gi|00000000|ref|CP050930.1|  Neisseria gonorrhoeae strain NG211 chromosome, complete genome. 2218825, gc%: 52.43%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
455723..455786                     attL                                                                                 N/A                 GCCGTTTCCGCCGCAAAGCAAAACCGCCCTGATTCAGGGCGGTTCTTTTTTGTTCAGGTTGTGT
455926..457122                     PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; GHB95_02375; phage(gi16130540)     9.15e-60            NeisseriagonorrhoeaeMAKIITPLSANQVKNAKPRDKLYKLSDGGGLALWVYPTGRRSWKLSFMQDGRQQTISLGRYPDFSLAEAREWREEVRRKRAHGENVVNKKVRADFAFEKVARDWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTADVVGCLRVMEARGIVDTLRKTKNSLKMVFAFAVGSGMMDINPVAQIGSGVFERVKTKNMTALSPSELPRLIDFLEQRNEFAVYAGRVHIHPVTRFCIYWLLLTMTRIREAALMEWSELDGEVWRIPAERKKERRGHDVPLSRAMRWVLDQARGLNVNGRFVFESVNFQGHINKESPRVAMRRSGLDTTAHGLRSLARTYLREVLKVYNDVAEKLLAHSLGTRTQTAYNRSELWEERKDAPERWGNDVLRLADNGK
complement(457478..457747)         hypothetical protein; GHB95_02380                                                    N/A                 NeisseriagonorrhoeaeMESSDVQGRMETLAFATAPKKGGIRKSGFGRVILIKSGHIVIHNADGDSFATGYGVIAADIVSPDLKTDFDIFFPPESLLRYKKIGKKK
complement(457942..458625)         PHAGE_Aeromo_phiA8_29_NC_048660: hypothetical protein; GHB95_02385; phage(gi100040)     8.78e-28            NeisseriagonorrhoeaeMDKEKVLDKIKKCLALGRSANEHEAAQALRQAQALMEKYKVNAEDIALSKVSEQKADRKMAFKLAGWQWGVANMIADIFGCKSYQRGKTMMFYGIGNRAETSAYAFDVVYRQISADRRKFLKTCRAGKPSHRTYLADRFCGGWIASAWETVKKFEMSDEEKAIMDGYKKKEYPDMAEARTRDAKSSILQGSKMEYEALTRGMESGKQVKLHYAVNGTGFVKQIGGQT
complement(458636..459172)         PHAGE_Mannhe_vB_MhS_587AP2_NC_028743: hypothetical protein; GHB95_02390; phage(gi970580043)     6.01e-13            NeisseriagonorrhoeaeMQTVATKPTAKQMLAAKRAAKESTRQERAVKRAGTVKNVDRNRLSARSKAQKENIARMLSGAKVSEDEALTCGIMMRLVAAKVRRYCGEHPGVFDGAAGSRQLERYIKPSEFHAVEIQPEACKALLQNYPAAAGNLGRRKQKKPRVRKRISPSRMARPNRKQSERRIGKGAKLKYRTN
complement(459283..459498)         hypothetical protein; GHB95_02395                                                    N/A                 NeisseriagonorrhoeaeMSYLEDVKNALRVIDNLCKEALKEPESLEGYIDEIRDKADEADTSLEFLKDVINYGISDLKNVIEVFEDCV
complement(459550..460041)         PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; GHB95_02400; phage(gi374531698)     3.65e-19            NeisseriagonorrhoeaeMTALTLYRCAADVQAALDYYFDSETEREDTLEAVIGQFEVKAQSVIAYIKNQEITEKMLEEHIGRMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGTFKASFRKSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNLQIR
complement(460038..460220)         hypothetical protein; GHB95_02405                                                    N/A                 NeisseriagonorrhoeaeMANIDLTQWDGKTIGAAANPEQGYINITIGSDDLFINIEQAYAIHAALGEAVAEYEGGAQ
complement(460360..461046)         PHAGE_Pseudo_HP1_NC_048630: hypothetical protein; GHB95_02410; phage(gi100002)       5.09e-10            NeisseriagonorrhoeaeMSLILSVKDESNFKPCPAGSHHATCIRIIDLGTQLVEYQNEQKRQHKILVQWEIDPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDFTPEERDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKHPDNAVFAFDLSDPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGRTEYPQGNAAPAEDIEDDIPFN
complement(461115..461276)         hypothetical protein; GHB95_02415                                                    N/A                 NeisseriagonorrhoeaeMSFHPETAYNGGGETEPYGPSPEEIKYRQSPETAETRRMTEKQAEGHIKSIIR
complement(461273..461548)         hypothetical protein; GHB95_02420                                                    N/A                 NeisseriagonorrhoeaeMKTRNIAFKFAVLAAVLAAGYAFGFAKGGGSRTAKGKPAGIAAMRMALAQKQAQVAELSAEIWLEERHLNAEEEAGCRRVHGDAEVPEGKE
complement(461701..462033)         hypothetical protein; GHB95_02425                                                    N/A                 NeisseriagonorrhoeaeMKYYGTAAYGSPDWGMERYYAREDMRQALDGWEAENRILHESGLIEIAKKSAREFVRDADGEPYSQEDWETYLTEDASRIGKDTEAAMNYAIDEREWFALAENIGRLANS
complement(462174..462461)         hypothetical protein; GHB95_02430                                                    N/A                 NeisseriagonorrhoeaeMSYLDQPLKHGYGNGNGSGNGSGYGNGYGNGYGNGYGNGYGGVGGGGSGSGYGNGKGYSNGSGNGDGDGNGNGSGNGSGYGNGYGNGYSNGSGNG
complement(462458..462934)         PHAGE_Iodoba_phiPLPE_NC_011142: hypothetical protein; GHB95_02435; phage(gi197085698)     1.68e-32            NeisseriagonorrhoeaeMEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQHEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWWAKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVAQS
complement(462967..463167)         hypothetical protein; GHB95_02440                                                    N/A                 NeisseriagonorrhoeaeMNELISRINRFGARAKDEQSLLLKVGEICRDAAATWTTRKSESINHTAFTFTVKKDGLKEKVMIVL
complement(463365..463778)         hypothetical protein; GHB95_02445                                                    N/A                 NeisseriagonorrhoeaeMIHLNVHYCDEIIRHAENDKYSLIGIFPDICHIPTPQAILGRLCLSVSFSAEGMDIQTMKTGQIFLEIVRNDDVISALEIPSYDGSDTEENVSFMLHQTISGLPVSDNDRIYVRMTTHNHILSESRPLSFSWLPYHS
complement(463775..464236)         PHAGE_Brevib_Jimmer2_NC_041976: hypothetical protein; GHB95_02450; phage(gi100059)     3.10e-05            NeisseriagonorrhoeaeMGATLTVAVAACTVSTPTSAIPVTHIKCLRINGQIKCVKPISPNTTPAAEHIEHVRKNPRRKAAMDRAAARIADKIALKAGGETFVSLRMKKGFTQSELATAAGLPQPYLSRIENSKQSLQDKTVQKLANALGVSPLEVRAAFERRYEYMEQA
complement(464253..464690)         hypothetical protein; GHB95_02455                                                    N/A                 NeisseriagonorrhoeaeMELTVHFNAEQDLDRLFEKDEEAVGYLENVIAMIQADSAIFDGLYKNRYFREYGEPIGPIDLEVKPILSLWGKDIKVLRVRFDSEEAAGYRIIYAPCHEKQPNGTYIRRIDILAVVNKKTDEFDYQAEHPITKRIIKDYEELYSN
complement(464803..465519)         PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; GHB95_02460; phage(gi100039)      2.06e-21            NeisseriagonorrhoeaeMPFIIDYQCLCAINSEIKMFSGEQLGQAISEAIKRKNVSQKEVADHFGVKQPSVSGWIKNGRIDKKHLDKLIDYFSDVVTPSHFGIETFRVLKSNEQSSIRFPRLNAEATCGAGTINDHYIEVVDYVTVAAAWAREKLGGNLNKIQVITARGDSMEPTIENGDVMFVDTAVEAFDGDGLYLLWYIDGLKAKRLQSTVGGGLMIISDNSSYRTETVRGEDLNAVRIIGRIRGAWRLSQF
465594..465824                     PHAGE_Aggreg_S1249_NC_013597: recombination protein; GHB95_02465; phage(gi100049)     6.21e-10            NeisseriagonorrhoeaeMSIQKAVDYFGNESRLARAIGVKQPTVWAWNKKGTPPPIIRCVQIEKLTGGAVNRKDLRPDDWHLIWPELAGDQPK
465904..466059                     hypothetical protein; GHB95_02470                                                    N/A                 NeisseriagonorrhoeaeMKKQDRNRLSKKDRRLIKKAMLKAAAKGCDEVYKIAPGLKDGFELLGKQPD
complement(466036..466224)         hypothetical protein; GHB95_02475                                                    N/A                 NeisseriagonorrhoeaeMPSDLSFILAKELIRSGSIRLKGSTAKGQAGELAVFIRTLHQKPEESEPNTDNEYLIGLLSK
466397..466624                     hypothetical protein; GHB95_02480                                                    N/A                 NeisseriagonorrhoeaeMNQKQTQCKQIVDYIRNKGCITSLEAYQNLKVTQLAARITDLEGRGFVFAKPRMKAGGRGKPVTHYSIVKNGAEV
