gi|00000000|ref|CP064709.1|  Salmonella enterica subsp. enterica serovar Typhimurium strain 4638880, gc%: 52.05%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1120540..1120551                   attL                                                                                 N/A                 TCGATAAAGCGT
complement(1120707..1121920)       PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; IT784_05405; phage(gi16130540)     1.02e-64            SalmonellaentericasubspentericaserovarTyphimuriumVARTTRPLTNTEVLRAKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMMVVLSLLFHLLTPEGLRADYLALLANGIDPQIQAEVAEEQQQIALDSIFSTVAANWFQLKSKSVTPDYAKDIWRSLEKDVFPAIGEIPVQQIKARTLVAALEPIKARGALETVRRLVQRINEIMIYAVNTGLIAANPASGIGMALRNPKSKTCRRCDQKNCLSCVRSCQIYLFRLAALNGNSLRSLAPQRLPALDGQKSTLIQNSGRFQPNERLSESTSYLCLLRHTFQRNLLVRIVSMSSQAEMTLNNQIARLLMQLNELAIVENWLLMGGQRAQRMKQDLIQMLSNHLLHIWIKMKLGELTIELRIIRKLNLWLGGVKFTLLQLLLRKIHGA
complement(1122105..1122466)       tRNA                                                                                 N/A                 GGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAATAGTCGCAAACGACGAAACCTACGCTTTAGCAGCTTAATAACCTGCTTAGAGCCCTCTCTCCCTAGCCTCCGCTCTTAGGACGGGGATCAAGAGAGGTCAAACCCAAAAGAGATCGCGCGGATGCCCTGCCTGGGGTTGAAGCGTTAAAACGAATCAGGCTAGTCTGGTAGTGGCGTGTCCGTCCGCAGGTGCCAGGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCA
complement(1122538..1123701)       HlyD family type I secretion periplasmic adaptor subunit; IT784_05415                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDDFDIQRERAFSGASRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVSDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
complement(1123709..1125889)       PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; IT784_05420; phage(gi9630145)        6.94e-25            SalmonellaentericasubspentericaserovarTyphimuriumMTRAAPDVEEVLSERALSQWAQAISYVASHYRIACSPGSIQANAPWFRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRDGQLLVIEHVNGEDAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMVVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVIVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA
complement(1125886..1127295)       TolC family outer membrane protein; IT784_05425                                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAVGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNNKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP
complement(1127360..1138834)       PHAGE_Acinet_vB_AbaM_ME3_NC_041884: hypothetical protein; IT784_05430; phage(gi100051)     1.76e-09            SalmonellaentericasubspentericaserovarTyphimuriumMRLLAVVSKLTGVSTTVESSAVTLNAPSIVKLSVAREEISQLTRINQDLVVRLHSGETITIKNFYVTNDLGASQLVLAENDGTLWWVENPQAGLHFEQIADINELLVTSGASHEAGGAVWPWVLAGAVAAGGIAAIASSGGGDSHHHSDGDNPPPDNTNPDGNPPDNSNPGGSTPNGNTPGSSNPVDTTPPLAPGELLISADGKTVSGQAEAGSTITIKDPSGNVVGEGKADSDGKFSIDLTAPQISGEQLTVTATDDAGNTGPSATIDAPNIPLPDTPVITAAIDDAAPLTGTLSNNQFTNDSTPTLEGTGSAGTVIHIYANGQEIGSTTVDTSGNWRFAITSALADGENHFTAIATNVKGESSESARFTLTIDTLSPDAPRVELIADNTGLLTGPLQNNDRTDEAKPLFSGQGEAGNTITIKEGSTVIGSATVDENGRWTFTPTTPLSDGEHTFTVEQSDKAGNTSRVTTTPTIIVDTTPPDAAIIDNVAKDGTTVSGTAEAGSTVSIYDPAGNYLGSTITGENNHFSITLNPAQTHGERLEARIQDAVGNIGPATEFTASDSQYPAQPTILTVTDDAGAVTGLLKNGDATDDNRPTLSGTAEPGSTISINDNGFPVATFPPIVADADGKWSFTPSLALADGDHVFTATATNDRGTSGQSVSFTINIDTQPPVLEGLAVSDVGDRLTGTTEAGSTVVIKDSLGNTLGSGTAGDDGTFSIGISPAKINGETLSISVTDKAANSGPVETLNAPDKTAPAAPNGLIVATDGLSVSGQAEAGATVTIRDSSNTVLGSAVANGNGQFIVPLNTAQTNGQALIATATDVAKNESAAATVIAPDSTAPEMPKNVVISEDGTSISGTAEPGSAITIATPDGTPLGSGKADGEGHFTLPLVPAQTNGEQVTVTATDSANNVSPPTTAQAPDITAPDKPIITQVLDDVESFTGPLVNGQTTNDNRPTLSGTAEAGARVEIFDNGVSLGLATLQPNGTWTFTPSQNLGEGAHRLTVIATDAKGNASPAASFDLVVDTQSPQQPVITFITDDAPGILGSVAHLGLTNDSTPTINGTGEPGSTVHLYQNGARIADIIVGNSGVWNYAYTTASPLADDTYTFTVTASDSNGNTTPFSTDFTITIDTQAPAAPGVIGVTDGDGNTIDTNQITQESQPRLSGSGTAGDTIILYDNGNAIGQALVGTDGRWQFTPPAALGDGDHLLTARANDPAGNESPESLSFTLRVDTQAPDAPQIVSAAITGGEGEVLLANGSITNQRMPTLSGTGEPGAIITLYNNGVELATVQVNPQGSWTYPLTRNLSEGLNILTATATDAAGNSSPTSSVFSVTLDTQPPAQPDAPLISDNVAPVIGNIGNNGATNDTTPTFSGTGEIGSTIILYNNGSEIGRTTVGDNGSWNFTPAALTPETYTITVTETDIAGNISPPSASVTFTLDTTAPANPVITFAEDNVGEVQDTIVSGATTDDNTPVIHGTGDIGSVITLYNGSSVVGVVTVDETGTWTLPVTSALPDGIYTLTAIAADAAGNSSGVSNSFTFTVDTVPLQPPVVNEILDDVAPMTGPLTDGAFTNDRTLTINGSGENGSTVTIYDNGVAIGTALVTDGGWTFNTPELSEASHALTFSATDDAGNTTAQTQPITITVDITAPPAPTIQTVDDDGTRVAGLADPYATVEIHHADGTLVGSAVANGTGEFVVTLSPAQTDGGTLTAIAIDRAGNNGPATNFPASDSGLPAVPAITAIEDDVGSVQGNIAAGGATDDTTPTLRGTTDIGSTVEVFIDGDSAGFATVDASGNWIFEIATPLSESTHYFTVQATNANGPGGLSAPVGITVDLSAPAQPVITSATDDVPGMTGTLDNGALTNDSRPTLNGTGEAGATIRILDNGVEIGSATVDQSGNWRFTPNAPLESNAHIFTAVATDPAGNSGQPSDGFTLNIDAQAPDVPVITSVIDDNNQPTVPVLPGQSTDDRQPILNGTGEPGATITIFDNGTPLGTAQVGENGSWTFPVPRNLSEGSHNLTVSATDPAGNTSAVSAPWTIVVDITPPAIPVLTSVVDDQPGVTGNLVSGQLTNDATPTLNGRGEAGATINVYLDGNSASIGTTTVNSDGTWSFTPQTPLANGSHTFTLSATDPAGNSSAVSSGFVLTIDATPPAAPVIASVADNTAPVTGIVPNGGSTNETRPTLSGTGEAGTTISIYNGSALVGTAQVQANGSWSFTPSTSLGAGVWNLTATATDAAGNTSAASEIRSFTIDTTAPAAPVIDTVYDGTGPITGNLSSGQITDEARPVISGTREANTTIRLYDNGTLLAEIPADNSNSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVNFVVDTTPPLTPVITSVSDDQAPGLGTIANGQNTNDPTPTFSGTAEAGATITLYENGTVIGTTTAQPDGAWSVATSTLASGTHVITAVATDAAGNSSPNSTAFTLTVDTTAPQTPILTSVVDDVAGGVTGNLANGQITNDNRPTLNGTAEAGSVVSIYDGNTLLGVTSANAGGAWSFTPTTGLNDGTRTLTVTATDPAGNVSPATSGFTNVVDTLAPTVPLITSIVDDVPNNTGAIGNGQSTNDTQPTLNGTAEANSAVSIFDNGALVATVNANASGNWSWTPTAALGQGSHAYSVSAADAAGNVSAASPSTTIIVDTIAPGAPGNLVINATGNRVTGTAEAGSTVTITSETGVVLGTATADGTGSFTATLTPAQTNGQPLLAFAQDKAGNTGIAAGFTAPDTRVPEAPIITNVVDDVGIYTGAIANGQVTNDAQPTLNGTAQAGATVSIYNNGALLGTTTANASGNWSFTPTGNLTEGSHAFTATATNANGTGSVSTAATVIVDTLAPGTPSGTLSADGGSLSGQAEANSTVTVTLAGGVTLTTTAGSNGAWSLTLPTKQIEGQLINVTATDAAGNASGTLGITAPILPLAARDNITSIDLTSTAVTSTQNYSDYGLLLVGALGNVASVLGNDTAQVEFTIAEGGTGDVTIDAAATGIVLSLLSTQEIVVQRYDTSLGAWTTIVNTAVGDFANLLTLTGSGVTLNLSGLGEGQYRVLTYNTSLLATGSYTSLDVDVHQTSAGIISGPTISTGNVMADDTAPTGTTVTAITNANGVSTPVGAGGVDIQGQYGTLHINQDGSYTYTLTKPTAGYGHKESFTYTITQNGVGSSAAQLVINLGPAPVPGSVIATDNNASLVFDTHVSYVNNGPSTQSGVTVLSVGLGNVLNANLLDDMTNPIIFNVEEGATRTMTLQGTVGGVSLVSTFDLYVYRFNDAIQQYEQFRVQKGWINTLLLAGQSQPLTLTLPGGEYLFVLNTASGISVLTGYTLAISQDHTYAVDSITANTTGNVLTNDVAPTDALLTEVNGVAIAATGTTEVNGLYGSLIIDARGNYTYTLKNGVGADSIKTPDSFIYTVKAPNGDTDTASLNITPTARALDAINDVSDTLSVATLQDTSAWLDSSVGSASWGLLGKSGSGSGTFDVATGTVLKGASLVFDVSTLITLGNLNISWAIQENGTVIRNGTVPVANITLGSATVTVNLSGLELDAGTYTLNFTGTNTLAGAATITPRVIGTTVDLDNFETSGTHTVLGNIFDGSDAAGAMDQLNTVNTRLSISGYNGSAATLDAAANTTSATIQGHYGTLQINLDGAYTYTLNNGVAMSSITSKEVFTYQLDDKMGHTDSATLTIDMAPQIVSTNQNDVLIGSAYGDTLIYHLLNGADATGGNGADRWQNFSTAQGDKIDIHELLTGWDHQAATLGNFVQVHTSGANTVISVDRDGVGSAFKSTDLVTLENVQLTLNDLLQNNHLITGG
complement(1139450..1139932)       PHAGE_Escher_500465_1_NC_049342: HNH endonuclease; IT784_05435; phage(gi100046)      1.78e-110           SalmonellaentericasubspentericaserovarTyphimuriumMTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR
1140082..1140558                   PHAGE_Escher_500465_1_NC_049342: primase; IT784_05440; phage(gi100047)               1.99e-102           SalmonellaentericasubspentericaserovarTyphimuriumMVLFTRFMLMGIAMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCVGSRVLESSPAQMTAAVDVSKAGISKTFTTRNQLTRNQSILMHLVDGPFKKLIGGWKFTPLSPEACRIEFQLDFEFTNKLIELAFGRIFKELASNMVQAFTVRAKEVYRAG
1140548..1140838                   PHAGE_Escher_500465_1_NC_049342: exonuclease; IT784_05445; phage(gi100048)           7.89e-55            SalmonellaentericasubspentericaserovarTyphimuriumMPDKLVVEVAYALPEKQYLQRVTLEEGATVEEAIRASGLLELRTDIDLAKNKVGIYSRPVKLTDTVQDGDRVEIYRPLIADPKALRRQRAEKSAGR
complement(1141004..1141342)       PHAGE_Escher_500465_1_NC_049342: recombination protein; IT784_05450; phage(gi100049)     1.88e-73            SalmonellaentericasubspentericaserovarTyphimuriumMRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQPGHENVTQQTLTLTFNSSGVLTNIDNKPALTK
