gi|00000000|ref|CP084647.1|  Yersinia ruckeri strain 17Y0157 chromosome, complete genome. 3719931, gc%: 47.64%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1961456..1961467                   attL                                                                                 N/A                 GCCGCTGTTGAA
complement(1962958..1964961)       PHAGE_Synech_S_SKS1_NC_020851: nucleotide-sugar epimerase; LGL89_08850; phage(gi472340882)     1.33e-12            YersiniaruckeriMKAIVFAYHDIGCVGIKALVEAGYDIQAIFTHTDDPAENHFFSSVARVAAELELPVFAPEDVNHPLWVEQIRELQPDVIFSFYYRNLLDEQILSIAPQGAFNLHGSLLPRYRGRAPINWVLVNGETETGVTLHQMVKRPDAGGIVGQCRVAISDSDTALSLHGKMRDAAQTLLRDLLPKMKNEALPLIPQVEADASYFGRRTAADGEISWLKSAAELHNLVRAVTEPYPGAFTHLGQRKLIVWRARPLDCNHNKIPGTVLSAHPLVIACGDGALEIISGQSDAGLYMQGHRLAAEMGMVADVRLGVKPLNKHKRRTRVLILGVNGFIGNHLTERLLRDDGYEVYGLDIGSDALGRFIDNPRFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLKVFELDFEENLKIVRDCVKYNKRIIFPSTSEVYGMCDDKEFDEDHSRLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLKFTLFRPFNWMGPRLDNLDSARIGSSRAITQLILNLVEGSPIKLVDGGEQKRCFTDINDGIEALFRVIENRDGRCDGQIINIGNPTNEASIRELAEMLLSSFEQHELRDQFPPFAGMKSIESRAYYGKGYQDVEHRTPSIENARRLLDWQPKIAMQQTVTETLDFFLRSELAAQQATLVNGKTK
complement(1964961..1965941)       PHAGE_Entero_ST104_NC_005841: GtrB; LGL89_08855; phage(gi46358650)                   3.32e-51            YersiniaruckeriMSQPEMIKKVSIVIPVYNEQESLPTLLERTKAACQKLSQPYEIIMVDDGSSDNSAAMLTAAAEQPGSAVIAVLLNRNYGQHSAIMAGFNQVSGDLVITLDADLQNPPEEIPHLVSVAEEGYDVVGTVRANRQDSLFRKTASKLINMMIQKATGKSMGDYGCMLRAYRRHIVDAMLHCHERSTFIPILANTFARRTTEITVHHAEREFGDSKYSLMNLINLMYDLITCLTTTPLRLLSLVGSVIALSGFTLSVLLVALRLIFGPEWAGGGVFTLFALLFMFIGAQFVGMGLLGEYIGRIYNDVRARPRYFVQKVVGSKPADTTQEKE
complement(1965928..1967082)       PHAGE_Synech_S_CAM7_NC_031927: hypothetical protein; LGL89_08860; phage(gi100227)     3.56e-19            YersiniaruckeriMDRFLPFSVPAIGDEEIAAVTDVLRSGWITTGPQNQRLEHDFCQAFGCKHAIAVCSATAGMHITLMALGIGPGDQVITPSQTWVSTLNMIVLLGAEPVMVDVDSDTLMVSAETIEAAITPKTRAIIPVHYAGAPCDLAPIRRLARHHNIPLIEDAAHAAGTRYGNEWIGQQGTAIFSFHAIKNMTCAEGGLIATDDDLLAERVRRLKFHGLGVDAFDRELKGRSPQAEVVEPGYKYNLSDIHAAIAVVQLKRLPEMNARRQALAQRYIQALSDSPLQPLAVPNYAHHHAWHLFMVRVDAENCGIDRDQLMAELKAVGIGSGLHFRAAHTQKYYRERYPDLELPNTEWNSARLCTLPLFPDMQDSDVDRVVKALATIIEARRVTA