466621..467631                     PHAGE_Aggreg_S1249_NC_013597: HNH endonuclease; GHB95_02485; phage(gi100046)         7.32e-17            NeisseriagonorrhoeaeMSARLMGMAFKTGIPRGQRFVLVKLCDCANDEGLCYPSQETLAEDTGFAETAVRQHIKWLKDNNFIKSARRQRGRERKSDIYRINVALLEKCYAEAAKRKAARQAKMWEEPLDYEPSDFEPSDYEPSDFEPSDYEPSDFDAKNHQILSGEPSDFALRTVRFCAKNHQILSDEPSDFDGSLYVEPSVEPSVEPSGSNARGARAPAGPHPAKPQTAPPETAPAAKAKKTGRHETELSLLADYGITGQAAEDFLTVRKAKRQPLTETAMRLIAADAEKCGMTALQAAEYAIASGWGSFRADWLQNKTFGRSGNRGGPTHNQTAAVPDAGSYGDMPTTDF
467645..468427                     PHAGE_Vibrio_X29_NC_024369: IstB-like ATP binding protein; GHB95_02490; phage(gi658311189)     8.42e-44            NeisseriagonorrhoeaeMALRNASDFLGAYGGGVRVERRQCAEHGGYAAKSVLRGVWTGCPACRKLEAADEMAAYAETLRRGAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMARAKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGDMLRTVKDSFGGGGGEAGAVGIFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLMPMLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWESYRA
468420..468703                     hypothetical protein; GHB95_02495                                                    N/A                 NeisseriagonorrhoeaeVRETCFYCNHADFKTNTGTPVRGFAKCAKARNAEERAKHYPRTNPCAAGAFQTASGAAVAKRTAVLGEYPPAMRRIAGRRVKRFGNIPAYPIFAA
468741..469235                     PHAGE_Mycoba_Gengar_NC_031035: putative transcriptional regulator; GHB95_02500; phage(gi100045)     3.64e-08            NeisseriagonorrhoeaeMTVQNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRADAPKFKKLKCRRYEKMYAGLKDCGFDGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETAGGGI
469412..469561                     hypothetical protein; GHB95_02505                                                    N/A                 NeisseriagonorrhoeaeMDTLLSIITALSFAGAATLAVWLLVEASDAVLRRKRDGKGEDDFDGFGY
469697..470299                     PHAGE_Entero_cdtI_NC_009514: holliday junction resolvase; GHB95_02510; phage(gi148609431)     4.98e-08            NeisseriagonorrhoeaeMQNLPQQGSPAKARGKTRGGGSRRDDGGKAARIHPRRARRLPDIGRRPVDATGRGMRVIRLILPYPVSANRYWRIWRNRAVRSAEAAAYRETVRRIAQGAGAMPSEGAVAVYVRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADYADEPVAGGGLAVEVGELEMEQTDAADEGWDFIGQEGWDV
470292..470597                     PHAGE_Escher_ECP1_NC_049926: hypothetical protein; GHB95_02515; phage(gi100011)      8.15e-09            NeisseriagonorrhoeaeMSSAIRKAAKGGQCTPNIAGVCNDNPETVVLCRFPGETHGAGLKSGGLGAGFGCGCRRGAIDGRGAGLSREDKEFYMRRSQLRTIRRLEALGVVGVKGRLK
470594..470977                     PHAGE_Pseudo_JBD44_NC_030929: hypothetical protein; GHB95_02520; phage(gi100006)     1.44e-24            NeisseriagonorrhoeaeMNGAEFTLTPQNKKQVMRSIWDSPDGWFENGNLEITIRPRKSKRSIEQNRRLWFLYREISEKVFIDGRRFSQDVWHEFLKRKFIGCIEMPNGQLMGISTTKLSVREMSEYQEKIISWASMEHGVLWD
470968..471486                     PHAGE_Salmon_UPF_BP1_NC_047875: hypothetical protein; GHB95_02525; phage(gi100004)     4.16e-31            NeisseriagonorrhoeaeMGLTQEVLKELLRYDDNTGKLYWAERPRKYFNSGLHYKSWNTGFSGKEVFLYKGRLGYLKLKIFKKQYNAHRLIWLFVYGKHASSIDHINRDKTDNRISNLRDVTHAENMKNRGKFKNNTSGHTGVYFHKPSKKWQARIMVNRKNKILGLFEHIEDAVKAREAASKDFGFVV
471551..471973                     PHAGE_Pseudo_H66_NC_042342: hypothetical protein; GHB95_02530; phage(gi100039)       1.86e-20            NeisseriagonorrhoeaeMSGLSDIDKVYQGVVDLHNAEQVVSREALAETTGLKMSEITKFTKLLVEHGKIYRVTRGIFKPAIGFGETRPVSVSVLDSGMGVLEIGDTVLHLNPQEMRSLGALMSGFGQQFSSIQMGREFSVLRNYLECSAKNGRLDF
471973..472212                     PHAGE_Escher_HK639_NC_016158: terminase small subunit; GHB95_02535; phage(gi356870601)     1.23e-06            NeisseriagonorrhoeaeMPRLSDEDWRKVELDYRRGVLSIAEIGRKYNVSAQHVGRVAKERVWTRDLNDEVQAKARAMVLSADKNGNAPDYADFNLK
472270..472512                     hypothetical protein; GHB95_02540                                                    N/A                 NeisseriagonorrhoeaeMAENLSKSAEQIVAELYGSPEDTFTKARMFQTVAAGFKVLVEIERKSYGMDTAESKISESAKTAGIRIEFVGPEDDGKDG
472493..473767                     PHAGE_Pseudo_H66_NC_042342: DNA adenine methyltransferase; GHB95_02545; phage(gi100041)     0.0                 NeisseriagonorrhoeaeMTGKTVDLKLPAKLDGLFKPCRYKVMYGGRGGGKSHGAASALLALGAQRPLRILCVREIQKSMRDTVHRLLKDKVAQLGLGHFYEITDFEIRGANGTLFVFSGLQSHTVDSIKSFEGIDIVWVEEGHGVSKKSWDVLTPTIRKEGSEIWITLNPDMETDETYRRFIAMPSEDTWLCEINWRDNPWFPEALNRERLKAQRSMNKEDYGNIWEGRPRMVSEGAVYRHEIQDAFHSGRVTLVPYDSSLPVHTVWDLGWNDAMTIGLVQRDLTSVRIIGYIEDTHRTLDWYVAELEKLPYRWGTDFLPHDGRTRNFQTGKSTMEILTGLGRKSVFVQNATGIEEGIRAARMLFPKVYFDKDKTARLLECLKRYGRQIHAKTGVAMGPLHDEYSHGADMFRYLAQAVDLMDTGSNTGYTETPVSDWRLY
473767..476019                     PHAGE_Pseudo_H66_NC_042342: hypothetical protein; GHB95_02550; phage(gi100042)       0.0                 NeisseriagonorrhoeaeMGTDVPETGVLPDKNGEPLTIGEYRLFVGEMMNQPAWRAVADKEMDYADGRQLDNELLQKQRELGLPPAVENLITPTLLSVQGYEATIRTDWRVTADGETGGRDVADALNFKLNRAERQSRADKACSDAFRGQIACGIGWVEVTRNPNPFEFPYECGVIHRNAIHWDMKSYKYDLSDARWLIRRRWLLPERLAQFFPEYAGHFKAMGRGGSDWRISGEMLDGGGNTGLADAWGISGRNTVSEEFWFNETTRELAVAEVWYRRWVTADCLRDKKTGRTVEFDGANPNHREMAANGAVLFAASVPRMRRAFVVGDLVVRDEPTPYPHQKFPYVPFFGFREDNTGIPYGYVRNMKYAQDNLNSTNSKLRWGLSAIRTVRTKGIVDMSDEQFRRNIARVDADIVLNKIEAAQPGARFDVSRDFELSAQHWQMLQDSRATIRQISGITPSFMGNRGNATSGRQESIQVEQSNQSLGLVMDNFRQSRSLVGELLLAMIIEDLGSDEQTVVIEGDAITQGRTVVINRPETDPVTGKAYLSNDLQNIRLKVALEDVPSTNSYRSQQLGAMSEAVKSLPPEYQVAVLPFMVSLMDIPFKDKVIEKIKEVRVQETPEQIEARIAQAVQDALAKSGNDIKRRELALKEQRTASEIKEIEARAVQIGVQAAYAAMQAGGQIAAMPQIAPVADAVMQGAGYVRPARGDDPGFPVPAMPPETQIPPEGIPEAYGADTGPMTAVPPKSANHAQTGMETPTVSDNL
476256..477452                     hypothetical protein; GHB95_02555                                                    N/A                 NeisseriagonorrhoeaeMGLFEPSAGDFWEMKEKEKKEKARKGAEERERAAAQAHRADAVRRTVANYEAGPARYRNVMDLSRNNIEDGARRLRRAGAFERGADAGLGFSGGDKALSPDARAGADFARRDTRPTDAGGRTPPPLGFDGNVYRDGKPVRDFDAQRPLVSAGPDALSPEERELYRRATTPYAGALNGQLTAAQLNAARGIVAEHNKNAAVRELGRERLAAAAAENAANREAVLQKGRFDAAVKANEGALNREMAQRNADRAFDVQQAELGMKRQGFEMKREADALELEDRKRIADLTRAYGFAKSDGQRGEIARQIDALNGKFERQGEKGFDPNVFKTISYEVADPDTGLTAKREGIVDLRTGKPLDVEFAGEREKRYAALGFKPNGQKTAGGKIIYENEKGEKRVEQ
477449..484762                     PHAGE_Pseudo_H66_NC_042342: hypothetical protein; GHB95_02560; phage(gi100060)       7.27e-40            NeisseriagonorrhoeaeMSDLVRYDPLEHGRLAGGLKEYRGFTQKDARAAADDTALTRGFKNSMRSARMGWNALTGDKEELGRLKAEDMDYRKIQEGRKSQARRELGEAWEKGGGVGGGLSNVWGELKKDWREKGLDGALEDVGEMAGAVLEQAPNALVPIATTTAGGILGALAGGNAAVGAYAGATLGNTLMEYGGQLDRAAEAAGVDPADKDAVMAFIGRGAPGALKNAAVKGAVVGAADMAAMKLGGSILNMGKKAAGKAALEKMGVAAADKAAVAAAKGTPEFAALAKESAKGGLGGAARHAAAYATESAGEFAGEYLGTGLANGEWDEKGAALEAFSSLGHSAVGFAGTKAYAAVTDPLRPPAGRKAGAEGGIGGNRKAGRPAPEGAQALRAAADGGAEQGGAGFDTAHHDQSHPALRQFADRTKQEEAGRFFSGPADGNTPRAEELARGTEKQPDVSGIPSEDGAEFLDTGVMPDGLARQYADMAAEYRAKPSEAMGINPDDGAVSAAAALAADSGAAVPSAVSDDMEARSVADDVPSGRSADADRGGVPSAYGNVRPGGAPRGAASVAPGGSAAAASGGIARVSPLPAGQYFDGLDTRGRKALAKEAGLDIKGVADFGQIAAPVRRKIEQAYHARIEADYQAASEAKQGYLPPPVRMADAVPVPKKGFSVPADALDKESRRRFDALPEWVRRHAQTVADYTADGIMRREAGMADMRGHYPEGLAESAGAVRAYRAQHPESADVLDRLNRAVYGYRRNNGWSVPLLSREGERLQGVRTALPDDGASEAVVGGGRGLTRALPTEDKGLAQDVRQDVRQGLTQGGRGLTPDAGADANAAALQGLPGFAVASGNAPARRQNLQVRARAEGAAPGLSASENLAGTDGGKRAPVAGKRPDTVLPVLNPQVAESAGRVSPKKRMADAAADFTRRLAADRRRPEKAGVPLGGGEYRFEHTDRRHIDALAGVPGRPGKGGMPEEFADMAGPSNSDGLVSDGRRYLKGREAETLRAGGLSEAVPSEPGRDYRPTQEARAPAKVMARPRDAASAGKPAGRAQPARAKDAPVAGKAAAAKNAATEKPSSDKVRNIEAGKSHFDGGKGKSAAAQGAATEKPSSDKAAEPETFAKTALDNPEEARRKARVLQGGPVYTVKGRQAPQGFKALREHAENIKKRLAESIGGLAERVDVAAVSETAPDKAQMLLSQRVEGWFDGRTGKITLVAENLTPERAVWAAWHELGHRGFAADGFAKYRAQLERADGNGLIRRIADAVQEGREGTGDAAASVRPAAVEEAVAELYAAQRTGGWAGIENRYGVKVGNGLKRGIAGVLARIGALLRRVLQRLAGKAGGAMSDADVFAMLADLHGNVEGARDAPWGGNHRAVMFARAEDGAAERSKSESLEKLRRAETIRISGREVPEGGNLREYKRNALEYGKSLRGPYVNKDTGREISLGRSGITEILRHDYKDAEHLQSIAAIPQIIENAVYIDTLPNEDLAKNGDIQGYEYYVSGLNVGGADYTVRAAVAVSRNGNRYYDHKLTKIEKGNLLSLLDRVSTTGASESKSPLSGIDDKRLLQILQDKDAGKGGIADFDTEAVRFSRAANIGAAISRITGKKSDLRNALKDRWDASKGIQLQFLGRRQIEDIYGGVLDGLKEYGRLSELFGADANKAVTEADKVVREWGRLKEEDAKALADLMHDATLAKVDADPLMRKDARGRLDGIRTALDIADGKIAKARAAVASAGARTARADAAYNKAQRAADKAAYALEKAQEKHGREILADEADMRLRRLFYADSEAKRALRRAGADAAAESRAKTDAVRMLEQARADVKRLEKDEVGAQKALEGLALLNRRFAGLPDAAQRVYRKARDDYRAHFGQVRDALAERLARAGQDAETVRRLKERFDNELGGVYFPLARFGDYLVVVKDADGNSANVSRAETLSEAEKLRDALKADFGPGFKVSPVMKSRDYIRSRDAVGSGFMRELGEAVGMLDLDPAQRARLNDTLTQLYLNSLPDTSWAKHGIHRKGVPGFSDDARRAYAQNMGSGANYLAKLRYADRMAEQLDVMQDFVDGRKYEEGFDQRQLQRVADEMRKRHEAVMNPNPSKLAQALTGFGFLWMMGMSPASAVVNLSQTAMVAYPVMAAKWGYAGAARELLRASKQIGLRFGEKFNTIEDSLNGDEKAAFRKAADYGVIDLSQAHDLAGVANGDPGLAGSAWQKVMDKAAWLFHHAEKFNRQVTFVAAYRLAKRAGADSDAAFEQAKKATYDGHFDYAAQNRPRFMMGNAAKVVFLFKQYSQNILYALGRNAYLAFKGDKEARKTLAGLLVSHAMASGILGLPFVSTLLAVASMLGSDDDDPWDAEAALRNMLADTFGDKAGEVLAKGFSRLTPLDVSGRLGLDQLVFPDIQDGLEGKKWAESLVVGSTGAVVGAGIGAADGVRTRSSVPRTANTLSLMKSW
484855..485367                     PHAGE_Pseudo_H66_NC_042342: DNA helicase; GHB95_02565; phage(gi100044)               1.23e-19            NeisseriagonorrhoeaeMETADGSDNSLFGDFSDEDVKKGVEKLIQEKLAGYEADMKRQEAAKAHYREIYTAHPDADSIVESRELEEWLDAQNPLVRKAFNDALKDGTAAEVIGAFDMFKAAKSAAEPEKPAEKPPAGKNTPNTLSDIPAGRDHTASDGPPDYLSGNALAEKLASMTEEQVEKFLNS
485388..486680                     PHAGE_Pseudo_H66_NC_042342: putative transcriptional regulator; GHB95_02570; phage(gi100045)     1.05e-161           NeisseriagonorrhoeaeMAQKTNTAYGDPQAMMKQAAGLFAMHMQRNSTLNRLAGKMPAGTAGAEATLRKQTTQHMPVVRCQDLTRGMGDEIRFNLVNPVSALPIMGDNTAEGRGVGMSLSEAGLRVNQARFPVGGGTMTNQRSPADYRALIRPAAQSLMDRYADQTLLVHMAGARGFHDNIEWGVPLAGDPKFNDYAVNPVKAPSKNRHFTASGDAVTGVGDNGGELKIASTDLFTMDTVDSMRTVLDQIPLPPPIVKFEGDKAAGDSPLRVWLLSPAQYNRFAADPKFRQLQASAIARASQANQNPLFLGDAGLWNGFILVKMPRPIRFYAGDEMKYCADKFSEAESGLKIPASFADKFAVDRSVILGGQAVLEAFANTGKHGGMPFFWSEKELDHGNRVETLVGTIRGVAKTRFAVDVGGGAKEITDYGVTVVDTVVPLHGGIR
486735..487208                     PHAGE_Pseudo_H66_NC_042342: HNH endonuclease; GHB95_02575; phage(gi100046)           3.44e-30            NeisseriagonorrhoeaeMAEIYVKNNGGNRFGGVPYGNLAAEHYRIVAKQDGAILGADASEPPKAGDVLALGVLEQGFRLDDAQIIVKTAMSSGITADVGFAYADGADDAKVPQDAAYFASGADFASAGRIRCQSAKLVTLPKQALLTVTLKGAENKKAADIDILIYGEKFGQL
487214..487699                     PHAGE_Pseudo_H66_NC_042342: primase; GHB95_02580; phage(gi100047)                    2.08e-09            NeisseriagonorrhoeaeMKRRPGICLCGVAVFDNAVRTAAGGWMDKVFIKYIGGRAVWRDRIYHTGLVFEDGQVREVSAGAAAKLLRHGDVFAAVPGKRVEKADDTEALEKAGASELERETAAFDAVQDVILQINRMGKDELELYAKANYGQGLDKRKSAENLRGDVVRMVRQFGIAQ
487696..488370                     PHAGE_Pseudo_H66_NC_042342: exonuclease; GHB95_02585; phage(gi100048)                5.39e-55            NeisseriagonorrhoeaeMNLKALIARFRVLANDKAEPYFWSDEEVSGWLNDAVHEACLRGRLLHSDDAFVTDVEKGRPLYAYAAGGFAAGYAYEIDSIRFVSDGKPVCLKLVSPEAADVCAPGWRDGAQTGLPVYAVQGDGKLTLAPAPDRDGRLFAGGYCLPRDMAGDGDEPEINSIHHRNLVYWALAEAFSIPDAETFDPQRSESARRRFELYFGLPADSDLRRITREDAPHLNRHFWI
488373..488522                     hypothetical protein; GHB95_02590                                                    N/A                 NeisseriagonorrhoeaeMSAEEFCRKQIAYWLNESRKASDNADLKAFEFAGREPADYREMLKRYAA
complement(488559..489410)         PHAGE_Aggreg_S1249_NC_013597: putative phosphoesterase; GHB95_02595; phage(gi100037)     2.45e-45            NeisseriagonorrhoeaeMNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTVDLHCKSRGVTKRYTPTASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAIRKTGGCQVGPKTTADDRTGLRRAVAALAGRKGIDYSSAYSMVHQRFNVESIEDLPAGKLPEAVAYVHALTLHTGLTGEVLDREPLPAPQPALPISGNALADIAAMVYYGTRMIESGKDVSAPLKQLGCRQAVTMWTVWHETRSILKRSAAALEVLRGYADKDASDRIAACLEGIYSKATVR
490356..490419                     attR                                                                                 N/A                 GCCGTTTCCGCCGCAAAGCAAAACCGCCCTGATTCAGGGCGGTTCTTTTTTGTTCAGGTTGTGT

#### region 2 ####
575900..577314                     PHAGE_Clostr_phiCT19406A_NC_030950: capsid maturation protease; GHB95_03070; phage(gi100067)     1.68e-24            NeisseriagonorrhoeaeLLFEFKENKMIVVSRWPLLEKAFLRFGMPVAVVDLESTGGNLYEDRVTEVALVKFGQGRAERYEWLVNPQKPIPKFVAELTGISDGMVADAPVFAEIAGGLFSVLKGCVLVAHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRRLYPQFYKHSLDGIIERLGIVVEDRHRAMADVSALCDYLEYSLSAHGLEEWSRQCFRLTNPKLFPAALPERLRERLYGLPDGTGVLACFDGGGKVNYIGTFERAYGEVAALLDSGKAPVLVQYGGSPFFFPALGSLHAYKIKAELVGRYHSGCYVSAKNLLKTFTTVRFEKGSDGMLNAKTAALKNGVTDNPPTGLFANKKAARRALSSWAETYGLCPASAGILPDGYAEDEPCPVYVSGRCDKACGRSDEQVLAFAHKLPVLDWGKMHEVEITETDPLTGEKSFCMEWAAHWKWMTGFGISIKIYRMCLRRSLKRTGKILRKSVAA
577424..577612                     hypothetical protein; GHB95_03075                                                    N/A                 NeisseriagonorrhoeaeMPSEFFQTAFLPTRFACRVGLPVRPEASDKQGGFYSGLNLNRYGVASPCRTICTVCGFAALS
577619..577632                     attL                                                                                 N/A                 TTAATCCACTATAA
complement(577653..579419)         PHAGE_Burkho_phiE255_NC_009237: gp40; GHB95_03080; phage(gi134288809)                5.50e-167           NeisseriagonorrhoeaeMIERLKAVENQAEAMGRGARSAYLKQQAQELGISLATLYRKLEAVSVKPTRKRRSDAGKTELKPEEAKLISAVLAEAMRRNGKRLMPVRQAVEMLRANGKIEAARIDGETGEVIPLSENTITRALREYKLHSDQLLQPDPVSRMKSEHPNHCWQIDPSLCVLYCLPRQGKDTGLRVMKEEEFYKNKPKNVVKIENDRVWRYTGTDHASGTISVRYYFGGETSANLCDFFIYMMQAKKDIGKDPFRTVPRMVMLDPGSANTSAAFKNLCKPLDVHVQINKPGNPRAKGQVEKANDIVETAFESGLRFTEVHDIDQLNALSERWMRYYNGTQKHSRHGMTRYQAWNKIKPEQLILPPPAEYCRELAVSAPKEAKVSADLEIRFGGRVYSVKGIKGILVGKKVLVGKNPWEANGARVATYDAEGNEVWVSVPEVVFDEMGFKADAAVIGAEYKAPADTDAQRHRKELDKLAMGAETLEPAAAKRKGKAVPFGGKIDPYKHQEDTLAASNTLFMPKQGQQMDYNKMEVAEQVLSKVEIAKRLKPRVEADGGDWKQAVSVILKHYPEGVTEGRLEEAFERTRTRCRLKLLKTG
complement(579412..580293)         PHAGE_Burkho_phiE255_NC_009237: gp41; GHB95_03085; phage(gi134288829)                5.38e-07            NeisseriagonorrhoeaeMATEILGHTVGVTANELAIHSMEVMDKFSGGEAYNETVWIERGRFADAKRWKGCLSRDARSSSKSIRRMGGLPKSLKKSWPRTAGIPKTDECHPPFYRPENETSAAADDVGQIQTARAAGRRRRHFVGACRRRGQRQHFRCRPYDYGAARRPARKPNGGSERGDCRKKGRAGGKAVEKADGCQRATCGCGHRADDAAWQLDSLEVGIRSQISRLRDMFEQMAAHGEAHGFDHRAKMVGTLNQIILDCEQLRESYALPTEAPADNVPEWLGGETGEGDESGND
complement(580330..580614)         PHAGE_Burkho_phiE255_NC_009237: gp42; GHB95_03090; phage(gi134288815)                1.58e-05            NeisseriagonorrhoeaeMATSKKAQRLLRVFLAMDAHPVIGISNKELSDGLGLTPSQVSRDIDDLVASGLVIKLENGNYAYGIKTLQIAERFRKQQERLNARLQELENRIY
complement(580601..580831)         PHAGE_Pseudo_B3_NC_006548: hypothetical protein; GHB95_03095; phage(gi56692585)      1.63e-05            NeisseriagonorrhoeaeMEKPLNFKPIPYLQTRGSTAVWFKRNGVCKTHRAKHFNLERTAVEHPLRGKLKGNFGKSHEAAVKLGLKEDADGDE
