGSALKKTAAQMGMSNTELRKMYEDAGKASESLSQFADIAGMSSEQFAMSWKNKPIEAIQAFIKGLGQLEGKGESATLVLDEMGLEGIRQSNMLKSLALASDTLTGAVDTSTKAWNENSALTSEANKRYETTESKLKMLKNEVTDVAIEFGGPLVDAMRDGVQAAKPVIEFLGDMSKKFSSLDREQQQNIIKWGLIAASVGPTLSIFGKIISITGKATTGVGTFSKGVVELIAKASEKRAIAGLATEVTAVGTSAASSATSIGAAATKTGELGKLLPMLVSPVGAVVGATALLTGGLVAYSMHQDAARRETEKWGVKLSNTADNELTKFKVQVDNTSDAIIGFEAGAVTADKVGEAFKKMYSEIEKAGQDADKRLEEAAQRAGLTDEQIAKGKETNAQFVKNAQMMSDQVVAIYQKHNGDTSKLTAEEKEIVLNNQREMITAQLDLMNLSKSEKKNILTAMNGDVNSLNRTQLESTTTHIAKLMSEENKSYKQQKDDLDELFAKKSLSQEEYNAKSQAASAQHNANMETYGKKYISAMEALDRAMQASGIDKTATGIWQKTRETLDKYGDGMYDKIIAKSHEAGQAIGASSSMIAKYTDDMSAEGKAAKDQWNALVFDPKTGELKQNAKEEVAKALQAEDGWQRMGFVVKNAELTTNARETIAQALIANGKWENLYPGEKELLFRNEEGMQAIYESKEMLATWTAMPDPIKKMLANNKDFMTKSEAAKTEIDAWNALSPREQELRAKNATKTSVFDAQNTINSLTGLQVDLTASNKTAPDKDAAQFTVNSLYGKTVDLNASNQTFAGKNAAQGTVNSLLGKTVDLFSNNLAGAGKDSAQGTVNLFGGKTVDLTASDLTNIGVSNAESTIARLPSEKNIVLNFLTGGNKLERGTNYHDGGVAMVNDQKGSLYKEMVTLPNGQSFVPEGRNVLLDLPRGSKVLTASKTAPLIPRYAKGVGPQRIPLNSKIFKDIAKVKMVMNKTTFFQQNTDGSALKALADALKNLKQQEVVQKIVIENVTWTGKEDISKLLEQLANQEIINARGAFG
921884..922609                     PHAGE_Clostr_phiCT19406C_NC_029006: tail protein; GU337_04730; phage(gi971821558)     8.19e-14            LactococcusraffinolactisMSIVYRGKNAKTDYNLEILSDLSFENAARDVEIVEIPGRDSDIVIDNGRYKPVSADISFVMWRKSSFTTFENQMNAVKNWLSAAFGYSNMTWYPEPNYIYRARVDGSIKIKPVDKTKAIVDVKFILSPSKYLVDGAASQALSNGGTLNNLGLVNSQPSITLTGTGNVTLTVNDKNYVFKNITGGLIIDSENKVATNLSKSQAQWDKVYTWPLPMLKTGSNVISWDNSAFTVTIVPNWCELV
922677..926186                     PHAGE_Strept_315.4_NC_004587: hypothetical protein; GU337_04735; phage(gi28876329)     2.68e-64            LactococcusraffinolactisMSYPILYQAGETNFQHQGLGVLADSISADVSEDLNGKFELDLVYAYNKSMSKLLVNGNIIKADAGNVLKNQRFTIGQVNRTIDGNIAVHAEHVSYISGDLTLKPKTIVFEQDGQGALNQFVNAIKETDHGLTVYSDVTTVSSSTWAVPDFKNPRDVLGGVEGSILDNWGGEYKYDNKHISLLKQRGSYANTVIAYSRNMTSFEQEDSILETVTSIYPVAVISSQSGDATDAVTHTLPELAVDSQYLNRYDHRKTLLVDFSSEFDDKNPYSDSKLRALANKYIKDNKVGVPKVSMTVSTLDLTKMVADYSASKIERLDLADTVPVYFDKLDIMTDAKVVGSKWNVLKDCYDEYTMGSRKATLGSIIKGSVAEVKSVAEAAKKHAIEALQSANGKNTNYYGNSGDGAPQNPQVGDLWFVKDGENTIIKQWNGTSWVELISTVWQKQFEEELKKELAKAKEELDAALAEKDKAIKDLDTKIAAEMTVIDQSIVQVKSDTVDAKKVANDAVAKANSNIIDLQAAKIDITKALNDSTSALNAVKVVDGRVDSVTTTIANVKIDVDKKADKTTVASQISQSATQVKQDVQSWTNGQLTNYSTIQSTDSSIASAVADKVTQTQWTQLSNQFTSTVSQLSNSTNLFSIKRMQISNDYHSAYPSFLLVRVPTDIGATYIASTDNPNQNLWFIPDINSDPAALTYRVYKGKTVTFTATNTISYAVIRDTLTKEQLSNETYHLKIERGTRDTLWSPSEIDSVSRTQFTQSIDNINLRVVEKGDIVNQINISPESILIAGNKVQITGQTYIENGVISSAKISDLSASKLTAGTIDASLINVTKINASNITTGILSADRIAANSITATHISISSLSALSANLGIVTAGTINAATVNIININASNITTGTLNADRIGANSITADKIKATSLDLFSNDSYTNVRSDGMRIQSKAQIIFGPWIDINGSKRNTQGIYIGGFGGGTKHVALTRSNGTTFLLRAEDGMDYGANQNVAIGALNLYDNVHFWESARVHGNLINEGYIAMGGGIQEASIQYDKSAGTMNFRVPGGRSGSYFWFNQKVVSTGSFDSVSRLSMKNVRGDYQGDALADICATEIVEYSYKNRPKEKQLSPIIDDINEVKRYHLPDIINDGKAVNLYAMSSLSWLAIKQLAQKLENIEEKLDAIA
926173..926586                     PHAGE_Strept_315.1_NC_004584: hypothetical protein; GU337_04740; phage(gi28876192)     2.54e-08            LactococcusraffinolactisMLSLKNQELAPVINFLTALELSPKASRCRSKLVKKLMEKYEEFGEDEKSLFEKYGKRDETGELLKSEEGVYKLVEDTAAECLTEQQSLVDEEVTINLDEIKDKVKFLVSKLDKLDVKFSGNDAVIYDVLMDKLEEEI
complement(926664..926933)         hypothetical protein; GU337_04745                                                    N/A                 LactococcusraffinolactisMSYNPDELIHTYIFGLDTSAKVDTSFVKDMSEIKVQILKQTPELIVNYSEYPKGFKILMNQYADKVEYITNYPLKEIRPGEFAVEFPLV
926994..927263                     hypothetical protein; GU337_04750                                                    N/A                 LactococcusraffinolactisMALTRLTSEGTITAATTVNGADVVYYSASISTDGKFNFSVTGQVADAMFGTDKKLASEIMSDITAFTDEVYRQANANRAGYLATTVEGE
927275..927619                     PHAGE_Lactob_PLE3_NC_031125: DNA helicase; GU337_04755; phage(gi100021)              1.10e-18            LactococcusraffinolactisMNKLLEVNSVMLAIFGISIFGAISSLSKALLKQQEKKQKEKEILNDSILMLKKANLAILHNKIYTQCGEFLEAGYICVDDLDDLNYLFNAYKSLGGNGTGETLYNKVAALPNRK
927631..927843                     hypothetical protein; GU337_04760                                                    N/A                 LactococcusraffinolactisMNNKTYDALKNLVLGGLPILITFLSSLDFEKATTIVSALTAALGLATIVAKNIYDKNDDGKVDWKDLSDD
927933..928613                     PHAGE_Strept_YMC_2011_NC_018285: phage-associated cell wall hydrolase; GU337_04765; phage(gi399498684)     1.35e-26            LactococcusraffinolactisMTNNQIIEIAKKYLGKSVDVDGAYGAQCVDFSNRVAMDADGTRFTGNAIDMPYTVNHGKWVWIRNTDDFVPQGGDIFVESWASVHPYGHTGVVLNATMTTMNCLEQNYNNKMYVVETNRAYSKDGLVGVWRFQGGTEKPSNQTESQTFAGTYRVVADVLNVRSAPTTSAEKVATYTKGQTVKLDSWYTVANGYVWGRYTSSSGQTRFVAIGRSTGKTESDDYLVKI
928716..929036                     PHAGE_Lactoc_ul36_NC_004066: putative lysin; GU337_04770; phage(gi21716129)          1.30e-34            LactococcusraffinolactisMPVANTGQTHVVQYGENLSGIASTYGTTWQELARINTLSNPDMIYSGQTLNVVGGQSVATTGVCVVEYGDTLSSIAAQFGTTVERLVSANGISNPNFIYTGQVLKF
929559..930467                     serine protease; GU337_04775                                                         N/A                 LactococcusraffinolactisMPSRNQIISQIGQIMSERPDTEVNIYIDNLRKDYIKQLSDYSGRNTIAYYSAFMTKQSLNMDINDSDINGFMCVVHDLDRSKGLDLILHTPGGSPTASESIVKYLRKMFKNDIRVIVPHMAMSAGTMIACSSKEIVMGTHSSLGPIDPQFNGIPAYNIKSEFEEAEIDLEKNPNKAAYWAIKLQQYPAAFMKSAIDAIDLSDKLLTDWLGTSMFDKDLDKEKIDYIVKKLNNHTDSLVHDRHFDIDTCKGIGLNIVGLEEDQKLQEKVLSIHHAMMISFESFLAVKMIESCKNTYIINSNNN
930491..930697                     hypothetical protein; GU337_04780                                                    N/A                 LactococcusraffinolactisMNNQVSFNDRVDAIYKKTGLSKNKNTEINNRLNVGSISALYYSNSNTFGSEISKINKNSQSLNFNYKQ
930789..930861                     tRNA                                                                                 N/A                 GGACCTTTAGCTCAGTTGGTGGATCTCTTGGCTCATAACCGAGCGGTCGTTTGTTCGAGCTCAACAAAGTAAA
931140..931151                     attR                                                                                 N/A                 AAATAAAAAAGC
931333..931345                     attR                                                                                 N/A                 AATGTCCCCCGCC
complement(931335..931406)         tRNA                                                                                 N/A                 GTCCCTCTAGTATAACGGATATTACGGGCCCCTCCTAAGGGTTTGATGCTGGTTCGATTCCGGCGGGGGACA
complement(931439..932533)         PHAGE_Pedioc_clP1_NC_016161: helicase; GU337_04790; phage(gi356870769)               2.38e-07            LactococcusraffinolactisMTLTKNKLPEVWADVLASVSDFTEIQQQSFDVISSGQNVLATSPTGTGKTLAYLLPSLLKVKKKQGQQLLILAPNSELAGQIFEVVKSLAEPLSLSANLIISGASIKRQIERIKKGPEIIVATPGRALELVKDKKIKMTAINTIILDEVDNLLEDSQWKFVKPIITRTPKDYQFIASSATAHEVYETMASFAPNLAEINVEKTDATVDHFMVKVENRKKIDLLRQIAHIPGMRGLVFFNRLEDLGNAEEKLTFQNIAAVSIASDVNGRFRKTIIEKFKNGEITLLLATDIAARGLDIDDLDYVINFDIPVNLESYTHRTGRTGRMGKSGVVVNIVGNSFDEKNVKKYQKQPEKMLKAGEFINLK

#### region 3 ####
1106094..1106105                   attL                                                                                 N/A                 TATTTTAAAAAA
complement(1106140..1107345)       PHAGE_Lactoc_bIL310_NC_002669: integrase; GU337_05605; phage(gi13095863)             7.18e-103           LactococcusraffinolactisMKKQIVKKDGPTINKIIKKDGSTVYRANIYLGIDVNTGKSVRTSITAKTQKAIKLKASKAINDFQNNGCTRLAKVSCKTFDELIQLWWNNHKLSLKNNTVTSNQNFIKSYISPALGAYSISKISTSIIQNQMNIWANNANSSKLYTTGSTKSYSVLLNIITRIFQYGISIGVVTFNPARDVILPRIKRQENKKIKYFGNSELKVWYDFLNSVPNTEQDALLVTLCKLLLSTGMRVNEALALNWSDIDYHNGVVSVTKTLDSKGKLESTPKTRSSARIIDIDQSTILLLKQYQNRQRNLFLKSGLNINGIIFTNGIKPYLLRSTLLARLKKYFTLAKVPDIGFHGFRHTHASLLLNAGVEYKELQHRLGHAQLSMTMDTYSHLSAKNARAVVDIFDKAIQNL