complement(1141491..1143152)       PHAGE_Escher_500465_1_NC_049342: putative single-stranded DNA binding protein; IT784_05455; phage(gi100050)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGATRADLCARFALKDTPAALRWLEENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLDSYANEAALAQQMAARYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDVNLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPEALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALETAQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFDEHHLSNDGADRVEFKVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA
complement(1143238..1144116)       PHAGE_Escher_500465_1_NC_049342: hypothetical protein; IT784_05460; phage(gi100051)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMNNHFKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLTDLDPDNALQQLSDVLEGRYISEKRFLLEAQVCQQDRQKRISTAINEVVLHPGKVAHMIEFEVYIDETFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRSDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF
1144239..1144829                   PHAGE_Escher_500465_1_NC_049342: tail assembly protein; IT784_05465; phage(gi100053)     1.76e-53            SalmonellaentericasubspentericaserovarTyphimuriumMSSKEQKTPEGQAPEEIIMDQHEEVEAVEPNDSAEQVDPRDEKIANLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDIEKAHKFALEKFVNELLPVIDSLDRALEVADKANPDMAAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESEEVPAGNVLGIMQKGYTLNGRTIRAAMVTVAKAK
complement(1144864..1145469)       cytoplasmic protein; IT784_05470                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMYDDYVVEWDLAFAEYLKKLASIFLKETPDLWPNIVSRLASDPASFEDDEDDDYGMVEVLDCSGGDLDNRALLQAFMQVLRTEGVIEEIDYKGEGEEGLLATFAANRYYDLTKDFASTDELKTRLLALTRYDEIGKVCKEGDRYVDEIFERIQSQLNERGFQIASLNESTDAYNIFVLPMDEYEQIADFDTPWLEVQDFLS
complement(1145599..1146885)       PHAGE_Escher_500465_1_NC_049342: minor tail protein; IT784_05475; phage(gi100055)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMRLMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVREAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQVKVVPVKPLRESILE
complement(1146905..1147696)       PHAGE_Escher_500465_1_NC_049342: minor tail protein; IT784_05480; phage(gi100056)     4.09e-172           SalmonellaentericasubspentericaserovarTyphimuriumMPVFALLALVAYSFSLALIVPGLLQKNSGWRRMAILSAVIALVCHAVALESRILPGGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLAFATFMPNEYITHLEATPGMMVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFSNEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSTENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAGILTLAYFGSRILQQFVS
1147862..1149223                   PHAGE_Escher_500465_1_NC_049342: tail length tape-measure protein; IT784_05485; phage(gi100057)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRSELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASIKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLEQLKQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAQGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
1154941..1154952                   attR                                                                                 N/A                 TCGATAAAGCGT

#### region 2 ####
1923785..1923796                   attL                                                                                 N/A                 TGTTTTGTGTGA
complement(1937052..1937750)       PHAGE_Yersin_fHe_Yen9_04_NC_042116: L shaped tail fiber protein; IT784_09220; phage(gi100273)     5.89e-18            SalmonellaentericasubspentericaserovarTyphimuriumMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQADEQRSNGTPQ
complement(1937774..1938430)       carbon-nitrogen hydrolase family protein; IT784_09225                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(1938538..1938768)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; IT784_09230; phage(gi422936677)     1.18e-22            SalmonellaentericasubspentericaserovarTyphimuriumMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
1938906..1939280                   CopC domain-containing protein YobA; IT784_09235                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
1939281..1940156                   copper homeostasis membrane protein CopD; IT784_09240                                N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMMLTFVWITLRFIHFASLMLVYGCALYGAWLAPASIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLVVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVAYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
1940173..1940526                   PHAGE_Salmon_SEN1_NC_029003: hypothetical protein; IT784_09245; phage(gi971764937)     1.42e-11            SalmonellaentericasubspentericaserovarTyphimuriumMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDSSNN
complement(1940891..1941970)       PHAGE_Entero_HK022_NC_002166: integrase; IT784_09250; phage(gi9634144)               4.15e-90            SalmonellaentericasubspentericaserovarTyphimuriumMSRKKYDANLPRNLTYRKASKSFFWRNPVTDKEFPLGQIARRDAITQTIEANNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRGNQLVTVREKMGEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIVKNPVEATRIPEVKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKKFVKARKISGVKFSDNPPTFHEIRSLAGRLYKDERVEEFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(1942003..1943151)       PHAGE_Erwini_phiEt88_NC_015295: exodeoxyribonuclease; IT784_09255; phage(gi327198600)     2.26e-51            SalmonellaentericasubspentericaserovarTyphimuriumNPDLRRTWCESFVAVHGVRDPDWYEYVPDNTPTTHEENAARLRQAGKCLRDIEAGRFQCDEEKPQPTGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAVRGEYAEDISDPNDPKWVPNNYSASNQGEKEEVVPEEKQLAAEPEAVTRNADGTFDVSALFPPPSNQTEKTEARTERDGETPKESNQQETAGDTGQEITTDGGSGTGGDEAGEAADPVENGNFTVPDDIQPGIYYDIPNEAYHAGPGVSKSQLDDIADTPAIYLWRKNAPVDTEKTKSLDTGTAFHCRVLEPEEFSKRFIIAPEFNRRTSAGKEEEKTFLEECARTGITVLTAEEGRKIELMYQSVMA
1943143..1943391                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; IT784_09260; phage(gi169257182)     1.07e-50            SalmonellaentericasubspentericaserovarTyphimuriumIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWFFVTKGCLKYSGDLVRVMQIINGGQNGIGDQRERFEKAKSVLV
1943388..1943921                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; IT784_09265; phage(gi16765210)     4.67e-122           SalmonellaentericasubspentericaserovarTyphimuriumMNLLSALLKRYWLQLVFILLMAGAFIVGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRY
complement(1944190..1944357)       lytic enzyme; IT784_09270                                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
complement(1944422..1944604)       hypothetical protein; IT784_09275                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNKKHTNHHLLKNDIKTESYNMMMHEKSKMRQIPRRCRPVAGRPAGSIFLKCEQLSTTTT
1944659..1945093                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; IT784_09280; phage(gi169257184)     1.28e-97            SalmonellaentericasubspentericaserovarTyphimuriumMDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQPAEHQDPNKMTAKERKGWFDSEKGRLWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWPDKLEKDKGWSADQLNEAQDVMDE
1945136..1945703                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; IT784_09285; phage(gi169257185)     2.02e-26            SalmonellaentericasubspentericaserovarTyphimuriumMTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPKQQRPRNVSWFIPENWLAVHNRFFFVGLQAGGADRLPFPRYRWRGRWFFPGIQTYHHLYVCGDDTGREFAWSGNHRCEMAAFFAARSPAHDRHSFSLPGRSPSVVLALSTLRRLVPARDGKHGGVT
1945702..1947039                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail fiber protein; Lambda gpN homolog; IT784_09290; phage(gi169257204)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGEVQTKASLDSPALTGTPTAPTPETTAAGIEIATAAFVAAKVAQLVGSAPEALDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSADGLIEYVGLRETINHAADALQKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILCLTGIGDGEILIGWRGVNGAPASAYIRSHRDTADAEWSEWAMFYTSLNPPPDSYPVGVAIAWTSDATPAGYALMQGQLFDKSAYPLLAIAYPSGIIPDMRGWTIKGKPTSGRAVLSQEMDGNKSHSHTARAQDTDLGTKTTSSFDCGTKLTNTMGNHTHQFGGYINSYRGDSNHTSFQPGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAETTVKNIAFNYNGGRMWSGPPGQRRPANEAGVGKFQ
1947011..1947331                   PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; IT784_09295; phage(gi966201575)     1.04e-54            SalmonellaentericasubspentericaserovarTyphimuriumMKLAWESFSNPPKVINWQYASARQNAVFSTTAYCPSKTLCPNARTEYIGFGDYRTYCKKSGNTCISPRHQVDDIYIGSHNHAVSLSPNFHGKHLKPEYLSGVKNDV
1947321..1947905                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail assembly protein; IT784_09300; phage(gi169257205)     7.64e-111           SalmonellaentericasubspentericaserovarTyphimuriumMTFKMSDTPQTIKIFNLRSDTNEFIGAGDAYIPPHTGLSANCTDIAPPDIPSSHIAVFDAETQTWSLQEDHRGETVYDTTTGNQVYISEPGPLPENVTSVSPVGEYQKWDGKAKVWVKDEAAEKAAQLRQAEETKNRLLQIASEKIAPLQDAVDLDEATDKEKASLLAWRKYRVQVNRVDTLKPVWPEKPASSL
complement(1948002..1948202)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; IT784_09305; phage(gi169257211)     6.71e-41            SalmonellaentericasubspentericaserovarTyphimuriumMKHVKSVFLAMVLILPSSLYSALTIAADSQDHKKEETIKPMPQKWCNLWPAGIPFPGDWFKKCRGY
1948772..1948897                   arsenic transporter; IT784_09310                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFANADSELILTPIIIAVLLAPGFSKSTTLAILHFFFRREK
complement(1949411..1949557)       hypothetical protein; IT784_09315                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMAHWVLKQWPQLALDAISQITFQMDNKHSSYPVCIGFVKPDVDHLHQG
1949572..1949718                   PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; IT784_09320; phage(gi100036)      4.21e-17            SalmonellaentericasubspentericaserovarTyphimuriumIGGRRPKLTPEQWAQAGCLIRAGVPRQQVAIIYDVGLPTLYRKFPVLG
1961444..1961455                   attR                                                                                 N/A                 TGTTTTGTGTGA

#### region 3 ####
1953218..1953382                   PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; IT784_09345; phage(gi431811050)     8.05e-15            SalmonellaentericasubspentericaserovarTyphimuriumNAPRAGSAKLMDVLDHLNAKDGKGTLYFAGGMPQQWAMKREMLSPRYTTRYEDLL
1953392..1953920                   PROPHAGE_Escher_CFT073: transposase; IT784_09350; phage(gi26246249)                  2.05e-27            SalmonellaentericasubspentericaserovarTyphimuriumVQDILIACVDGLKGFPDAINSVFPQTYIQLCIIHIVRNCLKYVSWKDYKAATSGLRPDRRGGTDGDGCVRESPGRISANQQKLACAPGKPQYALQLSAGYPQGHLYDKRNRIPELRDPCRDETQGVPNGLSTKSYLSGNQGCVKKMEYADPELVAGDEPFYYRVRPPERSPLA
complement(1954066..1954206)       hypothetical protein; IT784_09355                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMFRSTRTLPRNLQTYTEQASTEELHTDLNNMQNTGVYSIQQMFLQF
complement(1954375..1954641)       PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; IT784_09360; phage(gi212499738)     4.56e-11            SalmonellaentericasubspentericaserovarTyphimuriumMKFDNAWNQGVWYALRSATGRPSPQPFSVENLPALGEKCRRIMKITSAVYTSKKTLSKRWFASAELLNLYLTKYGLSCLNCSRKKTTA
1955011..1955430                   GNAT family N-acetyltransferase; IT784_09365                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDIQITHQVTEFDKEELLAGLRSYNAQFVDFSKNGQLGVYCRNESGEMVGGLIADRKGPWLCIDYLWVSESARSNGLGSKLMEMAEKEGLRKGCVHGLVDTFSFQALSFYEKQGYILQMSLPNFPKVGSQRHYLIKPGL
complement(1955666..1956317)       glycosyltransferase; IT784_09370                                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumNMFLKKHYQAYCRMLISLSSLMVLTWRPIRKTLYHCKSLTWELRRKNDFLCRPYITGGSDFAFTGVRTTPQGTQRYRVSCRWLYEKRKSNLSAGAGISRTAKTTLSYGWRCNARDIQLLLVSRSGCYSLSIPGTVLHGCNSNGGRKACTDQYTRRDDVRKRGGYRLPFAGVNDPGDHCQGHSASIPFKRYYLTWTTLCGREIPVA
complement(1956570..1956989)       PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923: hypothetical protein; IT784_09375; phage(gi100013)     4.42e-05            SalmonellaentericasubspentericaserovarTyphimuriumMIANTAKAIEATKALVAAVPFLGGSASEKDYRDALALVDYLIENDDENPLIDFLASKIAEYEDNSKQFAEFNKSVAEMPVGVALLRTLIDQYKLSYSDLKEEIGSKSLVSQILSGQRSLTITHIKALSARFGVKSEWFL
complement(1956986..1957297)       PHAGE_Riemer_RAP44_NC_019490: DUF2136 superfamily protein; IT784_09380; phage(gi418489860)     1.22e-11            SalmonellaentericasubspentericaserovarTyphimuriumMHVISKEPFDEAARRYPNDSLAIKALYRLVREKDFSSPAELRTVIPSLDNFKYRNKWWVLDVGGNNLRVIAYINFINKRFYVKHIATHAEYDKLTRYYRENKE
1957476..1957775                   PHAGE_Cronob_ENT47670_NC_019927: phage holin; IT784_09385; phage(gi431810538)        1.55e-15            SalmonellaentericasubspentericaserovarTyphimuriumMKLPELNWPWVAYFWVGCIWLGSIAHSAFRVLVGDDVTVIGVILQLIVASFAGLLAILIAIRFNWSAETAGIVCSIAGWAGGRFVQAVEHKVMMMIAKK
1958117..1958674                   hypothetical protein; IT784_09390                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMATEITSIAVQFPWAALITAIAGLSGALGGAFLANKFAENRWYKQVSFEKEKERIAMLREKGEELHILVSKWGKATINYQLYQLRVIKGVLTEDQLHSLAAELSTGGDVHDRMDALLYLYFPSLDKFMKEVREHLSEGHKIYHAVINGALDRDKGLTIFDKEATNVEAAIEKIKMGIRNVLQNFN
1958947..1959405                   PHAGE_Salmon_118970_sal3_NC_031940: D14 protein; IT784_09395; phage(gi100133)        7.54e-09            SalmonellaentericasubspentericaserovarTyphimuriumMQVDTDFISLDTLVATQQAAKWAGVAAIAACISCFATIVGIGVAWRSLHQWKPQYKENSRLQLIDTLVAYQQCLISLPKDLSNDPECKHRKEFLKASIEVDMRGVIYLKQHNNSELKEELENLRIKGAQFVAGKVSKPELALISSIIMLIEL
complement(1959821..1960297)       hypothetical protein; IT784_09400                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSTDEISYQILYRYYLEKLYSTLTRRVDNVLSFALVFLGVGVTINVGSPFILGPGIVGIAILKRVLRFGTRSAQADRQSRAWLKLFNTQHRFPSDKTLFLAFTSLEQDASEVWSMLIGPAILMTETALGKTPIEPLTAGEKLCAFLSGATKSQPADRN
complement(1960626..1961021)       PHAGE_Entero_lambda_NC_001416: putative envelope protein; IT784_09405; phage(gi19263396)     1.48e-19            SalmonellaentericasubspentericaserovarTyphimuriumMELQLMLNHFFERVRKDANFNAFLIDLEYNNIAYYIYFVATGNVKIITHAGHFISIKSNRKLIKVNSTPNTKLIKLTSAKHFSGEHSYEKYCTDLATAGVFKWIVELNQKTRQYWSKDNQLLYIENVVMPL

#### region 4 ####
complement(2760383..2761957)       PHAGE_Burkho_Bcep1_NC_005263: gp18; IT784_13470; phage(gi38638625)                   1.60e-22            SalmonellaentericasubspentericaserovarTyphimuriumMNTYAAGILFKSGGKIFLVKRGDDGSWAVPGGKLEEGETPEAAAKREVLEECGFDYSAPLTPHTLIDGYVTYLADDAEQFDAVLNDENQACGWFSPDELPEPLHPGMVAMLDAEPLNEKDVAGLIADGQLTSPQFFRNMYLWALRITGTGVTWRSKFRQYAYRSPENYLTDDFLARCSGLPVIWLHPEKNTLNSEEYAARTIGAIAFAWIQGDEVWGMARIYDTDAATILSTRQLSTSPTVTGGDDVLINVDGEPLLLEGNPVLLDHLAICEQGVWDKLGEPTGVKSDTLLNEVQKMDEEKVLALINQALDAREARAKADAEEKAKADAEAAEKAKADEDAARLKEEEEKAKADAEAKAKADAEAEEKAKADAELEKIRADMEEMKSRVPQELSDEERNEIADTQCKADSVFASFGERAPQPMAGERAMPYRRRIMTRLQKYSSDYKEVDLHAIADSQLLSIAEKKIYADAQASAASSLEPGAGLREVIRTDATGRRISTFIGDPSATWAPFQAVSRKVAGIKQ
complement(2761958..2762833)       hypothetical protein; IT784_13475                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMNSFLKELRDAIKFFLEHGYSSEESLIMWTERLRNATEDKIGGDDFYRYVSRRLTAAYDLEVGRERALKRHPGVSRFTLNYLEPKLRAELDRRIMASADLIKLNRTQAVDRTIQRFSGWATSIPPITSISPGLSASSRSGVVATSQHIAKSARQIDFERRRVMVDQTHKLIANIDNIIATDGGAIAAVWHSHWRQPHYDYREPHKDRDLKTYAIRGNWALKKGFMKAGPAGYLDEITQPAEEVFCRCYLTYIYNVRSLPDEMKTEKWRKFTEGNMSVGRRTANFEGFRNGG
complement(2762805..2764235)       DUF1073 domain-containing protein; IT784_13480                                       N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMQDDDDICMGSNAGVLSKILEGGSIEPGAQAGYELCKLIYLFHPLGGKMVDRPIKLAMSEPRTVHVTRGPERRLREAFEREWKAIKADRIIANTARQSRIYGVGAVVMLVDGEPTNEAAEFESLYKKSITFNVLDPMNTAGSIVMNQDPNSADFQKVGNVTVASKPYHHSRCCVMMNEDPIYLAYTPSSFGFAGRSVYQRALYPLKSFIQSMRADDMVTIKAGLLVAFIKQASSIVNNMMQKMSGIKRWMLKRGGNGDVLQVGEHDKIESLDMQNLEKPLDTARNHILANIATAADMPAILLNSETFTRGFGEGTEDAKAVAQYIDDVRKDLQPLYDFFVRIVQYRAWSPEFFEALKNDLPEYKSISWEAAFSSWVNNFDYVWPSSLKEPESEKVKVDETRFKAITEMLTVLLPQLTKDPQNRATLIKWACENANMNENLFADRLELDYEQLEQNPPDATLPGEGNFDELLSERAA
2763755..2763766                   attL                                                                                 N/A                 TTACATTCCCGA
complement(2764235..2765506)       PHAGE_Salmon_SSU5_NC_018843: putative terminase large subunit; IT784_13485; phage(gi410491412)     3.84e-16            SalmonellaentericasubspentericaserovarTyphimuriumMATEHVIEFLPFHAGQKKIYRSPAKRKVIRAGRRFGKTTMLEQAGGNWAARQMRVGWFAPSYKILLPSFKTIRDLLKPITISSSKTDSIIELIGGGLVEFWTLDNPDAGRSRKYHKVIIDEGSLVKKGMRDIWEQAIEPTLLDFDGDAVMAGTPKGVDDENFFYQACNDKSMGWEEHHAPTASNPTINPAALARIIDGRPPLVVQQEYNAEFVDWRGQNFFKLDWLLENGAPVDYPFSCDTVYGVVDCAQKGKLQNDGSACIWFALDNLPSPHLIILDWDIIQIDGYFLKDVVPQWEGKAKHLSEICRARMGTTGLFIEDKATGITLLQQGANEGWNVHPVDSELTSLPKESRAINISGYVASGKVRISKYAFDKIVEYKQSKKNHLLTQVLQFIIGEENQDDDLFDCFNYGVALGLGNGEGF
complement(2765496..2766467)       PHAGE_Burkho_BcepMigl_NC_019917: terminase small subunit; IT784_13490; phage(gi431809885)     3.15e-47            SalmonellaentericasubspentericaserovarTyphimuriumMAKPDWGALQHQFLAEHAKSGISPKDWCEAQGLNYSTARRYIKKPTAQSAQKNAQKKMRTAQAKKSAEKLLNSELTPQQKRFVAEYLIDQNATAAAERAGYSDASYGRQLLTLPHVAQAIAQQQRDSLVRTLASADEVLEKMWQLATFDANEISQYRRGCCRYCWGFGHNYQWRDVIEFEEREAEAKAKKGKEPDDAGGYGYNHNREPNPDCPRCNGDGVGRPHFADTTKLSPIARLAYSGTKLVKGGIEISTISREKMFEAIMRRLGLAESELAQRLLDLEIRKRTAEAERLEQEVELKRKGKGKDDEPTVVIKLVNSPDGD
complement(2766560..2766778)       PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; IT784_13495; phage(gi422936678)     2.99e-06            SalmonellaentericasubspentericaserovarTyphimuriumMLDGYFNLDGDSGEEFISKRKRLLAVQAALEIAKQSVGNSHQSTVSRVNEDLSKTADGIEKLADAIQSALEK
complement(2766857..2767354)       PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; IT784_13500; phage(gi422936675)     7.01e-22            SalmonellaentericasubspentericaserovarTyphimuriumMALVVAIAVLCVLLARSNAALATSESDNRVLRSDNALQSTVITTQAFNFNRFNQVAENASRLNSLIDAGTEKTVIEYREILRREKTCDLPVPADIAGGLLEYAYRLRASAMHADSGNADATSDGAVAANSITYCQAVLWIKPLLGAIEKGNNKLEGIREMQQERK
2767487..2768086                   hypothetical protein; IT784_13505                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRFFKNTAWPCITVIVACISWVLVNGDKVVDNVHAFRTWYGTSKALEGRWNNSTEFDIDPPEWLTNQKDFVEVRITLKNSVVDGTISSGKLRKIFPYDYVLLTGEKRGFRDTLDAYAFDYVLGKKIYFGSFVLSREGERLYVVADETAQKYFPKESILLKVSDDAFPNLKNDKLSNEKSETNENPPIRRVSPNHKDSNQ
complement(2768098..2768625)       PHAGE_Cronob_phiES15_NC_018454: putative endolysin; IT784_13510; phage(gi401817587)     7.28e-65            SalmonellaentericasubspentericaserovarTyphimuriumMAQLKLSKKSGAAGIVCSVGTIIAIVLNAGNVRTNERGLELIGNAESCFRDPYVCPAGVLTDGMGNTHDIKLGTIKNDQQIAAEWEKNILEAESCVNHYGNGRKLSDDTFSAAVSVTFRAGCGNMRGSTMFSLFRKGDLKAACNQFPRWVYGGGRVLPGLVTRAEKEEALCLDGL
complement(2768603..2768923)       PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; IT784_13515; phage(gi423262443)     1.36e-54            SalmonellaentericasubspentericaserovarTyphimuriumMQRMNPTDGHNLPYWWSTALGLFSVLSLQDYVFILGAIISAFFTIKTYYTRRKEERERLAEEKKRTQLLANYLSEVGQKLHSDRPATAEVVTEAMRRIASGTVETE
complement(2769357..2769935)       DUF1133 family protein; IT784_13520                                                  N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMINPSTTGKGGEMLRLNTLESVWIQGKLRMWGRWSYIGSGSGGHMFNNLLASKKVSKTAIQQVLKHLKSSGLDHGELMSYFMDMLSGKAKSNLAFCTDEEGLLMDAVIGEILIRSGYQRLFELIVDRYKNRMSKKSMARELNIRHPEWCLRTCESRIDVWLQMAEAMLYLPMCDVFDKKADRFRLQSCAGIA
complement(2769932..2770225)       PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; IT784_13525; phage(gi422936664)     4.19e-30            SalmonellaentericasubspentericaserovarTyphimuriumMKKIELAKQARGRMCTVRIPGICNFDPETSVLAHYRMSDTCGMGIKPHDMQGAIACNCCHDVIDGRVKTDIDQDTLRLYHAEGVFRTQEIWREEEFI
complement(2770222..2770818)       PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; IT784_13530; phage(gi422936663)     1.04e-98            SalmonellaentericasubspentericaserovarTyphimuriumMAQYSFVKSAGGVLIPATPDAREFIDKKFRLGAVLYADFKQARNAAFHRKFFALLNLGFDYWQPSGGTISPVDKKLVRGYVQLVAYYAGHEETLKELADQYLRDEAEKRAGNISAVKSFEAFRAWVTIQAGFYTRYEMPDGTIRNEPKSISFAKMDDIEFSQLYKSVLDVLWNYILFRTFPSQQAAENAASQLFSYAA
complement(2770887..2771078)       PHAGE_Salmon_Fels_1_NC_010391: hypothetical protein; IT784_13535; phage(gi169257165)     7.07e-06            SalmonellaentericasubspentericaserovarTyphimuriumMFKKTEIGEHLPDNGRVLITCKNGKVMSLRNVYDDEHVASLKSLLELAEQAGCIVVQKGKQRV
complement(2771262..2771600)       PHAGE_Entero_Tyrion_NC_031077: tail fiber protein; IT784_13540; phage(gi100052)      7.23e-60            SalmonellaentericasubspentericaserovarTyphimuriumMAKSASERKAAQRARQSAAGERKIELVLDSQELDMLERNCAARRPGRAPYEMGEYIAMLIRQDDARVRGRIKSISANQCGKCGDALPITSCPCAGDSQCWVTSGWHAVKLTM
complement(2771600..2773636)       PHAGE_Pectob_ZF40_NC_019522: putative methylase; IT784_13545; phage(gi422936661)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMREIIVDNFAGGGGASTGIEMAIGRSVDIAINHDENAVAMHTTNHPDTLHYCESVYEVRPKVATAGRPVALAWFSPDCRHFSKAKGAKPVEKAIRGLAWVVLRWGLDVEPRVMKLENVEEFKTWGPLLREMPFISHADRFLDEFIGPPEPVEQRPDPARIGETFNAFVAMLTTGISASHPALAECCEFLNISLDSKDAARLVKGLGYVVEYRELRACDYGAPTIRKRFFMVMRRDGKPIVWPEPTHGDPKSPAVQSGRLAPWRTAAECIDWTIPAPSIFERKKPLAENTLKRIARGIQRFVIDSVSPFIVKCNHTTTKGKYDCFRGQALGEPLQTITKTHGYALAVPHLTKFRTGATGQALTEPVPTVTAGTSKRPGGNGHALGIVEAALTPFLAGNGGSEYQAKPRPLDKPAHTILKQSRACLVAPVIARQFGASVGHRADEPSATITAGGGGKSQLVTPTLIQMGYGERPGQEPRVLRLDNPLGTVTAGGNKFATVSAFLAKHYGGNYTGPGVVLDEPVHSVTTVDHHALVTSSIIKMRGTNTGHPTDMPLQTVTAGGQHFGEVKTTLAVTEYDEHRAQQTLAFLRKYCGEDCDGLVEMDGITYRIVDIGMRMLQPHELYRAQGFPEWYIIDQDYRGKKYAKDKQVARCGNAVPPPFAEALVRANLPELCVNREAA
complement(2773633..2774388)       PHAGE_Pectob_ZF40_NC_019522: putative methylase; IT784_13550; phage(gi422936660)     5.74e-83            SalmonellaentericasubspentericaserovarTyphimuriumMTNAATILDMCCGSRMFWFDKQDERAVFTDIRAEQHTLCDGRHLIISPDMIADFRALPFADTSFSVVVFDPPHLKYVGPEGWQGKKYGKLNQDTWRNDLRDGFSEAFRVLRIHGVLIFKWNETQIPVREILALTDEKPIIRQRTGKGDKTHWIIFTKETGNDPCNIKNVLLDSAYRRLHELESLLLPEIPETVWPAEVNMIFEQIKNAESLPGNHQRRLKHHINRMWLEKMPVPAIVAAARSLMSAMEKYA
complement(2774385..2774987)       PHAGE_Escher_TL_2011b_NC_019445: putative adenine methylase; IT784_13555; phage(gi418487629)     6.20e-122           SalmonellaentericasubspentericaserovarTyphimuriumMNKKYTLIYADPPWAYRDKAADGGRGAGFKYPVMNVLDICRLPVWDLAAQSCLLAMWWVPTQPIEALKVVEAWGFRLMTMKGFTWNKCGSRQTDKLVMGMGHMTRANSEDCLFAIKGNLPERIDAGIVQSFTAPRLEHSQKPDFVREKLVQLLGDVPRIELFARQSSHGFDVWGNECDSPDVMLLPGIAEFIKEHGECAA
complement(2774980..2775228)       PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; IT784_13560; phage(gi422936657)     7.40e-17            SalmonellaentericasubspentericaserovarTyphimuriumMAGQSDYLPPGLPLNRAKWPQECQLKEHYDMRAAALVRQLYERKVTRQMVIQHIDATPESYRDFFRGRLNYWRQMREGGNSE
complement(2775232..2775912)       PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; IT784_13565; phage(gi422936656)     5.01e-11            SalmonellaentericasubspentericaserovarTyphimuriumMTDLIYPKVETIDDGCDWTNVIIWRMNAGARARSRSMYVPCPRPVPVPGLTVRVPSTVKKVKLSGPAPRRHTKTHTGTVIYSGGEKTVKLRETATVWTSGSKENYDKKTGYRVGVTSRCRLLLDSIKPIAASTEPVVQSKSSELPAVQLVAIMKGKTLSYQGIMSAIKKYHPDIKITLEQLQKRVFALCMSNFVGIERHDDMPVTHFTLKSVDPRFYVHSEKNMRA
complement(2775950..2777338)       PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; IT784_13570; phage(gi100043)      6.39e-135           SalmonellaentericasubspentericaserovarTyphimuriumMSPQELEACVLAGLLNGGASPDAFDVIASTPEESFSIGFYRRTFSEIKKQALTSGMIDMLFISEALGGSSLANLSEISRIPATVPNLKGYARKMVKAWRSRALAKLLQDGADGIRNAVNQEQRDQIVENAVAQLLDMTADSGDVQPVHINELLPAYMDTVQKRMDGDESTRNLLTGIVDLDNATGGINPQDLIVVAGRPGMGKTEFALTVVEGVTSKGGGALIFSMEMAAAQIVERSLAGAGNLSVSRLRNPLDMYDEDWARLTAAIGELTDRDIWIVDATDLTVEQIRAIAETHKRRHPHLAMIMVDYLGLIKKPKAERNDLAVAHISRNLKTMAMRLHTPTFALSQLSRAVDARPAAQRRPVMSDLRDSGSIEQDADSILFLYRDEVYNPESPAAGVAEVILGKCRFAAAGTVIYQEFKNGHFLPIDQHVGKEKTRIQLEAAKPRKPHRKYSEKYNTDAF
complement(2777335..2778315)       PHAGE_Pectob_ZF40_NC_019522: putative replication protein; IT784_13575; phage(gi422936654)     2.12e-64            SalmonellaentericasubspentericaserovarTyphimuriumMSMTLMARAMAIKTGNPIRKLVLIKLADNANDNGECWPSYQHIADHCECSRSAVRSHIDALIGMGVLTKENRMGINNGKGNTSNVYYLNLDNPMPPKSTAPVPSKITGMPLENTPPMPCGGTRTSHSFEPVNEPNDPPNPQKGEGDEWLLADAKKALEFYNEQTGTRCRDIKPFVLMLTPTQTREAYTLAELQLVIRWVLATWRRRGSGLPKPANICRVNRFDGYLADAEAWATTEADVDPDAVMKGYNEIFADTLPAAELDADRRGMIIRLAAHMKNKTTGAFLGYFEKFRADAPDFYFGASGWRASFDYLMKPETLRKTREEAL
complement(2778318..2778542)       PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; IT784_13580; phage(gi422936653)     6.81e-14            SalmonellaentericasubspentericaserovarTyphimuriumMQTSTDRITWRNGWRLNGEPSCAHDVRGIFEERLAAKKWEIYEQRKAEMIETCVFLTPKDYELACRELAELLGI
complement(2778565..2779011)       PHAGE_Pectob_ZF40_NC_019522: putative cII repressor; IT784_13585; phage(gi422936652)     1.57e-34            SalmonellaentericasubspentericaserovarTyphimuriumMENLDELKREIFNWAAERGQEHVAIEITRMWFRMGGNTNCVKLHPMEDSKGNADWRAINNNRQQIFRWLRGETKAARIKTKALAMAMEAALPAERYAQLGMTTQQLICIAIRDFAAAIIALLLDARDRPQRIAQALQAIQETQRLTSV
complement(2779076..2779309)       PHAGE_Escher_Lys12581Vzw_NC_049917: putative phosphoesterase; IT784_13590; phage(gi100037)     2.35e-16            SalmonellaentericasubspentericaserovarTyphimuriumMDLKTYLKTSGVRQQDFAQVVGETQGYVSRVASGKCLLGAATALKWAAATGYQVTPHDLLPNIYRKPTDGLPEQNAA
2779418..2779873                   PHAGE_Erwini_vB_EhrS_49_NC_048197: tail fiber protein; IT784_13595; phage(gi100052)     3.96e-09            SalmonellaentericasubspentericaserovarTyphimuriumMRKKTLDAAEADAAQRLRDIWNEKKVSLRLTQEKAADALGFSTQATVSQYLNGSIPLNTDATLKFSALLGVKPEDIRPDLAELMNYVRKSGAHVQDYSAAGWRLLKPEDAELIALYERLPHSEKERHLSELKEKVSEFDRLFEELLATRKQ
2780561..2780884                   hypothetical protein; IT784_13600                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMEALAIPVKLYIHYNTNTFAQEKVIVSTCDMSRTFPDQYVLLETRDISIDVNQPEPFDIIALQVDQLRGQKEKIATLAKHQIAQVDDKIQQLLCIDHSPVQESDIPF
2780892..2781137                   PHAGE_Salmon_IME207_NC_031924: hypothetical protein; IT784_13605; phage(gi100075)     8.96e-21            SalmonellaentericasubspentericaserovarTyphimuriumMQTEIIIDKVMSAGLSVLEHENNGDFGNGVMHLTIVGGVRRVEFYPTTGTVYANAVKGKYPVFKQKKAGIKVAIRLAKSGA
2781167..2783440                   PHAGE_Pectob_ZF40_NC_019522: putative exonuclease; IT784_13610; phage(gi422936647)     2.83e-126           SalmonellaentericasubspentericaserovarTyphimuriumMTIYNCLFEPKKSAIKDGAVALAISIEAPNKKVAESIVIGKLWEHYPANGDNYFKPKIWEDSEGQPRPEVGKFDERFVQTNTFDGEKWIANKPDTSVPGLPGSNEIIDLMKLPARERFAAVLMFSNSPIDGVLYSQVLDYLDNLENNTEPFDDDDRINSNILHALHNNEPVRHMHIEGLNNLIQAIFAKFEDQTPGKAAISQFIKRWLENPGKREEMVPSKTSSLNTSDNIESPKVAPLRGYKHTYATLDQEIAVALLPISPDTPVLSGNLRDAEKIIAEDREDFKRWSMALRTTEKILKYDRPSIFGVIQNTPAKDIYHFPESLRRHIDSWLIEHGQFECPEPDAERTGKLLAAARGEYVEGISDPNDPKWVKTDTQPQVSNLGNGMFSVDNLMSEAASNECKKQEVTEQGTVTDDQATQARETLNSMGYGVYATNRDEAIQQEEKLSDKVKNIVQDVDQLVERIKREEQFPQASELVQSINEMQSAERDNLELWKNVFKTDERFTTAFSVNGGGTSINGTYMTMIATREFGPKGIGWGVDILEERFDNGAPITRTVKGTDGNNTWELIPDGVGGVLTEKHHVIKIRLWYIRNSVRGEEISFGCTPYIYGSKYGPICDGEATKKSLTDATKKALSALGFCADIFMGLYDNPEYRQKNKAEFALKNASENAEDAARVRQELDDKLTRVANTIASAVSENEINKVYSSIAREAEVHRKDAEAKGDTQHARYLGGRLRRLTTIKDERIAELNKAQEKAE
2783437..2783991                   PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; IT784_13615; phage(gi422936646)     1.94e-67            SalmonellaentericasubspentericaserovarTyphimuriumMTTAIALAADYTSLLQLLESSDELTPEMIADTLECIEGELADKLDAIMVIARNNLGHAKTCDEEIKRLAERKKYFENKDKTLRKYILSCLMAANLDKLKTSKNTFSARKGSISVVIDNEKLLPDELVTVQTIIAPNKKAIKEAIEAAEAAAAQITADGGELPAELLNPVPGAHLEIGERSLQVR
2783994..2784176                   PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; IT784_13620; phage(gi422936645)     1.40e-14            SalmonellaentericasubspentericaserovarTyphimuriumMLKLSLKRGDAVHVVFADGSNGIIEARSRCELGMHLPKNVKVTREKGAFLPENLIKRNQK
2784389..2784613                   PHAGE_Pectob_ZF40_NC_019522: hypothetical protein; IT784_13625; phage(gi422936643)     3.42e-18            SalmonellaentericasubspentericaserovarTyphimuriumMTRENDLLTDAELIEFTGYQKPSKQREILDRGGVSYIPDREGRPMVTWTHINAVLNGQIIVQQSTETKPDFGAI
2784493..2784504                   attR                                                                                 N/A                 TTACATTCCCGA
2784614..2785633                   PHAGE_Salmon_ST64B_NC_004313: Integrase protein; IT784_13630; phage(gi23505472)      1.55e-116           SalmonellaentericasubspentericaserovarTyphimuriumMGRRRKDLGDVKLPPRVSKTRTRYYYKPTSRETVTLGPITLTMSALWKRYEEERRNYSDVMTFEKLWGMFLKSAYYTELAIRTQRDYLQHQKKLLAVFGKVKADVIKPEDVRQFMDRRGLQSKNQANQEMSSMSRVYRWGYERGYVKGNPCAGVSKFSLKAREQYITDEDYLAIYKHADHVVRAAMEISYLCAARQADVLALRWMQISDKGIFIQQGKTGKKQIKVWTPRLQQALKTAQTECPKLSPDALVLYNNDRGQFIRKTFNNRWLKAVRAAQSELGRQLDYTFHDIKAKAISDFEGSSRDKQIFSGHKTESQVLIYDRKVQISPTLDRPVIGEK
complement(2785739..2785826)       tRNA                                                                                 N/A                 GGAAGTGTGGCCGAGCGGTTGAAGGCACCGGTCTTGAAAACCGGCGACCCGAAAGGGTTCCAGAGTTCGAATCTCTGCGCTTCCGCCA
2786221..2786880                   FtsH protease modulator YccA; IT784_13640                                            N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDRIITSSRDRSSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLMLPSPGLILTLVGMYGLMFLTYKTANKPVGILSAFAFTGFLGYILGPILNAYLSAGMGDVIGLALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILYETSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGFASRD
2786967..2787296                   PHAGE_Podovi_Lau218_NC_024329: sulfur transfer protein, DsrC; IT784_13645; phage(gi971848691)     9.46e-08            SalmonellaentericasubspentericaserovarTyphimuriumMLIFEGKEISTDSEGYLKETTQWSEALAVAIAANEGIELSAEHWEVVRFVREFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGLPKPVKCI
complement(2787293..2787574)       acylphosphatase; IT784_13650                                                         N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMSNVCIIAWVYGRVQGVGFRYTTQHEAQRLGLTGYAKNMDDGSVEVVACGDAAQVEKLIKWLKEGGPRSARVDKILTEPHSPRETLTGFSIRY
complement(2787623..2788402)       helix-turn-helix domain-containing protein; IT784_13655                              N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMHIRHQDLTTAEVRSSHLHRLHRVTLFSAAICHITQGSKVIIQDDSRLVAGPGELIIIPANTPLEIINQPAQSGFRSDLLLLSPEIIARFKTMYVQDYPPANLTSLCTPMSRSLTFMWENVLDAVRQGLPVGLQEHQAMGLLLALLHDGAAGPLLIERRYTLTEQVRQLIMLSPAKLWTAQEIARRLAMGTSTLRRRLQRESQSYRQIVEEVRMSCALSQLQSTTLPIGEIALRCGYLSGSRFTARFRQHYGCLPSQVR
complement(2788428..2788976)       YbhB/YbcL family Raf kinase inhibitor-like protein; IT784_13660                      N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMKTVFSLTAAAMMALSGSVSAASAFSLSSADIPADFRLTQQHVFKGFGCSGENISPQLSWRNPPAGTKSYAITVFDPDAPTGSGWWHWTMVNIPAQIHDLPTGADKKTLPTGVVQGRNDFGYAGFGGACPPPGDKPHRYQFTVWALNTATLPLDSESSGALVGFMLNAHVIAKAQFTATYGR
2789191..2790402                   PHAGE_Strept_20617_NC_023503: methyltransferase; IT784_13665; phage(gi588295144)     6.92e-28            SalmonellaentericasubspentericaserovarTyphimuriumMTESTFPQYPRLVLSKGREKSLLRRHPWVFSGAVSRLEGKANLGETIDIVDHQGKWLARGAWSPASQIRARVWTFDKAEFIDIAFFTRRLRQAQQWRDWLAKKDGLDSYRLIAGESDGLPGVTIDRFGHFLVLQLLSAGAEYQRAALISALQTCYPDCAIYDRSDVAVRKKEGMALTQGPVTGELPPALLPIEEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVENQRVLNCFSYTGGFAVSALMGGCRQVVSVDTSQDALDIARQNVELNQLDLSKAEFVRDDVFKLLRAYREHGEKFDVIIMDPPKFVENKSQLMGACRGYKDINMLAIQLLNPGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRVM

#### region 5 ####
2817434..2817712                   PHAGE_Entero_mEp390_NC_019721: DinI-like family protein; IT784_13785; phage(gi428782688)     5.28e-35            SalmonellaentericasubspentericaserovarTyphimuriumMFVELVYDKRNVEGLEGASEIILAELTKRVHQIFPDAEVRVKPMQANCLNSDTNKSDREKLNRWLGWFQITRVGSDHSKYRRHRIRNSVMNQ
2818024..2818725                   PHAGE_Entero_YYZ_2008_NC_011356: hypothetical protein; IT784_13790; phage(gi209427795)     6.19e-26            SalmonellaentericasubspentericaserovarTyphimuriumMFLTFPNVRITPDNRIDKLSENDLGLIRDTAIQNGGRKVQVQLRDLLYEVSNRAVEGDNYIFEVRCSTTDRAMFRERCMEWQGNAIRLEQQLNIGLNVSHGNFLNMSATSFSNNSQELAAHISPGAPAIFDTSNKQQLVDKINLCSFSPNVDELSCTEENLKCPVMLIVPEKGVFVKTWPESNICQLIDEKALIQLVINGAVHPVSRAPLSLDMIINKNECYFDTAKDNFIIP
2818384..2818396                   attL                                                                                 N/A                 CACATTTCACCAG
complement(2818857..2819062)       PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; IT784_13795; phage(gi100026)      1.34e-16            SalmonellaentericasubspentericaserovarTyphimuriumMERVLIVERTRAGLAAAREQGRIGGRRPKLTPEQWAQRGQGYRDSRRLFMMDCRRCTERFRKASSGA
complement(2819647..2820165)       PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; IT784_13800; phage(gi15834244)     1.97e-59            SalmonellaentericasubspentericaserovarTyphimuriumMELKNVNRYIPDDPDYDSNFLYFRSEDGQDFYESLSKFTKKYKLCIDSDNIIRSVSEDVSRLYPAGFSVVEVNKLPAGFNIYGDWKYSNGAVVAVPVDYHAKAETTRQKLLTDANSTIVDWRTELALGDISDDDRASLTKWMVYIRALKMLDLSDVKDSATFTEIRWPELPQ
complement(2820180..2821811)       PHAGE_Salmon_ST64B_NC_004313: tail protein; IT784_13805; phage(gi23505468)           3.98e-163           SalmonellaentericasubspentericaserovarTyphimuriumMISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKAVMSEIQTKAPLDSPAFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLRETINRAAGAMQKSQNGDDIPDKTRFARTIGAVTSTSVTFGESGWFKIATVFMPQATSTAVIKLYGGSGFNVGSFEQSTISELVLRAGNGSPVGITATLWKRSPNGVLECAWINTSGDNYDIYVRINQYAYWLIAQYDYTGNANVTLYNAPEYSETKPANAMNGQTYTLYNSMMKPTPDDVGALSVNGGRLNGPLGIGTDNALGGNSIVLGDNDTGFKQNGDGILDTFANSQHTVRVAPGEMQVLGAIRAGDAKRMTMTSSNNSVLNAQFHLWGDGNRPTVIELDDDQGWHLYSQRNTDGSIQFVVNGQVIPDNYGNFDARYLTSGNVYTKGESDNRYVQNIQRGAPVWPGKVDEYGPAEAPAGCFLTQARHDPTTAYGVTFAYRPLQMWVGNGWRTING
2821927..2822442                   hypothetical protein; IT784_13810                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMDASDADDEAAVALAAAVLADVAAFVSDIFAAAADAAAAFSDAAAAVADAPASPALEAACVSDVFAAVSDAPARAADVCAAVALAAAAAAESPAAVREASAFASDVFAAAADAAAAVLAVSADAALADASPAFVVAVPALLSADAADEAACVADASAAPAAFTAAVALSDA
complement(2822653..2823048)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage tail tip assembly protein; Lambda gpI homolog; IT784_13815; phage(gi169257217)     5.33e-87            SalmonellaentericasubspentericaserovarTyphimuriumGAVIHIVPRLAGAKSGGVFQAVLGAALIAVAWWNPAGWLGAAAVSGMYMTGASMILGGVAQMLAPKSKMSEMRQTDNGRQNTYFSSLDNMVANGNTLPVLYGEMQVGSRVISQEVSTADEGDGGQVVVIGR
complement(2823086..2823631)       PHAGE_Phage_Gifsy_1_NC_010392: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; IT784_13820; phage(gi169257236)     2.91e-115           SalmonellaentericasubspentericaserovarTyphimuriumMNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWYAERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELKNAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDVVRTEIARASGRAATIADVEKWTDDFRRAQGE
complement(2823676..2823867)       hypothetical protein; IT784_13825                                                    N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMGGHQSLRVLSGSQGHYGAAASQDFTPYENFQGKARSVLLIVYFLFLKVFLEKRKDLLDNVFS
complement(2823890..2824267)       PHAGE_Klebsi_phiKO2_NC_005857: Gp63; IT784_13830; phage(gi46402149)                  1.61e-54            SalmonellaentericasubspentericaserovarTyphimuriumMFTVKTIINGVTHICEQPSISIARAGSETFADTLKLTHNSASPDFAYWLPAIYEDPEMTKALQEEELVISDRTDVLDTDAIPIIIEEYPSENFPGAGDGCRYQFIYSGDQVYVMNSNGATIEAVK
complement(2824930..2825376)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; IT784_13835; phage(gi169257238)     5.30e-85            SalmonellaentericasubspentericaserovarTyphimuriumMFVGLLLVSLIVAGLLANHYRNNAIAYKEQRDTVTHKLALANATITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGGRVRVEGRCTVPTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCR
complement(2825394..2825846)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysin protein; endolysin; IT784_13840; phage(gi169257239)     2.87e-103           SalmonellaentericasubspentericaserovarTyphimuriumMMRISEKGITLIKEFEGCSLTAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSKLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGGKALNGLTRRREAERALFLS
complement(2825830..2826159)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; holin; IT784_13845; phage(gi169257240)     1.57e-73            SalmonellaentericasubspentericaserovarTyphimuriumMNDKTPEFWAAVLTGLKNAWPQILGALMAGLIAYGRLIYDGATRKNKWLEGVLCGALSLCVTSALDVVGLPVSISPFVGGIIGFVGVDKLREIAISALKKRAGVNDENQ
2826435..2827121                   PHAGE_Phage_Gifsy_1_NC_010392: virulence protein GogA; IT784_13850; phage(gi169257241)     1.82e-167           SalmonellaentericasubspentericaserovarTyphimuriumMPTGIKPIFINNMMSTYGLSHPHDSKVFPDLPEHQDNPSQLRLQHDGLATDDKARLEPMCLAEYLISGPGGMDPDIEIDDDTYDECREVLSRILEDAYTQSGTFRRLMNYAYDQELHDVEQRWLLGAGENFGTTVTDEDLESSEGRKVIALNLDDTDDDSIPECYESNDGPQPFDTTRSFIHEVVHALTHLQDKEDNNPRGPVVEYTNIILKEMGHTSPPRIAYESSN
complement(2827336..2827524)       PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; IT784_13855; phage(gi169257242)     5.18e-40            SalmonellaentericasubspentericaserovarTyphimuriumMKEGFYWIQHNGRVQVAYYTHGVTEDLETGQTIIGVWHLTQGDDICHNGEAEILAGPLEPPI
complement(2827613..2827689)       tRNA                                                                                 N/A                 CCGCCATTAGCTCAACTGGAAAGAGCACGGAGCTTCTACCTCTGTGGTTCGGGGTTCGAATCCTCGATGGCGGACCA
complement(2828031..2828594)       PHAGE_Phage_Gifsy_1_NC_010392: conserved hypothetical bacteriophage protein; IT784_13865; phage(gi169257243)     2.72e-135           SalmonellaentericasubspentericaserovarTyphimuriumMTTQISVETLSPITHNQIPVITTELLAHLYGTKIKNISDNFLNNTTRFVVGKHFFKIEKNELREFKNRPETIGLVGKNARSLILWTERGAARHAKMLETDQAWEVFEKLEDCYFSQTLPSPTRQVQPAVDMLNIDLLIKIRDGNVKDIRQVGPDMFVGKVEQILSGLRDSGWIVIKRDLLAEKLATW
2828684..2828911                   PHAGE_Phage_Gifsy_1_NC_010392: RecT; IT784_13870; phage(gi169257263)                 5.63e-46            SalmonellaentericasubspentericaserovarTyphimuriumMTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRVTLDDMKPEYIG
2828954..2829193                   PHAGE_Phage_Gifsy_1_NC_010392: hypothetical protein; IT784_13875; phage(gi169257264)     1.91e-52            SalmonellaentericasubspentericaserovarTyphimuriumMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2829234..2829482                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; IT784_13880; phage(gi169257269)     2.25e-55            SalmonellaentericasubspentericaserovarTyphimuriumMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
2829366..2829378                   attR                                                                                 N/A                 CACATTTCACCAG