581103..581483                     PHAGE_Pseudo_Dobby_NC_048109: hypothetical protein; GHB95_03100; phage(gi100035)     9.27e-14            NeisseriagonorrhoeaeMEKTSLFGKRLKEERIKLGLNQAEAAEKCGFSREMWGKWERGENRPSSEKLFSFSKIGIDIDYVMHGRRGETAAMPSESLSAEEKELLALFRQLGSGSRKELADYAAFKLVVEKKAQTALGKVSNG
581717..582757                     hypothetical protein; GHB95_03105                                                    N/A                 NeisseriagonorrhoeaeMKKIITHRIYPKNENRERVEPKISTHLIDLPITARRTLETRLTKALGNKSHGIEMSVVNTAENSFFQIAAAIQLKEEAEFIEDSAQFAHMLTDAQLNTNAPGGILLVLKGRVGDTGKPFLCVIKAEPQDGFRTKEEDDFITIEFLEELLLTDSARLFKIGFLVAETVRPLEQIQSGNYRAFLYDHLMTQTETRPAASYFYQVFLGMSIAASSRKLTQDFFEWTRNFIDNSDLSDDAKLDAHEALRVTLKSAEATISVNNFAQNHLPQEKRTTYTEFMVEKDFPQNAVSKDIEYIKTRLRKRRSYGFSNGVVILTPPEHTQDYMEIAPTEDGEYTVVLIKGQLQQQK
582862..583763                     hypothetical protein; GHB95_03110                                                    N/A                 NeisseriagonorrhoeaeISPVPVANFLKIEAKPGVKEISSALAKIGRKNYTSPQTQMTDLVGVRFVALLAEHIQIVCEIIESSSQWNAKVSKDFADEIQQNPKAILYNPNITRFVLNKHSLHPKMSASLLICAVKFRCVLYSNMLMQSWFMTIYTSLTAMFQSKQSAKSRRAWLWKLQMTYLVVLWQFKKQINHKKSFFPNYHSFIKRKGLFLKLIKKPIFFKHFNPAFPNQVFFLTSVHFMRRNILPSGKKMLKKCIFSVSQQLCWSIGLRKLVQMKYGKNGLCLHTTKTNSFVLIWISNHPMNSFAA
583883..584170                     hypothetical protein; GHB95_03115                                                    N/A                 NeisseriagonorrhoeaeMIEFVRAKKRLLWAFVLLLAWACGYRYAADKAEAEQTALIAAYRHSSMVAAEQYALQLKKAQDERQRWYDFSQKQSTDLAAALSELDKTRNTLQE
584244..584465                     hypothetical protein; GHB95_03120                                                    N/A                 NeisseriagonorrhoeaeMPSDTPIKTVAVAEIPPVPSGLLVEYERPERPAGGSPEQLLNHAVRYGGYYRKLEIQIEGWQNWHTKGRLKHD
584458..584667                     PHAGE_Mannhe_phiMHaA1_NC_008201: DksA-like zinc finger domain containing protein; GHB95_03125; phage(gi109289947)     3.82e-10            NeisseriagonorrhoeaeMTDFADRASEREAEFLVEALAKHQPPSENTAGFSHCEDCGDPIPEAKRKAVRGCTRCVVCHEYIQLKTK
586449..586462                     attR                                                                                 N/A                 TTAATCCACTATAA

#### region 3 ####
complement(887674..888732)         PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; GHB95_04705; phage(gi399528790)     1.44e-19            NeisseriagonorrhoeaeMSLRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICAASYEARQFGLHSAMSVATVKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLSLDEAYLDVTRNFKNIPYAGEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHKVMAFLETLPLGKIPGAGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGRYGYRLYDLARGTDEHPVKAERERLQISTEITLPEDLPLGQAAGHLPHLAEDLWRQITRKNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLMARVPPQTEDAFRLIGIGVGRLVPKNQQQDLWA
888831..889040                     hypothetical protein; GHB95_04710                                                    N/A                 NeisseriagonorrhoeaeMKLDKNNGFYQAERNSNGNYDIVRKNYLKNITKIQSNILIYLDNTSTGFKIQQRRKQIRAQISARQWRR
889632..890411                     ferredoxin--NADP reductase; GHB95_04715                                              N/A                 NeisseriagonorrhoeaeMAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSRLGFYEGKGFIWRAYSVVSAEYADTLEYFAVLIQDGPMSALFAKMQQGDTILLDKNATGFLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDRLAALSEHPLVGEYGHSFRFVPVTTRAANPSGLSGKRIPELLKNNSIEQALHTKLTPESTRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF
890468..890480                     attL                                                                                 N/A                 CGATATACAAAAA
890620..891896                     PROPHAGE_Escher_CFT073: prophage P4 integrase; GHB95_04720; phage(gi26249391)        4.71e-47            NeisseriagonorrhoeaeMAAHNKLTQKQIEAAKADGKQSKLADGGGLYLLLHPNGSKYWRMRYRHGGCEKTLALGVYPAVSLKQARELARAARAQTAAGIDPVAEHHRTRPGSGRSLPEIARAWYGSRQGQRADNTLEGDRRSLAYLTDYYKDNTDINDITTAGVSKFIEHLNRINIPACARRTVQILAQIWDYAVQRGIITDERRNPATTARPLLNTSKPKPQPHIRPDELPDFYRTLQTAHDLHPYARPLLLLAALTVPRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVPLSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTPANPNTPCTDSATSSPTSAPPEKTPSQQTSPLATSAAPPSNAPASQACTTTPPTATASKSGANSPNGTAATAKHTKPPPKTLAIKPAA
891916..892179                     hypothetical protein; GHB95_04725                                                    N/A                 NeisseriagonorrhoeaeMADILPSDKRRQPPKTKGNPINIIEQETKRTELRKIDAEIAKIIADAHKINAESVKIAQESRWYPMMAATGLVTAIAAVLALIFKFA
892216..892500                     hypothetical protein; GHB95_04730                                                    N/A                 NeisseriagonorrhoeaeMNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGECPGGHYRHSENGITLYDFIFFGGKPADEARFAAVLTETCRRAVKKIGSVPD
892522..893175                     PROPHAGE_Neisse_MC58: IS1016C2 transposase; GHB95_04735; phage(gi15677271)           3.20e-109           NeisseriagonorrhoeaeMKITHCKLKKEVQKEPLRSFVPEVTARSAADILGIHPDSAALFYRKIRTVANHRLALAADEVFERPAGPGGSCFGVRRKGGRGRGAVGKAVVFGIPKRNGRAYTVAADDAEPETLLPAVKKKIMPDGIVYADSPGSRGKSDAGGFTRCRINRSKEFADRRNHINGIGNFWNQAKRALRKYNGIDRKPFPPFLRECEFRFNFGTPSRQLKILRDRCGI
893230..893442                     PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; GHB95_04740; phage(gi971741518)     7.59e-13            NeisseriagonorrhoeaeMELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPDTETRRADMPLEKWRQFLDWIEKTNAV
893627..894141                     phage baseplate assembly protein V; GHB95_04745                                      N/A                 NeisseriagonorrhoeaeMTDRQIDNLIKPATIADTDPASAHNTAALPPTGCPISSPLQAACQYGASQVSAKPAPSYPLPANPRTAFYAAKPPTDTPPRPPTPPKPSSDFPTARTSATTTTAARWNKPLQAPSTPPKPPPDTPSTKPPPPKGCPTKTATAKAAACPSTPTPTTPAVQRKNPNGA
894138..894464                     PHAGE_Pseudo_phiCTX_NC_003278: baseplate wedge subunit; GHB95_04750; phage(gi17313236)     3.51e-21            NeisseriagonorrhoeaeMTDAENGRGQDTLAHIAQSIRNILFTRIGTRLMREEYGSFIPDLIDMPAGHAAIALIHQAAVTALARWKPRITVRRIQADTADLAAGKIKLTLDVTLADGGERTYRIK
894485..895747                     PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; GHB95_04755; phage(gi937533298)     1.15e-47            NeisseriagonorrhoeaeMGNSRLSQLPAPAAIEETDFEGIFARKKAALTALCPESIRETVAQTLELESEPLTIDLQQQAYQELLVRNRINEAVKANLLAYAQGSDLDHIAAQYGLSRKTIRAADPDANPPVAAEYETDDAFRARVQAHPEKYAAGPRTAYEAHAIDAHPQITHARAVRRAAGTVEVYIKTQSGTPDETILTAAREYLSAETRRPLCDNVQVTAAQPKDAAVEYSAEYHPAANIQAERQTACEALDNLWRQNAHIGASVALSKIIGALDTPGVKKNHTAQPRRRHRMRQRRIHPNHVHARARINEQHRPREQQPPATRTGKADRTRNCRRLPPTRPRPMRPRIFTLSRLRKKHRHGRGLGLCRNRRSPPQPHRRLCRNPRPKRHAVRHPRPLPHLAAGRNPNYRTRRRVQVGRLGLVRRQPHIRQARG
895707..895934                     PHAGE_Burkho_phiE255_NC_009237: gp25, tail fiber; GHB95_04760; phage(gi134288819)     1.66e-11            NeisseriagonorrhoeaeMFDGSRTFGRREGDWAEYRIVLTRPVSIRQTARIRAMLAEIAPLRCELTALDYRNHPHRWNGKIRFNGEYGFGTT
895974..896479                     tail fiber protein; GHB95_04765                                                      N/A                 NeisseriagonorrhoeaeMANATEQNQFDQAVRLIEPGDSVVVGPGAPVNQPLQALANRTLLLKNQTEALQTASDTKAAPSHWARPGKSPQQAKTPSQKTATPTPSTPHAPTAPASSDTMPLAKPKTPPPPPKPSKPRSTKPAPPPRPPTSKSPSPTTKPLPAKKPLPPKHNSKAASGCPPTRRTGA