complement(1967464..1968225)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; LGL89_08865; phage(gi371496158)      1.20e-10            YersiniaruckeriMLLQLSDISVAGRLAPLSAQVEAGLQIHLIGPNGAGKSTLLACAAGILPAAGALSLAGRPLLSYSGAELARYRAYLCQQQPAVSLMPVFQYLSLHQPVGASPENLASTIGYLCQKLRLADKLSRMLSHLSGGEWQRVRLAAILLQVWPTVNKHSRLLLLDEPANSLDVAQKVALDELLTEFCASGRSVIMSAHDLNHTLQQADRVWLLAQGKMVAQGETAQVMRPEVLSPVFEVDVQIQSFNQQHWIMTKSVC
complement(1968388..1969395)       vitamin B12 ABC transporter permease BtuC; LGL89_08870                               N/A                 YersiniaruckeriMQINQTFQLLQQRQLQRDRRYLRLLVLGSLLALTVSLCAGEVWLWPSQWYSADGQLFVWQLRLPRALAVMMVGASLAVAGAIMQALFENPLAEPGLLGVANGAGVTLVLAVLLGHGLLPVWVLSVSAIVGALLMTALLLGFARRQRLTNAKLLLVGVALGIVCSAIMTWAVYFSTSLDLRQLMYWMMGGFSGIDWRQQGMVLLLLPIVIWLCFRGRILNFMALGEQQARQLGVSLHLWRNLLVLAIGLLVGISVALAGVIGFIGLIIPHILRLTGLTDHRYLLTGCALAGAATLLLADVIARIALFSAELPIGVVTATLGAPLFIWLLVRVKSVR
1969356..1969367                   attR                                                                                 N/A                 GCCGCTGTTGAA
complement(1969741..1970232)       PHAGE_Entero_P88_NC_026014: integrase; LGL89_08875; phage(gi744692701)               4.68e-41            YersiniaruckeriMANTVIFGCARYQPAQGVLAAADSQLAGMSPRGSAGSSRWVNANRSFTSETLTASVSSRNRTVPISAELFKELKAKGNGKVYPDVDYLLVRQLLKEIAPDLPKGQAIHALRHTFASHFMMNGGNILTLQKILGHSNILQTMTYAHLAPDYLQDAVRFNPLADR
1970250..1970867                   PHAGE_Entero_P88_NC_026014: tail protein; LGL89_08880; phage(gi744692734)            1.34e-50            YersiniaruckeriMDNEFQELEQYLQRLMNRGKSGARHKLSRDIAITLRRGQQQRIRQQLNADGTPYTKRKDNVKTVQKRLRFIYQGTVRDLKNWSGNKCQITGWDNDRNAIRTFNRVDIDRFLSVETQATTKRTSKKQPMFRRLRNATFLRLQAMPDSAGVGYTGVAAKIAQVHQYGGTDQVNPYVKADYPARQLLGITSKDSDNVLSQVFDFIARG
1970949..1971149                   YhfG family protein; LGL89_08885                                                     N/A                 YersiniaruckeriMANVMTSLAEKKQYFDRVKLDNYRESMRLEGLNSSNHVLPASKHERDRLKQSLMNKYAAKTQQGSL
1971146..1971628                   PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; LGL89_08890; phage(gi526003651)     2.53e-09            YersiniaruckeriVISDKYGDGPDPYTYPNSQVLINKFDITDDSQFVEMEQDFSELAIMDIEFSPPPYDLLYWRSLHQALFGDIYHWAGELRTIDIAKGTTRFCHINRIKPESDRMFSQLAQENYLVGLPYDSLIVKLAEYYSDLNVIHPFREGNGRAQRLLFEHIVINCGFKI
1971646..1971942                   PHAGE_Bacill_PM1_NC_020883: hypothetical protein; LGL89_08895; phage(gi472438254)     5.22e-24            YersiniaruckeriMSNMVFCRGCGKEIHESARACPSCGATQKVTGERNRMVAALLAFFLGGFGAHKFYLGKIGQGFLYLIFCWTFIPAIIAFIEFIIYLCNSDEEFARKYG