2829527..2830819                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; IT784_13885; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
2831014..2832216                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; IT784_13890; phage(gi100242)     1.28e-49            SalmonellaentericasubspentericaserovarTyphimuriumMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNADVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLQKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQIRKAS

#### region 6 ####
3231648..3231659                   attL                                                                                 N/A                 TACTGTCCAGGT
3242304..3242975                   PHAGE_Erwini_vB_EhrS_59_NC_048198: holin; IT784_15835; phage(gi100034)               1.61e-107           SalmonellaentericasubspentericaserovarTyphimuriumMCGRFAQSQTREEYLAYLADKADRNIAYDPEPIGRYNVAPGTKVLLLSERDEQLLLDPVFWGYAPGWWDKPPLINARVETAPSSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDDAEGFLIVTSAADKGLVDIHDRRPLVLSPGAALEWMRQGISGKEVEEIITDGAVPTDKFTWHAVKRAVGNVKNQGEKLIKPVT
complement(3242968..3243063)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; IT784_15840; phage(gi399528790)     3.94e-11            SalmonellaentericasubspentericaserovarTyphimuriumAGQGIPQQWAMKREMLSPRYTTRFSDLPIVR
complement(3243096..3243301)       PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; IT784_15845; phage(gi169936026)        6.60e-13            SalmonellaentericasubspentericaserovarTyphimuriumMERVLIVERTRAGLAAAREQGRIGGRRPKLTLELWAQLGQEYRDSRRLFMMWGCRRCTENSRPLNWLAA
complement(3243930..3244448)       PHAGE_Salmon_Fels_2_NC_010463: P2 gpG-like protein; IT784_15850; phage(gi169936029)     4.00e-40            SalmonellaentericasubspentericaserovarTyphimuriumMELKNVNRYIPDDPDYDSNFLYFRSEDGQDFYESLSKFTKKYKLCIDSENIIRSVSEDVSRLYPAGFSVVEVNKLPAGFNIYGDWQYKKGAVVAAPVNYHAKAETTRQKLLADANSTIADWRTELALGEISDDDKDSLTKCMAYIRALKTLDLSGVKDASAFTAIRWPSLPQ
complement(3244463..3246946)       PHAGE_Salmon_ST64B_NC_004313: tail protein; IT784_15855; phage(gi23505468)           2.38e-175           SalmonellaentericasubspentericaserovarTyphimuriumGYPPSHAGVITVYDDSKPGTLNDFLGAMTEDDVRPEALRRFEAMVEEVARQASEASRNATAAGQASEQAQTSAGQASESATAAVNAAGAAEASATQAASSAASAESSAGTATTKAGEASASAASADTARTAAAASAAAAKTSEANADASRTAAGDSAAAAAASATAAQTSAARAGASETAAKTSETQAASSAGDAGASATAAAASEKAAAASAAAAKISETNAATSASTAAASATAASSSASEASNHAAASDTSASLAAQSSTAAGAAATRAEDAAKRAEDIADVISLEDASLTKKGIVKLSSATDSDSEALAATPKAVKAVMSEIQTKAPLDSPAFTGTPTTPTPPDDAKGLQTANAEFVRKLIAALVGSVPESLDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSVDGLIEYVGLGETINLAAGALQKDQNGDDIPDKKQFARTIGAVTSNTITLGESGWFKIATVVMPQSTSTVVIKLYGGAGFNVGAFETAAISELVLRSGNGSPAGIIATLWKRSPNGVLECAWINTSGDTYDIYINIGQYAYWLIAQYDYTGNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTPEDVGALSVNGGRLNGPLGIGTDNALGGNSIVFGDNDTGIKQNGDGILDTFANSQHTVRVAPGEMQVLGAIRAGNAKRMTMTSSNNSVLNAQFHLWGDGNRPTVIELDDDQGWHLYSQRNTDGSIQFVVNGQVIPDNYGNFDARYLTSGNVYTKGESDNRYVQNIQRGAPVWPGKVDEYGPAEAPAGCFLTQARHDPTTAYGVTFVYRPLQMWVGNGWRTING
3247122..3247367                   PHAGE_Entero_cdtI_NC_009514: Valyl-tRNA synthetase; IT784_15860; phage(gi148609417)     3.41e-45            SalmonellaentericasubspentericaserovarTyphimuriumYQEAVIGNSPVTQDGWISCSERMPNDKQYVWCWGKSCGWTEYDTFEGYYDWSRNKWWAVTDDGEEPASKVTHWMPLPEPPL
3247464..3247643                   PHAGE_Entero_UAB_Phi20_NC_031019: tail tip protein; IT784_15865; phage(gi100054)     1.70e-34            SalmonellaentericasubspentericaserovarTyphimuriumMSCPKCGSGNIAKEKTMRGWSGDYVCCDCGYNDSKDAFGERGKNEFVKINKEREGNEKS
3247745..3248095                   PHAGE_Salmon_vB_SemP_Emek_NC_018275: hypothetical protein; IT784_15870; phage(gi399498819)     2.74e-75            SalmonellaentericasubspentericaserovarTyphimuriumMSDLAMKVLKWQSTGDVGISSATMASIALGLEKNFYHGRFDAPSDPADLRRCMMLVDEIPEIKDSFPLIAKKVKRFSPILREWDSLIDLLKLELKRPDKRAPKTYKWIKELLSDQE
3248098..3248358                   PHAGE_Entero_UAB_Phi20_NC_031019: tail fiber protein; IT784_15875; phage(gi100052)     1.05e-53            SalmonellaentericasubspentericaserovarTyphimuriumMESHSLTLDEACAFLKISRPTATNWIRTGRLQATRKDPTKPKSPYLTTRQACIAALQSPLHTVQVSAGDDITEERKCPSSAEVKYGT
3248280..3248291                   attR                                                                                 N/A                 TACTGTCCAGGT
3248325..3249488                   PHAGE_Salmon_epsilon34_NC_011976: Tyrosine integrase; IT784_15880; phage(gi221328640)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMSIFRRGEIWYASYSTPGGKRIKESLGTSDKRLATELHDKRKAELWRVDRLGDFPDVTFDDACMRWLEEKAEKKSLKDDRSRMAFWLAHFEGVRLKDVTEQKIYLAVNKMSNRKQLEIWKIKAAAAQKNGEPAPVYSAKPVTTSTKAKHLALMKAILRAAERDWKWLEKAPVIKVPSVRNKRVRWLERDEAKRLIEECPEPLKSVVKFALATGLRRSNIINMEWQQIDMQRRVAWVNPEDSKSNRAIGVALNDTACKVLRDQIGKHNKWVFVHTKEGIRPDGSRTPTIRKMRVDDQRAWNAACRRAGIEDFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLAPNHLTEHAKQIDSIFSDDVPNMSHMENKEGIKEA

#### region 7 ####
4403080..4403126                   attL                                                                                 N/A                 GATAAAAAAAACCCCCACATCATGTGGGGGAAGACAGGGATGGTGTC
4403288..4403695                   PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; IT784_21185; phage(gi526003640)     1.55e-96            SalmonellaentericasubspentericaserovarTyphimuriumMFHFKPTIAVAAILLSVSTYANANDTKTLQKQLKPWQPMEITTRENSLTVVLTGKEITSEAYSQLIMSGVCTPIWTHDAPASYLKNTKEISVLNEYKSFGYTFEDPLATCNEIAPLADKAAQTMLLSKTHTYTGK
complement(4403746..4403964)       PHAGE_Salmon_SP_004_NC_021774: Ogr; IT784_21190; phage(gi526003639)                  1.23e-49            SalmonellaentericasubspentericaserovarTyphimuriumMFHCPLCQHAAHARTSRYMTDTTKERYHQCQNVNCSATFITFESVQRYIVKPGEVNAVRPHPLPSGQQTMWM
complement(4404042..4405211)       PHAGE_Salmon_SP_004_NC_021774: tail protein; IT784_21195; phage(gi526003638)         0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMITGMTIDAGASLAPAFMLTLNSQDITSNFSDRLISLTMTDNRGFEADQLDIELDDTDGKVELPLRGAVLTLWLGWQGSALLNKGDFTVDEIEHRGAPDTLTIRARSADFRGTLNSRREESWHDTTLGELVSTIAKRNKLTASVADSLKQIPVPHIDQSQESDAVFLTRLADRNGATVSVKAGKLLFLKAGSALTASGKPIPQMTLTRSDGDRHQFAIADRGAYTGVTAKWLHTKDPKPQKQKVTLKRKPKEKHLRALEHPKAKPVSKKTKAKKEPEAREGEYMAGEADNVLALTTVYASKAQAMRAAQAKWDKLQRGVAEFSITLALGRADLFPETPVRVSGFKRVIDEQTWLISKVTHSLNNSGFTTGLELEVKLSDVEYKAEDDDG
complement(4405208..4405693)       PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; IT784_21200; phage(gi526003637)     1.34e-106           SalmonellaentericasubspentericaserovarTyphimuriumMMLALGMFVFELRTLPYQSMQHSKDYRWASNDRVGKPPAYQFLGEGETAIQLVGTLYPAITGGHISLLAVELMADEGRAWPLIEGTGKILGMYIIDKVSTTHAEFFSDGAARKIDFTLSLKRVDESLTAMFGDLNKQASELLGSAGNLTDKLQGALGGLTT
complement(4405708..4408083)       PHAGE_Salmon_SP_004_NC_021774: phage tail tape measure protein; IT784_21205; phage(gi526003636)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMQTASKTLSGDIRNTQKGLRDLNGQASKIDGFRKASAQLAVTGQALDKAKREAGELAVQFKNTTSPTRAQAQALDAAKRAASELQTKYNSLRTSVQHQRSELMQAGINTRTLSADERRLKTSISETTAQLNRQREALARVSVQQAKLSRVKERYKSGKELAGNMAAAGAAGVGIATAGTMAGVKLLMPGYDFAQKNSELQAVLGVDKQSPEMQALRKQARQLGDNTAASADDAASAQIIIAKSGGDAAAIQAATPVTLNMALSNWRSMEENAALLTGMKSAFQLSNDKIAHIGDVLSMTMNKTAADFDGLSDALTYAAPVAKNAGVSIEQTAAMVGALHDAKITGSMAGTGSRAILSRLQAPTGKAFEAIKELGVKTSDSKGNTRPIFSILKEMQRSFEKNNLGTSQRGEYMKTIFGEEASSAAAVLMEAASSGKLDRLTAAFKASDGKTEELVKVMQDNLGGDFKEFQSAYEAVGTDLFDQQEGSLRKLTQTATKYVLKLDGWIQKNKGLAQTIGIIAGGALALIGIIGGIGLVAWPVVMGINAIIAAAGVMGTVFSVAGSAIVTALGAITWPIVAVGAAIVAGALLIRKYWEPISAFFSGVIEGIMSAFAPVGEMFAPLAPIFDGLGEKLRGVWQWFKDLIAPVKATQETLDSCKNVGVIFGQALASALMAPLNVFNKLRSGVDWLLEKLGIINKESGNIDQTAARTNAAMQGNSYIPATSTYGGYQAYQPVTAPAGRSYIDQSKSEYNITLPGGVAPGHQLDRQLRDTLEQIERDKRARQRASMTHDF