896708..898161                     PHAGE_Haemop_HP2_NC_003315: tail fibers; GHB95_04770; phage(gi17981847)              2.73e-18            NeisseriagonorrhoeaeLNSLKTDGVYSLPTAVGSSNLPVENTACHIQVIAGTQPGWCRQLGYPAYTSDVYERYQTSSANDDWSAWKKLNSEGIPAGAIVSFPKAVRNPAGYLKADGTIFAQNTFSTFTAPWATQTNCPTPVPTSASPRGFRPTKSRRAGWRLTTSESAPNRLIPNFTACPKNTDTSKTSRRRKTALSATRATAWRSERSRKTKSNGTSTKYFHTGQTTQTPPPSVTKTAMKGKEARSYRLGRTATTTTAFPRDWTAKWQRAAQKTAPKPWFNCASKPPTPWAKPCSGSPTAKPPTPAHWTRQGWRKVCRKKPTATTPTPPPKSKGWTKKSAPPLPRNSHAKPSAAWILSDSPTAQYRPAVTGLQEAAAPETKLSSPSPLPTTTSNASYPNAIRDASTAKGNTTGCLSAQKTTPPPLLPTGTKAVATGWPSANPPRETPPAPPRSPKYLKSMKNRKERVEDHQPDSETAAATEASTSPWGRAA
898273..898602                     hypothetical protein; GHB95_04775                                                    N/A                 NeisseriagonorrhoeaeMPRQSCHSSPFPRKRESGTQTRQESIGKNNPTAVIPAQAGIQTHNVKAVYQKKPKPNALDFRLRGNDEELGSDERREQPRKKPPTPSDGIGNKNRTAETARERIAGRAR
complement(898618..898923)         PHAGE_Aeromo_Aes012_NC_020879: putative XRE family plasmid maintenance system antidote protein; GHB95_04780; phage(gi472438177)     2.33e-14            NeisseriagonorrhoeaeMHNPAHPGLVLKEYINGASITDIAKRLGVSRVALSRIVNAQSSITPEMAVRLSQLLNTSPDFWLNMQAGYDLWQIRQRKTFDIAPLFPEPPLSSMKTGART
complement(898937..899216)         PHAGE_Mannhe_vB_MhS_535AP2_NC_028853: plasmid maintenance system killer HigB; GHB95_04785; phage(gi971749637)     8.29e-10            NeisseriagonorrhoeaeMIVSFKHKGLERFFKTGSLSGIQAGHSVKLNLLLTALNAAQTPSDMAVPSWNLHPLKGSLSGHWAVQSQRKLAFDFSFQRRQCRSCRLSGLSLG
899275..899287                     attR                                                                                 N/A                 CGATATACAAAAA
899301..899914                     PHAGE_Haemop_Aaphi23_NC_004827: putative tail fiber assembly protein; GHB95_04790; phage(gi31544054)     7.77e-18            NeisseriagonorrhoeaeMTIYFKNGFYDDTLGSVPEGAVAVGGEEYAALFAGQAQGGQIAADSDGRPVLTPPRPSEYHEWDGKKWKISKAAARFANSRFAKQKTALAFSLAEKADELKTASWRAIPKWKSTAFTGRKKKPSRGRRTTTPRPRCWRKSPPQGANWTFLERLSKNPPAWPLPSTRLSESGSNLKIDIPSKPRQHMRKGKSKNGRTSAGA
complement(900065..900322)         hypothetical protein; GHB95_04795                                                    N/A                 NeisseriagonorrhoeaeMPSECGAAAILPRIPFIGGAALVEPRVVLPAFQFADIRLPAVVAVEKYAVDQGIYSGLTKTGTALPRLAVLFVLSAASSPCPDFC
complement(900376..900759)         PHAGE_Haemop_HP2_NC_003315: hypothetical protein; GHB95_04800; phage(gi17981828)     2.04e-17            NeisseriagonorrhoeaeMIYYPAVLFQDPDQSNWGVIIPDLPGCYPVGDTVADALADAKAAAMFHLEGLLQENLPIPEAQSIEVNRDNPDYADAVLWTMVEADDAALTGQVRFNVSWPQHILNRVDACTAARHETRAVFWRKPP

#### region 4 ####
complement(1123582..1124616)       PHAGE_Prochl_P_SSM2_NC_006883: phosphoribosylaminoimidazole synthetase; GHB95_05785; phage(gi61806048)     9.38e-82            NeisseriagonorrhoeaeMSTSLSYRDAGVGIDAGDQLVEKIKPFAKRTMRPEVLGDLGGFGALVEIGKKYQNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLFFLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVGVVEKENVITGLSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLREAVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPKNTVAQIDAESWELPKLFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVRSFLSGQGETVYRLGCIRERQGNEHQTQVA
1124857..1125045                   hypothetical protein; GHB95_05790                                                    N/A                 NeisseriagonorrhoeaeMADGRKGFFDAIIKINIFFFPVKTPTLGAANPIAGGSTRFRFGAEQMAVLYVPFCVLKHIGR
1125134..1125148                   attL                                                                                 N/A                 TTGGTGCGGACGGAG
1125305..1126294                   PHAGE_Mannhe_phiMHaA1_NC_008201: integrase; GHB95_05795; phage(gi109289985)          3.96e-101           NeisseriagonorrhoeaeMATITQRNGKWRVQIRMKGVSRSATFERASDAKAWAARIESQIMDGIQGNAPRNTIFADLIRRYLSEVTPSKRGAREESYRIGRALKTPLAKVRLADLRPQDFADWRDQRLQEVSPTSVGRELTTLSAVCEHAMKEWGLLRENPVRKISKPKKSRARTRRPTEQEIADICAALLYRPNEKPKMAVQRVAVAVLFAIETAMRAGEICGLKWADVNMRRRIAHLPITKNGDSRDVPLSLRAAELIEQLRGIDDTWVFSLDAKSLDVLFRRARDNCGIQGLHFHDTRREALTRLSKKVPVEVLAKISGHRDLRILLNVYYRPDMADIAKMLD
1126636..1127115                   DUF4760 domain-containing protein; GHB95_05800                                       N/A                 NeisseriagonorrhoeaeMTDNLIQIATPILTVIGVFVAAYGIMRNTENAKKRATIDMIMAERNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAILTVLNQREFVCAGVLGGALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQEFEAVARKWKKKPLKTK
complement(1127175..1130222)       PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381: tape measure protein; GHB95_05805; phage(gi658311478)     4.81e-50            NeisseriagonorrhoeaeMSDLEAKVRITVENHTKQGFDSAAADADKAAEKMRSSGDNAAKGFKAAIDSMHETMRNLHADVKAGFEAAGNQAQQASEKVRAEVGKIGSGLSGLTKLLAGLATADFAKSVLDTADAMQSINSQVRQVTSSETEYLAVQQQLLDTANRTCASLESTANLYVSTSRALKDYGYTQQEILKFTEATNNAMTIGGVGAQQQAAALFQLSQALGSGVLQGDEFKSISETAPILLDTIAEYMGKSRDEIKKLGSEGKLTADVIFKAISGASEKFGEQAAKMPVTMGQALTVFSNNWQSMVSKLLNDSGTMSGIAAVIKLIADNLNLVVPIVAGFAVAVAAAVAPTLALNLALLANPFGIIAVAIGTVVGLIAKFGDEIDVFGGGWSNLSDVIRAVWQIITETVGEAVGTVKSWFDGLTGRLNEGAGGWPSLFGRVMSVISSAIGAYVNVYINIFATGWMLIKEAANDMPQFFANLGKAIGNVFISAIERMINKAVGMINSMIDFANKAASMAGISGIGKLNKVRMGRMDDGGLGERIHDSLTKDRAGAMANAVRERAADIHEADALKGRGGGGHAKTARKKPGANQGGGKGGKSRSGGPGAAKDPMQAWEGEIKARKLAHREMQRETLAHQEWDLAREAEYWRAKLATVDANGKTGVKIREKILTLEDQLSKQSTEAKMNQAAEWEKLDKHKLEMEKDAADQALADGRISQLERLDLEIEFENRRYQIAYDALQERIALAEQDPAYSQAAIGKLKAQMGELGRGHERTQAKNEGKRENQRRKDAPNVMEMLQDGGRNVWQEAQQQMGQAFTAMLARAQNFRQAMNGFFKSMGQTFIQEMVTKPLTGLMRRMVEESAIYKMIFGTKETLETAAAAKTAATKATETTAVVSSNAVQAASGAAASQAHIPYVGPILAVAAMAAMMSAVMGLMGGGGGSQTTTTTTRIPSAAGGWDIPAGINPLTQLHENEMVLPAEHAQTIREMADQQGGGSTVIINSTGGDFIHKNDLAKLLKQMKRDFKFV
complement(1130252..1130401)       hypothetical protein; GHB95_05810                                                    N/A                 NeisseriagonorrhoeaeMNAEGFCEKQTACRPDGRRNAGDRADLKAFEFAGRELANYREMLKRYAV
complement(1130713..1130886)       hypothetical protein; GHB95_05815                                                    N/A                 NeisseriagonorrhoeaeMTTAVKPPADLARPCPKLPHLEGNTGADVLPWSLQVIGLYKDCKARHGALVRALGAD
complement(1130870..1131214)       PHAGE_Entero_vB_KleM_RaK2_NC_019526: hypothetical protein; GHB95_05820; phage(gi422936900)     3.73e-09            NeisseriagonorrhoeaeMIGALLKNWKPLLILSAIAFFAVSWQLDRAAQYRRGYGAAVSEVSERLKAAAVEHAEHARKSSAAYQAQKAAREEKERVRYVQTLKIIEKPVYRNACFDADGVRELNAAVDDGG
complement(1131215..1131754)       PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381: endolysin; GHB95_05825; phage(gi658311460)     6.54e-62            NeisseriagonorrhoeaeMKELKWIEEARKYLGAHEKVNGKSNPVLLAMLQEMGNFNQEQKAWWKETDTPWCGLFVGYCLGKSGRAVIRDWYRAKAWSMSGLTKLEAPAYGCIAVKPRRGGGHVFFVVGKDAEGRILGLGGNQGNMVSIIPFDPADIDGYFWPSKLIGGKPVPSSPAEGRYRLTAAAATAKQGAGEA
1131961..1132197                   AbrB/MazE/SpoVT family DNA-binding domain-containing protein; GHB95_05830            N/A                 NeisseriagonorrhoeaeMLRLQKWGNSAAVRLPARLLTALNAKIGDALETEIRNGELLIRPVKRYRLSDLLAETEAAPPRAEGWEEMPDVGQEGV