complement(1107404..1107862)       PHAGE_Strept_PH10_NC_012756: hypothetical protein; GU337_05610; phage(gi238821319)     4.16e-14            LactococcusraffinolactisMEKEYIFKSKGKSFVKIKDDKISIIKKGIIYAVNQGFKGEKTLFIKDISAIQVKKSGLLIGYLQFSLKGGYESKGGVMDATKDENTILIGNKKDYLQALEIKEYVENFISNSSSTPSIKSLPEQIKEYKSLLDEGIITEDEYNVKKADLLSK
complement(1107931..1108314)       PHAGE_Lactoc_bIL286_NC_002667: repressor; GU337_05615; phage(gi13095747)             1.02e-14            LactococcusraffinolactisMNTNNEIIEIITSRRQELGLSLSEVARRLNIPKSTLSRYESLQRQFPLELIDSISNVLNIDPRVILGLNTSKKINNNCTYNDITLEILNILNSVDEENQKNILNFAKFEYSQAEQAKQSKEKSASVS
1108469..1108711                   PHAGE_Strept_315.5_NC_004588: putative Cro-like repressor; GU337_05620; phage(gi28876431)     1.78e-14            LactococcusraffinolactisMFLDLNRLKAERIARKLQQKDVANELGWSVGKYTKIENGYSKLGSDDLAKIADVLGIEDMNIFFNFSVVKLERKLIKEVI
1108897..1109148                   hypothetical protein; GU337_05625                                                    N/A                 LactococcusraffinolactisMSNQEKGQVVIGLEIKNLTEFKKEVEAELKKLEILEKPKVSISQAITKFSIEVLQIEETKNNPEMVAAIAELLKIGNVSNLRI
complement(1109137..1109358)       hypothetical protein; GU337_05630                                                    N/A                 LactococcusraffinolactisMQVTIYMLHDGKFLEIIIDNFKELTCFYGNANRTFKDDLSNLKINDDTTYNFKGDTQVSLTGSKIGYIELSNS
1109507..1109692                   PHAGE_Brocho_NF5_NC_015252: gp51; GU337_05635; phage(gi327197636)                    6.17e-08            LactococcusraffinolactisMQKIIIEKMKDKKLSHSQLARMIGVSQQYISKFLQGKVKSPGFNFMVKIADALDIDLNDFR
1109734..1109940                   hypothetical protein; GU337_05640                                                    N/A                 LactococcusraffinolactisMNIIEGKEPRKEIAGEPTTLSIQAYIFDIEKAPELMKDLEVLAQKYTVLVEVHFPLVEVVSQEKGKSK
1110264..1110530                   hypothetical protein; GU337_05645                                                    N/A                 LactococcusraffinolactisMDNLGIFSEHLESLIKEGVDAAIEKIIAVKLLDEDTITQQEVLKKYKITDPVLKTWRKAGLKRYEPPIRGTRSLYYRKSEIEKFLGMK
1110603..1110977                   hypothetical protein; GU337_05650                                                    N/A                 LactococcusraffinolactisMSYQPRYKLEKLIADQNTEIERLLEENEWLRKNVAIVIEKDNDLVSENRSLKQQIEVFEKAKNADVPLANHADVFTRSELWSKPQTENNRLLDIIFKRDQEKTTRLSIADTASYIDRELTNAKI
1110964..1111149                   hypothetical protein; GU337_05655                                                    N/A                 LactococcusraffinolactisMQKSESDYQKEIADKDETISKLRKYMMAYTLAIDELHGVEGAKKIKDLAKELLTTRVEDWT
1111149..1112102                   PHAGE_Strept_7201_NC_002185: ORF13; GU337_05660; phage(gi9634640)                    1.16e-102           LactococcusraffinolactisMRKEKIEDLCEIDTRKRIKYETYNDHFENAKRYNVPRAQLIIADIPYNIGENAYASNPAWYADGDNKNGESDKAKKQFFDTDNDFKINNFFDFASRLLKPESKAKTGKTGQTAPCMIVFCSFEQQWMVIENGRKHGFKNYINLVFRKKQSSQAMKTNMRVVGNCEYAIILYRDKLPKFNNPKENGKGKMVMNGMDVTIGNPDDYYLDFWKYGGWCVEWQSDDKSIPKIHPTQKPVSLIKNLIELFTDVGDVVIDPCCGSGSTIRAAYELGRSAYGFEIKKDFYIKQAQLFEGMKIQVSLEDSEKIKADDADMQIELF
1112115..1112513                   hypothetical protein; GU337_05665                                                    N/A                 LactococcusraffinolactisMKVYLATPMNGKPIEEIKQKISDCASTLAKNDIDFFNPFLEVTANDNSIDGIVKDKKPIEMLCNSAKHIEECDGVLFIGSKDELKLSSGCQVEILIAVSYGKNCFIYEDGEVSRLVELELIWSFGKVKERFS
1112510..1112650                   hypothetical protein; GU337_05670                                                    N/A                 LactococcusraffinolactisMRYGLYKGNKLISVFMNEQYAKHKAEIYKNDRVTPGLYYVKPLEEK
1112647..1112847                   hypothetical protein; GU337_05675                                                    N/A                 LactococcusraffinolactisMKKYIVGYNATKLKAKWYVSNFNNPMQKLTNVKSEAFKFDTSEVASAMVKHLKMVRQYDWAVEEIK
1112847..1113128                   hypothetical protein; GU337_05680                                                    N/A                 LactococcusraffinolactisMSKQSIFTSKKFQAEVKSANVTDGGLALKLIVPRTEMINIIPSLSECIGAVVDFEFIIPQGDMLNVTEWKSPNQTELELDPQINKTKDQQDED
1113118..1113459                   hypothetical protein; GU337_05685                                                    N/A                 LactococcusraffinolactisMKIEVKELVCDWGIFINGELSKDLIFISKENAKEVKRIMELDNAHISVDRSTTAINITKSEEYMLKQFRKASFIDVGIVDYSGTVPQVLISNEMRLVDAYLYPELVEVLDEKG
1113446..1113673                   hypothetical protein; GU337_05690                                                    N/A                 LactococcusraffinolactisMKKDSRIYSLLLVSVILLLLAVSLIWVQQTEINKMQHEQIIIKQRIDNATKALQTKDAELESYLIQYFINQGVEK
1113670..1113927                   PHAGE_Entero_EFDG1_NC_029009: putative repressor; GU337_05695; phage(gi971765186)     4.46e-11            LactococcusraffinolactisMKEKVFYYAVIPVIALAAVIGFVVLASFSAENSAIGKEESIASAKSGISKEEQRRVDLFSNIVDAVQSYNKHESNTLKKRDGCAC
1113908..1114222                   PHAGE_Entero_EFDG1_NC_029009: putative repressor; GU337_05700; phage(gi971765186)     1.61e-30            LactococcusraffinolactisMTDARAKAQSGDVEGAKSALNIVVEAYPEIKSQANYSQAMKEFSITENRLAEYRDNYNQSVKTYKRYVRKFPTRLFLSWRGYEVSEHEYLDFKVDNSKATNLFK
1114231..1115022                   PHAGE_Entero_EFDG1_NC_029009: hypothetical protein; GU337_05705; phage(gi971765185)     2.29e-24            LactococcusraffinolactisMDGKLDIKDFKIVAIIFTLFSLVAVGFIVNSKIQESVMDEVELYRKAIKLENKKDMFDYTVETEQGNFITTTDIKSVEKVKFPEMDKDIAPSIISIERKEFKETYDMKTRTVTYTDSKGKTHSKTETYWEWVWHHIDTNVLGSPEIEIHGNKYKTSEFSFWYQGLDASKLISQANRSEYYTGPHHKFRYAAILGGKFTIFAKAAGGTIKPVTGYKIDVSEQSYKDVIKGIEASPKIKSILFIIFWTIVTILILVLEYKYFYEV
1115249..1116088                   PHAGE_Clostr_PhiS63_NC_017978: gp31; GU337_05710; phage(gi388570658)                 1.49e-26            LactococcusraffinolactisMYLRNIAISADNKYRECSILGKSVPVDLVKGGRPRKRKENASRPVQKNLNYRNAQKWFRLSAVANFNEGDYTAEFTFAPEFKPKSVEECEKEIKNFIKRINRARNKKNLPKMKYLGVIEGKTSDNLHFHMILDNLLNRDEIDDLWTKGRGKNKKSIGFTHINKIKSQNGQDGVIIKANYLTKEFKLENQKGKRKWFSSRNLKKPVVERSQNWKYTDSKIARLLENDELEQQLEKDNAGWELIEFPRKNPETQKDELVKLDIRENEYLGTLIYYRMRRRR
1116092..1116504                   RusA family crossover junction endodeoxyribonuclease; GU337_05715                    N/A                 LactococcusraffinolactisLKFVIDIEPKPQARHRSTIKMEESAHTRTRRNFGKIILHIKRKSLNVGQTVRWSLSLFGHRNILQKLKRTRKRWKLKQRLWSQIWIIMKKPWMRMAFVIMMMARLRKRLRGKFIATILGLSLKYPKYAA
1116515..1116958                   hypothetical protein; GU337_05720                                                    N/A                 LactococcusraffinolactisMGQPEFTASEARLLEKLQEKKSLTGWPREIAKIVKVELRGLDYARNKLGGYGFISEERMTSETGDGTQVIKLSITDAGMQVVPIADGKGSERVNDDIKNLIANMGYTQKEIAEELGVHASTFKGQLNKSMSYEKRNKLINKIKQLCR
1116976..1117410                   transcriptional regulator; GU337_05725                                               N/A                 LactococcusraffinolactisMVRKKQELSRKTLSGLEEQMRLYPKIPRLKAEALVTAELSREHDVNWWIKGSRKKSEPPLEALMRKENNKAYQYYDQLEKDIDSTMSGLAPELQKLVRECFWGENSYYDWGTIGAVYMGVGVGQAYSIRYKILELFALHRGVLF
1117471..1117836                   PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; GU337_05730; phage(gi31415845)     3.18e-18            LactococcusraffinolactisMRNCKKEVPSKDGVSCIENLEEKMKTKIRETISGTEYWDSEEMKTIFVPKDEKPDFDLKDDLENKEPDDLQNQDKESSDDDQDKIDLKSMTVEDLKKYAKDHDVEIPKDVKKKIDIIELLL
1117833..1118201                   PHAGE_Bacill_phBC6A52_NC_004821: endonuclease; GU337_05735; phage(gi31415846)        3.52e-55            LactococcusraffinolactisMKYCDFNGCSCKISKGRYCPEHAASKKQRKKKDIYHHENKPFYRTGAWKEVADFVYQRENGCCQRCGKFVFGRQAHRHHVVPIRKNPLLKLEPNNIRLLCPKCHTIEENDSEDKKVFANYFK
