gi|00000000|ref|CP078119.1|  Neisseria gonorrhoeae strain 1291 chromosome, complete genome. 2177032, gc%: 52.56%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(491100..491810)         PHAGE_Haemop_Aaphi23_NC_004827: putative CI protein; KWY98_02455; phage(gi31544010)     2.50e-37            NeisseriagonorrhoeaeMSEFKDRLKEARKNKNLSQENLAKLAEVSQSTIAALESGRNKKATNIAKLAKILDVSAFWLETGEGSRNTPVLINPDLPHEVKDIHRPMMWSSNDPLPDDDYVFVPYLKESCFKGGAGAYEIPDYNGYRLPFGKSTLRRKGINPDNVFCCTLTGDSMEEKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYPDETASLDSLTVIGRVFWWSVLD
491926..492114                     helix-turn-helix domain-containing protein; KWY98_02460                              N/A                 NeisseriagonorrhoeaeMDEPRDLVLFLKEKMSSAAIAKEVGCSKEFINKIGNGERKNPRYQIVDSLRSLYRKNQNQPK
492194..492349                     hypothetical protein; KWY98_02465                                                    N/A                 NeisseriagonorrhoeaeMKKQDRNRLSKKDRRLIKKAMLKAAAKGCDEVYKIAPGLKDGFELLGKQPD
complement(492326..492514)         hypothetical protein; KWY98_02470                                                    N/A                 NeisseriagonorrhoeaeMPSDLSFILAKELIRSGSIRLSGSTAKGQAGELAVFIRTLHQKPEESEPNTDDEYLIGLLSK
492687..492914                     helix-turn-helix domain-containing protein; KWY98_02475                              N/A                 NeisseriagonorrhoeaeMNQKQTQCKQIVDYIRNKGCITSLEAYQNLKVTQLAARITDLEGRGFVFAKPKYKVGNCKNPVAHYSIAKSGIEP
493032..494096                     PHAGE_Haemop_Aaphi23_NC_004827: putative DNA replication protein O; KWY98_02480; phage(gi31544014)     2.79e-37            NeisseriagonorrhoeaeMMKPSESLRAAGRPIAYYPKLAKPLGGVNAAILFGHFFYWNDKTQYESGIYRTAEEIEIETGLSVQEQRTARAKLRERGVLIETEKRIEHRIYYKLNLDAFDDLMLQHSGGGESTAPKCNINSPELQNQHSGGGESTAPKCNINSPELQNQHSGSEESTAVIRTEDLTEDLAVYTPLPPNAGNGKGGLNADAFVSADAETCGRETGEPTSPKAESDSNGNGGLSGKPKNANVPRRRKTHGVPLQEIADLYNEVLGGRLPSVQVLNDTRKRAIANRWCEMLGTAAPNGKVRFGDKETGLAWFAGFFRKVAMNPFWMGENQTGFAVGFDWIFKAGNFVKILEWHPPKTNQAARGRA
494093..495454                     PHAGE_Marino_P12026_NC_018269: replicative DNA helicase; KWY98_02485; phage(gi399528354)     2.40e-70            NeisseriagonorrhoeaeMNRIEETEAVQSLASVGAEQNILGGILIEPTAIARCAILTPEKFYQAQHRIIFRALLDMAAANEPIDIITLNDKLEARGEAENAGGLAYLIDLNQNTPSAKNISRYVGIVNDRFVERGLLKASAAIEKIAVSKDGGTVAEKLSKAADELAAAGKDAVKRETKTFGQTVEDLIGGLDKRLDGVRFGLPTGLMKLDGMTGGLPDGNLIVIAARPSMGKTVLAENIARFALKQGKAVHFQSYEMSAVELARRGMAAECNIPMQNLKTGNLTQSDYANMPIYVSQAKEWKFDVNCDLLNVDELCFLAKEKKLTTGLDLLVVDHLHIMPRAGRDEVAELGNISRRLKNLAAELNIPVVLVAQLNRGNTKQADKRPNMADIRGSGAIEQDANIIIMPHRESYYDGNENPSIAELIIAKNRDGETGTVVCGWKGQFMKFEEEPDLAWQAPKHDEYDPYSV
495471..495722                     hypothetical protein; KWY98_02490                                                    N/A                 NeisseriagonorrhoeaeMRETCFYCNHADFKTNTGTPVRGFAKCAKARNAEEKATYYPRTNPCAAGAFQTASGAAVAKRAAALGEYPGIPEIENRVKTQI
495736..496222                     PHAGE_Burkho_BcepSauron_NC_049851: hypothetical protein; KWY98_02495; phage(gi100185)     3.21e-08            NeisseriagonorrhoeaeMTVRNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRAEVQETQMPPLKNVRRSERLRVRRRHGGRAACRHLRRLLHPRRRRQFCVGGRLCRRFVGKNAASGAGPAPKPDAANGGRRHLA
496607..496756                     hypothetical protein; KWY98_02500                                                    N/A                 NeisseriagonorrhoeaeMDTLLSIITALSFGGAATLAVWLLVEAADAVLRRKRDGKGEDDFDGFGY
496892..497437                     PHAGE_Pseudo_PS_1_NC_029066: endodeoxyribonuclease RusA; KWY98_02505; phage(gi985757683)     1.45e-07            NeisseriagonorrhoeaeMQNLPQQGSPAKARGKTRGGGSRRDDGGKAARIHPRRARRLPDIGRRPVDATGRGMRVTRLILPYPVSANRYWRIWRNRAVRSAEAAAYRETVRRIAQGAGAMPSEGAVAVYVRLIPKANKDGGANKTVIDLDNALKVTLDALQGVAYHNDRQVRRIAADYADEPVAGGGLAVEVGELDEK
complement(497766..498728)         PROPHAGE_Shewan_MR-1: IS110 family transposase; KWY98_02510; phage(gi24375433)       2.05e-08            NeisseriagonorrhoeaeMRNTVGLDISKLTFDATAIVGNAEYSAKFDNDSKGLNQFSDRLKSLGCQNLHICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKTGKQDAKLIAQYCRSAKESELVKRQKPTDEQYRLSRMTAAYAQIKSECAAMKNRHHAAKDEEAAKAYAQIIKAMNEQLEVLKEKIKEQTEKPNCKEGVKRLETIPAIGRMTAAVLFHHLTSSKFETSNKFAAFAGLSPQQKESGTSVRGKGKLTKFGNRKLRAVLFMPAMVAYRIRAFPGFIARLEEKKKPKKVIIAALMRKLAVIAYHVHKKGGDYDPSRYKSA

#### region 2 ####
1544043..1544054                   attL                                                                                 N/A                 AAATAAAAATGA
1544381..1545577                   PHAGE_Entero_P4_NC_001609: integrase; KWY98_08060; phage(gi9627511)                  2.37e-49            NeisseriagonorrhoeaeMAKIITPLSANQVKNAKPRDKLYKLSDGGGLALWVYPTGRRSWKLSFMQDGRQQTISLGRYPDFSLAEAREWREEVRRKRAHGENVVNKKVRADFAFEKVARDWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTADVVGCLRVMEARGIVDTLRKTKNSLKMVFAFAVGSGMMDINPVAQIGSGVFERVKTKNMTALSPSELPRLIDFLEQRNEFAVYAGRVHIHPVTRFCIYWLLLTMTRIREAALMEWSELDGEVWRIPAERKKERRGHDVPLSRAMRWVLDQARGLNVNGRFVFESVNFQGHINKESPRVAMRRSGLDTTAHGLRSLARTYLREVLKVYNDVAEKLLAHSLGTRTQTAYNRSELWEERKDAPERWGNDVLRLADNGK
complement(1545933..1546202)       hypothetical protein; KWY98_08065                                                    N/A                 NeisseriagonorrhoeaeMESSDVQGRMETLAFATAPKKGGIRKSGFGRVILIKSGHIVIHNADGDSFATGYGVIAADIVSPDLKTDFDIFFPPESLLRYKKIGKKK