1132197..1132544                   PHAGE_Strept_EJ_1_NC_005294: transcriptional regulator; GHB95_05835; phage(gi39653708)     2.91e-11            NeisseriagonorrhoeaeMYIPERGDIFHLAFDPAAGTEMKGGHYAIALSPRAYNRATGLVYACPISQGRAAAARSGGMISTLLGAGTATQGNVHCHRMKALDWKIRRAAFRETVPDYVIEDVLARIGAVLFD
complement(1132910..1133242)       hypothetical protein; GHB95_05840                                                    N/A                 NeisseriagonorrhoeaeMGFLQFGLLFAAAGGVLGAVWASLQERGRPVQAVLEAFISAIAAAAAAERFVPLDQAWTCAAAGVFAGMMTGHALDTVRALAPKVLRGYLGGLAEKLTGVKDGGSSDGKD
complement(1133243..1133713)       hypothetical protein; GHB95_05845                                                    N/A                 NeisseriagonorrhoeaeMLRFLTERRFLPAGFQAWLFGTATRVLEAVSGLGLSGYAAVFALAPDEIYAWRIYYKFQDIPEAWTVGVLAAAGLLQTALLFARGVRACVASAYLLLFSGFVWFLVSVAFWGAYPPLNTGMVVPPLLAFFCALAGNNALRFLFSAQKSRGLADEGS
complement(1133784..1134089)       PHAGE_Burkho_AP3_NC_047752: hypothetical protein; GHB95_05850; phage(gi100027)       1.25e-06            NeisseriagonorrhoeaeMIEDKKIVALNFAVEDGMTGASAAYHVVEHIGADYRNGYVTATLNGYVSENAFKSGKRYLLARTLDFQETDITAPDPGWVYRKALEGAAGIPKDAQPVYAE
complement(1134201..1138346)       PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381: central tail hub; GHB95_05855; phage(gi658311483)     4.58e-11            NeisseriagonorrhoeaeMGGKSSTVTSAEERILSLQVQRSSQGLTLPVIYGRTRVAGNLIWYGDFVTIEHKTTTRRGGKGGGGVKQVGISYTYEAAVMLALCEGEIQGVGRIWRDKEKFDSPAQLRLTLMRGGDEQPLWTHLQQAKHQGQALNYSGTAYLCSPNYELTKSAQIYQHNFEVIGKSGYSGNIPDANPREIVLDLLTNQRYGCGFPSQNIGDTDRYSNYCRAVGIFLSPAYTEQGEAQRNISELLEQTNSAAVFSQGRLKIIPYGDGSHSGNGAVYVADNKAAYDLTDDDFIVSGAQDPVKAGRKTNADAFNQIQVEYLDRDNDYNVAIAEAKDQANIEQYGLRPKDAVRMHGICDAKVAQKVAQQLLQRALYVRNEYEFKLGWKYCLLEPMDIVTLTDAGLGLNKTPVRITEIEEDGEGVLSVKAEDCPAGVYTVSEYPTQPSSGYSADYNVSPGNAHVPVIFEAPLQLTGGEPQIWLATAGGGMWGGAEVWVSADGDSYTRVGAVNRKARFGALTADLPDGAVFDRTNTLGVEISAGQLTGGTEQDSRDLLTLCYVDGEFLAYADAELKGVGRYTLGNLTRGAYGSAVNAHAAGSRFARIDEALFKYAVPRNWIGRTVWVKLVSYNVFGGGIQDLAEVPAYSYTIEGAPLGQIQNLRLTSSWAYGKEAVIAWDKLDGADTYDVEIYAGGSRRRLRAVDGIVDNSYTYTQADMKADGGQVRGIVFKVRGRAVTGKTGNWAQIAAQNPQLQALQGISIDSGLRQAFFTCQKPAEEDFAGIIVWVCENAACPAADANKAYDGAETFITIAKCGGKPLEKGKTYYLRAAGYDSFGKDNLKISGSISFTVYDVSATDLSESSLNKALRDKINLIDGNGAGSVNERVEAVRSTADGNAAAVQTHARSINGLEAQYTVKVDANGKVAGFGLATTPKNGTPESKFIVNADRFGIGAAGKADVFPFVVDTQKNRVGINGELVVNGKAVVDKLNAGDIHGGKIAADTLDANRLKAGSVTAREIGAAAVTADKIGANAVTADKIQVADLSAVSSNLGSITGGSLNIGGGNFTVSSDGILTADNAVIRGRIEADSGYFNGTVRASSVEGDVLRAHRLRWTEGNVWVLDLDKDPLPRVLIPNFYVVSETFGNNRVQAKLLLNGGVLAPREVRETENYTNYIWRGRTFGRYEDLPPRARGGGDYTQQSGSRYRTRLEYQIQVIPAGKPVSLKLSLASHESVFSPFVSVSYLAQSDYEYKQLLGRMVWRTFAESFRYDSKKQVYLGGDRRVHDYQNQMYKHWNAYGGLLQLPDDIYGISFEYRPFTNADWSTMLAFDRSDKFVVVKKYRGHAPQQYSLFQEEFNTAVPKSNLLFFVEHWWQYIELRNIRVLIPESRENEVWQVG
1138586..1138864                   PHAGE_Vibrio_vB_VchM_Kuja_NC_048827: terminase small subunit; GHB95_05860; phage(gi100071)     4.58e-18            NeisseriagonorrhoeaeMESQTFASVFDALCDTPAEAANMRLRAGLMMHIADTVRENGWTQKQAAEHCGLTRPRINDLLNGKIDKFSLDALVNINAGLGQCISLSFAPA
complement(1138892..1139323)       PHAGE_Dinoro_vB_DshS_R5C_NC_041921: capsid decoration protein; GHB95_05865; phage(gi100066)     1.49e-15            NeisseriagonorrhoeaeMPSETDLRARIVEEARSWLGTPYHHHAMVKGAGVDCAMLLVAVYGAVGLLPEGFDPRPYPQDWHLHRDCERYLGFVTQFCRETESPQAGDIAVWRFGRSFSHGGILAGGGKVIHSYIGRGVVSDDIGQAELIGRGVRFFTFSF
complement(1139325..1140179)       PHAGE_Caulob_magneto_NC_019407: putative tail protein; GHB95_05870; phage(gi414088603)     9.38e-20            NeisseriagonorrhoeaeMKAATKELIDLLHGGDEFQMADLYTITLSGGRVLRHTGADMPVVWDGQAYGAHELVIKRGATRTAVGLEVDSNTLQISAAPDYRLEGLQWAEAALGGVLDGARVRIDRVFFDAGLRPVGAVNIFSGRVSDVSGGRSSVKVDVKSDIELLNVSSPRNIYQAGCMRTLYDDGCKVNREKFTVNGRVTENSRTGTVLKHNLTQPDGWFSQGVIKFAGGRNAGLSRTVKAHGGNTFELALRLPYPPQAGDAFKVYPGCDKRRDTCKDKFDNIVHFRGFPFIPSADTVV
complement(1140176..1140775)       DUF2460 domain-containing protein; GHB95_05875                                       N/A                 NeisseriagonorrhoeaeMGNAVFPTFPGLKWGRKKTAVWSTGTQKSASGREFRTAYYTYPQWRFSLSFEVLRTKASVNELEKLAGFFNARKGSFESFLYEDPADNAVTDQPVGNTVQGVARYQLVRSMGGFIEPVSAVKERPAVKVGGTALAYGRDYTVTDKGVLVFNTPQPPGRPITWTGGFYFRVRFTSDTVDFENVLGSLWAAKKIEFTSVKL
complement(1140775..1141041)       hypothetical protein; GHB95_05880                                                    N/A                 NeisseriagonorrhoeaeMIAHVCASTGWTWDYVADNLDLPRIKHLNEYWREHPPVHILAASYMGVKPSSGSVQSEADEAEAVGMLGGGELSEDEFDALLKAKGII
complement(1141053..1141382)       hypothetical protein; GHB95_05885                                                    N/A                 NeisseriagonorrhoeaeMTVRIKGVTVELNGADYVIPPIALGALEQLQERIGSFDGNAADAGQISTVIDCAHAALKRNYPDLTREEAADLIDIGNMNEVFAAVMDVSGLKRKEQEAAQAGEARAAD
complement(1141443..1142216)       hypothetical protein; GHB95_05890                                                    N/A                 NeisseriagonorrhoeaeMQLTFGSGEVFAQMITDAYGNRVQNATPVRIMGLQEMSVDLSAELKEFYGQNRYPLAVAQGKVKVSGKMKGALINGLTLNTLFFGTEYATGTMKALWAETTGKVLDGDNYSYLQAAAPGGGKFAEDAGVMGQDGTAYIKVASSPKQGQYTVSESGVYAFNSSDKGKTVYPSFTYTQTMPPAKKIELTNMATGNTPTFKMRYLTQFKGKKALLELESVTSGKLGLFSTKNDDFSVPEIDFTASTDEAGFKIGTLWIQE
complement(1142242..1142670)       hypothetical protein; GHB95_05895                                                    N/A                 NeisseriagonorrhoeaeMNREAVYSALWAKLDALDGFVTKSRKLVHWNDVKRYDQPALFMAQGDMQALTLTGRETKWILRADVYLYVQTAGQPPAPVMNPLIDAVCNAVNAVHPVTGKTDLTADGADIEYCRVEGTVETDEGTLGEQAVCIIPIVICAA
complement(1142667..1143149)       PHAGE_Vibrio_12B12_NC_021070: phage virion morphogenesis protein; GHB95_05900; phage(gi481019160)     4.26e-07            NeisseriagonorrhoeaeMLKMEFIGGGILAAVFKAYAADVQDAVVKSVGRSALRLQREVKQNRLSGRVLRVRTGNLRRSVHQRVNVSGNVVSGEVDTNVRYGIAHEYGFAGSVNVKASLRQVKQAFGKPLKPPRYVRVRAHTRDVKLPERSFLRSALRDLTPKFADDLQKSIGKVLK
complement(1143149..1143679)       PHAGE_Strept_phiSASD1_NC_014229: gp29; GHB95_05905; phage(gi298103494)               9.28e-07            NeisseriagonorrhoeaeMAAPVSLEEFKQRIGVEHDRRDDFFLSVIDGVSAAAEAYIGRSLLAADYVGRYDGNGKDRIVLDNYPVLSVSSVKINGADAGGWEFDNWLLMRPEGFARGLKNVEVSYRAGYERMPADIREAVMIIAVQRVNEIEGKGVRSKTLAGETVAFSTFGNSGGMPPSAFAILNEYKRKGV
complement(1143682..1144032)       hypothetical protein; GHB95_05910                                                    N/A                 NeisseriagonorrhoeaeMPSENQTAFSFGDFEMTVKLKAPEGFTDVSFGSQSYAADENGIVEVPSEAAEFLYQFGFGNVASEPAEGPEKAKRGRKPKTGQPAGQSEPAEAAEPAEAEAEAAEAAEPAEAEKAE
complement(1144039..1145538)       PHAGE_Thermo_THSA_485A_NC_018264: hypothetical protein; GHB95_05915; phage(gi397912636)     2.35e-31            NeisseriagonorrhoeaeMNVNQLTQETIELMKSAQAGGGPPDKGFTQPAGFTAGLQTYDLSAPSQKLYPVLTPLRNRIPRVGGGRTIGSNWKAVTNINVGNQRAGIGEGRRGGVINHETVERNAQFRAIGLENQVTFEADYAARGFEDVKALAVAQTLQATMVAEEMILLGGNTSLKAGVTPTPTAVVSADAAGKISVSTLSVICVALGLQAYWDVAGANNGATGQSPNIKTAQVPAKITRRNADGSTDTFGGGSAQKSAAASVSGIATGKKVTAVIPAVRGAVAYAWYWGAAGSEKLGAVTTAAKVEISADAEGTQTAASLPSEDNSTSILEFDGLLTQIALPDSGAYWADNKGNGLTSDNAGGVYEFEEAFAHFFTRYRLSPDTVYVNARDLAALTKLIIGNSGAPLIKLNVDVNNTANIRAGVVVGSYMNKITGDDLNIVVHPNLPAGTYLFYSSRLPAYVQGVGNLLQVRTRQEYYQIEWPLRTRMYEYGVYADEVLQGMFMPAFGMITNVG