1118303..1118728                   PHAGE_Bacill_phBC6A52_NC_004821: Terminase small subunit; GU337_05740; phage(gi31415847)     5.88e-61            LactococcusraffinolactisMAKLSKKKKLEIIEVARDEERKKIVKYLTDEELYYPSITPLLENYLDAFVIYKSMFDAWEDAGFAPTKLHENKAGAVNEMKHPLAQHVETWSDKKNKMLESLGITNKRKITQKLEKNDEKSLKLQSINELQAHREKWRGSG
1118725..1120449                   PHAGE_Bacill_phBC6A52_NC_004821: Terminase large subunit; GU337_05745; phage(gi31415848)     0.0                 LactococcusraffinolactisMIIEPGVNFADQYSKMVMKNKTRYPSSIIKAVKRYRKWKRRKDIWFEVDRANEMLDFVQSFVRHVKGPLAGQLMELELWEMFVFSNMYGWYHKNEKGKIVRVIRESYVQVPKKNGKTIIAAGALLYAMYGEGELGADCYAAATDYEQAQNAAEPISQTIENSEPLSRDTQIYKGINGTISGALYRYNIDGIAYQNKFKVLSKNTKGLEGKNPYFVLNDELHAQENMDMYDNLKSAQVSREQPMMLNTSTAGKGASSVGMRVYKYAKQVLDNDNDDSLFVAIWEPNKNYDWENRKVWKMVNPNIGISVTMEQLETEFKKAKQSAHSKAEFLSKHLNVFVNGANNFFEQEQVEHVLVDDLGDLTGDVCYLGLDLSKTTDLTCVSLNFPSFDINGRAILKVKQMYFIPNADIDFREKEDNVPYQDLSEKGFVTFCDGKMINQDQVLEYIIECMDTYDVQQLNYDPAMSQKLVEKCENLGLECIAVNQYPTVMNSMIDDTERIIYEKRLLTDNPLFIYCALNVVVVSNLNGMKAPSKRQSKKKIDGFVAFLVAHKETMMMMEDLNEDGIDDLISDIYK
1120463..1121665                   PHAGE_Bacill_phBC6A52_NC_004821: Portal protein; GU337_05750; phage(gi31415850)      0.0                 LactococcusraffinolactisMGIRDSFSNMLYRMAEKRGWVEDIYSQSIRYGGIFATDQNILSSSDVYELMQDISNQIALADIVVENENGKEIDDPVLKYLKNPNNYLTQFEFMKLMTNSYLLNGEVFPILDGDQIHLASNVYTELDNRLIEHFKINGIEIPSFMIRHVKNMGASHLKGVGILNIGKNTLNGVMSAEKVLTDKYAKGGLLAFMLKLDAHINPSNAAQSKFIKAILNQLEGIDESRTIKMIPLGKGYSIDALESPIDDDKILSYLNVYKKDLGKFLGVNVETYTALIKTDVEKGMMYLHNKAVKHIMKNFSEHLTALFFDKNSDKKIKFKINILDFVPYSTKTNIGYNIVRTGITSPDNVAEMLGFPKQNTPETQAIYISNDLTEIGKKKATDDSLKGGDDNSKEKGNEGI
1121628..1122209                   PHAGE_Clostr_phi3626_NC_003524: putative prohead protease; GU337_05755; phage(gi20065968)     1.21e-37            LactococcusraffinolactisMTIAKKKETRVFNITQLSTRAEENESSSIEGYAAVFNSKTNIGGWFDETIEPGAFARSLSENSDVRALFNHNWDNVLGRTKSGTLRLLEDAKGLNFHVDLPDTSVARDLSASMERGDINQCSFGFYVTEETWDYSVEPALRTIKEVDLYEISVVSIPAYDDTEASLVRSKELAQKVEVRKTLLKKIGNLLEEK
1122209..1123540                   PHAGE_Bacill_phBC6A52_NC_004821: prohead protease; GU337_05760; phage(gi31415852)     3.37e-150           LactococcusraffinolactisMNKQLLIALQKRNKQRLTDLRAKIEDPETREDELAEIKDEIDTITEELQSVADSLSELDDEDEDGDGTADDEPEDGDGTVDDEDRSADDEKRSAVSEQRSAAMAAVRDALSTRAAEPKKRNQAEIRSAFAKFVVGQISESEARALGIEAGNGSVTVPEVIASEIITYAQEENLLRKYGTVVRTAGDVKYPVLVKKAEGNVNKKERTTEILETSIEFDEILLDPAEFDALATVTKKLLAMSGAPIESIVVEELKKAYVRKETNYMFNGDDVDNLNPGALSKKAVAFNPTVAVDLKAADAGQKVYDALIEMKNTPVTEVMKKGRWIVNRAALTMVEKMKTSDGFPLLRPMTQAEGGIGNTLVGYPMEFTDAADKKGTPDVPVLYFGDYSSFHIQDVIGAMQIQKLVEKFSGTNRIGFQIYNLLDGQLIYSPFEPTVYKYEMPIGE
1123554..1123808                   PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; GU337_05765; phage(gi31415853)     1.50e-35            LactococcusraffinolactisMSLEDKLKKHIHFEEGMDNSMLSFYIENAKKYVKKSTGKQAEYLVIMVAGIMYEYRVAEKELSEALDAMTPFFVQEAFLDEEAD
1123792..1124115                   PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; GU337_05770; phage(gi31415854)     1.35e-13            LactococcusraffinolactisMKKQTNNLRWQAELMVISSSLDEQDRPIISRIKKRDVFYQDIGITAQEKYLSLQAKTDVVRRIKIRWDNTITEKNNGVRIAEIDYNITRIFTNSDTREMELSLSYVN
1124105..1124446                   PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; GU337_05775; phage(gi31415855)     8.80e-26            LactococcusraffinolactisMSINIEQLRRLLKAVNTRTFRGKAPPGIPYPYIVYSNISVGKKVASGKTIKLMPLYQVSLFTTGTEIDLLPLESALSNVPHTDFMSIQGDENDDTVTNFFTQIRLIEDLENVK
1124436..1124801                   PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; GU337_05780; phage(gi31415856)     4.75e-25            LactococcusraffinolactisMSSNNNGFQEMLDYTTRLAQVNIDKVSIESLENAASFFVEKLLPNIPKSLMNKKHMKDHVKIEIGDDRVTVYFEDTSFYWRFIENGTSKIQAEHFVEGTWQQHKETIQDIMSNELLKEMKG
1124804..1125445                   PHAGE_Lactob_iA2_NC_028830: major tail protein; GU337_05785; phage(gi971747639)      5.55e-30            LactococcusraffinolactisMANTDVFYFEGLDDVLFAPMTKKETVSTPPEYDEIVRLPIATKLKIKGNGSELEKWASSKMFRRVARETKHEIGLDHVGIPIEVMDELKGIVAASGVTFGKNNARELPYFAFGFIGNVEGGGKKAVWYPKTQLSIVIDEEYATAEDETKIDDVTANLVATGLINNGVIHSSFDSNRDSATGVSYEKFISAPIFDETQWAEIVAAQSGGTGGGE
1125445..1125903                   PHAGE_Bacill_phBC6A52_NC_004821: hypothetical protein; GU337_05790; phage(gi31415858)     8.35e-16            LactococcusraffinolactisMARLADYGIELDRLSNRSTVNIDGHDFPVVLSHEAIEYIGVVYGDDYQQFEKDLNSFLQRSRGKLTVSKIKSNDWKIIKALVYGMLAAGGLEDSPSDVFAWLGLRNETVQVFSKCMEIFSKNTFQVEDVKKSRKPQDHRKAKRKNNNQNPKR
1126092..1128401                   PHAGE_Lister_LP_030_2_NC_021539: tail tape measure protein; GU337_05795; phage(gi514051947)     5.36e-107           LactococcusraffinolactisMAKSKESDVVLNFKMDGQIQYAQTIKEINQVMNTAALEYKNHVSAMGNDATATEKLTASKKKLEIQLEGAEKRTQMLREEYEKSVKETGAYSEQSNKLYKQLINSETGENKLKNALDQTNEALKEQGNVSIDTAKKLEKIEEAGGKVKGVGQKLSVGISAPIMAAGAAGLAAFNDIDEQLDGIISKTGATGDEADSLAESFENVGSNTHLGLDVVGDAIGSVRQQLGLLGPELEQNADYAMKFAEINDSDVSTSVENAKQALDAYNLSNKDFQSVLDATTLASQKTGVSVDDLFKKSVEGAPQIKALGLSYSEGAMLLGQLEKAGVDSSATLGSLSKASVAYAKQGKSLSDGLNETQKSILGAKDQTEALTIASEVFGTKGAVRMVEAIQRGTLDLNDLAEASGNSAGVVGTTFDETLDPIDKANQAMNQAKFALADIGEQVQIALLPTFEAAISLLTRFKDWFSSLSPETQQMIVRIALVVAAIGPLLVIIGTLMGSITKIVGGVKAVQGVFSALKATMAANPFIATIVVISALVAAFIWAYQNIEWFRNGVNSFMGGVKDIFVQGFNFITGFLGSVFGGIEQNFNNFFNAGQRIFSGFIDFITGVFSGNWQQAWNGIVNIFGGIFDGIVAFAKAPLNLLIGLINGVIGGLNKIKLPKWVPGIGGKGINIDQIPYLANGGHLINGQAVVGEAGPELLSTQGGKTTVTPLSDEEKRKGIGGKVQGSVTVEQHNHFGKVDANNPSELAKMNRQLKQASVQAIIAKGGIPI
1128398..1129111                   PHAGE_Bacill_phBC6A52_NC_004821: Gp13 protein; GU337_05800; phage(gi31415860)        2.33e-09            LactococcusraffinolactisMTDFLSNDKPNFIFNGINALTDMGCIIEKELPDITAQPNIEEISVLGRSGSLLEWHGDYKPYDLPVGTVTIPYENLEEVKRWLSGSGKLITHNDIDKVIDATVSFSNATTFENEWGVFYNFSLTFHCQPLKHKSNEQPIDLHSKNTLFNPGTVPSYPIIYFETGGGSLEIVCNDVSLAIPSMLNGSVTIDCEKGLVIQNGRQIRTTGEWPEILPGENTMSVTGNYLDAEILLRSAWT
1129108..1131741                   PHAGE_Strept_9871_NC_031069: hypothetical protein; GU337_05805; phage(gi100017)      0.0                 LactococcusraffinolactisMIKKIYLYEQMPSNLEENGMPINDWRDLPEITRIINSTFSFYGNYQHEGMNAKLIKREMFIKAFTENGTYQYFRIKTAKKNLSGITITATHIGYEANRNFIQSAYIDNGNGKQIMDKLKESLAFDQKFSYESDVTTYHQFSAKQVNPIEAIIGSNNGKQNLAGVCDAELDMDNYTLILRERIGDDNGFRIDFGKNLASIEETIDDSSVVNRLYLIGGVPEDTNYDADQEPIIYAYLSVSGVTEENVQIGKRENGDCKTVEDLKKWGQSLFDKDRIHEPKVTHEVDMVMLENTIEYRGLYENMMSLRFGDTAYISLKSLDIEAKERMIEYVWYPTICKYKSIVLGNDLGMYTSSIETQVTNVRKNLETRSDELINAVINATNWITGSKGGYVRMRPKNAPSEILIMDKPDVADAKKVWRWTLGGLGYSSTGVNGPYGTAITQDGVIVADFIKAGTLEGVKMRAVDNDFAIQLFNGILKFTKKSGSSEAEMVAFAPTYTDAGLQGVNLIQNPNYSFGISSKGANGAFLNVLEVPKDSTAENRKLKLYGDVSVDGKLFLNGKEIIPGGGGGGDDGWNGVYPDIVKTQAEKFAWQAWATLRSLGYSEGASAGILGNINGEAGPSMNPDIDQIGGPAYGAVQFDGSAYPLVGTPTNDGREYFQRLVKASGVTGDYREMPTQMKVVNWTMTAGQWIGSVAPTSVDGFKAMTNAASAATVFERNFERPATTHPERSGYAQTWYNLFAGIPIPKADWRNPIRVPYIITQEWDQIGYGTGQIHGGIDVAPTGGATPPVYVAKAGKVVQIVPNHEVGGNYVVIEHDGYWTYYGHLANIQVSMGQQVTTDTVVGICGATGLATGVHLHFEVWKDTQWKRVNPRSVINF
1131759..1132568                   PHAGE_Lactoc_Tuc2009_NC_002703: minor structural protein 4; GU337_05810; phage(gi13487850)     1.53e-26            LactococcusraffinolactisMAKWKGVLSTTEPFNYIGILKVRHGNVNHETCQFTISENGVPVNLLGHEVYFQALLNGNPVEEQAKIIDGKNGVIEFTFSNRSMQALGKQTGYFQFRRGTQVVGTTQDFSYFVINAVGNTEIDTGAYWQSLQDLIDDMNSFIIHNQGDFTAWFESVKEILYGIDPGGKILQELIEARRSITGIVFESLKSRLEHDFQYILNEISQFYTLIAENGNLPRTIRDDMFSSNHTIVIVNDVVAPYSCDGLIIANIGTDESSRFSITKIGDFNG
1132873..1133127                   hypothetical protein; GU337_05815                                                    N/A                 LactococcusraffinolactisMFKLLYHDVIFYPKTNIAAVDGLYEALTESGIKGEKGDPGEQGPPGTAENLANATEQSDGLMSSEDKTQLTRLAKYNFVNKGEI