complement(1546397..1547080)       PHAGE_Aeromo_phiA8_29_NC_048660: hypothetical protein; KWY98_08070; phage(gi100040)     8.78e-28            NeisseriagonorrhoeaeMDKEKVLDKIKKCLALGRSANEHEAAQALRQAQALMEKYKVNAEDIALSKVSEQKADRKMAFKLAGWQWGVANMIADIFGCKSYQRGKTMMFYGIGNRAETSAYAFDVVYRQISADRRKFLKTCRAGKPSHRTYLADRFCGGWIASAWETVKKFEMSDEEKAIMDGYKKKEYPDMAEARTRDAKSSILQGSKMEYEALTRGMESGKQVKLHYAVNGTGFVKQIGGQT
complement(1547091..1547627)       PHAGE_Mannhe_vB_MhS_587AP2_NC_028743: hypothetical protein; KWY98_08075; phage(gi970580043)     6.26e-13            NeisseriagonorrhoeaeMQTVATKPTAKQMLAAKRAAKESTRQERAVKRAGTVRNVDRNRLSARSKAQKENIARMLSGAKVSEDEALTCGIMMRLVAAKVRRYCGEHPGVFDGAAGSRQLERYIKPSEFHAVEIQPEACKALLQNYPAAAGNLGRRKQKKPRVRKRISPSRMARPNRKQSERRMGKGAKLKYRTN
complement(1547738..1547953)       hypothetical protein; KWY98_08080                                                    N/A                 NeisseriagonorrhoeaeMSYLEDVKNALRVIDNLCKEALKEPESLEGYIDEIRDKADEADTSLEFLKDVINYGISDLKNVIEVFEDCV
complement(1548005..1548496)       PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; KWY98_08085; phage(gi374531698)     1.66e-18            NeisseriagonorrhoeaeMTALTLYRCAADVQAALDYYFDSETEREDTLEAVIGQFEVKAQSVIAYIKNQEITEKMLEGHIRQMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGTFKASFRKSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNLQIR
complement(1548493..1548675)       hypothetical protein; KWY98_08090                                                    N/A                 NeisseriagonorrhoeaeMANIDLTQWDGKTIGAAANPEQGYINIIIGSDDLFINIEQAYAIHAALGEAVAEYEGGAQ
complement(1548815..1549501)       PHAGE_Pseudo_RIO_1_NC_021300: putative ssDNA binding protein; KWY98_08095; phage(gi508178031)     2.91e-10            NeisseriagonorrhoeaeMSLILSVKDESNFKPCPAGSHHATCIRIIDLGTQLVEYQNEQKRQHKILVQWEIDPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDFTPEERDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKHPDNAVFAFDLSDPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGRPEHPQGNAAPAEDIEDDIPFN
complement(1549570..1549731)       hypothetical protein; KWY98_08100                                                    N/A                 NeisseriagonorrhoeaeMSFHPETAYNGGGETEPYGPSPEEIKYRQSPETAETRRMTEKQAEGHIKSIIR
complement(1549728..1550003)       hypothetical protein; KWY98_08105                                                    N/A                 NeisseriagonorrhoeaeMKTRNIAFKFAVLAAVLAAGYAFGFAKGGGSRTAKGKPADIAAMRMALAQKQAQVAELSAEIWLEERHLNAEEEAGCRRVHGDAEVPEGKE
complement(1550119..1550451)       hypothetical protein; KWY98_08110                                                    N/A                 NeisseriagonorrhoeaeMKYYGTAAYGSPDWGMERYYAREDMRQALDGWEAENRILHESGLIEIAKKSAREFVRDADGEPYAQEDWETYLTEDASRIGKDTEAAMNYAIDEREWFALAENIGRLANS
complement(1550593..1550868)       hypothetical protein; KWY98_08115                                                    N/A                 NeisseriagonorrhoeaeMSYLDQPLKHGYGNGNGSGNGSGYGNGYGNGYGNGYGGVGGGGSGSGYGNGNGYSNGSGNGDGDGNGNGSGNGSGYGNGYGNGYSNGSGNG
complement(1550865..1551341)       PHAGE_Iodoba_phiPLPE_NC_011142: hypothetical protein; KWY98_08120; phage(gi197085698)     1.68e-32            NeisseriagonorrhoeaeMEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQHEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWWAKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVAQS
complement(1551374..1551574)       hypothetical protein; KWY98_08125                                                    N/A                 NeisseriagonorrhoeaeMNELISRINRFGTRAKDEQSLLLKVGEICRDAAATWTTRKSESINHTAFTFTVKKDGLKEKVMIVL
complement(1551772..1552185)       hypothetical protein; KWY98_08130                                                    N/A                 NeisseriagonorrhoeaeMIHLNVHYCDEIIRHAENDKYSLIGIFPDICHIPTPQAILGRLCLSVSFSAEGMDIQTMKTGQIFLEIVRNDDVISALEIPSYDGSDTEENVSFMLHQTISGLPVSDNDRIYVRMTTHNHILSESRPLSFSWLPYHS
complement(1552182..1552643)       PHAGE_Clostr_PhiS63_NC_017978: gp25; KWY98_08135; phage(gi388570654)                 4.67e-06            NeisseriagonorrhoeaeMGATLTVAVAACTVSTPTSAIPVTHIKCLRINGQIKCVKPISPNTTPAAEHIEHVRKNPRRKAAMDRAAARIADKIALKAGGETFVSLRMKKGFTQSELATAAGLPQPYLSRIENSKQSLQDKTVQKLANALGVSPLEVRAAFERRYEYMEQA
complement(1552660..1553097)       hypothetical protein; KWY98_08140                                                    N/A                 NeisseriagonorrhoeaeMELTVHFNAEQDLDRLFEKDEEAVGYLENVIAMIQADSAIFDGLYKNRYFREYGEPIGPIDLEVKPILSLWGKDIKVLRVRFDSEEAAGYRIIYAPCHEKQPNGTYIRRIDILAVVNKKTDEFDYQAEHPITKRIIKDYEELYSN
complement(1553210..1553926)       PHAGE_Salmon_BTP1_NC_042346: hypothetical protein; KWY98_08145; phage(gi100039)      2.06e-21            NeisseriagonorrhoeaeMPFIIDYQCLCAINSEIKMFSGEQLGQAISEAIKRKNVSQKEVADHFGVKQPSVSGWIKNGRIDKKHLDKLIDYFSDVVTPSHFGIETFRVLKSNEQSSIRFPRLNAEATCGAGTINDHYIEVVDYVTVAAAWAREKLGGNLNKIQVITARGDSMEPTIENGDVMFVDTAVEAFDGDGLYLLWYIDGLKAKRLQSTVGGGLMIISDNSSYRTETVRGEDLNAVRIIGRIRGAWRLSQF
1554001..1554231                   PHAGE_Aggreg_S1249_NC_013597: recombination protein; KWY98_08150; phage(gi100049)     6.21e-10            NeisseriagonorrhoeaeMSIQKAVDYFGNESRLARAIGVKQPTVWAWNKKGTPPPIIRCVQIEKLTGGAVNRKDLRPDDWHLIWPELAGDQPK
1554311..1554466                   hypothetical protein; KWY98_08155                                                    N/A                 NeisseriagonorrhoeaeMKKQDRNRLSKKDRRLIKKAMLKAAAKGSDEVYKIAPGLKDGFELLGKQPD
complement(1554443..1554631)       hypothetical protein; KWY98_08160                                                    N/A                 NeisseriagonorrhoeaeMPSDLSFILTKELIRSGSIRLSGSTAKGQAGELAVFIRTLHQKPEESEPNTDNEYLIGLLSK