complement(1145579..1146736)       PHAGE_Strept_Jay2Jay_NC_029098: capsid maturation protease; GHB95_05920; phage(gi985760259)     2.63e-08            NeisseriagonorrhoeaeMTKLYAQIAKTEAQDDGTVKVWGYASSEAVDSDGEVVAAEAMKAAIPDYMKFGAVREMHGSNAAGTAIEINVEDDGRTFFGAHIVDPVAVTKVKTGVYKGFSIGGSVTARDDLNKSQITGLKLTEISLVDRPANPDAVFTCFKADKPKDEAGAADKDGKPSDKPTEEEDENPKDGDKGPKTEDKGDKDAGKKDEAGKSASVNLSESEIAALKAVLAKADKPKGGTAAKSMYQVKSPADVLMSLKWLVEDAAYDNIDEAVTAQIKESAAGLAESLKALAASEADKPADGLAAKAGKSGDLAKAESADELAKAQDALKKSNDALAKAQAEIESLKKQAVPPKGSTKAISKAEDNGEDPLKGFQPIVKNDGTLDDVATLIKAKQTGRL
complement(1146804..1148951)       PHAGE_Thermo_THSA_485A_NC_018264: hypothetical protein; GHB95_05925; phage(gi397912638)     3.01e-56            NeisseriagonorrhoeaeMSKKTPLSQGFIARVAAGVRYAFTGNADGWFDAGEPPAPAAQQAEGRRFDYEPFYNVGHSKPREREAVGFAQLRALADNYDVLRLVIEARKDQMECLKWTIQKRDVESTEDDESQRKDRKVDEAVAFFRSPDKEHTWADWLRILLEDLFVIDAPCIYPRKTLGGGLYALEVMDGATIKRVLDNTGRMPLPPDTAYQQILHGMAAVDYTADELIYRSRNNRSYKVYGYSPVEQIIMTVNIALKRQVHALEYYTAGSVPDALVGVPETWSADDIRRFQEYWDLLLSGETAQRRKMRFVPGELSRNFRETKQPPLKDVYDEWLARVVCFAFSVEPTPFVAQVNRSVAETSREQSLSDGMGSLKNWVKALIDDVLARYMDMAAYEFVWKGEESLNPKEQAEIYAIYKNAGILTADEIRAELGKEPLPGQGQPEPDKQDGRKPEEPPNQGAEKLGKSESPMSEDESAALIEAYLLTRIDGLAEQIAALIEGAAVDWQAGDLAAELSRAAGVVANGLDFGDWSGLSDVVEPIIRRVAEDGAVAALLRVMPEPAAGMVTNIRSRAVKWAHERAAEMVGMKRAGGGLVRNPAAEWQITEGTREMIRAQVAEAMRNGDSVQELAVRLKESHAFGNARARTIARTETAMADGMGNLIGWEETGLVAGKQWITAKDDKVSDVCNANGGMGVIGLHEPFSHGALTIPGHPNCRCAVVPVLAGDMPES
complement(1148948..1150369)       PHAGE_Acinet_YMC11/11/R3177_NC_041866: minor tail protein; GHB95_05930; phage(gi100056)     0.0                 NeisseriagonorrhoeaeMALGQFDDVETSVIRSLSSASLYMFTRRMFYQRRGYVWQRANHHAPICNALERVFNGETKRLIINIPPRYSKTEIAVVNFIAWAMGRVPDCEFIHASYSAALAVNNSVQIRNLVQHEEYRAIFPDLALAGESGHHWKTTAGGVMYATGAGGTITGFGAGRHREGFGGCIIIDDPHKADEARSEVRRQNVIDWFQNTVESRKNSPDTPIILIMQRLHEKDLAGWLLDGGNGEEWEHLCLPAIQEDGTALWPEKHDIETLRRMEQAAPYVFAGQYLQKPAPPDGGTFKPDNLQFVKALPAGNIRWVRAWDLASTANGGDYTAGGRLGVTEDGRYIIANVVRGRYGADERDRILRNTAQKDGVKTKISIPQDPGQAGKSQTLYLTRQLAGFSVSAGPESGDKVTRAGPFAAQVNIGNVMVLDDGTWDTDALIAEMRMFPNGRHDDQIDCLGRAFGELLDTRTGMIDFLRSQVEAVK
complement(1150431..1150880)       PHAGE_Entero_Sf101_NC_027398: terminase small subunit; GHB95_05935; phage(gi849122263)     3.51e-31            NeisseriagonorrhoeaeMSGTKRKLGRPTDYTKDMADKICEKIANGRSLRSICAEDGVPPMKTIYRWLEANEEFRHQYARAREKQADYFAEEIIEIADSAQAESAAVSKAKLQIDARKWAASKIAPKKYGDKTELDVKSGDGSMRAAVRLDAEEYRKIAEDVLRRV
complement(1151173..1152000)       PHAGE_Salmon_vB_SemP_Emek_NC_018275: antirepressor; GHB95_05940; phage(gi399498814)     1.10e-39            NeisseriagonorrhoeaeMNNSVQISNISIHQTEIGLFSLNDLHRASGGEDRHAPRRWLQNIQTNDLIKELEKDGKPSIQSKQRLGTFVCRELVIAYGMWISPKFALQVIQTFLAVSDGIKSAKTTADDRTGLRQAVAALVGRKGIDYSSAYSMIHQRFNVESVEDIPAGKLPEAVAYVHALTLHTGLTGEVLDREPLPAPQPALPISGNALYDLAVAVSYGARAIQMGRDVSLPLKQLGCRQAVTMWTVWAETRSRLKAAANALEALSAHADAEHAEKIRPILPEIRNLSAV
complement(1152291..1153250)       PHAGE_Burkho_phi6442_NC_009235: gp46, lipoprotein, putative; GHB95_05945; phage(gi134288618)     5.67e-06            NeisseriagonorrhoeaeMAYINILAGDFHKGKAVLKKDCIVLSRGGKVALLDIAGYEVQDGGVIEVVFFDGRRMLVEKNDAFLQAVKVALYNEPQNPEERRQQYNQRQVNSAAKAKKAKKIKLIVGGIFVLLFVAMCAVPKKELTPEEKAAAEKQKIDGKIASGVREFKYDKKAYPKLYKQWGEKAVNEMNGYLPRIAEHIAREDSCDAVETVDISDSRSNPKAKQMVFFVDCRNGKRFFVSTDDLNSGRKSTAEQDKKIDSSAVISQCDEAIKAQLNHPRTFDPHILDTATGVNQNGNVLVTRGFTAKNGLGMQIDYRAYCVITDNKVEVSIEQK
complement(1153311..1153718)       hypothetical protein; GHB95_05950                                                    N/A                 NeisseriagonorrhoeaeMNQQEFEFMNDLARAFERRYRDTRSLNRCLSIEGRYMGEEACPHKPEIGLRYGEDAMFLTLQAWAKVDAPQQEAVRISFGIGAKSQAAYEERLQAEIRRRGEGPLHLQTDLGLAAWYGAIRQAAGDDFDLLFEKV
complement(1153985..1154530)       PHAGE_Entero_cdtI_NC_009514: holliday junction resolvase; GHB95_05955; phage(gi148609431)     1.22e-07            NeisseriagonorrhoeaeMQNLPQQGSPAKARGKTRGGGSRRDDGGKAARIHPRRARRLPDIGRRPVDATGRGMRVIRLILPYPVSANRYWRIWRNRAVRSAEAAAYRETVRRIAQGAGAMPSEGAVAVYVRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADYADEPVAGGGLAVEVGELDEK
complement(1154666..1154815)       hypothetical protein; GHB95_05960                                                    N/A                 NeisseriagonorrhoeaeMDTLLSIITALSFAGAATLAVWLLVEASDAVLRRKRDGKGEDDFDGFGY
complement(1154992..1155486)       PHAGE_Burkho_BcepSauron_NC_049851: hypothetical protein; GHB95_05965; phage(gi100185)     1.43e-08            NeisseriagonorrhoeaeMTVQNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRADAPKFKKLKCRRYEKMYAGLKDCGFDGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETAGGGI
complement(1155524..1155807)       hypothetical protein; GHB95_05970                                                    N/A                 NeisseriagonorrhoeaeVRETCFYCNHADFKTNTGTPVRGFAKCAKARNAEERAKHYPRTNPCAAGAFQTASGAAVAKRTAVLGEYPPAMRRIAGRRVKRFGNIPAYPIFAA
complement(1155800..1156582)       PHAGE_Vibrio_X29_NC_024369: IstB-like ATP binding protein; GHB95_05975; phage(gi658311189)     8.42e-44            NeisseriagonorrhoeaeMALRNASDFLGAYGGGVRVERRQCAEHGGYAAKSVLRGVWTGCPACRKLEAADEMAAYAETLRRGAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMARAKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGDMLRTVKDSFGGGGGEAGAVGIFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLMPMLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWESYRA
complement(1156596..1157606)       PHAGE_Aggreg_S1249_NC_013597: HNH endonuclease; GHB95_05980; phage(gi100046)         7.32e-17            NeisseriagonorrhoeaeMSARLMGMAFKTGIPRGQRFVLVKLCDCANDEGLCYPSQETLAEDTGFAETAVRQHIKWLKDNNFIKSARRQRGRERKSDIYRINVALLEKCYAEAAKRKAARQAKMWEEPLDYEPSDFEPSDYEPSDFEPSDYEPSDFDAKNHQILSGEPSDFALRTVRFCAKNHQILSDEPSDFDGSLYVEPSVEPSVEPSGSNARGARAPAGPHPAKPQTAPPETAPAAKAKKTGRHETELSLLADYGITGQAAEDFLTVRKAKRQPLTETAMRLIAADAEKCGMTALQAAEYAIASGWGSFRADWLQNKTFGRSGNRGGPTHNQTAAVPDAGSYGDMPTTDF
complement(1157603..1157830)       hypothetical protein; GHB95_05985                                                    N/A                 NeisseriagonorrhoeaeMNQKQTQCKQIVDYIRNKGCITSLEAYQNLKVTQLAARITDLEGRGFVFAKPRMKAGGRGKPVTHYSIVKNGAEV
1158211..1158927                   PHAGE_Entero_phi80_NC_021190: CI transcriptional regulator; GHB95_05990; phage(gi824479623)     6.55e-41            NeisseriagonorrhoeaeMEKHETVIRLFDAAKTKGKNTPAETARLLNISQQTLKNWESRGISAKALPEVAQVLGVSETWLRTGEGSRTAPVLINPDLPHEVKDIHRPMMWSSNDPLPDDDYVFVPYLKESCFKGGAGAYEIPDYNGYRLPFGKSTLRRKGINPDNVFCCTLTGDSMEEKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYPDETAPLDSLSVIGRVFWWSVLD
1159087..1159626                   PHAGE_Salmon_vB_SemP_Emek_NC_018275: hypothetical protein; GHB95_05995; phage(gi399498806)     1.40e-36            NeisseriagonorrhoeaeMLNAYDVADFFLSPFEEEDGEQISNLKLQKLLYYAQGYALAILNRPLFAENIEHWQHGPVVPCIYRTYKKYGGSPLPAAHIEPDKYADEELVVLNRVRKEQGCYTAWALRNKTHQEAPWIQTRQGEVIGIALMGEYFRHALPQTDYNFNLEKLKTAVEDSFVSVPHFNGADDLEKWLEQ
1159627..1159986                   hypothetical protein; GHB95_06000                                                    N/A                 NeisseriagonorrhoeaeMQVLLGEDFKRALKNYPKEDRRKIAEFIAHVQQNGLSGLPGRNKSSDNVPADDPQWLEKVRFAQRHNLWHYHIGIPKYNGGRYGDLTSAYILHYTLCDGFIKIIGFDRHPPFILPDIPK
complement(1160003..1160221)       hypothetical protein; GHB95_06005                                                    N/A                 NeisseriagonorrhoeaeMANSNSGHSKKLRAATAAAATKAKLASGEYRQFSVQGRAEDVELILAAVEKAGGSRVQALAKICRRYLEGLS