1133129..1133557                   PHAGE_Lactoc_WRP3_NC_027341: tail protein; GU337_05820; phage(gi849250972)           1.42e-22            LactococcusraffinolactisMANIVELQENGVPQYLKTHIKAVVGAYAVGDIHISINSANPSERFGGTWERFGKGRTIVGVDDSDSVTLMKTANNEGGKVNPLTAHSHKIRRSGGSVQSKIGATITWSDSPDNDGVIHSEGDNANHNNWQPFITVYMWVKKA
1133579..1133974                   PHAGE_Entero_EF62phi_NC_017732: holin; GU337_05825; phage(gi384519787)               1.40e-53            LactococcusraffinolactisMEKYLNVAKMIFGLVGGVISGIIGGWDALTHAMVFLLIMDYLTGVGKSIINKQLSSAVGFIGLFKKVLIFVVIAVSVEMQKIIGNGIPLREIVIMFYIANEGISLIENISEFIPLPQKVKEIFAQIKDKEK
1133975..1135303                   PHAGE_Entero_phiFL1A_NC_013646: endolysin; GU337_05830; phage(gi281416383)           0.0                 LactococcusraffinolactisMKKIKKTVAVLAFGLGLFSCSSQVLAAVGDQGVDWAVYQGDQGRFGYAHDKFALIQIGGYNGNGLYNQHTYSSQVQSVIAQGKRAHTYVWFDTWGDLGIAKQTMDYFLPKIQTPKGSIVALDVEDGVLASIPDGYGGYTSTAAEKQANTETVLYGMRRIRDAGYTPMYYSGKPFTLKHINYDQIIAEFPGSGWIAAYPNYDVTPAPNYNFFPSMDGIGIFQFTSTYVAGGLDGNIDLTGITDNGYKNGNPSKPNTETPAIEAGQEADKVKGTNKEIGMTVKVNFSSSIYATGEVIPDWVKGTSYQIIEKSGDKVLLDGIMSWLSVYDVETLDASTSGPTVNAGQTHIVQYGENLSSIAAKYGTTWQDLARINALSNPSIIYAGQTLSVTGGQSVVTSGYCVVEYGDTLSSIAEQFGTKVERLVSTNGISNPNLIYAGQVLKF
1135405..1135599                   hypothetical protein; GU337_05835                                                    N/A                 LactococcusraffinolactisMVIQFKYKDTGYTIIDGVMIAHSDHKVLDKIVATARTRGELINVGELSDEEYKQFVDAYKFAKK
1135695..1136738                   PHAGE_Strept_Sfi19_NC_000871: minor tail protein; GU337_05840; phage(gi9632906)      7.40e-12            LactococcusraffinolactisMLFILRRNRMKLRKCFIYCLAPILILGMFIFNPLKSEASSGGIIGDDYPTQWKNLPVSSGSDTWGYSIRNCTSFVANRLSTVNKFEVPRALGNGGQWGASAQARGYLVDSSPVRGSVAYFVDGSYGHVAWVAEVNGNAVTIEEYNYGIPLNQGKYHTRVINKSEATGYIHFKDMVNIDNTLGDWVTNTTWSEMNVGINDYYKIPHTLRWQYYDVNKKQWHEIQNGQSNWITLAVNKGQYLINVDVLDSNNKVLETKTMGTDGATSSIINGTNVTREANGEYLLGVSSNNPYMSYQIKLYNRNTGQWFTQFNSQWARFKPEAGVQYIVQFEIYGWNRLLDYKSFGFVG
1136970..1137875                   PHAGE_Lister_vB_LmoS_188_NC_028871: hypothetical protein; GU337_05845; phage(gi971750825)     4.02e-102           LactococcusraffinolactisMEIEKVKEDFIMAQYEMSIRYAGESLENGRMPIKDLAPALLAISGALQEIQRIKEPGQPTISVDVKATKKGSFVVDLILANGSDVFTKALDLFTCKESEAFLNLVGYSSLLIGLMKIIKYKAKKEEKLDNGNTKITFEDGKSITLNDSDLKVYTSVEFRTQIKRVVTPLDEDGIDSLELYSEKTEMITINKEETSLFDVPDVKEKVIDPVINEIYLQLLNVAFEHGKWKFSDGSNQFFATIEDADFMESVSKGNQQFSTNDRLKVRMRTVQKVTINGLKSEIFIEKILEHIPGAIQLELDF
1137921..1137932                   attR                                                                                 N/A                 TATTTTAAAAAA

#### region 4 ####
1500615..1501613                   PHAGE_Bacill_BMBtpLA_NC_028748: IS5 transposase and trans-activator; GU337_07525; phage(gi971482498)     8.57e-33            LactococcusraffinolactisMNLFGDSDYLEKLSSKGDPLERLEKVVDFECFRPTLNRIFKYDLKNKSHGGRPPYDLVLMLKILILQRLYNLSDDAMEYQMIDRISFRRFLKIDDKVPDAKTIWNFRNQLSKSNRGNWLFSAFQEKLESQGMIAHKGQIVDATFIEAPKQRNPKDENELIKANRVPVNWTKNKRAQKDTAARWTIKGNERHYGYKNHIAIDTKSKFVKNYQTTPANVHDSQVIGVLVDPDEITLADSAYQNQATPKGAELFTCLKNTRSKSLKADDKMFNKIISKIRVRIEHVFGFVENSMHGSSLRSIGFDRAVLNTDLTNLTYNLLRYEQVKRLNLKTWR
complement(1502409..1502482)       tRNA                                                                                 N/A                 GGACCTTTAGCTCCGTTGGTCAGATCTCTCGGATCATAACCGATCGCTCGTTGGCTCGAGCCCAACAAGGTCCA
complement(1502725..1503471)       PHAGE_Lactob_LF1_NC_019486: carboxypeptidase D-like protein; GU337_07535; phage(gi418489412)     8.34e-09            LactococcusraffinolactisMSDYKKSCEEQFFKLLKEVKFDKKFLSENETRLIYIFKRIYVINLLKNRVELNTIFDENFEESFSLLLETTFSLFSGQYRASLLLLRTTLESVLKFITIKEREFIKSKNPLVTFEKIDYRFSDTKRKLLNDIGNNIYRYPDYSQTIEKSVTYYKNLSSVVHSVNKKKLLSFSSFYLDLQDETLVEKEYFFKLHTDTLNNIFTLLFFLSRKKFKNWDTYDLQNILKVMFKKENQIKKYMNYVKLSPYNP
complement(1503475..1503897)       PHAGE_Lactob_LF1_NC_019486: hypothetical protein; GU337_07540; phage(gi418489413)     3.69e-10            LactococcusraffinolactisMEGTKLVVIKDYRREFLNLNSSKFSKEKSVSIFIGTIFLLLTDKEIFKKNIDIRDFLKVILKKEYKDYLFKSRPYLSARVLNDITKEMSYHEIINTAMNIAEYLEQDIYIKQDTSNKRLKNRPEENIIGWVNQIHDDKSL
complement(1503903..1504886)       PHAGE_Lactob_LF1_NC_019486: chromosome partitioning ATPase; GU337_07545; phage(gi418489414)     7.28e-53            LactococcusraffinolactisMGTVISFINLKGGVGKTTSAINIADELSKNYKVLVIDMDPQFNATQSLLNYQISHFESEVPDDILSLVDKKFNNENYEKIVDDNSTKLNIKSQIIYQVLKEEKVTVNSLFIKDSVVTGIISPNLTYKIKDNLSLIPGNLDLFSSLNGDSVGKHNILEDHFNEYNLRNEFDYIIIDCPPNWTILTQTSLFASDYYVIPSKVDLFSSIGIGLLEKLVNETYHNKSSNLYSTYNMFRNNQNRNALKPLGVLFTLTNESKISNTIKEKLKKEIINIKFLNSEIPYQDSVALKFSLYSEAGEKHIKVINALEKITTEIQDLILADTKVNYKR
complement(1505325..1505495)       hypothetical protein; GU337_07550                                                    N/A                 LactococcusraffinolactisMAENKHVRKSIIYKIVLTLLLLSIFTAAFLFSEQEWIINTLSIIFLIVLWFPRKSN
complement(1505578..1505901)       PHAGE_Lactob_LfeInf_NC_029058: hypothetical protein; GU337_07555; phage(gi985757346)     1.12e-14            LactococcusraffinolactisMSNIHAVIYTKPHCMPCKMTTRLMDSLGLPYENTYYGNSEQTNSIELDSKDESKRTWSEKKVEKLKEKYQITSLPLIKIIDDETGEELEFWSGFQPTKIKSWNSKVG
complement(1506206..1507471)       PHAGE_Lactoc_ul36_NC_004066: putative lysin; GU337_07560; phage(gi21716129)          5.88e-172           LactococcusraffinolactisMKKIKKTVAVLAIGLGLFAYANPAFAAVGDQGVDWAIYQGNQGQFGYAHDKFSISQIGGYNGVGIYWQSTYASQVQSSIAQGKRAHTYIWYQSVTNTTLAKNILDTMLAQVQTPKGSIVALDVEDGVANTEVILWSLQYIKDRGYTPLLYGYKHFLTNNLDLKRISDKFGLWLGEYPDYNVTPVPNYNYFPSWDNIQIFQFTSTYVAGGLDGNIDLSGVTDNGYKNGNPSKPNTETPAIDAGKEADKVKGSAKEVGMTVKVNFSANNYSTGEAIPDWVKGTSYQIIEKSGDKVLLDGIMSWLSVYDVETLNASTGGPTVNAVQTHIVQYGENLSTIAVQYGTTWQELARINALSNPSIIYAGQTLSVTGGQSVAKSSYCVVEYGDTLSSIAAQFGTTVEHLVLANGISNPNLIYAGQVLNF
complement(1507472..1507681)       PHAGE_Strept_Dp_1_NC_015274: holin; GU337_07565; phage(gi327198372)                  2.20e-13            LactococcusraffinolactisMKFPKLTNGQYDRIKQFLLMVVPGATAVITGIGVMNGFGTEKITGTIALLATFAGILLNWIAGKYDKEK
complement(1507687..1507929)       PHAGE_Entero_phiFL4A_NC_013644: holin; GU337_07570; phage(gi281416487)               4.13e-13            LactococcusraffinolactisMQKDDENSIWFEVLQRLTKIETNTEGLNEISGIARNALAKSEENARDVEEMKENQKWAWRTIAGIGVTFIVYFITKLIER
complement(1507944..1508732)       PHAGE_Lactoc_BM13_NC_021861: base plate; GU337_07575; phage(gi526244867)             4.55e-21            LactococcusraffinolactisMALQGYQFDKAKVTPEADAALYSYLAQSSDNKVISGLTVTATGLNVYVASGKALVQGRLVEVTQQHQLTAQANKSGYICITVDLTQDNTSTGTPGTSNYLPVNNQLRIELVEVLNQQDLNSGGGLIYTFPLYSYVSTGTSVSLTKTDRGFDNATIAYFSSTDTTITFTAPWDCTVEIYLTLHGWGFGGGGWGIGIDTPAGLTKLYEAIGYTEGHNSQAVAMSASAGFSNLRKGQQYSFSRKDVIGGAGGLKYTSAVAKLNRI
complement(1508746..1509789)       PHAGE_Lister_P40_NC_011308: gp16; GU337_07580; phage(gi207270790)                    2.35e-41            LactococcusraffinolactisMSEQVNIWIIDRKGAITQEPIVVSKAAIQPDYITQDASTFELPDDASFVRGDFILAKVMYSSAISFFGVISSYEDKKVVAKDLLGLVNFEFPATRMSGPSFEQHFKNLINRYLLQDASKNLNILDIEVLTNTPHIYQPTDPPTATNLMSYTINGFKKYNVVWRFDKFENGRIKTVIEAITDTMQLKDNIADFQDWEVSTTEVGKNTQNHLLIVNKNTTNSEGPNVLAERYLTTNNDITSNYADPAVFKPTTTKVAIYDTTATDKPSYDDLANSELKGNYYSHEISFTMSKANEFFSVEKLKLGMLATIYKNGKIYKSVLTGYEYPSDSDRVKLKFGHVKSRLSELLN
complement(1509786..1511177)       PHAGE_Lister_P35_NC_009814: gp15; GU337_07585; phage(gi157325380)                    1.82e-14            LactococcusraffinolactisMIRKISILNEKGDLLDFSDREKFLLYDVSGLGVEFDNKVDIFNASVLMNSQNLKLGQLKAKLLVGQNSVNGYEIFSEMFRFLNSPPYTVIYETDTGVFYRDCVLNKLTKSDMKKGRVFIEDIIFDFLTPFYKEISETYKPNSDTEGDGKIYAGDSKPRNLIANPNFLNNMESWDNTSDPEGTYQLQAPASDKPNSNILKLTSSNNKLSSFINAWGLKVRKGDRLSFRVDIKTDNNPDYDRPVIRVGYGTGEKNYKYSDFGITASSSGFKTATISFVVPEDGVFQLYLINQNWSTLSAMSTYFREPMLTRGDVSDMPSDFYSGKPSNNYYAYPFVYESDYNGKSGVFQIENNSVYIGSAKGSPVEITVHGPCTNPYWEILDGSKVLQSDGYNVDVPDGYKLVVSSIVQNQRMKLIAPDGTISDVYQQQDLSRSNLIAIPEGYVTLAFHNVGDVSFVYREEYITV
