gi|00000000|ref|CP058908.1|  Pseudomonas phenolilytica strain RBPA9 chromosome, complete 3922746, gc%: 64.64%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
326404..326416                     attL                                                                                 N/A                 CACCCTGCCAATC
complement(335860..336987)         PHAGE_Agroba_Atu_ph07_NC_042013: tail completion protein; HU825_01690; phage(gi100293)     1.79e-18            PseudomonasphenolilyticaMAKRDFYEVLGVERGASEAELKKAYRRLAMKHHPDRNPGDKAAEEAFKEANEAYEVLSDASKRAAYDQYGHAGVDPQMGAGAGAGYGGANFSDIFGDVFSDFFGGARGASRGGAQRGSDLRYTLELDLEEAVRGTTVTIRVPTLVECKTCDGSGAKKGTSPVTCTTCGGIGQVRMQQGFFSVQQTCPRCHGSGKMISDPCGSCHGQGRVEEQKTLSVKVPAGVDTGDRIRLSGEGEAGTQGGPAGDLYVVVNVREHPIFQRDGKHLYCEVPISFADAALGGELEVPTLDGRVKLKIPEGTQTGKQFRLRGKGVAPVRGGAAGDLMCRVVVETPVNLGKRQRELLEEFRSTLQGDTSHSPKASGWFEGVKRFFGDV
complement(337110..339023)         molecular chaperone DnaK; HU825_01695                                                N/A                 PseudomonasphenolilyticaMGKIIGIDLGTTNSCVSILENGNVKVIENAEGGRTTPSIIAYTNDGETLVGQSAKRQAVTNPQNTLYAVKRLIGRRFEEDVVQKDIKMVPYSIVKADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLDVKRIINEPTAAALAYGMDKAKGDHTVIVYDLGGGTFDVSVIEIAEVDGEHQFEVLATNGDTFLGGEDFDIRLIDYLVEEFKKETGMNLKGDPLAMQRLKEAAEKAKIELSSSQQTDVNLPYITADASGPKHLNVKISRAKLESLVEDLVERTIEPCRIALKDAGIDVSKIDDVILVGGQTRMPLVQQKVAEFFGKEARKDVNPDEAVAMGAAIQGAVLAGDVKDVLLLDVSPLTLGIETLGGVMTPLIEKNTTIPTKKSQVFSTADDNQSAVTIHVLQGERKQAAQNKSLGRFDLADIPPAPRGMPQIEVTFDIDANGILHVSAKDKATGKQQSIVIKANSGLSEEEIEQMVRDAEANAEEDRKFEELATARNQGDQLVHATRKMLTEAGDKASADDKTAIEKAIGELELAIKGDDKAEIEAKIAAVSQASTPLAQKMYAEQPQGAEGQPAADKDQAGDDVVDAEFEEVKDNK
complement(339121..339684)         PHAGE_Escher_500465_1_NC_049342: tail assembly protein; HU825_01700; phage(gi100053)     1.78e-19            PseudomonasphenolilyticaMADEQNLENQTFDEQDQAAASDDLAARVQSLEEQLAAAQDQSLRVAAEMQNIRRRAEQDVEKAHKFALEKFAGDLLAVADSLERGLELSKPDDEAVKPVREGLELTLKLLLDTLARHQLTQIDPHGEPFNPEHHQAMAMEESTHAEPGSVLKVFQKGYLLNGRLLRPAMVVVSKAPSQAVPSIDEQA
339903..341576                     PHAGE_Escher_500465_1_NC_049342: putative single-stranded DNA binding protein; HU825_01705; phage(gi100050)     1.16e-150           PseudomonasphenolilyticaMLIHLSVHNYAIVEHLDLELKRGMSVISGETGAGKSIMLDALGLALGDRADSSVVRLGADKADILASFDLDDIPDARTWLAERDLDNDGPCILRRVITAEGRSRGYINGAPCPQGDLKALGELLIDIHSQHEHQSLLKPDTHRRLLDEYSAGQELARQVQLAAQRWRQTQQALERLSNSSDEQRARQQLLSYQLEELENLALAEGELEQLEQEHKNLANAGQLLDACRQVTELCSESDAGNVLSALTSSLQRLAAFQNQAGALGEAVNLLASAQIQVEEAVGELNRFVDHFDADPQRQQALEERLDTIYTLARKHRVQPVDLVALQQRLLDELEGLNADDEAIERLSEELAAYARHYEEKATELSRIRQAAAGELSLAVEAEIQRLGMPGGRFSVTLKPVAEGDYPPYGFEQVEFLVSANPGQPLRPLAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRRLGERGQVLTVTHLPQVAAQGHHHLFVHKARDNEQTRTAVAELRGRDRIEEIARMLGGVDITEQSLAHAQQMVTAAQA