complement(1972156..1972452)       PHAGE_Bacill_0305phi8_36_NC_009760: DNA-binding HU protein; LGL89_08900; phage(gi156564019)     3.09e-19            YersiniaruckeriMALTKAEMSEHLFEKLGLSKRDAKDLVELFFEEVRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENATPKE

#### region 2 ####
2626913..2626925                   attL                                                                                 N/A                 ATCGGCATTATGG
2640361..2641674                   PHAGE_Lactoc_P596_NC_049808: hypothetical protein; LGL89_11975; phage(gi100002)      1.44e-05            YersiniaruckeriMTVTNFSELDLDDRLIDALRDKGYERPTAIQAAAIPPAMDGRDVLGSAPTGTGKTAAFLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKHTQLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAAETRWRKQTLLFSATLEGEAIREFAERILEEPVELEADPSRRERKKIQQWYYRADDIEHKTALLVHLLKQPDVQKSIIFVRTREKVHQLVSWLREAGINAWFLEGEMVQAKRTEAVIRLSDGRVNVLVATDIASRGLDIDDISHVFNFDLPLTADVYLHRIGRTGRAGRKGVAISLVEAHDHLLLGRIGRYLKEPLKPRVIDELRPTSKEPSAKSTGKPSKKVLAKRKELKEASKEKTKVKVRHRDAKNVGKRRKPKDKATN
complement(2641950..2642612)       ankyrin repeat domain-containing protein; LGL89_11980                                N/A                 YersiniaruckeriMIESKSVFIDPQVMPMAEAIIRGDVAQIHQLATEKLLEQRGDQSITLLQWAILNQQPKSLLALLDKNADPLQPGLQGNSALHTAASVKDPRYLQILLDRHLKPDVRNSITSATPLAAAVMAGRQDQVMMLLAAGADPNLPDRLGDTPLHLAGKINAPELALLLLRAGANPALRNKQKATFQQYFAMTPVHLQTSEMQSKYQQLNEWLRSHQWVELYQKQP
complement(2642701..2643678)       prolyl oligopeptidase family serine peptidase; LGL89_11985                           N/A                 YersiniaruckeriMSMPLSFSIASSANVISNPMIPSPSIKVASTLSETLPVTSSPAPQMILTAATQGANDLYQSMMGDLSLSRGELAAVKSAEMIGKGKASQQSDYSLALMAKDVYAPSGANLDGFQRVSDEALLKVGIDPASLSDRASGFQAGIYSNQQQYVLAFAGTNDMQDWLSNIRQATGYDDIQYNQAVALGKTAKMAFGDSLVITGHSLGGGLAATAALATATFAVTFNAAGVSDHTMNRLGINPVAAKKEAESGAIRRYSEQYDMLTDTQESTPLIPDAIGHKITLANDEKLTGLNDWRPSKHLERRLTAHGIDKVLSSMSEQKPWELKNA
complement(2643892..2644275)       PHAGE_Entero_RB16_NC_014467: Vs.6 conserved hypothetical protein; LGL89_11990; phage(gi304373634)     5.21e-42            YersiniaruckeriMITGIQITKANNEALLNSFWLLDDEKAEMRCVCAKAGYAEDQVVPASELGQIEYREVPLEVESTVRVEGGQHLNVNVLRRETLEDAVKNPEKYPQLTIRVSGYAVRFNALTPEQQRDVITRTFTESL