complement(1511179..1513443)       PHAGE_Microb_Pikmin_NC_042119: hypothetical protein; GU337_07590; phage(gi100017)     0.0                 LactococcusraffinolactisMAFNIFELSGKISADNKPANDAIDETTGKAKESGSIFSTLGNGLKVVGAGMVAVAGVAGAAAVGLSKKVIGAYAEYEQLVGGVDTLFKEASSKVQGFADNAYKTAGMSANEYMETVTSFSASLIQSLGGDTQKAADVGNQAVTDMSDNANKMGTDITNIQNAYQGFAKQNYTMLDNLKLGYGGTKEEMQRLLVDAEKISGVKYDISSFADVTEAIHVMQTQMGITGTTAAEAADTISGSIDSTKSALTNLWAGLGNPKADVQKLVNDVTNSLGNVVKNITPVLNNIVTALPTLINGVVSAIGGMLPNLLQAVTSLFTQVLQTILTLLPSLIPVFVNALMTIVQAIISNLPLLISAAVQLVTTLVQGIATALPTLIPAAVQAVVTIVQGLIDNLPLLLDAGLQLLTGLLDGLITAIPILIAALPQIITILVTFFVTSIPIIINAGIQLLTALVTALPQIIAAIVAVLPQIINGIITALIAALPQLINAGIQLFLALITALPQIISAIAGAMPQIINGITSALIGNIDQIINAGVALLVALVQNLPQIMTSIGAAIPQIISSIVTALGNGVGEMARAGLKLITGVKDSFTNIDWASVGSNIISGVAGGITGAATELLDAAGNAAGNALDWMKKKLGIHSPSRVFRDEVGKFIPAGIAVGIEQEAYTMQDALDTAANGLTFDTGNLGANIIDPAQVSMQGSTQQMNFGSNSGTNDESLSLLRLMIAKIEEILNTKFNIYLDKTLISKEIEKSLVRGV
complement(1513433..1513681)       PHAGE_Lactoc_1358_NC_027120: hypothetical protein; GU337_07595; phage(gi824479768)     3.13e-05            LactococcusraffinolactisMLSTIKWRDVPDFLITMFEEQSNDELWRIYLSNPLREDTFNDFKQKILESNRPKEQVEQEAQAAARHALDMLDSVGGDSFGI
complement(1513750..1514271)       PHAGE_Entero_phiFL4A_NC_013644: hypothetical protein; GU337_07600; phage(gi281416480)     1.29e-10            LactococcusraffinolactisMTNKLTDEQIKAAELKKAEKNTKIKERLLGYKMRELQADDIFKIIEIVNILNVADLVTEFLKQQDAAKIKSQKMQGLSVIASQSDDNKKESLTDQIKTIQQDISSQSFEYVSKAAKFVLVHSAEIKIELNGLLADLTGKTPEEIGKTNIVTYSLLVKDFFVKPELREVFELLS
complement(1514268..1514510)       hypothetical protein; GU337_07605                                                    N/A                 LactococcusraffinolactisMKYKVIYPFIENGKKYWSGDTYANDDKKRIKALASTANKIGKVLIEKIDDTPKEKAEVETTKKVDGAPETSETKSEGKTK
complement(1514566..1515186)       PHAGE_Entero_phiFL4A_NC_013644: hypothetical protein; GU337_07610; phage(gi281416479)     5.60e-31            LactococcusraffinolactisMVTTSETLPKSGYTADTPKRYLLNAGALVRNLTWDSSVLKWSYDEFGATSGGSKLTLKNNLRQVEVDGVFTTPVGGDMIESSEGTFEINVIEHTRDNIKMSLFANSKDSSGTDFPDGYDVITPKQKIDATDYIQNLAYIGTISGSDKPIIIIMTNAICTSGLEIEVKDKSEAVVTLTFDARTPAGDVSTTSLPVTILFPKEPEGEA
complement(1515187..1515564)       PHAGE_Entero_phiFL4A_NC_013644: hypothetical protein; GU337_07615; phage(gi281416478)     1.02e-19            LactococcusraffinolactisMIDLISELTTAFRTVVPESFYLKNNKETVIYPYLTFSYTGEPLAKNIKGFYLDVDIFDDKGKDNERIEQAMSQLVDFVDNDDNRIMTDELFIRFDYIKPNPIPTNSDTLQRRYAQIYVRADWRNK
complement(1515564..1515962)       PHAGE_Entero_phiFL4A_NC_013644: hypothetical protein; GU337_07620; phage(gi281416477)     1.09e-25            LactococcusraffinolactisMVFKDNSMEGKERLKKAAAKWLLQACILVEGQAVLLAPVSTSRLKQSIDYIVDDDELVGYVGTNVDYAIYVEFGTGEFAENGNGRKGGWMYIDPSGEWFFTWGIEPQPYLRPAFRQTKGQIEALAKSIFGEV
complement(1515962..1516279)       PHAGE_Entero_phiFL4A_NC_013644: hypothetical protein; GU337_07625; phage(gi281416476)     1.06e-10            LactococcusraffinolactisMMATFFVERYAEVGLNRLKEPIYQWQRDSDPVNGWFDMLTGDEASSTNSFIAESSHIFVTEDVTLDVSSQCRLYNNKSGLTFEITYVDNPVELDHHLEIYCKRVV
complement(1516276..1516806)       PHAGE_Entero_phiFL4A_NC_013644: hypothetical protein; GU337_07630; phage(gi281416475)     2.49e-53            LactococcusraffinolactisMIIDLETAQQIKADATQEELDGLEVAIRNYTNNNFQVRNVRLEDVVFTSSSITSPDSTLGFKKGNTIQVSNDKYNNGLYFIEAVEDNGLTFETDSFIPHKATDTLVTLVKYPADILFGVQKLLKYSAKMDDKIGVKSESISRMSKTYYDVNATENIEGYPAALMTFLNKYKKLRWS
complement(1516837..1517118)       PHAGE_Clostr_vB_CpeS_CP51_NC_021325: hypothetical protein; GU337_07635; phage(gi509140049)     2.97e-07            LactococcusraffinolactisMKVRKENRVLTVDEADKAFYLSEGYDVVEVENGEYVVSEKATGGRTYTIAEYSKLEAENAELKAENTSLKAATKKLKAENTGKNTEKSEKAEK
complement(1517130..1518044)       PHAGE_Lactob_KC5a_NC_007924: putative phage major capsid protein; GU337_07640; phage(gi90592614)     1.11e-105           LactococcusraffinolactisMPAILNYAEAYQAGLQQRYAANGLLYTQKLWNSPSNSVLKFSGTKTIKVPKLLIKNGRKDRTRRSITAVEANYENQWETYELTNERYWSTLVDPIDVDETQQVTSIANITKVYNDEEKIPEMDKQMVSSLYARKVTLATDGSGIETVTLTKDNFLPTFDKLMTEMDEKGVPTTGRTIFCTPTVRTLIKNLQQFSRTVPVQNNTGDINRIIARLDDVTIEPAIPSDRMKTLYDFTTGAVVDPTAKQIQFFLIHIPCMAAPQKYSFVGLDAPSAANSGNWLYYEQSYDDVLVFETKHDGLAFVIEA
complement(1518062..1518625)       PHAGE_Entero_phiFL4A_NC_013644: scaffold protein; GU337_07645; phage(gi281416472)     7.09e-46            LactococcusraffinolactisMEWIKTILAKHLKEDGTLDIEAANKEIDSEFPKNAVPKDDFNSKLTELKTANDTINKLQADNKDVETLQTEITDYKSKVAELEAAQDATATRSILEKSLREAGAKDIDYLLYKMGDVEKADDGSIKDLDNKIKDLQANFTDQFEAKGNNSEGFKTIENNLNDGKQSDPDLTAQMISAFTSDIPTTEK
complement(1518996..1519214)       hypothetical protein; GU337_07650                                                    N/A                 LactococcusraffinolactisMDKFELLEAEYEQHFKVPFPTRIIGFWDPLHDSVEYIESEGFEKMKSAVDNAISKNEPLEEIPKDVWGNVIF
complement(1519218..1520921)       PHAGE_Entero_phiFL4A_NC_013644: phage head protein; GU337_07655; phage(gi281416469)     1.55e-52            LactococcusraffinolactisMNKYQSEIEKLLQKSEQDLSKELLKAYQSVYNEVNDQVRQLVEDTEKLNFSQKMQAERLKLIKQQLQINIDELQSVNDRKIYNFLDTTARLGYNELFYEFEQTTGIPISFSMLDTKTIETIIQTPVASHKLSTRLQGNVTKLKQSINQELTRGFAKGLGYNKMAQRISNVGDAKYRRAMVIARTEGGRVSAITRQKSQDDITAKGVEVEKQWSAALDMKTRSDHAQLDGTTIPIKEYFKVSGYKALQPHMFGEASEDCNCRCRTISVIQGYEPKLKRDNETHGVDEYKNYSEWLGGKENVVNSNKKAYTGTKDIEAIKGYMSSIDFSSASHTEITALGSLVNSKFEVSSKLGDKAALKKIFSNFREIGGVVPKDGWAKGSAKDSKSRLAEAFSFYPKEWAEYAHVNGKTIYSKNVDRGFFSSVGVKGKTWRSGIVDNGISIMLSKNSNTVSFHEIGHYVEHFNPDALRLSKEFLAYRTKGEQEEPIKNMLYWYGVNEKTKKDNFITPYIGKTYPNATEILSVGLESLFEPGKGKIFSQTSRRSEVVMKKISDDPEYLNFIIGMILKG
complement(1520914..1522368)       PHAGE_Entero_phiFL4A_NC_013644: portal protein; GU337_07660; phage(gi281416468)      4.89e-158           LactococcusraffinolactisMDIKYLKSDNPSVLSRFIDDAVKTDRQSPIKEKMSEGLKYYDYKHDILKFRLFYYNEDGKLVEETNRSNIKIPHAFFTEQVDQKVQYLLSNPVEFETADTELKTYLEEYIDDDFQLMLQEMVEGASKKAYEFAYVYRATSGKLLFKVADSRKVVVIYDDMNEVIAIIRYYDTDITKDNRKVTVTKAELWDTEKTWFFVSSSDYNNRFILDESQEINPRFHQVVEDSDGNLLGKGFGYIPFLKLSNNKNEKTDLEPIKALIDDYDLMACALSNNLVDFDHPIYAVKGYGKDNLDELVTNLRTKRTVGVSQDGGIDVKTVDIPVTARKTKLETDKEAIYKFGMAFDSSQVGDGNITNIVIKSRYSLLDLKCNKTEIRLRAFIKQLLDIIIEDINERYQKSFTRQQIEVVITRSTMINQSDNAEVEKLEAETKGQLIQNLLDVAPYLDDESLLKKICAVQELDYDEVVQRLGSQDFSPSKKDVIDSE
complement(1522383..1523645)       PHAGE_Brocho_NF5_NC_015252: gp2; GU337_07665; phage(gi327197586)                     0.0                 LactococcusraffinolactisMVKKLSELIPQAFHSTWRAALNSSILNIIEKGGRGSGKSSDIAHIITQLLMRYAVNAVGIRYVDNTLEQSIYEQMKWAIEEQGVTHLFKFNKSPLRITYKPRGNYMIFRGAQNPERIKSLKDSKFPFTIGWIEELAEFKNEDEVTTITNSLLRGELVDGLFYKFFYSYNPPKRKQSWVNKKYESSFQPANTAIHHSTYLDNPFISKEFIEEAEATKARSERRYDWEYLGKAIGSGVVPFDNLQVVPGLITDEMAANFDNIREAVDFGYATDPLAHVRWHYDKKKNGIYAIDELYGQKISNREYAKWLHSKGYASDVIFADSAEPKSIAELKTEHNVPHIKGVKKGPDSVEYGEQWLDDLDFICIDPLRTPKIAWEFENIDYQTDKDGNPKPRLEDKDNHTIDATRYAFSEDMNKANKWLV
complement(1523638..1524069)       PHAGE_Brocho_NF5_NC_015252: gp1; GU337_07670; phage(gi327197585)                     2.59e-56            LactococcusraffinolactisMTMTEKQKKFCDYFIETGNATKAAIFAGYSQKTAKQIGQQNLTKLDLKAYIDERLKQLEDERIADAAEVMKFLTSVMRGEVTEPVAILDGDGYQKVVELKPSVQTRRSAAVDIGKRYALFTDKTEMTVTEVPIFVDDLGVPDG

#### region 5 ####
1524191..1524203                   attL                                                                                 N/A                 AAAAATTTATCTA
complement(1526332..1527330)       PHAGE_Lactoc_Tuc2009_NC_002703: replication initiation protein; GU337_07695; phage(gi13487815)     4.51e-27            LactococcusraffinolactisMAKKRMFSADIVRSDLFLDLPISSQLLYFHFGMIADDDGIVASIKRELSYLGFGSLDDLKCLHDKNLVEFTDDGKILFIIDWRKNNSIRNDIYKPTFYLEARENLENKGFSFKGSKSVPSTLHERNGDVSLDKIRLDKDRLDLDIDKELVSGINQPTLDQIESVSESETLHNTQIKNKFIEYSDLYPKKTKKREAFEVFKNLSEAEISKLMIGAKNMATVAKNLTADDFKFLKNQATFITDEAYLDYLTLKPTAPPGSETPDWAKPKPPEELSESEKYEIRIRRIQRLIRLGKPDSEIVGGSNKFTIEEIAEAKKQQADLEKIRLEALEKMN