1554804..1555031                   PHAGE_Burkho_Bcep22_NC_005262: hypothetical protein; KWY98_08165; phage(gi38640331)     3.16e-05            NeisseriagonorrhoeaeMNQKQTQCKQIVDYIRKKGCITSLEAYQNLKVTRLAARITDLEGRGFVFAKPRMKAGGRGKPVTHYSIVKNGAEV
1555028..1556026                   PHAGE_Aggreg_S1249_NC_013597: HNH endonuclease; KWY98_08170; phage(gi100046)         3.96e-17            NeisseriagonorrhoeaeMSARLMGMAFKTGIPRGQRFVLVKLCDCANDEGLCYPSQETLAEDTGFAETAVRQHIKWLKDNNFIKSARRQRGRERKSDIYRINVALLEKCYAEAAKRKAARQAKMWEEPLDYEPSDFEPSDYEPSDFEPSDYEPSDFDAKNHQILSGEPSDFALRTIRFCAKNHQILSGEPSDFDGSLYVEPSVEPSGSNARGARAPAGPHPAKPQTAPPETAPAAKAKKTGRHETELSLLADYGITGQVAADFLQVRKAKRQPLTETAMRLIAADAEKCGMTALQAAEYAIASGWGSFRADWLQNKTFGRSGNRGGPTHNQTAAVLDAGSYGDMPTTDF
1556040..1556819                   PHAGE_Vibrio_X29_NC_024369: IstB-like ATP binding protein; KWY98_08175; phage(gi658311189)     8.71e-44            NeisseriagonorrhoeaeMALRNASDFLGAYGGGVRVERRQCAEHGGYAAKSVLRGVWTGCPACRKLEAADEMAAYAETLRRGAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMARAKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGDMLRTVKDSFGGGGEAGAVGIFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLMPMLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWESYRA
1556889..1557095                   hypothetical protein; KWY98_08180                                                    N/A                 NeisseriagonorrhoeaeMREGAECGRAGEALPANQSLRRRGVSDGIGGGSRKKDGGAWGISPRNAPNLSGKAGKTLWEYPSLPEI
1557134..1557628                   PHAGE_Burkho_BcepSauron_NC_049851: hypothetical protein; KWY98_08185; phage(gi100185)     1.56e-08            NeisseriagonorrhoeaeMTVRNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRAGAPKFKKLKCRRYEKMYAGLKDCGFDGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETAGGGI
1557844..1557993                   hypothetical protein; KWY98_08190                                                    N/A                 NeisseriagonorrhoeaeMDTLLSIITALSFAGAATLAVWLLVEAADAVLRRKRDGKGEDDFDGFGY
1558129..1558674                   PHAGE_Entero_cdtI_NC_009514: holliday junction resolvase; KWY98_08195; phage(gi148609431)     1.22e-07            NeisseriagonorrhoeaeMQNLPQQGSPAKARGKTRGGGSRRDDGGKAARIHPRRARRLPDIGRRPVDATGRGMRVIRLILPYPVSANRYWRIWRNRAVRSAEAAAYRETVRRIAQGAGAMPSEGAVAVYVRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADYADEPVAGGGLAVEVGELDEK
1558941..1559348                   hypothetical protein; KWY98_08200                                                    N/A                 NeisseriagonorrhoeaeMNQQEFEFMNDLARAFERRYRDTRSLNRCFSIEGRYMGEEACPHKPEIGLRYGEDAMFLTLQAWAKVDAPQQEAVRISFGIGAKSQAAYEERLQAEIRRRGEGPLHLQTDLGLAAWYRAIRQAAGNDFDLLFEKV
1559570..1560088                   hypothetical protein; KWY98_08205                                                    N/A                 NeisseriagonorrhoeaeMSKAINKLNEKEKEKEKEKIRLLFAQREKFYRILENPEQGFTPPTALLKSGETCFLIDYVNMGEVVTERVRTYTGTRLKLGSTPVYLGGGKSVANEKQKNVAYGELVLTNFRLIFVGNMRSIDLPLDKINSVECFQSSIRISQSGKNKPIFFNTVFNPQLWKEAILVLSDKK
1560409..1560630                   hypothetical protein; KWY98_08210                                                    N/A                 NeisseriagonorrhoeaeMNNSVQISNISIHQTEIGLFSLNDLHRASGGEDRHARLKAAANALEALSAHADAEHAEKIRPILPEIRNLSAV
1560923..1561372                   PHAGE_Entero_Sf101_NC_027398: terminase small subunit; KWY98_08215; phage(gi849122263)     6.12e-31            NeisseriagonorrhoeaeMSGTKRKLGRPTDYTKDMADKICEKIANGRSLRSICAEDGVPPMKTIYRWLEANEEFRHQYARAREKQADYFAEEIIEIADSAQAESAAVSKAKLQIDARKWAASKIAPKKYGDKSELDVKSGDGSMRAAVRLDAEEYRKIAEDVLRRV
1561434..1562855                   PHAGE_Acinet_YMC11/11/R3177_NC_041866: minor tail protein; KWY98_08220; phage(gi100056)     0.0                 NeisseriagonorrhoeaeMALGQFDDVETSVIRSLSSASLYMFTRRMFYQRRGYVWQRANHHAPICNALERVFNGETKRLIINIPPRYSKTEIAVVNFIAWAMGRVPDCEFIHASYSAALAVNNSVQIRNLVQHEEYRAIFPDLALAGESGHHWKTTAGGVMYATGAGGTITGFGAGRHREGFGGCIIIDDPHKADEARSEVRRQNVIDWFQNTVESRKNSPDTPIILIMQRLHEKDLAGWLLDGGNGEEWEHLCLPAIQEDGTALWPEKHDIETLRRMEQAAPYVFAGQYLQRPAPPDGGTFKPDNLQFVKALPAGNIRWVRAWDLASTANGGDYTAGGRLGVTEDGRYIIANVVRGRYGADERDRILRNTAQKDGVKTKISIPQDPGQAGKSQTLYLTRQLAGFSVSAGPESGDKVTRAGPFAAQVNIGNVMVLDDGTWDTDALIAEMRMFPNGRHDDQIDCLGRAFGELLDTRTGMIDFLRSQVEAVK
1570425..1570436                   attR                                                                                 N/A                 AAATAAAAATGA

#### region 3 ####
1565605..1565617                   attL                                                                                 N/A                 AAACCGAAGATAA
1571636..1572490                   PHAGE_Caulob_magneto_NC_019407: putative tail protein; KWY98_08280; phage(gi414088603)     8.80e-20            NeisseriagonorrhoeaeMKAATKELIGLLHGGDEFQMADLYTITLSGGRVLRHTGADMPVVWDGQAYGAHELVIKRGATRTAVGLEVDSNTLQISAAPDYRLEGLQWAEAALGGVLDGARVRIDRVFFDAGLRPVGAVNIFSGRVSDVSGGRSSVKVDVKSDIELLNVSSPRNIYQAGCMRTLYDDGCKVNREKFTVNGRVTENSRTGTVLKHNLTQPDGWFSQGVIKFAGGRNAGLSRTVKAHGGNTFELALRLPYPPQAGDAFKVYPGCDKRRDTCKDKFDNIVHFRGFPFIPSADTVV
1572492..1572923                   PHAGE_Dinoro_vB_DshS_R5C_NC_041921: capsid decoration protein; KWY98_08285; phage(gi100066)     1.49e-15            NeisseriagonorrhoeaeMPSETDLRARIVEEARSWLGTPYHHHAMVKGAGVDCAMLLVAVYGAVGLLPEGFDPRPYPQDWHLHRDCERYLGFVTQFCRETESPQAGDIAVWRFGRSFSHGGILAGGGKVIHSYIGRGVVSDDIGQAELIGRGVRFFTFSF
complement(1572951..1573229)       PHAGE_Vibrio_vB_VchM_Kuja_NC_048827: terminase small subunit; KWY98_08290; phage(gi100071)     4.58e-18            NeisseriagonorrhoeaeMESQTFASVFDALCDTPAEAANMRLRAGLMMHIADTVRENGWTQKQAAEHCGLTRPRINDLLNGKIDKFSLDALVNINAGLGQCISLSFAPA