2644627..2645310                   PHAGE_Flavob_Fpv1_NC_031914: hypothetical protein; LGL89_11995; phage(gi100059)      5.76e-37            YersiniaruckeriMTTSLTWHDVIGQEKEQPYFQQTLARVAAERNAGKTVYPPQKDVFNAFRLTELDQVKVVILGQDPYHGPNQAHGLSFSVLPGVPAPPSLVNMYKELMSDIPGFERPNHGFLQSWATQGVLLLNTVLTVEGGKAHSHANFGWEAFTDRVISALNTHREDIVFLLWGAHAQKKGQIIDPQRHHILKAPHPSPLSAHRGFLGCKHFSLTNQLLEKQGLTPIDWQPRLPAA
complement(2645364..2645942)       PHAGE_Escher_500465_1_NC_049342: tail assembly protein; LGL89_12000; phage(gi100053)     5.63e-39            YersiniaruckeriMSSKEQKAPNEQVSEEMEQAVEQQAGAAQEMSDGVDPRIAELETQLADALQRERDSLLRAKAEVENIRRRTELDIEKAHKFALEKFSSSLLPVIDNLERALDSADHSNTELAVMIEGVELTRKSLLDAVEKFGIEVVAESNVPFNPEVHQAMTMIESADHEPNHVMNVMQKGYTLNGRLLRPAMVVVSKAKA
2646067..2646945                   PHAGE_Escher_500465_1_NC_049342: hypothetical protein; LGL89_12005; phage(gi100051)     1.93e-165           YersiniaruckeriMNKRFNCIGIVGHPRHPAALATHEMLYHWLKSKGYAVMVERQIARDLNLSDAVTGSLADIGQKADLAVVVGGDGNMLGAARVLARYNIKVIGVNRGNLGFLTDLDPDNAQQQLSDVLEGEYLSEQRFLLETQVRRANQQCRMSTAINEVVLHPGKVAHMIEFEVYIDDRFAFSQRSDGLIIATPTGSTAYSLSAGGPILTPTLDAIVLVPMFPHTLSARPLVINSSSTIRLKFSQISSDLEVSCDSQIALPIQDGEEVLIRRSDFHLNLIHPKDYSYFNTLSTKLGWSKKLF
2647032..2648693                   PHAGE_Escher_500465_1_NC_049342: putative single-stranded DNA binding protein; LGL89_12010; phage(gi100050)     0.0                 YersiniaruckeriMLAQLTISNFAIVRELEIDFQPGLTTITGETGAGKSIAIDALGLCLGSRADGSMVRLGATRADICARFSLADTPTARAWLEQHQLDDSNECLLRRAIGSDGRSRGFINGTAVPLSQLRELGQHLIQIHGQHAHQLLLKPDHQKQLLDAYADQPALLAEMKAAYQAWHKSCRALALHQQQSLERDARHQLLQYHLKELNAFAPIQGEYEQIDAEYKRLANSGQLISISQQALQLLADDEQQNILSQLYSVKELITELAGMDEQFHNLLNMLEEASIQISETSDELRHYGEKLDMDPNRLYELEQRLSRQLNLARKHHIAPEELPALHQQLLEEQQALSQQESDHEQLSETVNIHYQHALVLANQLHQKRQYYAEELSTLITESMHQLSMPHGQLAIDVHFAPEHLSAEGASRIEFGVTTNPGQPLQPLAKVASGGELSRIALAIQVITARKMDTPALIFDEVDVGISGPTAAIVGRLLRQLGESTQVMCVTHLPQVAGCGHQHLFVSKQTDGGETETQMHKLDKKARLQELARLLGGSEVTKNTLANAKELLAA
2648808..2649149                   PHAGE_Escher_500465_1_NC_049342: recombination protein; LGL89_12015; phage(gi100049)     1.27e-65            YersiniaruckeriMRCKMLTAAAVMLVMLTAGCSTLEKVVYRPDINQGNYLSPNDVSKIHKGMTQQQVAYTLGTPMLEDPFGTQTWFYVFRQQPGHEKVTQQTLTLTFDSSGVLTDIKNVPSLTGN
complement(2649291..2649575)       PHAGE_Escher_500465_1_NC_049342: exonuclease; LGL89_12020; phage(gi100048)           6.02e-45            YersiniaruckeriMSEFCVEVVYALPERQYVRKVYLAEGCTVEQAIEASGILELRTDIDLKKNKVGIYSRPVKLGDRVHDGDRVEIYRPLIADPKELRRIRAEKTKK