complement(1527332..1527523)       hypothetical protein; GU337_07700                                                    N/A                 LactococcusraffinolactisMENNIKHNVVIDPLEFFNKHDIVVKKLAYLDVNFRNKNMEFLVKDIEDISTYIKWLETQILGG
complement(1527734..1528534)       PHAGE_Strept_315.3_NC_004586: hypothetical protein; GU337_07705; phage(gi28876302)     1.78e-118           LactococcusraffinolactisMGKDLLGADYYSVESSRAYWSISQYKRFRECEARAMAELAEEWSEDRDSTPLLVGNYVHSYFESQEAHEVFKSENGSTMIAKTGATKGQLKKDFKIAEIMIQALQSDKQFSEYYVGEKEVAVTGVINGTDFKGKIDCLNIESGYFVDIKTTKSQIDDLVWSDEYRTKMRWFEAYGYVLQMAAYKELLYQQYGKEFTPIIYAVTKEDVPDTRAIVFQSDEKLKYELTELSTMISKLDAVKKGLAEATPCKHCNYCKSHGLTDKVEIY
complement(1528534..1529571)       PHAGE_Lactoc_50101_NC_031040: hypothetical protein; GU337_07710; phage(gi100011)     1.53e-39            LactococcusraffinolactisMIENNEIKVNYTPSVIEIDGRSEIEKEVSELVEKSKNYVVTVETITDARDMRAKLNGMFNTLEDRRKDVKNKINEPYDEFKKVVDEIEAPIIESISELDYKIKEADEVIKSERAEIVRNAFVEFTDKTEIDPRIFENRINEFVKAANFTKMNNLTKSANEGILAIVTDEVARIEKIKTDKQTISRFAELSNLSDTSYIRFYDQGRTVDEITKFIKDDAAAEAELDRRRKEREAAAKEAQAELDRKKQEYETSRLEKEMGVTDQPLTTPPVINQPSQSSQIIGKVDPVYHAPTNSPAPQQPKSNYPARLQITIDLESQERKDEFKALLTANGFGFKVDSFKTIGDE
complement(1529573..1530391)       PHAGE_Strept_9872_NC_031094: membrane-associated initiation of head vertex; GU337_07715; phage(gi100034)     2.77e-104           LactococcusraffinolactisMTNQVMTTKSYFNTPAVQNKFSEVLGERSKQFVTSILSVTSDNKLLAKANPESVMKAAMKAATLNLAIEPSLGFAYIVPYGNNAQFQLGYKGLIQLAIRSGQIKNINSGIIYASQFISYDPLFESLKVDFSQEPSEEIAGYFATIELINGFKKLIFWGYDKVYSHGKRFSKSFNNGPWKTDFDAMAQKTLLKALISVYAPLSQEMEQAVVFDDKTEDKMSQPVDVTPDTSPDTLSDLIGTNTPEVTESSEPIEDLGVMVQPGQQTGLGIEDF
complement(1530543..1530764)       hypothetical protein; GU337_07720                                                    N/A                 LactococcusraffinolactisMTQFEVSQHAKLLANNEGQSREIKRLQVEAKHMRLAFRDLDLYCGQLEAENERLKAKLARYEMLETATKVWGY
complement(1530776..1531009)       hypothetical protein; GU337_07725                                                    N/A                 LactococcusraffinolactisMALDLSDGNWISKKKFKEEFDLGETAYQTRMKAMTAGDSEFKNGYAKVNRQEVYINRKIYNAWKSAEAEKNMIWVDY
complement(1531082..1531267)       PHAGE_Strept_315.2_NC_004585: hypothetical protein; GU337_07730; phage(gi28876251)     3.04e-13            LactococcusraffinolactisMWNKLKKILDEKQMTTYQLSKLTGISEQSFSKLRNGLSKELSFGSMVKIADALDISLDEFR
1531460..1531732                   DUF3892 domain-containing protein; GU337_07735                                       N/A                 LactococcusraffinolactisMSKNKITHIRLSSEYEPTTDKITQVKLEDGTVESISQVVLYIDNNHFYYYVNSFGNQIEVETVHPNGILPYIRTKANSTTKDNLLSLPRF
complement(1531740..1531940)       PHAGE_Lactoc_98201_NC_031064: hypothetical protein; GU337_07740; phage(gi100007)     1.11e-12            LactococcusraffinolactisMNNFEQKLVEILSRLANGYIEPVEFCVSNSPSKTIGKVTQTVSFFYDIPEPDTDIFGNKIPVKIDE
complement(1531955..1532146)       PHAGE_Lactoc_bIL312_NC_002671: Orf6; GU337_07745; phage(gi13095897)                  8.60e-28            LactococcusraffinolactisMPVDDHGLNLVNEFITTNGIEKMSLAAKYDVAKNVMIDTLSGRLRTPQAHKIILKIIDDFKLR
1532257..1532823                   PHAGE_Oenoco_phi9805_NC_023559: hypothetical protein; GU337_07750; phage(gi589286212)     8.49e-09            LactococcusraffinolactisMKNKTDNKFKVQISSIISGIAVLISLSSLLYQVNINSKAIENQNTKEKRSQAINVSMWYKTITPISRDDKNIIINNANSNAIYDVFVIYVSNRSPGKLSDIGLITQYGDNLRNNCQFIEVLPPGETKLAMNLPRAMGGEHATPEIFFTDSNGKSWFRNLHGNLLESKSLNQLLPEYKIPAPYTQYSPT
complement(1532964..1533746)       PHAGE_Bacter_Rani_NC_029084: DNA-binding protein; GU337_07755; phage(gi985759364)     2.79e-91            LactococcusraffinolactisMNQLITITTNGNDEQLVSARELHKSLEVKTRFSQWVTQNFKGFREDIDFSSVVTTTQQNQYGGTKELQDYALTVEMAKHIAMMTGTPKGYQVRDYFIQVEKAWNSPDMIMKRALQIADKRVIKLQNEKNQLLLESSVQKQQIAELQPKASYYDLVLQNKSLLSVSKIAKDFGRSAVWLNRYLHELGVQYKQGDIWLLYAKHQDKGYTQTHTHVIDSEKSRVTTKWTQKGRLFIYDLLKNQGILPLIERQEVGSSRESALA
complement(1533759..1533965)       PHAGE_Lactoc_PLgT_1_NC_031016: ribonucleotide reductase A subunit; GU337_07760; phage(gi100062)     4.23e-35            LactococcusraffinolactisMTEQALEKMRSAVNKYREESGISIKTLAFSLEGFSEQQLRNVLNKTDGGPKAVEMLAKLIEIYPIKIT
1534252..1534584                   PHAGE_Lactoc_PLgT_1_NC_031016: aerobic ribonucleotide reductase B subunit; GU337_07765; phage(gi100063)     2.16e-31            LactococcusraffinolactisMTTFERIKFLADKQKISLQKVSTDVGLSENAIYGWKTRKPKGEDLAKIADYFHVSVDYLLGREEQPAPRFSPELLDAIDNAEGFSGKPLDDHDKEIIKGLLAAYLAGKNK
1534598..1535032                   PHAGE_Strept_315.5_NC_004588: putative cI-like repressor, metallo-prtoeinase motif; GU337_07770; phage(gi28876433)     1.58e-07            LactococcusraffinolactisMDYHDILRESGIVLIWAPELHDKGLYVPYAEECGSDNGIIFVDSTLSEDETECAILHECGHKIKGHTLSKLSAPQLHIINEAKANRFMISCKAKDYLEEIDYHVYYYTPERFLNRFKLSVENFYDMAEQEMEKVAFEYRTQLIY
1535087..1535461                   PHAGE_Lactoc_ul36_NC_004066: hypothetical protein; GU337_07775; phage(gi21716074)     3.13e-76            LactococcusraffinolactisMIDFNNAAFIKLKPVDDNAFTNLISPIFVTGESILGTYKGIRDGVVFTTHRIIAINVQGITGKKKDFTSLPYSKIQSFSIETAGTFDLDSELELWFSGLGKVKLEFSTQANVSEIAKIISEKIL
1535571..1537223                   AAA family ATPase; GU337_07780                                                       N/A                 LactococcusraffinolactisMWANKIELHDFRAFKNNFEMELAKNITCISGHNGIGKSTILAVLSNCGELKKNVETQLNGAAFRGDFSDIIIGDEKFDSIGDKAKIHFSDLPQKKYNFNGFVPELEFRATFQDKSDGSNQKRYRLLPKKIPDIRLSVSKLIWPTIYLGLSRLYPVGESEKTTSKKLPTDIMSELLSTHQQILGMKYDSNAEMKIIDIKENGGKNKTGVDTSLYPSTSNSAGQDNIGQIILSILSFKRLQISLGSDYFGGILLIDEIDATLHPAVQFRLFDYLLKQSKNLDIQIVFTTHSITLLEHISKQYKNKSYDIKTCYLQKRTSSIEVKENPSITLLKNDLSDTYSGYGRPKEKIKLLTEDDVARWFFKLLLKYSQKEKDFDFDILDIDIGWQHIIKLFKSDPSTFKAYIALLDPDIRKTENEKWLIENTYSTIFRDYDTSKSSIFRLPATTENPEYIEKILWDYVSTLDDDAMFYKHDVIVENNWQKHLVISHGPDSQIYEKISKENVRIKHWFNDNKEYLEIAVYYWMKDNEILVNKFLNDLLQAYKYKSSNITK
1537274..1538143                   PHAGE_Cyanop_P_RSM6_NC_020855: DNA methyltransferase; GU337_07785; phage(gi472341588)     9.79e-22            LactococcusraffinolactisMPKISSPFRYPGGKSQLYPYIKHLLEINNINGTYIEPFAGGAGVAIDLLLHGDVKQIVINDYDKSIFSAWNVIINHSDELIEFLKTIPVTYDEWLNQKRIHEETKSDSTSINGGLATFYLNRTNVSGIIKGGPIGGKKQTGKYKIDARFNRKKLIEKVQIISRYKEKIILMDKDANELTSIIKDNYNPKNTFIFFDPPYFAQGKNLYLSFIDSSEHLKLFNNIKKINDFSWIVTYDTADEIKKIYNSVNQKFIYSLNYTANNRRKAQEFLFTNSNLKIESYKNIELIQL
1538022..1538034                   attR                                                                                 N/A                 AAAAATTTATCTA
1538281..1539411                   PHAGE_Lactoc_bIL312_NC_002671: integrase; GU337_07790; phage(gi13095892)             1.89e-52            LactococcusraffinolactisMWIEQKSNGKFLFREKFIDNLTEKEKTVSVTLDKNTRETRSKAQKLLLTKIIKLKQNESRKIVPITFKDLAIKWETFYVKQVKDNSRLSIKANLKILIEAVGPESIVHKITTVYLNKKIENLVFGDRDISESYAKILKTRLKAIFEYGISHGHLKINPAVSAVIPKKIKDATMVTEFYLESNELKSLMDYLKGHNTRYYLLCQWLYLNGLRAGEGSAMQKSDVIISDDRQYCKVTGTLEYHGRKIADQVKSTETKTASGMREVDLSKKAIEIYREALSLSPHSNFLFTTSNNTPIQINALNAYLRAHKEEMGFDRNRKISTHIFRHTHISKLAEIGVPLHVIQRRVGHSSEKITREIYLHITNKMKSDTKDLLELL

#### region 6 ####
1721051..1721062                   attL                                                                                 N/A                 AAAATAGTAAGT
complement(1730069..1731322)       PHAGE_Aeromo_31_NC_007022: hypothetical protein; GU337_08705; phage(gi66391812)      1.00e-139           LactococcusraffinolactisMIFDQPNYEAFDQELWDAIHAEEKRQQQNIELIASENVVSKAVMAAQGSLLTNKYAEGYPGNRYYGGTECVDIAENLAIERAKELFGAKFANVQAHSGSQANAAAYLALIEPGDTVMGLDLAAGGHLTHGSPVNFSGKTYNFVGYNVDKETELLDYDQILAQAKAAQPKLIVAGASSYSRTIDFAKFREIADAVGAKFMVDMAHIAGLVAAGLHPNPVPYADITTSTTHKTLRGPRGGLILTNDEVLAKKINSAIFPGIQGGPLMHVVAAKAVAFKEALDPSYKDYQAQVIKNAKVMAETFENAGLRVISGGTDNHMFMLNVTGFGINGKEAQHLLDTVSITLNKNAVPYETLSPFKTSGVRIGSAAVTSRGFKEAQATKVAEFIIRAFQNKDDQAALDQIKSEVIALTDAFPLYEA