1573469..1577614                   PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381: central tail hub; KWY98_08295; phage(gi658311483)     5.53e-11            NeisseriagonorrhoeaeMGGKSSTVTSAEERILSLQVQRSSQGLTLPVIYGRTRVAGNLVWYGDFVTIEHKTTTRRGGKGGGGVKQVGISYTYEAAVMLALCEGEIQGVGRVWRDKEKFDSPAQLRLTLMRGGDEQPLWTHLQQAKHQGQALNYSGTAYLCSPNYELTKSAQIYQHNFEVIGKSGYSGNIPDANPREIVLDLLTNQRYGCGFPSQNIGDTDRYSNYCRAVGIFLSPAYTEQGEAQRNISELLEQTNSAAVFSQGRLKIIPYGDGSHSGNGAVYVADNKAAYDLTDDDFIVSGAQDPVKAGRKTNADAFNQIQVEYLDRDNDYNVAIAEAKDQANIEQYGLRPKDAVKMHGICDAKVAQKVAQQLLQRALYVRNEYEFKLGWKYCLLEPMDIVTLTDAGLGLNKTPVRITEIEEDGEGVLSVKAEDCPAGVYTVSEYPTQPSSGYSADYNVSPGNAHVPVIFEAPLQLTGGEPQIWLATAGGGMWGGAEVWVSADGDSYTRVGAVNRKARFGALTADLPDGAVFDRTNTLGVEISAGQLTGGTEQDSRDLLTLCYVDGEFLAYADAELKGVGRYTLGNLTRGAYGSAVNAHAAGSRFARIDEALFKYAVPRNWIGRTVWVKLVSYNVFGGGIQDLAEVPAYSYTIEGAPLGQIQNLRLTSSWAYGKEAVIAWDKLDGADTYDVEIYAGGSRRRLRAVDGIVDNSYTYTQADMKADGGQVRGIVFKVRGRAVTGKTGNWAQIAAQNPQLQALQGISIDSGLRQAFFTCQKPAEEDFAGIIVWVCENAACPAADANKAYDGAETFITIAKCGGKPLEKGKTYYLRAAGYDSFGKDNLKISGSISFTVYDVSATDLSESSLNKALRDKINLIDGNGAGSVNERVEAVRSTADGNAAAVQTHARSINGLEAQYTVKVDANGKVAGFGLATTPKNGTPESKFIVNADRFGIGAAGKADVFPFVVDTQKNRVGINGELVVNGKAVVDKLNAGDIHGGKIAADTLDANRLKAGSVTAREIGAAAVTADKIGANAVTADKIQVADLSAVSSNLGSITGGSLNIGGGNFTVSSDGILTADNAVIRGRIEADSGYFNGTVRASSVEGDVLRAHRLRWTEGNVWVLDLDKDPLPRVLIPNFYVVSETFGNNRVQAKLLLNGGVLAPREVRETENYTNYIWRGRTFGRYEDLPPRARGGGDYTEQSGSRYRTRLEYQIQVIPAGKPVSLKLSLASHESVFSPFVSVSYLAQSDYEYKQLLGRMVWRTFAESFRYDSKKQIYLGGDRRVHDYQNQMYKHWNAYGGLLQLPDDIYGISFEYRPFTNADWSTMLAFDRSDKFVVVKKYRGHAPQQYSLFQEEFNTAVPKSNLLFFVEHWWQYIELRNIRVLIPESRENEVWQVG
1577726..1578031                   PHAGE_Burkho_AP3_NC_047752: hypothetical protein; KWY98_08300; phage(gi100027)       1.25e-06            NeisseriagonorrhoeaeMIEDKKIVALNFAVEDGMTGASAAYHVVEHIGADYRNGYVTATLNGYVSENAFKSGKRYLLARTLDFQETDITAPDPGWVYRKALEGAAGIPKDAQPVYAE
1578102..1578572                   hypothetical protein; KWY98_08305                                                    N/A                 NeisseriagonorrhoeaeMLRFLTERRFLPAGFQAWLFGTATRVLEAVSGLGLSGYAAVFALAPDEIYAWRIYYKFQDIPEAWTVGVLAAAGLLQTALLFARGVRACVASAYLLLFSGFVWFLVSVAFWGAYPPLNTGMVVPPLLAFFCALAGNNALRFLFSAQKSRGLADEGS
1578573..1578905                   hypothetical protein; KWY98_08310                                                    N/A                 NeisseriagonorrhoeaeMGFLQFGLLFAAAGGVLGAVWASLERGRPVQAVLEAFISAIAAAAAAERFVPLDQAWTCAAAGVFAGMMTGHALDTVRALAPKVLRGYLGGLAEKLTGVKDGGSSDGKD
complement(1579273..1579620)       PHAGE_Strept_EJ_1_NC_005294: transcriptional regulator; KWY98_08315; phage(gi39653708)     2.91e-11            NeisseriagonorrhoeaeMYIPERGDIFHLAFDPAAGTEMKGGHYAIALSPRAYNRATGLVYACPISQGRAAAARSGGMISTLLGAGTATQGNVHCHRMKALDWKIRRAAFRETVPDYVIEDVLARIGAVLFD
complement(1579620..1579856)       AbrB/MazE/SpoVT family DNA-binding domain-containing protein; KWY98_08320            N/A                 NeisseriagonorrhoeaeMLRLQKWGNSAAVRLPARLLTALNAKIGDALETEIRNGELLIRPVKRYRLSDLLAETEAAPPRAEGWEEMPDVGQEGV
1580063..1580602                   PHAGE_Pseudo_vB_PaeS_SCH_Ab26_NC_024381: endolysin; KWY98_08325; phage(gi658311460)     1.16e-62            NeisseriagonorrhoeaeMKELKWIEEARKYLGAHEKVNGKSNPVLLAMLQEMGNFNQEQKAWWKETDTPWCGLFVGHCLGKAGRAVIRDWYRAKAWSMSGLTKLEAPAYGCIAVKPRRGGGHVFFVVGKDAEGRILGLGGNQGNMVSIIPFDPADIDGYFWPSKLIGGKAVPSSPAEGRYRLTAAAATAKQGAGEA
1580603..1580947                   PHAGE_Entero_vB_KleM_RaK2_NC_019526: hypothetical protein; KWY98_08330; phage(gi422936900)     3.73e-09            NeisseriagonorrhoeaeMIGALLKNWKPLLILSAIAFFAVSWQLDRAAQYRRGYGAAVSEVSERLKAAAVEHAEHARKSSAAYQAQKAAREEKERVRYVQTLKIIEKPVYRNACFDADGVRELNAAVDDGG
1580931..1581104                   hypothetical protein; KWY98_08335                                                    N/A                 NeisseriagonorrhoeaeMTTAVKPPADLVRPCPKLPHLEGNTGADVLPWSLQVIGLYKDCKARHGALVRALGAD
1581446..1581595                   hypothetical protein; KWY98_08340                                                    N/A                 NeisseriagonorrhoeaeMNAEGFCEKQTACRPDGRRNAGDRADLKAFEFAEQELANYREMLKRYAV
1581625..1584669                   PHAGE_Mannhe_vB_MhS_1152AP2_NC_028956: tail length tape measure protein; KWY98_08345; phage(gi971760502)     7.81e-74            NeisseriagonorrhoeaeMSDLEAKVRITVENHTKQGFDSAAADADKAAEKMRSSGDNAAKGFKAAIDSMHETMRNLHADVKAGFEAAGNQAQQASEKVRAEVGKIGSGLSGLTKLLAGLATADFAKSVLDTADAMQSINSQVRQVTSSETEYLAVQQQLLDTANRTRASLESTANLYVSTSRALKDYGYTQQEILKFTEAANNAMTIGGVGAQQQAAALMQLSQALGSGVLQGDEFKSISEAAPILLDTIAEYMGKSRAEIKKLGSEGKLTADVIFKAISGASEKFGEQAAKMPVTMGQALTVFSNNWQSMVSKLLNDSGTMSGIAAVIKLIADNLNLVVPIVAGFAVAVAAAVAPTLALNLALLANPFGIIAVAIGTVVGLIAKFGDEIDVFGGGWSNLSDVIRAVWQIITETVGEAVGTVKSWFDGLTGRLNEGAGGWPSLFGRVMSVISSAIGAYVNVYINIFATGWMLIKEAANDMPQFFANLGKAIGNVFISAIERMINKAVGMINSMIDFANKAASMAGISGIGKLNKVRMGRMDDGGLGERIHDSLTKDRAGAMANAVRERAADIHEADALKGRGGGGHAKTARKKPGANQGGGKGGKSRSGGPGAAKDPMQAWEGEIKARKLAHREMQRETLAHQEWDLAREAEYWRAKLATVDANGKTGVKIREKILTLEDQLSKQSTEAKMNQAAEWEKLDKHKLEMEKDAADQALADGRISQLERLDLEIEFENRRYRIAYDALQERIALAEQDPAYSQAAIGKLKAQMGELGRGHERTQAKNEGKRENQRRKDAPNVMEMLQDGGKNVWQEAQQQMGQAFTAMLARAQNFRQAMNGFFKSMGQTFIQEMVTKPLTGLMRRMVQESAIYKMIFGTKETLETAAAAKTAATKATETTAVVSSNAVQAASGAAASQAHIPYVGPILAVAAMAAMMSAVMGLMGGGGSQTTTTTTRIPSAAGGWDIPAGINPLTQLHENEMVLPAEHAQTIREMADQQGGGSTVIINSTGGDFIHKNDLAKLLKQMKRDFKFV