complement(2649556..2650002)       PHAGE_Escher_500465_1_NC_049342: primase; LGL89_12025; phage(gi100047)               1.45e-85            YersiniaruckeriMPQISRSALVPFSAEQMYQLVNDVKSYPEFLPGCTGSRVIETCDNEMTAAVDVAKAGISKTFTTRNILTDNQSINMQLVDGPFRKLMGGWHFTPLSADACKVELHLDFEFTNKLIELAFGKVFKELAGNMVQAFTQRAKEVYSVGVLR
2650163..2650645                   PHAGE_Escher_500465_1_NC_049342: HNH endonuclease; LGL89_12030; phage(gi100046)      4.97e-98            YersiniaruckeriMTKKKAYKPGSATIAQNKRARHEYFIEQEFEAGLSLQGWEVKSLRAGKANISDSYVTFRNGEAFLFGATITPLNVASTHVVCEPMRTRKLLLNKRELDSLIGKVNRDGFTVVALSVYWKNAWVKVKIGVAKGKRDHDKRDDIKDREWQVDKARIMKHANR
2650694..2651074                   tRNA                                                                                 N/A                 GGGGCTGATTCTGGATTCGACGGGATTCGCGAAACCCAAGGTGCATGCCGAGGTGCGGAGGCCTCGTAAAAAACCGCAAAAAAAATAATTGCAAACGACTCGCAATACGAATCTGCTGCTTTAGCAGCTTAATCAGCCTAAGAAACTGAAGATTCCCTCTCTCCCTAGCCTCCGCTCTTAGGACGGGGATAAAGAGAGGTCAAACCCAAAAGAGATCGCGTGGACACCTTGCCTGGGGTGAAAGCGTTAAACCCAATCAGGATAGTTTGTTAGTAGCGTGTCCGTCCGCAGCTAACCGGCGAATGTAATGACTGGACTAAGCATGTAGTGCCGACGGCGTAGTAATTTCGGACGGGGGTTCAAATCCCCCCAGCTCCACCA
2651278..2651859                   PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; LGL89_12040; phage(gi16130540)     4.16e-113           YersiniaruckeriMARQTKPLSVKEIESAKPKEADYVLYDGDGLELLIKSSGSKIWQFRYIRPVTKKRAKKSIGAYPSVTLADARSYRADARVLLAKQIDPQEHQQEQLRSSIEAKTNTFQLVAERWWNVKKASVTEDYAEDIWRSLERDVLPAIGDISITDIKAHTLVQAVQPVQARGALETVRRLCQRINEVMVYAQNTGLIDAV
complement(2651878..2653027)       PROPHAGE_Xantho_33913: ISxac3 transposase; LGL89_12045; phage(gi21231087)            3.65e-27            YersiniaruckeriMSVKTFTEEFKIEAVKQINEQGYPVSEVAARLGVSTNSLYAWIKRYQKPEPQRKQDDALQHEVKRLRQELKRVTEERDILKKAAAYFARTSGSTPSLKKCRPFMRYAGCVWFLASITAVITSGNGLNLCAPGKMSAKQASLNNCGLKVVRFMVIEKSGSTKTWVSELGVTGSRAGLQSWLLKPDIGNAAITAAEKHQLPTLITLNASSLFLPQYALGEHDLYQNAGMVVSGRCSRSFLASGYRLEYGGANDSRAGDGRLVDGSVATTNGKSTNPFGSGLAIYERKMSAFYDRSQFKKQHESPRLPCGGKLFSVAKTRTHKETDLKRRSEGGYLRLCRDVLCTASQCLRSTTCSLKCLVHEARNRLG
2661755..2661767                   attR                                                                                 N/A                 ATCGGCATTATGG