complement(341642..342046)         ferric iron uptake transcriptional regulator; HU825_01710                            N/A                 PseudomonasphenolilyticaMVENNELRKVGLKVTLPRVKILQMLDTADQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDSGEVIEFFDQEIEKLQKEIVKRHGYELVDHNLVLYVRKKD
342143..342664                     PHAGE_Escher_500465_1_NC_049342: recombination protein; HU825_01715; phage(gi100049)     1.58e-15            PseudomonasphenolilyticaMQNTKLMLTSLTLVGLFAIAGCSFPGVYKVDIQQGNVVTQDMIDQLRPGMTRKQVRFIMGNPLITDTFHANRWDYLYSIQPGGSVRQQERVSLVFDGSDQLVGLAGDFMPGVSRDEAILGTSSTTTQTPAERDNKPQQTQEKPAPGSLLEQIQREVDAAEPVPVPIPEPLDVE
complement(342695..343027)         PHAGE_Escher_500465_1_NC_049342: exonuclease; HU825_01720; phage(gi100048)           1.74e-20            PseudomonasphenolilyticaMDKPVVAIEVVYALADKQKLLRLTVPAGTTVRDAALGSGMEAFFPGLDLANAPLGIFGKAVAKPDERVLEDGERVEIYRPLIADPKEVRKQRAARAAKSKSDDAETEMKE
complement(343020..343454)         PHAGE_Escher_500465_1_NC_049342: primase; HU825_01725; phage(gi100047)               1.84e-40            PseudomonasphenolilyticaMTTHIQRSALLPYPAGALFDMVNDVASYPQFLPWCSATEVLASSATQMHASMTVAKAGLSQKFMTRNELQAGKRIEMTLEEGPFSHLHGIWEFKALGEKACKISLDLTFDYAGPLVKATLGPLFNQAANTLVDAFCERAKQLYG
343653..344135                     PHAGE_Escher_500465_1_NC_049342: HNH endonuclease; HU825_01730; phage(gi100046)      1.50e-62            PseudomonasphenolilyticaMAKQKKQSPGTIALNKKALHDYFIEQKFEAGLVLAGWEVKSMRAGKAQLVDSYVLLKDGEAWLMGAHITPLTSASTHVIADPTRTRKLLLNKRELGKLFGAVQQKGYACVALSLYWKRHMIKCEIALAKGKKEFDKRHTEKERDSDREIQRAMRTKGKDD
complement(344187..344978)         PHAGE_Strept_TG1_NC_018853: putative regulator, GntR family; HU825_01735; phage(gi410491962)     1.64e-05            PseudomonasphenolilyticaMEVGVVRQRRLADDIVAQLETMILEGTLKAGERLPAERALAEQFGVSRPSLREAIQKLAAKGLLISRHGGGNFVAESLGSTFSDPLLHLLENNRDAQRDLLEFRHTLEGSCAYYAALRATEVDQQRLTEAFMALQDCYDREGTVTRAEEGAADAQFHLAIAEASHNAVLLHTIRGLFDLLKRNVVTNIGGMYALRDETRDMLLRQHRELYEAIMARRASEAREVIHRHINYVQEVLAEGQQEAQRLARAQRRHGDRSVIGHKA
345262..346956                     L-lactate permease; HU825_01740                                                      N/A                 PseudomonasphenolilyticaMSNGLLAFLAFSPILLAAVLLIGLRWPAKRAMPLVYLLTAGIALYVWDMSFNRVLASTVQGLVITAGVLWIIFGAILLLNTLKHSGGITAIRAGFTTISPDRRIQAIIIAWLFGCFIEGASGFGTPAAIAAPLLVAIGFPALAAVILGMLVQSTPVSFGAVGTPIIIGINGGLDTATLGTQLTAQGSSWAAFLQLITSEVAILHALTGTIMPLIMVLMLTRFFGKEKSWKAGFEVLPFAIFGGLAFTVPYVATGLFLGPEFPSLLGGLIGLAIVTSAARVGFLVPKKSWDFADAKDWPSEWLGSIEMKLEDLTAKPMSTFRAWLPYVLVGALLVISRTIPEVGAFMKSIVLVFPDILGEAGIKADFMPLYLPGGILVAVVLATFFLHGMKVRELAAAVGESSKVLVGAGFVLLFTVPMVRILINSGVNTAELASMPITMARYVADSVGSVYPLLAPSIGALGAFIAGSNTVSNMMLSQFQFGVAQNLGISGALIVAAQAVGAAAGNMVAIHNVVAASATVGLLGREGTTLRKTVWPTLYYVLVSGLLTLIAIYVVGVTDPLVGV