complement(1584729..1585208)       DUF4760 domain-containing protein; KWY98_08350                                       N/A                 NeisseriagonorrhoeaeMTDNLIQIATPILTVIGVFVAAYGIMRNTENAKKRATIDMIMAERNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAILTVLNQREFVCAGVLGGALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQEFEAVARKWKKKPLKTK
1585478..1585490                   attR                                                                                 N/A                 AAACCGAAGATAA
complement(1585550..1586539)       PHAGE_Mannhe_phiMHaA1_NC_008201: integrase; KWY98_08355; phage(gi109289985)          3.96e-101           NeisseriagonorrhoeaeMATITQRNGKWRVQIRMKGVSRSATFERASDAKAWAARIESQIMDGIQGNAPRNTIFADLIRRYLSEVTPSKRGAREESYRIGRALKTPLAKVRLADLRPQDFADWRDQRLQEVSPTSVGRELTTLSAVCEHAMKEWGLLRENPVRKISKPKKSRARTRRPTEQEIADICAALLYRPNEKPKMAVQRVAVAVLFAIETAMRAGEICGLKWADVNMRRRIAHLPITKNGDSRDVPLSLRAAELIEQLRGIDDTWVFSLDAKSLDVLFRRARDNCGIQGLHFHDTRREALTRLSKKVPVEVLAKISGHRDLRILLNVYYRPDMADIAKMLD
complement(1586799..1586987)       hypothetical protein; KWY98_08360                                                    N/A                 NeisseriagonorrhoeaeMADGRKGFFDAIIKINIFFFPVKTPTLGAANPIAGGSTRFRFGAEQMAVLYVPFCVLKHIGR
1587228..1588262                   PHAGE_Prochl_P_SSM2_NC_006883: phosphoribosylaminoimidazole synthetase; KWY98_08365; phage(gi61806048)     8.80e-82            NeisseriagonorrhoeaeMSTSLSYRDAGVGIDAGDQLVEKIKPFAKRTMRPEVLGDLGGFGALVEIGKKYQNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLFFLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVGVVEKENVITGLSVGAGDMVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLREAVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPKNTVAQIDAESWELPKLFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVRSFLSGQGETVYRLGCIRERQGNEHQTQVA

#### region 4 ####
1811170..1811418                   PHAGE_Haemop_HP2_NC_003315: hypothetical protein; KWY98_09375; phage(gi17981828)     9.79e-07            NeisseriagonorrhoeaeMFHLEGLLQENLPIPEAQSIEVNRDNPDYADAVLWTMVEADDAALTGQVRFNVSWPQHILNRVDACTAARHETRAVFWRKPP
1811625..1811646                   attL                                                                                 N/A                 GCCTGCGCGGGAATGACGGCGG
complement(1811865..1813115)       PHAGE_Haemop_HP2_NC_003315: tail fibers; KWY98_09380; phage(gi17981847)              8.39e-67            NeisseriagonorrhoeaeMEKTQFGRHPRRRDRVLSQSRPKPRRLSQSRRHDLCTKHLLDLYRALGNTNKLPDLTRTDIGITAWFPSDQIQTGWLAFDDIRERVTESAYPELYRLLTEKYGRIQNVPQAEDRFIRNAGNGLAVGTKQEDEIKRHVHKVFSHWANHPDAAAVGYEDRNERQRSALVSTWTGGDLNDNGFLTPRLDSKMATGGAENRPKALVLKLCIKAADTLGEAVFRIKSHGETANAGALDASRLAQGLQEKADRDHTHTTAQIQGLDEKISAAVAAQFTRQTIGGVDIVRFPDGTMIQTGSYRFARGGSPIGNEVVFPIAFADGNVKCFVSERHSGRVNGERQHNWLFIRAKNHAAAIITNWYESSCDWMAIGKSASGNAASPTPIVPEIPEIDEEPQRESGRSSTGLRNPRRHRGLDFPVGS
complement(1813547..1814052)       phage tail protein; KWY98_09385                                                      N/A                 NeisseriagonorrhoeaeMANATEQNQFDQAVRLIESGDSVVVGPGAPVNQPLQALANRTLLFKNQTEALQTASDTKAAPSHWARPGKSPQQAKTPSQKTATPTPSTPHAPTAPASSDTMPLAKPKTPPPPPKPSKPRSTKPAPPPRPPTSKSPSPTTKPLPAKKPLPPKHNSKAASGCPPTRRTGA
complement(1814092..1814319)       PHAGE_Burkho_phiE255_NC_009237: gp25, tail fiber; KWY98_09390; phage(gi134288819)     1.77e-11            NeisseriagonorrhoeaeMFDGSRTFGRRKGDWAEYRIVLTRPVSIRQTARIRAMLAEIAPLRCELTALDYRNHPHRWNGKIRFNGEYGFGTT
complement(1814279..1815526)       PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; KWY98_09395; phage(gi937533298)     6.82e-48            NeisseriagonorrhoeaeMGNSRLSQLPAPAAIEETDFEGIFARKKAALTALCPESIRETVAQTLELESEPLTIDLQQQAYQELLVRNRINEAVKANLLAYAQGSDLDHIAAQYGLSRKTIRAADPDANPPVAAEYETDDAFRARVQAHPEKYAAGPRTAYEAHAIDAHPQITHARAVRRAAGTVEVYIKTQSGTPDETILTAAREYLSAETRRPLCDNVQVTAAQPKDAAVEYSAEYHPAANIQAERQTACEALDNLWRQNAHIGASVALSKIIGALDTPGVKKNHTAQPRCRHRMRQRRIHPNHVHARARINEQHRPREQQPPATRTGKADRTRNCRRLPPTRPRIFTLSRLRKKHRHGRGLGLCRNRRSPPQPHRRLCRNPRPKRHAVRHPRPLPHLAAGRNPNYRTRRRVQVGRLGLVRRQPHIRQAQG
complement(1815547..1815873)       PHAGE_Pseudo_phiCTX_NC_003278: baseplate wedge subunit; KWY98_09400; phage(gi17313236)     3.51e-21            NeisseriagonorrhoeaeMTDAENGRGQDTLAHIAQSIRNILFTRIGTRLMREEYGSFIPDLIDMPAGHAAIALIHQAAVTALARWKPRITVRRIQADTADLAAGKIKLTLDVTLADGGERTYRIK
complement(1815870..1816394)       PHAGE_Mannhe_phiMHaA1_NC_008201: baseplate assembly protein V; KWY98_09405; phage(gi109289954)     2.66e-29            NeisseriagonorrhoeaeMTDRQIDNLIKPATIADTDPASNRVRAQHGGITTDWLPYIVPFAGGVSVWRIPSVGEACTILSPAGEPENGVVLCCQASDRYPAPSADPAETVVRFPDGTHIRYNHNSGAMELKAVTSLTIDTPQTTITGHLTVNQTTTAQGLLTYQNGMNGQGGSLSEHTHPDDSGGTTEKPQ
complement(1816579..1816791)       PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766: hypothetical protein; KWY98_09410; phage(gi971741518)     7.59e-13            NeisseriagonorrhoeaeMELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPDTETRRADMPLEKWRQFLDWIEKTNAV
complement(1816846..1817498)       PROPHAGE_Neisse_MC58: IS1016C2 transposase; KWY98_09415; phage(gi15677271)           8.28e-50            NeisseriagonorrhoeaeMKITHCKLKKEVQKEPLRSFVPEVTARSAADILGIHPDSAALFYRKIRTVTNHRLALAADEVFEGPAGPGASCFGGRRKGRRGRGAVGKAVVFGIPKRNGRAYTVAEDDAEPETLLPAVKKKSCRTVLFMPIARAAAASRTRAVLPVAASTVPRNLQTVGTTLTALGTFGIRQNAPCGNTTESIVNLSRRSGNANFDLTSAHRPGSKSCGIGVEFAG
complement(1817520..1817804)       hypothetical protein; KWY98_09420                                                    N/A                 NeisseriagonorrhoeaeMNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGECPGGHYRHSENGITLYDFIFFGGKPADEARFAAVLTETCRRAVKKIGSVPD