#### region 3 ####
complement(2956269..2957356)       PROPHAGE_Xantho_306: ISxac2 transposase; LGL89_13515; phage(gi21244662)              3.33e-135           YersiniaruckeriMKKSRFTDSQIMSILKQAEAGTPVTELCREHGMSNASFYKWRSRFGGMDASMMTRLKELEDENRRLKKMYAEERLKAEIIQEAMGKKVVTPSRRKQMAQDAVRNRNVSVRFACQLFVVSESCYRYQPHLNKENDLIADWLLRITDSQRNWGFGLCFLYLRNVKGFRFNHKRVYRIYCELSLNMRIKPKKRLKRDKPEPLVVPENRNECWSMDFMHDQLSDGRSVRLLNVIDDFNREALAIEVDFSLPASRVIRTLEQLIEWKGKPTVIRCDNGPEYTGKMLMSWAVHQNITLRFIQPGKPQQNAYIERYNRTVRYDWLGQYLFTSLDELQNYATQWQWFYNNERPNMALNGYTPMQHIQRMA
2957549..2957683                   PROPHAGE_Escher_MG1655: IS3 transposase A; LGL89_13520; phage(gi226524700)           1.71e-20            YersiniaruckeriMTKSVSTNKKPRKQHAPEFREEALKLVERIGVAAAARELSLYEQQ
2958348..2959328                   PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: holin; LGL89_13525; phage(gi100034)       8.07e-49            YersiniaruckeriMSETKHISEMAEKVADNLFAVFKWERKVVSDHSWDCDSPEEHGGKKDHPSDCVFYYRDPYDGEVKYINTDLKSYAKTTITKEQINKAIHSLSYATNCAAYNDNWRKLFKPIGSFSVIGMLFVYNHCGGYNGNFSEIVAEIGSDDNHLDSDKMICIFSPYQITTLNSIASDIRVMIGKDELPKLNKFSYYHPNEMLIKNHFSHDYTEPATINVLSSPWIIIKHAECDKEKAGYLIYYTKDGSEEEEFDYLIDALSYYQIIDNTINVRIKLTKKNDHAVNNLITAICKYYKFLGRSEEESRALANNMVKGTIDQVVPQFSPIELGVLS
2959325..2960428                   PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: hypothetical protein; LGL89_13530; phage(gi100035)     3.22e-29            YersiniaruckeriMSDVEKKYGHSIYYMNDQNIRDGLLAQKIKPLHLIKILKERNIIVSPLASKEELINILKYLRFDYYEYVYLSSLLANQDKKESKSSIDIDKKVTTTQIVQTFDAIKGALEDHQITANVQKFGRGKVVINYEYVEFDHSKPPMRQKSFRKGIVECDINDKGAMLNYPANKVGSIIKEHLISQLSAKLQTELKPIEFDFEFSRIPTRNKFFLEVINNVENYDVYDVVTVAVKKVDEKKEQESSLTDDSESVDEAFTGEVRNAILRGRQILTSKIYGSLNVDNYYIYKITWKIRKVIPKVGSDKSDCYTVEIEFSDKDKAKGLKYCVKTVQKYSSRDKLNVTTENPLKSDQENIGKLIYQTALKVYSSLP
2960441..2961109                   PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: hypothetical protein; LGL89_13535; phage(gi100036)     1.69e-06            YersiniaruckeriMEKRIVFYDFESKLNHEQIVNRFLEHRFTHDANSGFSLNKRNDNGIYFRHIKKNINIDKVMTPFGDEYENTTIDYAINEVKIKDNTLYITNPTRSLIPFRTDLLKALGFQCVISNKIINLKNVISLLCKQEHDVNLTDIELTTNELFKDSRVKMVVSSNSDLISKMKNYLGDIDSNLTKIGFNMKILNEEYFVEIGCKGSVKIKGRLVEDFAENYIIRNFLS
complement(2961419..2962102)       PHAGE_Escher_RCS47_NC_042128: flap endonuclease; LGL89_13540; phage(gi100131)        3.99e-32            YersiniaruckeriMAKVDVVCPQCHETQGVRCNGYSASGAQRYICKLCSKTFQLNFSYSGAKPDTHQIIVNMAMNGSGCRDTARVLGISLNTVLRHLKNFAKTGSEYRRRSGSHYLLSRTVVLRAVSQSPVAVLRLPYPQTGSGPRLRPEKCLDSATIVGSVKQIYCLLYDRCLAGLGPVERNQPRGEQEIHPKDRTASSSYTYQTVDPQNICFSKSEEMHDKIIGCYLTIH