1160705..1160905                   hypothetical protein; GHB95_06010                                                    N/A                 NeisseriagonorrhoeaeMNELISRINRFGARAKDEQSLLLKVGEICRDAAATWTTRKSESINHTAFTFTVKKDGLKEKVMIVL
1160938..1161414                   PHAGE_Iodoba_phiPLPE_NC_011142: hypothetical protein; GHB95_06015; phage(gi197085698)     1.68e-32            NeisseriagonorrhoeaeMEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQHEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWWAKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVAQS
1166369..1166383                   attR                                                                                 N/A                 TTGGTGCGGACGGAG

#### region 5 ####
complement(1654949..1655350)       PHAGE_Pseudo_phi3_NC_030940: hypothetical protein; GHB95_08505; phage(gi100035)      1.03e-30            NeisseriagonorrhoeaeMFIPAALHKDEHSAYGVTIPDLPGCFSCGDTVEEAVANARSAAYMHIDGMIEDGGFKNLAVSSIADLSQEPDYHGATWVMIEIDPAKISRQQIRFNVSWPQYLLDRVDEYTSANHETRSGFLAKAALLTMNQA
complement(1655452..1655634)       PHAGE_Acinet_YMC11/11/R3177_NC_041866: hypothetical protein; GHB95_08510; phage(gi100075)     1.65e-24            NeisseriagonorrhoeaeMNSLDVIALLKQDGWYKVAQSGSHSQYKHPTKKGRVTVPHPKKDLPTGTVKNIYKQAGLK
complement(1655804..1656622)       DUF3037 domain-containing protein; GHB95_08515                                       N/A                 NeisseriagonorrhoeaeMNQYAMRFAVIRFMPYVQTREFANIGIIITHPKSGYFDFKIEQRYSRLSRFFRRFDSSVYKAATRAFAEELQRIGKLAAYSAPDQIRAMLDHLTRPREALIMAAQPGVTLAPDRGQELNRLFDYFVARSFAKSQPEAELTRQIQAMLKPLQTAYPFKESTIGDPSGFHASIPLVQKAENGEIRKIIKPIYFGQKDPADIYYKSDKWIAGIKRLRRGGYIDRSEILFAYEPPERPDKAQEKALLDVLGDLEEQGIRLADNRSEGKIIRNFACG
complement(1656619..1657317)       hypothetical protein; GHB95_08520                                                    N/A                 NeisseriagonorrhoeaeMDRAEQGVTSPFICMAENGLEYFVKGLHATRASQINEWIGGNMAQALGLPVAPFELLEVGEELYEELPAKMKEIGKGICFGSLAQKGCALLEPADIPRIDTVMQRQIAAFDWFVRNEDRTIGNPNLLYRNCNNSLIVIDHNCAFDTGFNPNNFLQNHIFSSAFRQILEDWVLREEMELWLKSALPAYRKACDNLPPEWAWANEERDLPAAYNRSRTDETVRRIDNGTLWSIS
complement(1657556..1658266)       PHAGE_Salmon_UPF_BP1_NC_047875: hypothetical protein; GHB95_08525; phage(gi100006)     2.26e-45            NeisseriagonorrhoeaeMSEFKDRLKEARKNKNLSQENLAKLAEVSQSTIAALESGRNKKATNIAKLAKILDVSAFWLETGEGSRNTPVLINPDLPHEVKDIHRPMMWSSNDPLPDDDYVFVPYLKESCFKGGAGAYEIPDYNGYRLPFGKSTLRRKGINPDNVFCCTLTGDSMEEKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYPDETASLDSLTVIGRVFWWSVLD
1658382..1658570                   helix-turn-helix domain-containing protein; GHB95_08530                              N/A                 NeisseriagonorrhoeaeMDEPRDLVLFLKEKMSSAAIAKEVGCSKEFINKIGNGERKNPRYQIVDSLRSLYRKNQNQPK
1658650..1658805                   hypothetical protein; GHB95_08535                                                    N/A                 NeisseriagonorrhoeaeMKKQDRNRLSKKDRRLIKKAMLKAAAKGCDEVYKIAPGLKDGFELLGKQPD
complement(1658782..1658970)       hypothetical protein; GHB95_08540                                                    N/A                 NeisseriagonorrhoeaeMPSDLSFILAKELIRSGSIRLKGSTAKGQAGELAVFIRTLHQKPEESEPNTDNEYLIGLLSK
1659143..1659370                   PHAGE_Mannhe_vB_MhS_587AP2_NC_028743: hypothetical protein; GHB95_08545; phage(gi970580066)     3.33e-05            NeisseriagonorrhoeaeMNQKQTQCKQIVDYIRNKGCITSLEAYQNLKVTRLAARITDLEGRGFVFAKPKYKVGNCKNPVAHYSIAKSGIEP
1659488..1660552                   PHAGE_Haemop_Aaphi23_NC_004827: putative DNA replication protein O; GHB95_08550; phage(gi31544014)     2.79e-37            NeisseriagonorrhoeaeMMKPSESLRAAGRPIAYYPKLAKPLGGVNAAILFGHFFYWNDKTQYESGIYRTAEEIEIETGLSVQEQRTARAKLRERGVLIETEKRIEHRIYYKLNLDAFDDLMLQHSGGGESTAPKCNINSPELQNQHSGGGESTAPKCNINSPELQNQHSGSEESTAVIRTEDLTEDLAVYTPLPPNAGNGKGGLNADAFVSADAETCGRETGEPTSPKAESDSNGNGGLSGKPKNANVPRRRKTHGVPLQEIADLYNEVLGGRLPSVQVLNDTRKRAIANRWCEMLGTAAPNGKVRFGDKETGLAWFAGFFRKVAMNPFWMGENQTGFAVGFDWIFKAGNFVKILEWHPPKTNQAARGRA
1660549..1661910                   PHAGE_Marino_P12026_NC_018269: replicative DNA helicase; GHB95_08555; phage(gi399528354)     2.40e-70            NeisseriagonorrhoeaeMNRIEETEAVQSLASVGAEQNILGGILIEPTAIARCAILTPEKFYQAQHRIIFRALLDMAAANEPIDIITLNDKLEARGEAENAGGLAYLIDLNQNTPSAKNISRYVGIVNDRFVERGLLKASAAIEKIAVSKDGGTVAEKLSKAADELAAAGKDAVKRETKTFGQTVEDLIGGLDKRLDGVRFGLPTGLMKLDGMTGGLPDGNLIVIAARPSMGKTVLAENIARFALKQGKAVHFQSYEMSAVELARRGMAAECNIPMQNLKTGNLTQSDYANMPIYVSQAKEWKFDVNCDLLNVDELCFLAKEKKLTTGLDLLVVDHLHIMPRAGRDEVAELGNISRRLKNLAAELNIPVVLVAQLNRGNTKQADKRPNMADIRGSGAIEQDANIIIMPHRESYYDGNENPSIAELIIAKNRDGETGTVVCGWKGQFMKFEEEPDLAWQAPKHDEYDPYSV
1661927..1662172                   hypothetical protein; GHB95_08560                                                    N/A                 NeisseriagonorrhoeaeMRETCFYCNHADFKTNTGTPVRGFAKCAKARNAEEKATYYPRTNPCAAGAFQTASGAAVAKRTAVLGEYPPQCAGFEREGG
1662248..1662742                   PHAGE_Burkho_BcepSauron_NC_049851: hypothetical protein; GHB95_08565; phage(gi100185)     1.50e-08            NeisseriagonorrhoeaeMTVRNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRADAPKFKKLKCRRYEKMYAGLKDCGFDGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETAGGGI
1662919..1663068                   hypothetical protein; GHB95_08570                                                    N/A                 NeisseriagonorrhoeaeMDTLLSIITALSFAGAATLAVWLLVEASDAVLRRKRDGKGEDDFDGFGY
1663204..1663749                   PHAGE_Entero_cdtI_NC_009514: holliday junction resolvase; GHB95_08575; phage(gi148609431)     1.22e-07            NeisseriagonorrhoeaeMQNLPQQGSPAKARGKTRGGGSRRDDGGKAARIHPRRARRLPDIGRRPVDATGRGMRVIRLILPYPVSANRYWRIWRNRAVRSAEAAAYRETVRRIAQGAGAMPSEGAVAVYVRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADYADEPVAGGGLAVEVGELDEK
complement(1664078..1665040)       PROPHAGE_Shewan_MR-1: IS110 family transposase; GHB95_08580; phage(gi24375433)       6.95e-09            NeisseriagonorrhoeaeMRNAVGLDISKLTFDASAIVGNAEYSAKFDNDSKGLDQFSDRLKSLGCQNLHICMEATGSYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTDKQDAKLIAQYCRSAKESELVKRQKPTDEQYRLLRMTAAYAQIKSECAAMKNRHHAAKDEEAAKAYAQIIKAMNEQLEVLKEKIKEQTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKFAAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPDFIKRLEEKKKPKKVIIAALMRKLAVIAYHVHKKGGDYDPSRYKSA
complement(1665551..1665910)       hypothetical protein; GHB95_08585                                                    N/A                 NeisseriagonorrhoeaeMIHKPRYIKIVDENGDFTRVLRLHKFPDTSKVFYFEPMFWLKDGRVARKDSLFEVDYIYGADGCGFLPSNLTEFRKYCRKKHQKFKDDEVLVNRYAVDFLGAKEPPYDDRHVTSVKYFV
complement(1666031..1667059)       PHAGE_Xantho_Xf109_NC_043028: hypothetical protein; GHB95_08590; phage(gi100007)     1.34e-24            NeisseriagonorrhoeaeMILNNEDGLFKMELEDGTEADRPLYFCHIDGLDKRKFNARELAEGQIMSAPLRDVIPEGAVLIVGEAHYTYPVRAAGRPVPPYIQELTELRHHGHTVILMTRHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLDNPAGVSGVEAANWKPPKEAFKYYKSASRHQKFKKKVPWAVWALIAVVGFVGWKSYGMFQVYSKATDSRIEQEAQKESVVQTMTEQTASSETAPFEHSDNLKPEDFVPTLPEKPESKPIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYKDERQRTEQAAQSAKADKPQVLVMGGKP