complement(1817841..1818104)       hypothetical protein; KWY98_09425                                                    N/A                 NeisseriagonorrhoeaeMADILPSDKRRQPPKTKGNPINIIEQETKRTELRKIDAEIAKIIADAHKINAESVKIAQESRWYPMMAATGLVTAIAAVLALIFKFA
complement(1818124..1819403)       PROPHAGE_Escher_CFT073: prophage P4 integrase; KWY98_09430; phage(gi26249391)        3.44e-47            NeisseriagonorrhoeaeMAAHNKLTQKQIEAAKADGKQSKLADGGGLYLLLHPNGSKYWRMRYRHGGCEKTLALGVYPAVSLKQARELARAARAQTAAGIDPVAEHHRTRPGSGRSLPEIARAWYGSRQGQRADNTLEGDRRSLAYLTDYYKDNTDINDITTAGVSKFIEHLNRINIPACARRTVQILAQIWDYAVQRGIITDERRNPATTARPLLNTSKPKPQPHIRPDELPDFYRALQTAHDLHPYARPLLLLAALTVPRPSALLSARWQDIDLTTRLWHIPAADMKTKHPFTVPLSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTPANPNTPCTDSATSSPTSAPPEKTPSQQTSPLATSAAPPSNAPASQACTTTPPTATASKSGANSPNGTAAATAKHTKPPPKTLAIKPAA
complement(1819612..1820391)       ferredoxin--NADP reductase; KWY98_09435                                              N/A                 NeisseriagonorrhoeaeMAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSRLGFYEGKGFIWRAYSVVSAEYADTLEYFAVLIQDGPMSALFAKMQQGDTILLDKNATGFLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDRLAALSEHPLVGEYGHSFRFVPVTTRAANPSGLSGKRIPELLKNNSIEQALHTKLTPESTRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF
1821291..1822349                   PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; KWY98_09440; phage(gi399528790)     8.04e-19            NeisseriagonorrhoeaeMSLRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICAASYDARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLSPDEAYLDVTRNFKNIPYAGEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHKVMAFLETLPLGKIPGAGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGRYGYRLYDLARGTDEHPVKAERERLQISTEITLPEDLPLGQAAGHLPHLAEDLWRQITRKNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLMARVPPQTEDAFRLIGIGVGRLVPKNQQQDLWA
1827013..1827034                   attR                                                                                 N/A                 GCCTGCGCGGGAATGACGGCGG

#### region 5 ####
2057484..2057498                   attL                                                                                 N/A                 CAAATGCCGTCTGAA
complement(2067797..2068006)       PHAGE_Mannhe_phiMHaA1_NC_008201: DksA-like zinc finger domain containing protein; KWY98_10740; phage(gi109289947)     3.82e-10            NeisseriagonorrhoeaeMTDFADRASEREAEFLVEALAKHQPPSENTAGFSHCEDCGDPIPEAKRKAVRGCTRCVVCHEYIQLKTK
complement(2067999..2068220)       hypothetical protein; KWY98_10745                                                    N/A                 NeisseriagonorrhoeaeMPSDTPIKTVAVAEIPPVPSGLLVEYERPERPAGGSPEQLLNHAVRYGGYYRKLEIQIEGWQNWHTKGRLKHD
complement(2068294..2068581)       hypothetical protein; KWY98_10750                                                    N/A                 NeisseriagonorrhoeaeMIEFVRAKKRLLWAFVLLLAWACGYRYAADKAEAEQTALIAAYRHSSMVAAEQYALQLKKAQDERQRWYDFSQKQSTDLAAALSELDKTRNTLQE
complement(2068701..2069135)       hypothetical protein; KWY98_10755                                                    N/A                 NeisseriagonorrhoeaeMALMETTDDLFSRTLAILKEANQPQEELLPQLSQLYQKEIGLVPEVDKKTNMIFLETFQSSISQSSILSDIRSLLNEKKYIAKRIKENAEEMYFFSQPAALLVYWLIEKVGADEVWKKWPLPAYNKNLKFICTDLDKQPSHELF
complement(2069336..2069710)       hypothetical protein; KWY98_10760                                                    N/A                 NeisseriagonorrhoeaeMSDIDDFKSYLESHQAAFSAWGRFVAEEIQNQLSNVISPVPVANFLKIEAKPGVKEISSALAKIGRKNYTSPQTQMTDLVGVRFVALLAEHIQIVCEIIESSSQWNAKVSKDFADEIQQNPKAI
complement(2069707..2070747)       nucleoid-associated protein; KWY98_10765                                             N/A                 NeisseriagonorrhoeaeMKKIITHRIYPKNENRERVESKISTHLIDLPITARRTLETRLTKALGNKSHGIEMSVVNTAENSFFQIAAAIQLKEEAEFIEDSAQFAHMLTDAQLNTNAPGGILLVLKGRVGDTGKPFLCVIKAEPQDGFRTKEEDDFITIEFLEELLLTDSARLFKIGFLVAETVRPLEQIQSGNYRAFLYDHLMTQTETRPAASYFYQVFLGMSIAASSRKLTQDFFEWTRNFIDNSDLSDDAKLDAHEALRVTLKSAEATISVNNFAQNHLPQEKRTTYTEFMVEKDFPQNAVSKDIEYIKTRLRKRRSYGFSNGVVILTPPEHTQDYMEIAPTEDGEYTVVLIKGQLQQQK
complement(2070981..2071361)       PHAGE_Pseudo_Dobby_NC_048109: hypothetical protein; KWY98_10770; phage(gi100035)     9.27e-14            NeisseriagonorrhoeaeMEKTSLFGKRLKEERIKLGLNQAEAAEKCGFSREMWGKWERGENRPSSEKLFSFSKIGIDIDYVMHGRRGETAAMPSESLSAEEKELLALFRQLGSGSRKELADYAAFKLVVEKKAQTALGKVSNG
2071633..2071863                   PHAGE_Pseudo_B3_NC_006548: hypothetical protein; KWY98_10775; phage(gi56692585)      1.63e-05            NeisseriagonorrhoeaeMEKPLNFKPIPYLQTRGSTAVWFKRNGVCKTHRAKHFNLERTAVEHPLRGKLKGNFGKSHEAAVKLGLKEDADGDE
2071850..2072134                   PHAGE_Burkho_phiE255_NC_009237: gp42; KWY98_10780; phage(gi134288815)                1.58e-05            NeisseriagonorrhoeaeMATSKKAQRLLRVFLAMDAHPVIGISNKELSDGLGLTPSQVSRDIDDLVASGLVIKLENGNYAYGIKTLQIAERFRKQQERLNARLQELENRIY
2072171..2073052                   PHAGE_Burkho_phiE255_NC_009237: gp41; KWY98_10785; phage(gi134288829)                5.68e-07            NeisseriagonorrhoeaeMATEILGHTVGVTANELAIHSMEVMDKFSGGEAYNETVWIERGRFADAKRWKGCLSRDARSSSKSMRRMGGLPKSLKKSWPRTAGIPKTDECHPPFYRPENETSAAADDVGQIQTARAAGRRRRHFVGACRRRGQRQHFRCRPYDYGAARRPARKPNGGSERGDCRKKGRAGGKAVEKADGCQRATCGCGHRADDAAWQLDSLEVGIRSQISRLRDMFEQMAAHGEAHGFDHRAKMVGTLNQIILDCEQLRESYALPTEAPADNVPEWLGGETGEGDESGND