complement(1731312..1731938)       threonylcarbamoyl-AMP synthase; GU337_08710                                          N/A                 LactococcusraffinolactisMTELLFPQAPQDVQRAVELIKSGQLVALPTETVYGLFGLALEDHVVKNIYDVKHRTYDHALNLNISNFDEMKFFSQNQPKYLEKLYNKFMPGSLTIILEANEKVPSLVNNGMNTVGFRVPANQTTLAILRQTGPLVGPSANLTGNPSPKTAQDVLTDLDGQIAAVVKADESISGIDSTIVDLTGKTPIILRQGALTLREIIEEIKDDI
complement(1731931..1732746)       peptide chain release factor N(5)-glutamine methyltransferase; GU337_08715           N/A                 LactococcusraffinolactisMTYLQAFQKYEKQLTRPEELRYVFRYGRKLSYTDFILLLNTAITEADQAYLAEIFKRLSQDEPAQYIVGETEFHGLTLDVDARALIPRPETEELVAVILAENASDNLKVLDIGTGTGAISLSLAKAQPTWQVLASDISPDALALAQQNATKNAVANVGFTRSDVFSNVSGNYDIIVSNPPYIADFEKVDLAKNVLDYEPHLALFAEDNGLAIYQKIAENAQSYLTDKGKIYLEIGHLQGQAVSQLFQHHFPDKRVSVLQDLAGKDRMITID
complement(1732743..1733810)       PHAGE_Aeropy_1_NC_028268: hypothetical protein; GU337_08720; phage(gi948298243)      4.73e-26            LactococcusraffinolactisMINWYAADGHLSEDMVADFRQTLLTWYDESGRTHLPWRIDKEPYHIWVSEIMLQQTQVETVIPYYERFLAELPRVQDLAEADEEVLLKLWSGLGYYSRIRNMQKAAQQVMADFDGQFPTTSQDLQTLAGIGPYTAAAIASISFNEVVPALDGNMFRVFARLLKIEADIAQPKSRKIFYDIILPIVDPERPGDFNQAVMDLGTSLMSVKTETLSDSPFARFNLSYQEGIELDFPVKSKKVKQVQKFYAAIISEKNGSLAYIQRPKTGLLANFWTYPLVEFDSWDAIYDGVSEHFEATKQLNITPVTHIFTHQKWQVMLVQVENEDASWTYLSDDAYEALPQTTLQLKLQAALKENL
complement(1733807..1734880)       PHAGE_Mycoba_Tonenili_NC_031080: baseplate wedge subunit; GU337_08725; phage(gi100201)     1.49e-06            LactococcusraffinolactisMFDQLQIMADRYEELGGLLSDPEVVNDTKRFMALSKEEASLRETVAAYARYVEVTTGISDAEEMLSDSSLDADEADMFKEELKALKAEKATLEEDIKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLAMYQKYSENQGWKFEILESNVTEIGGIKEVSVMISGNSVYSKLKYESGAHRVQRVPKTETQGRVHTSTATVLVMPEIEDFDIDIDPIDLRIDIYHASGAGGQNVNKVATAVRIVHEPTGIKVEMQEERNQQKNRDKAMKIINARVYDYFAQIEQDKNDEFRKSTVGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKLDEVVDALILFDQTQKLEALKQ
complement(1734950..1735462)       PHAGE_Plankt_PaV_LD_NC_016564: putative acetyltransferase; GU337_08730; phage(gi371496157)     6.29e-10            LactococcusraffinolactisMITETKRLYLREITQADYAVIAKILQDDDAMFAYNGAFSDEEVAQWFDNLMTQYQTRGFSLWAVVLKETDQVVGQCGLTLQQVQGETVTEIGYLFNRDYWHQGYAIEAAQACKTYAFDILGIERVFSIIRDNNLASMNVAIRNGMTVRTKFIKTYKGIEMPHFTFAVDKS
complement(1735491..1736060)       PHAGE_Citrob_Moon_NC_027331: thymidine kinase; GU337_08735; phage(gi849248619)       1.59e-60            LactococcusraffinolactisMAKLYFKYGTMNSGKSIEILKVAHNYEEQGKPVVIMTSALDNRDEIGVVSSRIGMREQAVPIDAALNVFDYVAKLPEKPYCILIDEAQFLSKKNIYDFARVVDELNVPVMAFGLKNDFQNELFEGSKYLLLLADKIEEIKTICWFCSKKATMVLRTENNQPVYEGSQIQIGGNESYLPVCRKHWFKPEL
complement(1736204..1737382)       PHAGE_Lactoc_bIL312_NC_002671: integrase; GU337_08740; phage(gi13095892)             1.92e-49            LactococcusraffinolactisMRDIKVGSIWVEKSKTVGKYVWRMRYENPVTCKAEKTSITLTSKSKQAGNQALNLMLDKIKKKIEKQSATLDIASEFILFSDIIDIWLEDQVRKIKHSTYATRTRYCNILKKDFKGKAIGDFSPLMIQRYFNKMPYTRKTLVTYFGIFRQIMNFAFRLDFVKVDLMKKVELSVPPITLEDMEKERKKLFSYDELKQIFILMTRPDCRRNALILEFLFLTGLRYGELASLKWEDYDKQAAYIDINSTLDYSVGGVTKKCHTTPKTIASNRKVYLSNRSIEILTYFKSDNTRLLQNGRSFKDYGYIFPSRTGNPVSWRDLGRSFANFGKRAGFDRKFSPHALRHSHITHLVESGADQVAIMERVGHSDPTITTKIYTHTTDEMRSRLVDLIDEN
complement(1737484..1737672)       hypothetical protein; GU337_08745                                                    N/A                 LactococcusraffinolactisMQQNQKYIADFYSLSEKTVSNQISLMRKEQEYIKGNCFRLSGRVWVPAFDKFLNKQKDSCYK
1737728..1738414                   PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; GU337_08750; phage(gi985761246)     3.29e-89            LactococcusraffinolactisMTMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIYADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSVCTEIKVLLGIPA
1750628..1750639                   attR                                                                                 N/A                 AAAATAGTAAGT

#### region 7 ####
2029240..2029316                   attL                                                                                 N/A                 AGACTATGCTTAGTTTTCTGTGTTTTTTTCTAATTTCATTTAGAGGTGAATTAATTGGTAGTTATTAGAGGTGCCCT
complement(2031675..2032655)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; GU337_10145; phage(gi158079504)     1.04e-120           LactococcusraffinolactisMLNKTMNWQLIEDELDEYVWDKATAQFWLDTRVPVSNDLLDWRKLSDMEKEVVKKAVGGLALLDTLQSEEGLYALKKNARTLKERAVLSNFTFMESIHAKTYGTILISLNTFKDIEEIYTWMNNDRRMQFKAKKINEFYQNGTPMQVKVASVFLEGILYYSNFFIPLWYRGQNKLANLAELIKLVIRDESVHGTYLGYKFRQDFNELSITEQENFTNWMYSFLEELLDNEFAYTEEVYSEIGLVEDIKTFVKYNANKSLQNMGFDIYFKDASANDVNPIVMNGISIETANHDFFSQVGAGYLMGEAEEMLDDDYIFLKEQQKRELH
complement(2032739..2033230)       thiol peroxidase; GU337_10150                                                        N/A                 LactococcusraffinolactisMTTFFGKTVTVSAERQLHVGDTMSNFTLMSSDLTLKSLSDFEGKKKVIIVPSMETDLCSTQTRTFNKELSELEDTVVITVSVDLPFSQARWCGAEGLDVVLLSDYYDNSFGKAFGVLMEEWYLLARAVLVLDSQNTVQYTEYLENINESPNYEKPIGVVKSL
complement(2033592..2034545)       PHAGE_Mycoba_Bongo_NC_041970: baseplate wedge subunit; GU337_10155; phage(gi100108)     2.77e-26            LactococcusraffinolactisMSKNYLYYRAINWNIVEDEFDNAVWERATSLFWLDTRIPIENDFTNWIKLNLEEQGQLKCLLILLTNLSTNQSIEVGEIVRNGKCSQQEVAILNNIQFIEMVNTKAYNRILLTFDKEINLEKSFEWVDNDSRVLEYLNDINTVYRESSLIKKRFIALCVEGLLNYAYLSHLFELWINKEFNNLGTMLEMIIRNESLHCFYFSHKIKLLLKESDPKEVERFKAWSYETVNHFVKLGLNIIGDFYYLKESKKIAKNLILQEANNILMGIGLKEQFSFNDEVLKGINYRLNNLRRHYLSISSNKSTSTNEEIMEESDYEF
complement(2034555..2036711)       PHAGE_Entero_phiEF24C_NC_009904: putative ribonucleotide reductase; GU337_10160; phage(gi158079505)     0.0                 LactococcusraffinolactisMTKDYFILNNMLNVLVEGQIPLHYDREALEEYLNTEIRDNLKTFDSIDEKLDYLISHDYIDESVLSIYGENNREFVKKLFIFAYNYGFKFKSFMAAYKFYNQYAMKTNDLNYYLENFEDRSVFNALYLANGDRNLAHKILEELISQRYQPATPTFLNAGKKRRGEMVSCFLIDINDSMLSIGRNINSALQLSRIGGGVGVNLSNLRATGSPIKEIENASSGVLPVMKLLEDSFSYSNQLGQRNGAGVVYLNVFHQDILEFLSTKKENADEKIRVKTLSLGLVVPDKYYELLKTNEPMCLFNPYHVERVYGIPFSYVDLTKEYDTMVANGEIEKTVINARELEQEISRLQQESGYPYILNIDTANRTNPVKGKIIMSNLCSEILQPQEPSILNPDLSYKKVGTDISCNLGSMNMVNLMEAKDFGKSIEYAIRALTTVTDRGAISEVPTVANGNSLYHTIGLGAMGLHTVLALNGIDYESDEALEFVDAFFLAMNYYSLKASHQIAIEKNETFHNFEYSRYADGSYFDYYLAKEFHFTSEKVAKIFENILLPTIEDWQLLKENVMKDGLYHRNRLAIAPNGSISYINETSASLHPITQLIENRQEKKVGSIFYPAPYLSNKTLRYYKTAYNMDQRKIIDIYAKAQQHIDQGMSLTLFMRSVLPEGIYEWKKQGSLKLTTRDLNRLRNYAWTKGIKSLYYVRTYTEDDEFNSVNNCESCMI
complement(2036746..2037513)       PHAGE_Staphy_6ec_NC_024355: hypothetical protein; GU337_10165; phage(gi658310423)     4.91e-08            LactococcusraffinolactisMQVIRIYYISLSGNTTNFLERLDHYLQKELQEKLDYVNVKDLEKNNESLGFEIKEPYFAFLPSYLEGGNGVTTGNTEILTTPLRRLIAYKKNSKYCMGIIGSGNRNFNKQFCLTAHQYSEEFGFPVLDEFELRGTEEDVIRISNRLNTRLIEWRYSSELVPYRHLPNMTPPHMPHTLRHSHHIKDGTWQKMTIWSGKIKIFELRENGDVLRECTYDTSNQPPFIEPQTWYKLSPLTEDLVFSIDLFCKKSDFLHQ
2037671..2038342                   cyclic nucleotide-binding domain-containing protein; GU337_10170                     N/A                 LactococcusraffinolactisMTKIGCVHRVPLFNNLACDERSEVQELLYHKTFQKGEIIFSPDDPKRLSIVSAGAMKIYKLSKTGKEQLIRIVNEGEYDGENYLFGLSNDSLYGEAIKETKVCILYKSDFNKLINLYPQLSCKLLQLNAYKSLEVEKQLQLLAIDSIEDRLATYFSQLSLLSEVMTEETITIPVSLKELASYLATSPETISRKLRAFQEGGLINRKGKKIILFRSFWNKFDFL
complement(2038413..2039099)       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; GU337_10175; phage(gi985761246)     1.63e-88            LactococcusraffinolactisMTMNHFKGKQFQQDVIIVAAGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNKKSFYSWKMDETYIKIKGKWHYLYRAIYADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPKVVVTDKAPSITSAFKKLKEYGFYQGTEHRTIKYLNNLIEQDHRPVKRRNKFYRSLRTASTTIKGMEAIRGLYKKTRKEGTLFGFSICTEIKVLLGIPA
2039150..2039168                   attL                                                                                 N/A                 AAACTTTGCAACAGAACCT
complement(2039170..2039268)       hypothetical protein; GU337_10180                                                    N/A                 LactococcusraffinolactisHYSPATVSNITKVTQESVSPFHERSLQTNYSVL
complement(2039404..2040309)       PHAGE_Mycoba_Wile_NC_023709: gp58; GU337_10185; phage(gi593776290)                   1.70e-08            LactococcusraffinolactisMKKIFNVFLTLLCLFVIFNMISFFKALNKSEKKLTHLDHREVKLSYGKVTYLDHGNSENILLSVHGLYGGYDQAFNNLKDFSDTYRIIAPSRFGYLGSDIKGNGSPEEQVSSFIELLNHLNIDKVFVVGTSAGGTVAIKFALDYPERCRGLILYSSASPWDKKPNHVPKRLGPPEFLNNNIAMWLISPFFDQTMGMKPSTIYQMFPIDKRAKGVNIDSDITNRDMAVNFNDYRIEDLKVPTLIIHSEDDKVAPYSAPQGHVKQSLYRYPRLTKKIFKNGGHLMEGHGAEIKKTVKKFVEEN
complement(2040752..2041276)       hypothetical protein; GU337_10190                                                    N/A                 LactococcusraffinolactisMNYNEIFQDVIATLISGGIAFIISTILYPKVAENWEKRRQDEKEQQEMDSVSSNQEGDVIKTVVSKDYGPEGIWSSRTFYTIKEDALDSFSKIIFNVRENKNLTVELQTEDIKKSINKEIEADGKGLLRVFINGKKESKDLYITRFGKKRLEKPLKLTRLPYSDEDSYMYEIQK
2041415..2042095                   PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; GU337_10195; phage(gi985761246)     2.09e-89            LactococcusraffinolactisMNHFKGKQFKKDVIIVAVGYYLRYNLSYREVQELLYDRGINVCHTTIYRWVQEYSKVLYYLWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLHKQFGEPKSIVTDKAPSLGSAFRKLQSVGLYTKTEHRTVKYLNNLIEQDHRPIKRRNKFYQSLRTASSTIKGMETIRGIYKKNRRNGTLFGFSVSTEIKVLMGIPA
2042274..2042837                   peroxiredoxin; GU337_10200                                                           N/A                 LactococcusraffinolactisMSLIGKTIENFVTDAYQEGKFLTVNSEDFKGKWQVIVFYPADFSFVCPTELEDLQEQYDVLQSLGVDVYSCSTDTHFVHAAWHEHSEAIGKVTYPMLADPSQKISRIFDVLDEASGLSQRGSFIIDPDGVVQAVEITADGIGRDASQLVDKVRAAQYVRKNPGEVCPAKWKEDAETLTPGLDLVGKI
2042897..2044426                   PHAGE_Bacill_G_NC_023719: gp344; GU337_10205; phage(gi593777800)                     8.20e-34            LactococcusraffinolactisMLEENLKGQLKQYLDLLENDLVLRLNADTSDANGKKVHDFVTEIADMSPRITIEPSSDIKAPGFSVDQKGSISGVAFAGVPLGHEFNSLVLALLQVSGREPKIEAELKERIQSITKPYHFETYVSLTCHNCPDVVQALNIMSVLNDNISHTMIEGGMFQDEINARGVMAVPTVFVNDEEFSSGRMSPEEILNKLIGQVGSESFEDKDPYDVLVVGGGPAGASAAIYAARKGIRTGIVAEKFGGQPLETLGIENFIGTPYTEGPKLAAQLEEHVKTYPVDVMKTQKAVKLAKNELVEVTLENGAVLQSKTVVLSTGARWRSLGIPGEEEFKNKGIAYCPHCDGPLFAGKKIAVVGGGNSGIEAAIDLAGVVEHVTVLEFLPELKADKVLQDKLYSLDNVTVLTNVETKAIHGQDKVESVDYVNRETQEAVTLELAGVFILIGLVPNTEWLDGVLERTARGEIIVDKQGATNLPGVFAAGDCTDSAYKQIIIAMGSGATASLGAFDYMIRN
2044688..2044708                   attL                                                                                 N/A                 CGGTTCTGTTGCAAAGTTTTC
2044762..2045442                   PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; GU337_10210; phage(gi985761246)     4.72e-89            LactococcusraffinolactisMNHFKGKQFKKDVIIVAVGYYLRYNLSYREVQELLYDRGINVCHTTIYRWVQEYSKVLYYLWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLHKQFGEPKSIVTDKAPSLGSAFRKLQSVGLYTKTEHRTVKYLNNLIEQDHRPIKRRNKFYQSLRTASSTIKGMETLRGIYKKNRRNGTLFGFSVSTEIKVLMGIPA
complement(2045439..2045915)       hypothetical protein; GU337_10215                                                    N/A                 LactococcusraffinolactisKDTSVTIVLITPEAVSYRKNWIGHYDDWLYDELRYSLEDRNNNRTNGVVAVYTDDAKDMILESSSHYCAHCQETKSCRTLKCFDNLARKNMLNIKQSYKKNPCNDLYDDSHDSYISLVSLEEFKQDYTKYIDNAKDKRDRVLLRSLKIKRALSELQIS
2046067..2046489                   PHAGE_Bacill_WBeta_NC_007734: putative mannose 6-phosphate isomerase; GU337_10220; phage(gi85701420)     1.77e-49            LactococcusraffinolactisMTFDYKDHGKEKFIVNIEDYTKENENYRTTIWTGEKLQVTLMAIEPGDDIGLEVHMGIDQFLRIEEGKGLCQMGDAEDNLTFEQEVSDDDVILVPADTWHNVTNIGDKPLKIYSIYAGPDHVPGTVHKTHEEAKNDPNED
2046515..2046528                   attL                                                                                 N/A                 AAGGGCACCTCTAA
complement(2046652..2047029)       transposase; GU337_10225                                                             N/A                 LactococcusraffinolactisQNYQTTPANVHDSQVIGVLVDPDEITLADSAYQNQATPKGAELFTCLKNTRSKSLKADDKMFNKIISKIRVRIEHVFGFVENSMHGSSLRSIGFDRAVLNTDLTNLTYNLLRYEQVKRLNLKTWR
2047102..2047782                   PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; GU337_10230; phage(gi985761246)     2.09e-89            LactococcusraffinolactisMNHFKGKQFKKDVIIVAVGYYLRYNLSYREVQELLYDRGINVCHTTIYRWVQEYSKVLYYLWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLHKQFGEPKSIVTDKAPSLGSAFRKLQSVGLYTKTEHRTVKYLNNLIEQDHRPIKRRNKFYQSLRTASSTIKGMETIRGIYKKNRRNGTLFGFSVSTEIKVLMGIPA
2047791..2047805                   attL                                                                                 N/A                 GAGTTCAGAGAGGGC
complement(2047795..2048061)       PHAGE_Lactob_J_1_NC_022756: transcriptional regulator; GU337_10235; phage(gi557307951)     1.87e-06            LactococcusraffinolactisMIMMVVCVCVIDDIANQRVYIKKIHIEDTHVRLESLNKDTYDNGELIYPDILLENTENLRLIGKVIDSFKPIEIKGSVAKFENQTSPL
complement(2048027..2048461)       PHAGE_Strept_315.2_NC_004585: putative repressor protein; GU337_10240; phage(gi28876261)     1.71e-13            LactococcusraffinolactisMNVVRKNGKVFDVSVSYLIGETNIKHIDKINQKIESLSENRQQKVFDYIDKQYYEQEIESNVVHLRNDLIPYQVISEQSLSAGYGNGYTDEQETYTVYWDKDVRYDYAAEIEGNSMEPKFHSGDIALIRKTHVNDYDGCVCVCD
2048731..2049444                   PHAGE_Strept_phiNJ2_NC_019418: peptidase S24-like protein; GU337_10245; phage(gi414090256)     1.38e-76            LactococcusraffinolactisMETKIAFPQMLNKYRLLKNLTMEQLAEEVGKTKSTISKWEAGTRSPKIYEIEEIAKYFGVEPQTMMFGDTSKIQLIYDRLEPTRQENVISYAEKQLNEQENNIVSIFDDRKRVTAYVEGVVAAGLGSYQEENLHMEVNLLEEEIPDKYDTIAQVVGDSMEPLIKNNDLLFVEATSQVDTNSIGIFQVNGKNFVKKLKRDYDGDWYLQSLNGNYEEIYLSEDDDIRTIGEVISVYREI
2049459..2050028                   PHAGE_Lactob_phiadh_NC_000896: hypothetical protein; GU337_10250; phage(gi9633003)     7.93e-09            LactococcusraffinolactisMGLFDSKEVKEAKRQYKEEMRQLANSMQPTGKIFMCAKWDDNFRDVQVFEEVKAVTQTQGKEKKKGGITRALVGGVVAGPVGAIVGGMTAKTENNATSITSQQVTRTLVVTRDDPFNTVLSLPYNAKLEVKLRDILAANTTPAVETTTVEQIESQPVSIADEIVKLKELLDAGILTDEEFATQKAKLLK
2050193..2050772                   PHAGE_Strept_phiNJ2_NC_019418: putative recombinase; GU337_10255; phage(gi414090258)     4.45e-42            LactococcusraffinolactisMNKVDIYVRASTKGQAEEGYSIDEQIAMLTSYCSIHKWKVYEIYTDAGFSGATIDRPALSKLSKDAQKKRFNTVLVYDLKRLGRSQHNNIAFIEDVLEKNDIGFISLTENFDTSRKSHGGYLIRLWSTRQRHHGKNDDGQIRACKVWTNDDKYNCLWLYLRQNNQPKHQSSRGYCSQDHFQVFGWVTNT
2061642..2061656                   attR                                                                                 N/A                 GAGTTCAGAGAGGGC
2063435..2063448                   attR                                                                                 N/A                 AAGGGCACCTCTAA
2064646..2064666                   attR                                                                                 N/A                 CGGTTCTGTTGCAAAGTTTTC
2065437..2065455                   attR                                                                                 N/A                 AAACTTTGCAACAGAACCT
2065514..2065590                   attR                                                                                 N/A                 AGACTATGCTTAGTTTTCTGTGTTTTTTTCTAATTTCATTTAGAGGTGAATTAATTGGTAGTTATTAGAGGTGCCCT