complement(4408077..4408733)       PHAGE_Salmon_SP_004_NC_021774: capsid-scaffolding protein; IT784_21210; phage(gi526003616)     6.76e-155           SalmonellaentericasubspentericaserovarTyphimuriumMAKKVSKFFRIGVEGDTCDGRIISASDIQEMAETYDPRVYGCRINLEHIRGLLPDGMFKRYGDVVELKAEKIDDDSALNGKWALFARITPTDDLIAMNKAAQKVYTSMEIQPNFGNSGKCYLVGLAVTDDPASLGTEYLEFCRKAKHNPLQRFKASPENVFSVATLAELEFEDVPDTVLNSLADKVKAIFSRKQVSDDARLNDVHEAVTRRPDRLNPSR
4408817..4410259                   PHAGE_Salmon_SP_004_NC_021774: terminase ATPase subunit; IT784_21215; phage(gi526003615)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumNPNVANRNKGERKKPKKNFFSDEAIEKLEELFFDQSFEYQLQWYRAGLAHRIRDILKSRQIGATFYFSREALLRALKTGHNQIFLSASKTQAYVFREYIIQFARLVDVDLTGDPIVIGNNGAKLIFLGTNSNTAQSHNGDLYVDEIFWIPNFQKLRKVASGMASQKHLRSTYFSTPSTLAHGAYPFWSGELFNKGRASAADRIEIDISHRALAGGQLCDDGQWRQIVTIEDALAGGCTLFDLDQLRRENSDEDFKNLFMCEFVDDKASVFPFEELQRCMVDVMETWEDFAPFADHPFGSRPVWIGYDPSHTGDSAGCVVLAPPVVSGGKFRMLERHQWKGMDFAAQAEGIRRLTEKYNVEYIGIDATGLGLGVFQLVRSFYPAARGIRYTPEMKTAMVLKAKDTIRRGCLEYDAGATDVTQSFMSIRKTMTSSGRSATYEASRTEEASHADIAWATMHALLNEPLSAGSGMQPKSILEFN
4410259..4411305                   PHAGE_Salmon_SP_004_NC_021774: portal vertex protein; IT784_21220; phage(gi526003614)     0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMGKQKSRKAAAQKARAPQQLKASAPQKMEAFTFGEPVPVLDKRDILDYVECISNGKWYEPPVSFSGLAKSLRSAVHHSSPIYVKRNVLASTYIPHPLLSRQDFSRFALDYLVFGNAFLEQRHSVTGQLIKLLTSPAKYTRRGVDDSVFWFVENFTQPHEFAPDTVFHLLEPDINQEIYGLPEYLSALNSAWLNESATLFRRKYYQNGAHAGYIMYVTDPAQSATDVESLRDAMRNSKGLGNFKNLFFYSPNGKPDGIKIVPLSEVATKDDFFNIKKASAADLMDAHRVPFQLMGGKPENIGSMGDVEKVAKVFVRNELSPLQDRFREVNDWLGMEVIRFKEYTLDNPE
complement(4411653..4412537)       PHAGE_Synech_syn9_NC_008296: putative cytosine specific DNA methyl transferase; IT784_21225; phage(gi113200665)     3.48e-14            SalmonellaentericasubspentericaserovarTyphimuriumMKFYTPLRYPGGKGKLSYFLKDVIEQNSLNDGAYAEPYAGGAGVALELLLEEYVRKIYINDADFAVYSFWSSVINDTDNLCRLISNAKINMDEWRFHRYVISNPTEFTKLEIGFSAFFLNRTNRSGILKAGVIGGKAQNGKWRMDVRFNRDDLISRIENIANYNQRIVVTNLDALEFLEALNFLDSVDKADKNKTLLYLDPPYYIKGQGLYRNFYEHDDHVLVMEKLRDINFPKWLVSYDNAKEIKDIYSDFPQVEYSLQYTAQQKKSGEEVMIFSPEVVIPDTLKGVSMKISA
complement(4412607..4414106)       PHAGE_Entero_WPhi_NC_005056: gp98; IT784_21230; phage(gi33438941)                    2.75e-08            SalmonellaentericasubspentericaserovarTyphimuriumMNQIKSMNINKLLLDVDNPRFPTSAENQRDAIAKMLELQYERIYRLAKDIVAKGLDPSENILVYPSEEEDGFFIVAEGNRRVTALKLLLSPKLAPNERARKAFEKLKITQAKDIKIIDNCVLFDDDDYEHWVNLKHTGQNGGVGRVEWTAPEKARHMARMGKQSFGNQILTFLDLHSEFYKDILDKKKLLKITNITRLFGDLKVRDYFNLKSINGVLYSFQSLQRFKEQLKNILNVMVEEDEKGKACFTVNRIRSQDDRVTFIIEQKIKASDNILNKPWSLLDPNPVVSEGPDNIDPDDNDTPDTQGSRSPGGSSFSGEDGKHDRYYKDKDESDSKPEQDDEPKPKNKGKNPPKMDRNNLIPSYVKFNFRGHKKCSRIYNELKTHLTFDTTPNAISILLRIFIDLSVSAFVEDNKIEAKDSNRNPGLHDKVIMCAHFLRDNKKMTGSQCTAVITYSSQITKHNGSLQQYVHNPHLILSKEAVNTEWDNFELLLSLIWSD
complement(4414298..4414450)       PHAGE_Erwini_EtG_NC_047833: putative transcriptional regulator; IT784_21235; phage(gi100045)     6.31e-25            SalmonellaentericasubspentericaserovarTyphimuriumRRLQSVFPSTRVSVKKGSMTGVELMGVDKESDREALDSILQEDWENESWR
complement(4414473..4416758)       PHAGE_Escher_P2_NC_041848: hypothetical protein; IT784_21240; phage(gi100010)        0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAVKASGRFVPPSAFAAGTGKTFTGAYAWNAPREAVGRERPLTRDEMRQVQDVLSTINRLPYFLRSLFTSRYDYIRRNKSPVHGFYFLTSTFQRRLWPRIERVNQRHEMNTDASLLFLAERDHYARLPGMNDKELKKFAARISSQLFMMYEELSDAWVDAHGEKESLFTDEAQAHLYGHVAGAARAFNISPLYWKKYRKGQMTTRQAYSAIARLFNDEWWTHQLKGQRMRWHEALLIAVGEVNKDRSPYASKHAIRDVRARRQANLEFLKSCDLENRETGERIDLISKVMGSISNPEIRRMELMNTIDGIERYAAAEGDVGMFITLTAPSKYHPTRQVRKGESKTVQLNHGWNDEAFNPKDAQRYLCRIWSLMRTAFKDNDLQVYGLRVVEPHHDGTPHWHMMLFCNPRQRNQIIEIMRRYALKEDGDERGAARNRFQAKHLNRGGAAGYIAKYISKNIDGYALDGQLDNDTGKPLKDTAAAVTAWASTWRIPQFKTVGLPTMGAYRELRKLPRGVSIADEFDERVEAARAAADSGDFALYISAQGGANVPRDCQTVRVARSPSDDVNEYEEEVERVVGIYAPHLGARHIHITRTTDWRIVPKVPVVEPLTLKSGIAAPRSPVNNCGLPANGTATDMTPTPSEQAAAVLNLIDAGGIDWNDQYAVKVLRGALKAGAKPQNRQQRNRSPLKQDELAPSARLTKSQRDQISHIRFDLAQHGITPERWELDVLARGATVTYGEKKFSYAVADEWPGYTTETEWS
complement(4416748..4417023)       PHAGE_Entero_WPhi_NC_005056: gp83; IT784_21245; phage(gi33438935)                    2.41e-62            SalmonellaentericasubspentericaserovarTyphimuriumMSIRIEIGERYVVTSDSFQFILHEKKRAESGKNAGQEWLAVVGYYPKLSQLVSGLMHHDILTGSAKSFADLNAQVEQLSKRCSEAFGSYGR
complement(4417020..4417244)       PHAGE_Salmon_SP_004_NC_021774: DksA-like zinc finger domain containing protein; IT784_21250; phage(gi526003648)     1.62e-48            SalmonellaentericasubspentericaserovarTyphimuriumMPDNVDFIQEQQAELLERQINAARVKHCGASALVCEECDAPIPAARRAAYPSATRCVSCQSVFEAKNKHYRRTA
complement(4417244..4417546)       PHAGE_Entero_fiAA91_ss_NC_022750: hypothetical protein; IT784_21255; phage(gi557307616)     1.02e-64            SalmonellaentericasubspentericaserovarTyphimuriumMSCSRSVVLLNNALKIAVMKNGDLSLIQLGLDKEKREITESVIAIYQNELNLLSDVVNLLVKRAVFHKQISSVDELTKLTTEIASYCADEFKNLNDKRNW
complement(4417546..4417770)       PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; IT784_21260; phage(gi526003646)     1.34e-46            SalmonellaentericasubspentericaserovarTyphimuriumMHTVSENQCGIYALLLQQARTEAQADAATRFSSHLDAMIRHITKAELSRVEIVELLSQESEKFHNIGLSRGEVL
complement(4417834..4418334)       PHAGE_Escher_vB_EcoM_12474III_NC_049457: hypothetical protein; IT784_21265; phage(gi100014)     5.89e-123           SalmonellaentericasubspentericaserovarTyphimuriumMTVMTLNLVEKQPAAMRRIIGKHLAVPRWQDTCDYYNQMMERERLTVCFHAQLKQRHATMRFEEMNDVERERLVCAIDELRGAFSKRRQVGASEYAYISFLTVSQRRTLFMHAGLTEKEFNQPYWRINEESCYWRDALFRALRELFSLFEYAPTILTSVKPEQYLH
complement(4418504..4418776)       PHAGE_Salmon_SP_004_NC_021774: Cox; IT784_21270; phage(gi526003643)                  3.44e-61            SalmonellaentericasubspentericaserovarTyphimuriumMDAENYVIQYPLDAVHVDKFADLLGKPKTAVSEMVKANKLPIIELRDPCKPKARAGEKWVFIPEFNRAVREAFYNRPVEQRDAWLLWMGL
4418913..4419206                   PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; IT784_21275; phage(gi526003642)     4.05e-66            SalmonellaentericasubspentericaserovarTyphimuriumMKLSEKIKALREAEGLSQSKFCEIIELPLSTLKKYEGGNFEPGGTALLKITMHPTFQKYALWLMTDKTAPDAGQIAPALAHIGPESTESNHSAKRIG
4419276..4420256                   PHAGE_Salmon_SP_004_NC_021774: integrase; IT784_21280; phage(gi526003641)            0.0                 SalmonellaentericasubspentericaserovarTyphimuriumMAIKKLDDGRYEVDIRPRGRDGKRIRRKFERKAEALAFERYTIANASQKEWGGQRADRRTLSELLDIWWKYHGQNHEHGTKEFNHLLKTISGIGDIPVSRMSKRALMDYRSMRLRDGISAATINRDMYRLSGMFTKLIQLDEFSGQHPIHGLPPLAEANPEMTFLEKAEIEKLLNVLAGDDLLVALLCLSTGGRWTEVATLKPAQITNCRVTFLKTKNGKKRTVPISEELEKKVKEEASAKLFKVDYEKFCGILRRVKPDIPPNQATHILRHTFASHFMMNGGNIIALQQILGHASIQQTMAYAHLAPDYLQNAVALNPLKGGVTL
4420373..4420419                   attR                                                                                 N/A                 GATAAAAAAAACCCCCACATCATGTGGGGGAAGACAGGGATGGTGTC
complement(4420442..4420942)       cell-envelope stress modulator CpxP; IT784_21285                                     N/A                 SalmonellaentericasubspentericaserovarTyphimuriumMRKVTAAVMASTLAFSFLSHAAEVVTSDNWHPGDGATQRSAQNHMFDGISLTEHQRQQMRDLMQQARHEQPPVNVSEMETMHRLVTAEKFDESAVRAQAEKMAQEQVARQVEMARVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVAQWQKSSSLKLLSSSNSRSQ
4421093..4421791                   PHAGE_Altero_vB_AspP_H4/4_NC_047834: putative transcriptional regulator; IT784_21290; phage(gi100045)     1.08e-06            SalmonellaentericasubspentericaserovarTyphimuriumMNKILLVDDDRELTSLLKELLEMEGFNVLVAHDGEQALELLDDSIDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAILRRSHWSEQQQSSDNGSPTLEVDALSLNPGRQEASFDGQTLELTGTEFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPERKDGHPWFKTLRGRGYLMVSAS