2073045..2074883                   PHAGE_Burkho_phiE255_NC_009237: gp40; KWY98_10790; phage(gi134288809)                4.33e-163           NeisseriagonorrhoeaeMIERLKAVENQAEAMGRGARSAYLKQQAQELGISLATLYRKLEAVSVKPTRKRRSDAGKTELKPEEAKLISAVLAEAMRRNGKRLMPVRQAVEMLRANGKIEAARIDGETGEVIPLSENTITRALREYKLHSDQLLQPDPVSRMKSEHPNHCWQIDPSLCVLYFLPRQGKDTGLRVMKEEEFYKNKPKNVVKIENDRVWRYTGTDHASGTISVRYYFGGETSANLCDFFIYMMQAKKDIGKDPFRTVPRMVMLDPGSANTSAAFKNLCKPLDVHVQINKPGNPRAKGQVEKANDIVETAFESGLRFTEVHDIDQLNALSERWMRYYNGTQKHSRHGMTRYQAWNKIKPEQLILPPPAEYCRELAVSAPKEAKVSADLEIRFGGRVYSVKGIKGILVGKKVLVGKKVLVGKKVLVGKKVLVGKKILVGKNPWEANGARVATYDAEGNEVWVSVPEVVFDEMGFKADAAVIGAEYKAPADTDAQRHRKELDKLAMGAETLEAAAAKRKGKAVPFGGKIDPYKHQEDTLAASNTLFMPKQGQQMDYNKMEVAEQVLSKVEIAKRLKPRVEADGGDWKQAVSVILKHYPEGVTEGRLEEAFERTRTRCRLKLLKTG
complement(2074924..2075112)       hypothetical protein; KWY98_10795                                                    N/A                 NeisseriagonorrhoeaeMPSEFFQTAFLPTRFACRVGLPVRPEASDKQGGFYSGLNLNRYGVASPCRTICTVCGFAALS
complement(2075222..2076608)       PHAGE_Clostr_phiCT19406A_NC_030950: capsid maturation protease; KWY98_10800; phage(gi100067)     2.39e-24            NeisseriagonorrhoeaeMIVVSRWPLLEKAFLRFGMPVAVVDLESTGGNLYEDRVTEVALVKFGQGRAERYEWLVNPQKPIPKFVAELTGISDGMVADAPVFAEIAGGLFSVLKGCVLVAHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRRLYPQFYKHSLDGIIERLGIVVEDRHRAMADVSALCDYLEYSLSAHGLEEWSRQCFRLTNPKLFPAALPERLRERLYGLPDGTGVLACFDGGGKVNYIGTFERAYGEVAALLDSGKAPVLVQYGGSPFFFPHWAACMHIRLKRNWSDVIIRVVMYLPKICLKHLRPSGLKKVQTACMRKQRLKTVRIIRLPDYLPIKRRRDGLCRRGRKHTDCVLPQPVSFRTVMQRMSLVPYMFQADAIRRAAVLTNKFWRLHTSCLFWIGEKCMRWKLPKPILRGKSRSAWNGRRIGNGRALVFRRFTGCVGEVNGQEKYGNRLA
2078665..2078679                   attR                                                                                 N/A                 CAAATGCCGTCTGAA

#### region 6 ####
complement(2157117..2159369)       PHAGE_Pseudo_F116_NC_006552: portal protein; KWY98_11210; phage(gi56692922)          0.0                 NeisseriagonorrhoeaeMGTDVPETGVLPDKNGEPLTIGEYRLFVGEMMNQPAWRAVADKEMDYADGRQLDNELLQKQRELGLPPAVENLITPTLLSVQGYEATIRTDWRVTADGETGGRDVADALNFKLNRAERQSRADKACSDAFRGQIACGIGWVEVTRNPNPFEFPYECGVIHRNAIHWDMKSYKYDLSDARWLIRRRWLLPERLAQFFPEYAGHFKAMGRGGSDWRISGEMLDGGGNTGLADAWGISGRNTVSEEFWFNETTRELAVAEVWYRRWVTADCLRDKKTGRTVEFDGANPNHREMAANGALLFAASVPRMRRAFVVGDLVVRDEPTPYPHQKFPYVPFFGFREDNTGIPYGYVRNMKYAQDNLNSTNSKLRWGLSAIRTVRTKGIVDMSDEQFRRNIARVDADIVLNKIEAAQPGARFDVSRDFELSAQHWQMLQDSRATIRQISGITPSFMGNRGNATSGRQESIQVEQSNQSLGLVMDNFRQSRSLVGELLLAMIIEDLGSDEQTVVIEGDAVTQGRTVVINRPETDPVTGKAYLSNDLQNIRLKVALEDVPSTNSYRSQQLGAMSEAVKSLPPEYQAAVLPFMVSLMDIPFKDKVIEKIKEVRVQETPEQIEARIAQAVQDALAKSGNDIKRRELALKEQRTASEIKEIEARAVQIGVQAAYAAMQAGGQIAAMPQIAPVADAVMQGAGYVRPARGDDPGFPVPAMPPETQIPPEGIPEAYGADTGPMTAVPPKSANHAQTGMETPTVSDNL
complement(2159369..2160643)       PHAGE_Pseudo_H66_NC_042342: DNA adenine methyltransferase; KWY98_11215; phage(gi100041)     0.0                 NeisseriagonorrhoeaeMTGKTVDLKLPAKLDGLFKPCRYKVMYGGRGGGKSHGAASALLALGAQRPLRILCAREIQKSMRDSVHRLLKDKVAQLGLGHFYEITDFEIRGANGTLFVFSGLQSHTVDSIKSFEGIDIVWVEEGHGVSKKSWDVLTPTIRKEGSEIWITLNPDMETDETYRRFIAMPSEDTWLCEINWRDNPWFPEALNRERLKAQRSMNKEDYGNIWEGRPRMVSEGAVYRHEIQDAFHSGRVTLVPYDSSLPVHTVWDLGWNDAMTIGLVQRDLTSVRIIGYIEDTHRTLDWYVAELEKLPYRWGTDFLPHDGRTRNFQTGKSTMEILTGLGRKSVFVQNAAGIEEGIRAARMLFPKVYFDKDKTARLLECLKRYGRQIHAKTGVAMGPLHDEYSHGADMFRYLAQAVDLMDTGSNTGYTETPVSDWRLY
complement(2160624..2160866)       hypothetical protein; KWY98_11220                                                    N/A                 NeisseriagonorrhoeaeMAENLSKSAEQIVAELYGSPEDTFTKARMFQTVAAGFKVLVEIERKSYGMDTAESKISESAKTAGIRIEFVGPEDDGKDG
complement(2160921..2161163)       PHAGE_Escher_HK639_NC_016158: terminase small subunit; KWY98_11225; phage(gi356870601)     1.23e-06            NeisseriagonorrhoeaeMPRLSDEDWRKVELDYRRGVLSIAEIGRKYNVSAQHVGRVAKERVWTRDLNDEVQAKARAMVLSADKNGNAPDYADFNLK
complement(2161163..2161585)       PHAGE_Pseudo_F116_NC_006552: hypothetical protein; KWY98_11230; phage(gi56692953)     6.92e-21            NeisseriagonorrhoeaeMSGLSDIDKVYQGVVDLHNAEQVVSREALAETTGLKMSEITKFTKLLVEHGKIYRVTRGIFKPAIGFGETRPVSVSVLDSGMGVLEIGDTVLHLNPQEMRSLGALMSGFGQQFSSIQMGREFSVLRNYLECSAKNGRLDF
complement(2161650..2162168)       PHAGE_Xantho_OP1_NC_007709: HNH endonuclease family protein; KWY98_11235; phage(gi84662624)     9.98e-34            NeisseriagonorrhoeaeMGLTQEVLKELLRYDDNTGKLYWAERPRKYFNSGLHYKSWNTGFSGKEVFLYKGRLGYLKLKIFKKQYNAHRLIWLFVYGKHASSIDHINRDKTDNRISNLRDVTHAENMKNRGKFKNNTSGHTGVYFHKPSKKWQARIMVNRKNKILGLFEHIEDAVKAREAASKDFGFVV
complement(2162159..2162542)       PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575: Putative ninB protein; KWY98_11240; phage(gi589286931)     4.48e-25            NeisseriagonorrhoeaeMNGAEFTLTPQNKKQVMRSIWDSPDGWFENGNLEITIRPRKSKRSIEQNRRLWFLYREISEKVFIDGRRFSQDVWHEFLKRKFIGCIEMPNGQLMGISTTKLSVREMSEYQEKIISWASMEHGVLWD
complement(2162539..2162889)       PHAGE_Vibrio_VvAW1_NC_020488: protein of unknown function (DUF1364); KWY98_11245; phage(gi460042926)     1.84e-20            NeisseriagonorrhoeaeMRQTRVGISSDRRVGMSSAIRKAAKGGQCTPNIAGVCNDNPETVVLCRFPGETHGAGLKSGGLGAGFGCGCRRGAIDGRGAGLSREDKEFYMRRSQLRTIRRLEALGVVGVKGRLK
complement(2162837..2163439)       PHAGE_Entero_cdtI_NC_009514: holliday junction resolvase; KWY98_11250; phage(gi148609431)     4.98e-08            NeisseriagonorrhoeaeMQNLPQQGSPAKARGKTRGGGSRRDDGGKAARIHPRRARRLPDIGRRPVDATGRGMRVIRLILPYPVSANRYWRIWRNRAVRSAEAAAYRETVRRIAQGAGAMPSEGAVAVYVRLIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIAADYADEPVAGGGLAVEVGELEMEQTDAADEGWDFIGQEGWDV