347053..347874                     (Fe-S)-binding protein; HU825_01745                                                  N/A                 PseudomonasphenolilyticaMSELFYNAAPNATRVAPPLPKPREYPAKPTQVYLFGTCVVDLFYPEAGLDAIRLLEREGLTVHYPQGQTCCGQPAYTTGYTDEARKVARAQLALFANDWPVVVPSGSCAGMLRHHYLELFKDEPETLKNAQALAERTFELAEFLLNVCQVEFKDAGTPTKVALHTSCSARREMNTHLHGRALLAQLGQVERVEHDHESECCGFGGTFSVRMPDISGAMVLDKTRALKESGAHQVVSADCGCLMNINGSLEKQREALRGQHLASFLWQRTGGAR
347871..349331                     iron-sulfur cluster-binding protein; HU825_01750                                     N/A                 PseudomonasphenolilyticaMNAEQRIPAIQIENAGDPDFRARARKSLKDEQLRRNFRTAMDSLMTKRAAAFSDADERERLREMGNHIRARALSKLPELLERLETNLTRNGVHVHWAETVDEANNIVLEIARAHEARQVIKGKSMVSEEMEMNHFLEGHGIECLESDMGEYIVQLDHEKPSHIIMPAIHKNAGQVASLFHEKLGVEYTKDVDQLIQIGRRTLRQKFFEADIGVSGVNFAVAETGTLLLVENEGNGRMSTTVPPVHIAVTGIEKVVENLRDVVPLLSLLTRSALGQPITTYVNMISGPRKAHELDGPQEVHLILLDNGRSQAFADSELRQTLNCIRCGACMNHCPVYTRVGGHTYGEVYPGPIGKIITPHMVGLDKVPDHPSASSLCGACGEVCPVKIPIPSILRRLREENVKAPDDPHKVMRGQGSKYSKQERLIWAGWRLLNTSPTLYRVFGFFATRLRGLTPSNIGPWTQNHSAPKPAARSLHELAKEHLEGKR
349328..349999                     lactate utilization protein; HU825_01755                                             N/A                 PseudomonasphenolilyticaMSAKANILAKLKKSLEGTTPIVDDYDESLVTQPWSYAPGQRIARLRQLMEAVHTEIHLTTDAGWPALLEQLLHDRQLPSLLIAPTTPYGQRFTAHCAGREGLPALKAYDRPVEEWKEELFNDTPASLTGTLGAIASTGSLIMWPTREEPRLMSLVPPVHFAILKASEIHDNFYEIQQKFQWAAGMPTNALLVSGPSKTADIEQVLAYGAHGPKDLIVLILEDA
349996..352845                     FAD-binding oxidoreductase; HU825_01760                                              N/A                 PseudomonasphenolilyticaMNAALPLERTPLPAAFLAEVERLIPAERRFDDPLSTLAFGTDASFYRLIPKLVVRVESEAEVVALLKLAHAENVPVTFRAAGTSLSGQAISDSVLIVLGDNWNGREIRNGGEQIRLQPGVIGANANAVLAPFQRKIGPDPASINAAKIGGIVANNSSGMCCGTAQNSYKTLAGLRVVLADGTVVDSEDAASVAAFRQSHAALLEQLAELGRETRANTELAAKIRHKYRLKNTTGFSLNALVDYDEPLDILNHLMVGSEGTLGFISAVTYDTVPDHPHKASALVVFPDVETCCLAVPVLKQQPVSAVELLDRRSLRSVEHKAGMPEWVKELSPTACALLIESRAASQSLLHEQINLIMTSIAHFPVEKQVDFSEDPVVYNQLWKIRKDTFPAVGAVRQTGTTVIIEDVTFPVERLAEGVNRLIELLDKHRYDEAILFGHALEGNLHFVFTQGFDDPAQVARYEAFMGEVAQLVAVEFGGALKAEHGTGRNMAPFVELEWGSEAYALMWKIKRLLDPAGILNPDVVLSEDPDIHLKNLKPLPAADEIVDKCIECGFCEPVCPSNGLTLTPRQRIVIWRDIQARKRAGVDTTEIERLYHYHGVETCAATGLCAQRCPVGINTGDLVRKLRGREANRTGTANWLADHFSTAVQGTRFMLHVANGAHLVMGTKNLAKLSATMTNASKGRVPQWTPATPQPLQRLHLPKPPTGDERPRVVYLAACVSRAMGPAARDQEQEPLLDKTRSLLEKAGYQVIFPDELNDLCCGQPFASKGYAEQGERKRQEMLDALLKASRGGLDPIYCDTSPCTLRLVQGLTDQRLDMYDPVRFIRTHLLDKLDFVPQDKPIAVHVTCSTQHLGEAQALIDIARRCANEVVIPEGIHCCGFAGDKGFTTPELNEHALRSLKNAVQICEEGISTSRTCEIGLSRHGEIDYHGLVYLVDRVTRRKAATPA
353026..353331                     hypothetical protein; HU825_01765                                                    N/A                 PseudomonasphenolilyticaMKIHALLASAVLLASPAVFAAQDLCQTNLQEIEDNMATQSTTLGEPAKSQVEEHVMQAKQAQQAGDTEGCIAHSTKALQELKGPGSSGSGGSSGSGSGAGN
353464..353842                     tRNA                                                                                 N/A                 GGGGCCGATTAGGATTCGACGCCGGTAACGAAACTTGAGGGGCATGCCGAGTTGGTAACAGAACTCGTAAATAAACTGTTGCAAACCTATAGTTGCCAACGACGACAACTACGAAGGGTACGCGCTAGCCGCCTAACCTTCATCTGGTCGCTTCGGCGCCAGCGGTCACTAGGGGATGCCTGTAAACCCGAAATGACCGTCAGACAGAACAGGATCGCCGCCAAGTTCGCTGTAGACGTAACGGCTAAAACTCATACAGCTCGCTCCAAGCACCCTGCCAATCGGGCGGCGCGGAGTTAACTCAGTAGATTTGGCTAAGCATGTAGAACCGATAGCGGAGAGCTGGCGGACGGGGGTTCAAATCCCCCCGGCTCCACCA
353734..353746                     attR                                                                                 N/A                 CACCCTGCCAATC
complement(353882..354910)         PHAGE_Erwini_EtG_NC_047833: holin; HU825_01775; phage(gi100034)                      1.77e-97            PseudomonasphenolilyticaMTVKKRPDGRWLADVQPIRGQRFRKLFTTKAEAQRYEQYIIANKAADAAWNPKAKDRRRLSELVGLWFDLHGHMLKDGERRKAKLDALCVRLRDPIAIKLDPATYAHERRLRAEAGITPKTLNNELGYIRAVFNELRGLGQIDYANPLELMKPYRIEEQELSWLTQEQIAELLTAIREGCDNPHVEPIVLLCLATGARWSEAEGLTPSRLRNGAVTYSKTKSSKVRTVPIPAELEAFIRDHWRRHGQFTGAITSFRRALSRSGIVLPKGQASHALRHTFASHFMQKGGNILTLQKILGHSSLAMTMRYAHLAPEHLAEAVKLSPLAGVTLSGQSKPLKTQNP

#### region 2 ####
2492067..2492492                   phage holin family protein; HU825_11995                                              N/A                 PseudomonasphenolilyticaMNEQRNLNTPYEPLHTEQDTSVGGLLRQLTREVPSLFTKELALAKAELSESLRATKAGAASVATGGAVLLAGFIILLLAAVYFLATMMEPYLAALIVGGVVVVIGLIMVSAGKKKFEASSLKPDRTLHSIQKDKEAVRGHA
2492492..2493256                   DUF3618 domain-containing protein; HU825_12000                                       N/A                 PseudomonasphenolilyticaMSTHNQIDVEAQKDPDTLEREIDQQRAEIGNIVHALESKLSPGQMIDTALGYAKGGGGEFLHNLSDTLKANPVPTVLTSVGLLWLMAGQNRRPDYQAASGPSATDKLAAKASNLKQQGVGMKDRASQLGHSVSHSLGDARSRVGESGRHAADSLKHTAARARGGFSQLLDEQPLAVGAMGIALGALLAATMPPTRREDELMGETSDRLTGKLRDKARAGYAQASEMGREVADEVVGKVKQDIHHDPSRPASGPH
2493324..2493399                   tRNA                                                                                 N/A                 GCCGGTGTAGCTCAGTAGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGCAGGTTCGACTCCTGTCTCCGGCACCA
2493354..2493386                   attL                                                                                 N/A                 ATTCGTAATGCGAAGGTCGCAGGTTCGACTCCT
complement(2493475..2494071)       PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; HU825_12010; phage(gi526003651)     1.38e-10            PseudomonasphenolilyticaMLDKYGVGQDPLCYPGTTVLRNRLDLTDDQALHDAERTLSEIAAGSIDFALPPYDLTYLQRIHRTLFEDVYEWAGELRTVDISKGGTHFCNVTRIGPEATKLFRQLEAANWYEGMSRQQLVSAVAELYGDLNMVHPFREGNGRAQRILFDHIIVNAGYEISWWQVDEGEWIQANIDAVTCDYQAMTNIFQRCIGQAIR
complement(2494071..2494241)       DUF2559 family protein; HU825_12015                                                  N/A                 PseudomonasphenolilyticaMPDLTLEEKKAYYAKVRQSNYAASLRLEGFDTTPADAKRKLPTREAALRALRARQA
complement(2494292..2495290)       PHAGE_Aeromo_phiO18P_NC_009542: integrase; HU825_12020; phage(gi148727179)           3.95e-88            PseudomonasphenolilyticaMITKGPTGWDVDFWLDRTAGIRKRKRGFRTKSEAERWVVDMRREYSHRGRDPGERLADLVQVWYELHGATLKDQKRYGRTLAIVEALGNPIASSFTALDFSRYRAERLKSCTPATVNHEHRYLKAVFNELIRLGVWHEANPVAKLRQLRVDETELTYLTLDECRLVLDECAASTNSHTLPVAKLCLATGARWDEAESITRSQLLNGQVRFARTKNGRVRTIPVPDDLVELMLERGYPGSGRLFSSCRSAFRKAYERTGLHTPGQLTHILRHTFASHYMMQGGNILTLQRILGHGDIKMTMRYSHLAPDHFATVLSHSPLALLGQKDRQDAAN
complement(2495287..2496567)       PHAGE_Pseudo_Pf1_NC_001331: hypothetical protein; HU825_12025; phage(gi9625374)      1.14e-165           PseudomonasphenolilyticaMQVKDFIRVDRTTGEESSNGRLFLDIGYTGFKDLTGVRLLRCGVDTVRQLYRGLIRPEIMALFEKPGAMVEFAGEIWHSGRVGRDSGYQYKLQNADLGFILLIKNFNAKLEHIGPHLKIEVSPHAIDALSPERLQERMDYYPAAVMTNRERNQCAVHLALDLQGWKPPVDLVARLHCRARTHRDISGISQVEWATKSSVYGRGETSMFGSAGGVQLCIYNKTEQARATDKLDFWESVWRRRDSFDAADPDNYDPTQDVWRVELRYHHSVIQQFASGSIDVKTGEAIDTDSFAAFSAHLDGLWRYGLRQFKLIARPGYYEPIWTLMRDDVRVDVAVDSLVDDTEYKRYYKTSRGFSGKNVELFLGNFVSLLARERVGAKKAFETLQQWDCWPVIRDHYAAKEMTERDLYKHIKALLEERHVRWGRAV
complement(2496635..2496937)       hypothetical protein; HU825_12030                                                    N/A                 PseudomonasphenolilyticaMTRAAPLVLLVLARRAYLCLPHLLLGLASLVLCIALAGTPPPDRSYLPPFTQDQPCLDDPIEFFIDAVTAWQLMSARTAAQFYAERSERVACAGVRAPPR
complement(2497025..2497414)       hypothetical protein; HU825_12035                                                    N/A                 PseudomonasphenolilyticaMTSQHAVVDASTAQDFIGQTVLVELHWDDEPESYWQCLHIVGMVVPMEGVYDHGYFLTFDMNRDAPYPNEVFFSDIRTIRVMRHRDRHSSGNVLGRIALPNSARSRAALPARRNSFTVPANGSTGAAHP
complement(2497407..2497616)       PHAGE_Pseudo_Pf1_NC_001331: hypothetical protein; HU825_12040; phage(gi9625376)      3.40e-08            PseudomonasphenolilyticaMGAAISNLCSIVTFASASGIPVEEVTEWVENGTLPSVTFSDFRMVNVGKLRADLLSGKESFAAGDYSHD
complement(2497654..2497842)       PHAGE_Pseudo_Pf1_NC_001331: hypothetical protein; HU825_12045; phage(gi9625376)      2.77e-16            PseudomonasphenolilyticaMCSKEVYGAMLGVSVDTVIAWMQSGTIPSVKMGRPRVVNLAQIRTDLAKGKTIFAQGDYTDE
2501267..2501299                   attR                                                                                 N/A                 ATTCGTAATGCGAAGGTCGCAGGTTCGACTCCT