complement(2163575..2163724)       hypothetical protein; KWY98_11255                                                    N/A                 NeisseriagonorrhoeaeMDTLLSIITALSFAGAATLAVWLLVEAADAVLRRKRDGKGEDDFDGFGY
complement(2163940..2164434)       PHAGE_Burkho_BcepSauron_NC_049851: hypothetical protein; KWY98_11260; phage(gi100185)     1.56e-08            NeisseriagonorrhoeaeMTVRNTQTETVRTEAAPQQGGNTNPGYYKNRAFECVGFAQYLNFNLGNAFKYIWRHKEKGGREDLEKALRYLERQRAGAPKFKKLKCRRYEKMYAGLKDCGFDGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETAGGGI
complement(2164473..2164679)       hypothetical protein; KWY98_11265                                                    N/A                 NeisseriagonorrhoeaeMREGAECGRAGEALPANQSLRRRGVSDGIGGGSRKKDGGAWGISPRNAPNLSGKAGKTLWEYPSLPEI
complement(2164749..2165528)       PHAGE_Vibrio_X29_NC_024369: IstB-like ATP binding protein; KWY98_11270; phage(gi658311189)     8.71e-44            NeisseriagonorrhoeaeMALRNASDFLGAYGGGVRVERRQCAEHGGYAAKSVLRGVWTGCPACRKLEAADEMAAYAETLRRGAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMARAKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGDMLRTVKDSFGGGGEAGAVGIFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLMPMLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWESYRA
complement(2165542..2166441)       PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575: Putative replication protein O; KWY98_11275; phage(gi589286926)     1.82e-08            NeisseriagonorrhoeaeMKYIPNSFQIANAVVDDFLCRMSGNAWKCYAVIVRKTTGWQKEIDYISVSQFKNLTGIKTDVTVADALKELVELNLIASVKRHGQVTGYRINMPEPSPENGGTPPPENGGTATPKNWVHPKNGTTPKNWGVLPPENGGTTTPKNWGSTKHTTKPTNTKHSISASAAADAPLSAEPPESGKRAPAAKAKKTGRHETELSLLADYGITGQVAADFLQVRKAKRQPLTETAMRLIAADAEKCGMTALQAAEYAIASGWGSFRADWLQNKTFGRSGNRGGPTHNQTAAVLDAGSYGDMPTTDF
complement(2166544..2166774)       PHAGE_Entero_c_1_NC_019706: prophage antirepressor; KWY98_11280; phage(gi428781783)     9.01e-07            NeisseriagonorrhoeaeMDLRDYCAIRGNQSDLARKTGISPSFIHQIAKGLKPVPIQSAALIEKSTNGRVTRKEMFPDTWHLIWPELADDQPK
2166888..2167586                   PHAGE_Pseudo_vB_PaeP_Tr60_Ab31_NC_023575: Putative Cro/CI transcriptional regulator; KWY98_11285; phage(gi589286922)     1.46e-46            NeisseriagonorrhoeaeMNRVDRIKNLIADRFNGNQAEFSRAINKAPAQINQWLNGYRNIGDGVAAQIEIALGLPRGWVDGNDKPGIPVDSIKSNATVIGSVDAWDSKTPLSDDDCEVPFYKDVCLSAGNGFSDEIEDYNGYKLRFSKSTLRRHGINPDDVVCVSADGDSMEPVFPDGATLGINTADKMIKDGKIYAINHSGLLRTKILQKLPDNQVRIKSYNPEYKDETASLDSLTVIGRVFWWSVLD
2167586..2168146                   hypothetical protein; KWY98_11290                                                    N/A                 NeisseriagonorrhoeaeMDIKTEEAYRLSFQHIQSHDVLAACRTVANYELSQPRPRGLFSGISAQEYWESYPCNEDAEILKSILLDSPEILDGISGGDMEMARIMAAFNFIWGLSHFPKWLHRHEFASTPLDDSAVPAMLLFHAQSRQELKEYEEVELSCCPDGCEFCKSEDGKIYKSSDAPVLPHAHCTHEQGCRCCYLPVI
2168468..2168668                   hypothetical protein; KWY98_11295                                                    N/A                 NeisseriagonorrhoeaeMNELISRINRFGTRAKDEQSLLLKVGEICRDAAATWTTRKSESINHTAFTFTVKKDGLKEKVMIVL
2168701..2169177                   PHAGE_Iodoba_phiPLPE_NC_011142: hypothetical protein; KWY98_11300; phage(gi197085698)     1.68e-32            NeisseriagonorrhoeaeMEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQHEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWWAKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVAQS
2169174..2169449                   hypothetical protein; KWY98_11305                                                    N/A                 NeisseriagonorrhoeaeMSYLDQPLKHGYGNGNGSGNGSGYGNGYGNGYGNGYGGVGGGGSGSGYGNGNGYSNGSGNGDGDGNGNGSGNGSGYGNGYGNGYSNGSGNG
2169591..2169923                   hypothetical protein; KWY98_11310                                                    N/A                 NeisseriagonorrhoeaeMKYYGTAAYGSPDWGMERYYAREDMRQALDGWEAENRILHESGLIEIAKKSAREFVRDADGEPYAQEDWETYLTEDASRIGKDTEAAMNYAIDEREWFALAENIGRLANS
2170039..2170314                   hypothetical protein; KWY98_11315                                                    N/A                 NeisseriagonorrhoeaeMKTRNIAFKFAVLAAVLAAGYAFGFAKGGGSRTAKGKPADIAAMRMALAQKQAEVDELSAEIWLEERHLNAGEEAGCRRVHGDAEVPEGKE
2170311..2170472                   hypothetical protein; KWY98_11320                                                    N/A                 NeisseriagonorrhoeaeMSFHPETAYTGGRETEPYGPSPEEIKYRQSPETAETRRMTEKQAEGHIKSIIR
2170541..2171227                   PHAGE_Pseudo_RIO_1_NC_021300: putative ssDNA binding protein; KWY98_11325; phage(gi508178031)     1.70e-10            NeisseriagonorrhoeaeMSLILSVKDESNFKPCPAGSHHATCIRIIDLGTQLVEYQNEQKRQHKILVQWEIDPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDFTPEERDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKQPDNAVFAFDLSDPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGRPEHPQGNAAPAEDIEDDIPFN
2171367..2171549                   hypothetical protein; KWY98_11330                                                    N/A                 NeisseriagonorrhoeaeMANIDLTQWDGKTIGAAANPEQGYINIIIGSDDLFINIEQAYAIHAALGEAVAEYEGGAQ
2171546..2172037                   PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; KWY98_11335; phage(gi374531698)     1.66e-18            NeisseriagonorrhoeaeMTALTLYRCAADVQAALDYYFDSETEREDTLEAVIGQFEVKAQSVIAYIKNQEITEKMLEGHIRQMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGTFKASFRKSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNLQIR
