Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region,
   the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:
1. If the number of certain phage organism in this table  is more than 50% of the total number of CDS of the region, that phage 
   organism is considered as the major potential phage for that region; the percentage of the total number
   of that phage organism in this table in the  total number of proteins of the region is calculated and 
   then multipled by 100; the percentage of the length of that phage organism in this table in the length 
   of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:
1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber',
   'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased 
   by 10 for each keyword found.
2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
3. If there are at least 40 proteins in the region, the score will be increased by 10.
4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of
   the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
   


Totally 8 intact prophage regions have been identified.




                                  REGION         REGION_LENGTH            COMPLETENESS(score)           SPECIFIC_KEYWORD                             REGION_POSITION          TRNA_NUM                 TOTAL_PROTEIN_NUM       PHAGE_HIT_PROTEIN_NUM            HYPOTHETICAL_PROTEIN_NUM         PHAGE+HYPO_PROTEIN_PERCENTAGE    BACTERIAL_PROTEIN_NUM            ATT_SITE_SHOWUP                  PHAGE_SPECIES_NUM                MOST_COMMON_PHAGE_NAME(hit_genes_count)    FIRST_MOST_COMMON_PHAGE_NUM      FIRST_MOST_COMMON_PHAGE_PERCENTAGE   GC_PERCENTAGE                 
                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                                  1              9.7Kb                    questionable(80)              transposase,tail,protease                    839741-849515            0                        7                       7                                0                                100%                             0                                no                               4                                PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Bacill_BalMu_1_NC_030945(1),PHAGE_Pseudo_phi3_NC_030940(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Stx2_c_Stx2a_F451_NC_049924(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Escher_SH2026Stx1_NC_049919(1),PHAGE_Vibrio_VP58.5_NC_027981(1),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(1)   3                                42.85%                           51.72%                        
                                  2              11.4Kb                   incomplete(30)                transposase                                  1078584-1090020          0                        11                      10                               1                                100%                             0                                no                               5                                PHAGE_Escher_RCS47_NC_042128(5),PHAGE_Haemop_SuMu_NC_019455(2),PHAGE_Entero_P1_NC_005856(2),PHAGE_Mannhe_vB_MhM_3927AP2_NC_028766(2),PHAGE_Staphy_SA1_NC_027991(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Cyanop_P_RSM1_NC_021071(1),PHAGE_Synech_S_ShM2_NC_015281(1),PHAGE_Pseudo_JBD93_NC_030918(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Synech_S_P4_NC_048102(1),PHAGE_Ralsto_RS138_NC_029107(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Bacter_B124_14_NC_016770(1),PHAGE_Shigel_SfIV_NC_022749(1)   5                                45.45%                           51.09%                        
                                  3              14.3Kb                   questionable(80)              transposase,integrase,tail                   1157111-1171443          1                        13                      13                               0                                100%                             0                                yes                              3                                PHAGE_Escher_500465_1_NC_049342(12),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Entero_P1_NC_005856(1),PHAGE_Staphy_StauST398_5_NC_023500(1),PHAGE_Klebsi_ST15_OXA48phi14.1_NC_049454(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Entero_P4_NC_001609(1),PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448(1)   10                               92.3%                            50.70%                        
                                  4              10.6Kb                   questionable(90)              transposase,plate,tail                       1220898-1231576          0                        12                      12                               0                                100%                             0                                no                               8                                PHAGE_Entero_phiP27_NC_003356(4),PHAGE_Aeromo_vB_AsaM_56_NC_019527(3),PHAGE_Salmon_Fels_2_NC_010463(2),PHAGE_Entero_SfMu_NC_027382(2),PHAGE_Edward_GF_2_NC_026611(2),PHAGE_Xantho_OP2_NC_007710(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Escher_520873_NC_049344(1),PHAGE_Acinet_phiAC_1_NC_028995(1),PHAGE_Escher_pro483_NC_028943(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Burkho_Bcep43_NC_005342(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Acinet_WCHABP12_NC_041924(1),PHAGE_Acinet_WCHABP1_NC_041966(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Salmon_SEN8_NC_047753(1),PHAGE_Burkho_Bcep781_NC_004333(1),PHAGE_Acinet_AB1_NC_042028(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Escher_500465_1_NC_049342(1),PHAGE_Acinet_LZ35_NC_031117(1),PHAGE_Escher_503458_NC_049341(1),PHAGE_Entero_P2_NC_001895(1),PHAGE_Escher_pro147_NC_028896(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Acinet_AbP2_NC_041998(1),PHAGE_Entero_DE3_NC_042057(1)   4                                33.33%                           49.67%                        
                                  5              7.4Kb                    incomplete(20)                transposase                                  1292866-1300334          0                        8                       6                                0                                75%                              2                                no                               3                                PHAGE_Escher_TL_2011b_NC_019445(4),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Salmon_SJ46_NC_031129(2),PHAGE_Staphy_42E_NC_007052(1),PHAGE_Thermu_phiYS40_NC_008584(1),PHAGE_Caulob_Cr30_NC_025422(1),PHAGE_Thermu_TMA_NC_015937(1),PHAGE_Bacill_G_NC_023719(1)   4                                50%                              48.83%                        
                                  6              44.5Kb                   intact(110)                   transposase,integrase,tail                   1661973-1706477          0                        24                      15                               0                                62.5%                            9                                yes                              11                               PHAGE_Entero_phiP27_NC_003356(4),PHAGE_Entero_YYZ_2008_NC_011356(4),PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Entero_P1_NC_005856(2),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Entero_HK629_NC_019711(2),PHAGE_Entero_lambda_NC_001416(2),PHAGE_Entero_SfMu_NC_027382(2),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Entero_P2_NC_001895(1),PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Entero_DE3_NC_042057(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Bacill_SPbeta_NC_001884(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Entero_Mu_NC_000929(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_cdtI_NC_009514(1)   4                                16.66%                           51.57%                        
                                  7              15.2Kb                   intact(150)                   integrase,transposase                        1812315-1827587          0                        21                      17                               1                                85.7%                            3                                yes                              4                                PHAGE_Stx2_c_1717_NC_011357(5),PHAGE_Escher_SH2026Stx1_NC_049919(3),PHAGE_Stx2_c_Stx2a_F451_NC_049924(3),PHAGE_Entero_BP_4795_NC_004813(2),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Entero_Sf101_NC_027398(1),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Entero_mEp234_NC_019715(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_HK140_NC_019710(1)   13                               23.8%                            51.14%                        
                                  8              29.4Kb                   intact(100)                   integrase,head,tail,transposase              1827587-1857074          6                        20                      17                               0                                85%                              3                                yes                              11                               PHAGE_Stx2_c_Stx2a_F451_NC_049924(3),PHAGE_Escher_SH2026Stx1_NC_049919(3),PHAGE_Salmon_118970_sal3_NC_031940(3),PHAGE_Shigel_SfII_NC_021857(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Yersin_PY54_NC_005069(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(2),PHAGE_Entero_mEp460_NC_019716(2),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Phage_Gifsy_1_NC_010392(2),PHAGE_Shigel_POCJ13_NC_025434(2),PHAGE_Escher_Av_05_NC_025830(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Erwini_vB_EhrS_59_NC_048198(1),PHAGE_Entero_cdtI_NC_009514(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_c_1_NC_019706(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Escher_ArgO145_NC_049918(1),PHAGE_Shigel_Stx_NC_029120(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Entero_N15_NC_001901(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Entero_HK140_NC_019710(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Escher_phiV10_NC_007804(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Entero_SfI_NC_027339(1)   3                                15%                              47.97%                        
                                  9              34.5Kb                   intact(150)                   transposase,protease,tail,capsid,head        1952010-1986563          5                        38                      34                               1                                92.1%                            3                                no                               14                               PHAGE_Entero_cdtI_NC_009514(13),PHAGE_Salmon_Fels_1_NC_010391(10),PHAGE_Entero_mEp460_NC_019716(10),PHAGE_Phage_Gifsy_1_NC_010392(10),PHAGE_Entero_phiP27_NC_003356(7),PHAGE_Phage_Gifsy_2_NC_010393(7),PHAGE_Entero_YYZ_2008_NC_011356(6),PHAGE_Entero_DE3_NC_042057(6),PHAGE_Entero_lambda_NC_001416(6),PHAGE_Entero_HK629_NC_019711(5),PHAGE_Entero_HK630_NC_019723(5),PHAGE_Entero_BP_4795_NC_004813(5),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Klebsi_Pylas_NC_049444(2),PHAGE_Escher_SH2026Stx1_NC_049919(2),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Entero_c_1_NC_019706(2),PHAGE_Stx2_vB_EcoP_24B_NC_027984(1),PHAGE_Staphy_SPbeta_like_NC_029119(1),PHAGE_Shewan_1/41_NC_025458(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Erwini_vB_EamM_Alexandra_NC_047995(1),PHAGE_Bacter_APSE_2_NC_011551(1),PHAGE_Dickey_vB_DsoM_AD1_NC_048054(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Erwini_vB_EamM_Y3_NC_047880(1),PHAGE_Clostr_phiMMP03_NC_028959(1),PHAGE_Klebsi_KpCHEMY26_NC_049467(1),PHAGE_Bacill_PfEFR_4_NC_048641(1),PHAGE_Salmon_IME207_NC_031924(1),PHAGE_Salmon_64795_sal3_NC_031918(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Clostr_phiC2_NC_009231(1),PHAGE_Bacill_PfEFR_5_NC_031055(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Erwini_vB_EamM_Yoloswag_NC_047815(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Bacill_vB_BceS_MY192_NC_048633(1),PHAGE_Shigel_Stx_NC_029120(1),PHAGE_Geobac_E3_NC_029073(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Entero_phi80_NC_021190(1)   13                               34.21%                           52.54%                        
                                  10             30.2Kb                   questionable(80)              tail,integrase,transposase                   1998823-2029044          0                        12                      8                                0                                66.6%                            4                                yes                              8                                PHAGE_Salmon_SW9_NC_049459(1),PHAGE_Caulob_Sansa_NC_047756(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Salmon_SEN1_NC_029003(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Shigel_SfII_NC_021857(1),PHAGE_Pseudo_H101_NC_029094(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Cronob_vB_CsaM_GAP32_NC_019401(1),PHAGE_Pectob_CBB_NC_041878(1),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Entero_mEp235_NC_019708(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Entero_PsP3_NC_005340(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448(1),PHAGE_Yersin_fHe_Yen9_04_NC_042116(1)   1                                8.33%                            50.25%                        
                                  11             14Kb                     incomplete(50)                transposase,tail                             2238713-2252810          2                        22                      15                               2                                77.2%                            5                                no                               14                               PHAGE_Entero_933W_NC_000924(2),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Escher_P13374_NC_018846(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(2),PHAGE_Xantho_XcP1_NC_048147(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Serrat_MTx_NC_048759(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Entero_HK542_NC_019769(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Erwini_vB_EhrS_49_NC_048197(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Shigel_Sf6_NC_005344(1),PHAGE_Prochl_P_TIM68_NC_028955(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Salmon_118970_sal3_NC_031940(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Escher_phage_NC_004913(1),PHAGE_Phage_Gifsy_2_NC_010393(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Cronob_phiES15_NC_018454(1),PHAGE_Shigel_Stx_NC_029120(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Escher_ArgO145_NC_049918(1),PHAGE_Yersin_PY54_NC_005069(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Salmon_SSU5_NC_018843(1),PHAGE_Xantho_Carpasina_NC_047962(1),PHAGE_Erwini_vB_EhrS_59_NC_048198(1),PHAGE_Escher_FEC19_NC_048073(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Entero_HK225_NC_019717(1)   2                                9.09%                            48.76%                        
                                  12             54.1Kb                   intact(150)                   transposase,tail,integrase,capsid            2395165-2449287          4                        60                      50                               1                                85%                              9                                yes                              31                               PHAGE_Phage_Gifsy_2_NC_010393(6),PHAGE_Shigel_Stx_NC_029120(6),PHAGE_Shigel_POCJ13_NC_025434(5),PHAGE_Phage_Gifsy_1_NC_010392(5),PHAGE_Salmon_SPN3UB_NC_019545(5),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(5),PHAGE_Stx2_c_1717_NC_011357(4),PHAGE_Escher_ArgO145_NC_049918(3),PHAGE_Stx2_c_Stx2a_F451_NC_049924(3),PHAGE_Entero_phiP27_NC_003356(3),PHAGE_Escher_RCS47_NC_042128(3),PHAGE_Entero_933W_NC_000924(3),PHAGE_Stx2_II_NC_004914(3),PHAGE_Entero_VT2_Sakai_NC_000902(3),PHAGE_Shigel_Sf6_NC_005344(3),PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Cronob_phiES15_NC_018454(3),PHAGE_Entero_YYZ_2008_NC_011356(2),PHAGE_Salmon_118970_sal3_NC_031940(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Entero_mEp237_NC_019704(2),PHAGE_Entero_P1_NC_005856(2),PHAGE_Entero_WPhi_NC_005056(2),PHAGE_Escher_PA28_NC_041935(2),PHAGE_Entero_HK225_NC_019717(2),PHAGE_Entero_SfMu_NC_027382(2),PHAGE_Escher_Av_05_NC_025830(2),PHAGE_Escher_P13374_NC_018846(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Escher_SH2026Stx1_NC_049919(2),PHAGE_Entero_Mu_NC_000929(2),PHAGE_Klebsi_Pylas_NC_049444(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Escher_bV_EcoS_AKS96_NC_024789(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Mannhe_vB_MhS_587AP2_NC_028743(1),PHAGE_Rhodoc_Sleepyhead_NC_048782(1),PHAGE_Edward_eiAU_183_NC_023555(1),PHAGE_Escher_503458_NC_049341(1),PHAGE_Gordon_Horus_NC_048039(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Klebsi_KpCHEMY26_NC_049467(1),PHAGE_Entero_Tyrion_NC_031077(1),PHAGE_Erwini_phiEt88_NC_015295(1),PHAGE_Bacill_PfEFR_4_NC_048641(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Entero_DE3_NC_042057(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Entero_fiAA91_ss_NC_022750(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Salmon_ST64B_NC_004313(1),PHAGE_Salmon_SP_058_NC_021772(1),PHAGE_Salmon_SP_076_NC_021782(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Escher_C119_NC_042046(1),PHAGE_Salmon_Ent1_NC_019539(1),PHAGE_Mycoba_Mozy_NC_042323(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Entero_mEp213_NC_019720(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Erwini_vB_EamM_Alexandra_NC_047995(1),PHAGE_Escher_Pollock_NC_027381(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Edward_eiAU_NC_042029(1),PHAGE_Entero_P2_NC_001895(1),PHAGE_Serrat_Parlo_NC_048758(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Bacill_PfEFR_5_NC_031055(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Azospi_Cd_NC_010355(1),PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448(1),PHAGE_Bacill_vB_BceS_MY192_NC_048633(1),PHAGE_Pseudo_phiCTX_NC_003278(1),PHAGE_Plankt_PaV_LD_NC_016564(1),PHAGE_Pseudo_phi2_NC_030931(1),PHAGE_Gordon_BritBrat_NC_030942(1),PHAGE_Thalas_BA3_NC_009990(1),PHAGE_Sinorh_phiLM21_NC_029046(1),PHAGE_Escher_520873_NC_049344(1)   6                                10%                              49.52%                        
                                  13             5.5Kb                    incomplete(40)                transposase,tail                             2622956-2628464          0                        8                       7                                0                                87.5%                            1                                no                               5                                PHAGE_Salmon_Fels_1_NC_010391(1),PHAGE_Lactob_Lb_NC_047983(1),PHAGE_Shigel_SfIV_NC_022749(1),PHAGE_Phage_Gifsy_1_NC_010392(1),PHAGE_Brevib_Sundance_NC_028749(1)   2                                12.5%                            49.63%                        
                                  14             16.7Kb                   questionable(80)              terminase,head,portal,capsid,integrase       2642511-2659225          0                        26                      12                               11                               88.4%                            3                                yes                              11                               PHAGE_Salmon_118970_sal3_NC_031940(4),PHAGE_Salmon_ST64B_NC_004313(3),PHAGE_Geobac_E2_NC_009552(3),PHAGE_Shigel_SfII_NC_021857(3),PHAGE_Entero_P4_NC_001609(2),PHAGE_Psychr_Psymv2_NC_023734(2),PHAGE_Bacill_phi105_NC_048631(2),PHAGE_Shigel_SfIV_NC_022749(2),PHAGE_Entero_IME_EF4_NC_023551(1),PHAGE_Entero_EfaCPT1_NC_025465(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Altero_vB_AspP_H4/4_NC_047834(1),PHAGE_Entero_phi80_NC_021190(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Bacill_WBeta_NC_007734(1),PHAGE_Altero_vB_AmeM_PT11_V22_NC_048847(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Proteu_VB_PmiS_Isfahan_NC_041925(1),PHAGE_Entero_LY0322_NC_042125(1),PHAGE_Escher_HK75_NC_016160(1),PHAGE_Entero_SfV_NC_003444(1),PHAGE_Xantho_Xp10_NC_004902(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Entero_AUEF3_NC_042134(1),PHAGE_Stenot_S1_NC_011589(1),PHAGE_Bacill_phi105_NC_004167(1),PHAGE_Entero_phiSHEF2_NC_042021(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Strept_YDN12_NC_028974(1),PHAGE_Rhizob_16_3_NC_011103(1),PHAGE_Brucel_BiPBO1_NC_031264(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Xantho_phiL7_NC_012742(1),PHAGE_Entero_PMBT2_NC_042101(1),PHAGE_Burkho_KL3_NC_015266(1),PHAGE_Escher_ECP1_NC_049926(1)   2                                15.38%                           50.52%                        
                                  15             19.4Kb                   questionable(80)              recombinase,transposase,tail                 2725148-2744562          0                        13                      10                               0                                76.9%                            3                                yes                              7                                PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Salmon_HB_2014_NC_027329(2),PHAGE_Escher_HY02_NC_028872(2),PHAGE_Salmon_BPS15Q2_NC_031939(2),PHAGE_Staphy_SA1_NC_027991(1),PHAGE_Escher_wV8_NC_012749(1),PHAGE_Salmon_BPS17L1_NC_042096(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Escher_JH2_NC_029023(1),PHAGE_Burkho_Bcep176_NC_007497(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Entero_UAB_Phi87_NC_027360(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Escher_vB_EcoM_AYO145A_NC_028825(1),PHAGE_Bacill_Fah_NC_007814(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Burkho_Bcep22_NC_005262(1),PHAGE_Salmon_BPS17W1_NC_042097(1),PHAGE_Bacill_WBeta_NC_007734(1),PHAGE_Bacill_Gamma_NC_007458(1),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(1)   2                                15.38%                           48.91%                        
                                  16             5.1Kb                    questionable(70)              transposase                                  2779319-2784509          0                        9                       6                                1                                77.7%                            2                                no                               4                                PHAGE_Escher_SH2026Stx1_NC_049919(3),PHAGE_Stx2_c_Stx2a_F451_NC_049924(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Entero_BP_4795_NC_004813(2),PHAGE_Pseudo_MD8_NC_031091(1),PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Entero_HK022_NC_002166(1)   3                                33.33%                           51.03%                        
                                  17             46.5Kb                   intact(150)                   integrase,tail,transposase,lysis             2960602-3007128          0                        39                      27                               3                                76.9%                            9                                yes                              19                               PHAGE_Shigel_POCJ13_NC_025434(4),PHAGE_Shigel_Stx_NC_029120(4),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(3),PHAGE_Escher_SH2026Stx1_NC_049919(3),PHAGE_Stx2_c_Stx2a_F451_NC_049924(3),PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Phage_Gifsy_1_NC_010392(3),PHAGE_Entero_UAB_Phi20_NC_031019(2),PHAGE_Entero_933W_NC_000924(2),PHAGE_Pectob_ZF40_NC_019522(2),PHAGE_Entero_ES18_NC_006949(2),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Phage_Gifsy_2_NC_010393(2),PHAGE_Cronob_phiES15_NC_018454(2),PHAGE_Salmon_SPN3UB_NC_019545(2),PHAGE_Entero_Mu_NC_000929(2),PHAGE_Entero_SfMu_NC_027382(2),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Entero_P22_NC_002371(1),PHAGE_Escher_ArgO145_NC_049918(1),PHAGE_Escher_D108_NC_013594(1),PHAGE_Entero_mEp390_NC_019721(1),PHAGE_Salico_CGphi29_NC_020844(1),PHAGE_Burkho_phi1026b_NC_005284(1),PHAGE_Entero_P88_NC_026014(1),PHAGE_Escher_Av_05_NC_025830(1),PHAGE_Xantho_CP2_NC_020205(1),PHAGE_Entero_mEp460_NC_019716(1),PHAGE_Aeromo_PX29_NC_023688(1),PHAGE_Salmon_SPN1S_NC_016761(1),PHAGE_Escher_HK639_NC_016158(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Escher_500465_2_NC_049343(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Entero_lambda_NC_001416(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Entero_HK225_NC_019717(1),PHAGE_Entero_phiP27_NC_003356(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Entero_HK630_NC_019723(1),PHAGE_Salmon_118970_sal4_NC_030919(1),PHAGE_Escher_TL_2011b_NC_019445(1),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Entero_Tyrion_NC_031077(1),PHAGE_Entero_HK629_NC_019711(1),PHAGE_Serrat_Parlo_NC_048758(1),PHAGE_Entero_mEp237_NC_019704(1),PHAGE_Salmon_epsilon15_NC_004775(1),PHAGE_Pantoe_vB_PagM_LIET2_NC_048751(1)   4                                10.25%                           49.21%                        
                                  18             33.2Kb                   intact(118)                   NA                                           3063167-3096373          0                        46                      42                               3                                97.8%                            1                                yes                              6                                PHAGE_Klebsi_4LV2017_NC_047818(30),PHAGE_Escher_500465_1_NC_049342(28),PHAGE_Klebsi_ST512_KPC3phi13.2_NC_049452(22),PHAGE_Salmon_SEN8_NC_047753(20),PHAGE_Salmon_Fels_2_NC_010463(20),PHAGE_Klebsi_ST437_OXA245phi4.2_NC_049449(20),PHAGE_Salmon_RE_2010_NC_019488(17),PHAGE_Klebsi_ST15_OXA48phi14.1_NC_049454(10),PHAGE_Klebsi_ST13_OXA48phi12.1_NC_049453(5),PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448(4),PHAGE_Escher_P2_NC_041848(2),PHAGE_Escher_500465_2_NC_049343(2),PHAGE_Escher_pro483_NC_028943(2),PHAGE_Entero_HK106_NC_019768(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Salmon_SW9_NC_049459(1),PHAGE_Salmon_SEN1_NC_029003(1),PHAGE_Xantho_vB_XveM_DIBBI_NC_017981(1),PHAGE_Pasteu_F108_NC_008193(1),PHAGE_Erwini_EtG_NC_047833(1),PHAGE_Haemop_HP2_NC_003315(1),PHAGE_Escher_520873_NC_049344(1),PHAGE_Entero_HK97_NC_002167(1),PHAGE_Entero_186_NC_001317(1)   16                               65.21%                           51.22%                        
                                  19             10.4Kb                   incomplete(30)                tail,transposase                             3143658-3154082          0                        11                      7                                0                                63.6%                            4                                no                               7                                PHAGE_Salmon_SJ46_NC_031129(1),PHAGE_Klebsi_Miro_NC_041981(1),PHAGE_Prochl_Syn1_NC_015288(1),PHAGE_Erwini_vB_EamM_Kwan_NC_031010(1),PHAGE_Entero_phiEap_3_NC_041980(1),PHAGE_Cyanop_S_RIM32_NC_031235(1),PHAGE_Proteu_Privateer_NC_048861(1),PHAGE_Cyanop_S_RIM44_NC_047734(1),PHAGE_Erwini_vB_EamM_EarlPhillipIV_NC_031007(1),PHAGE_Synech_S_PM2_NC_006820(1),PHAGE_Cronob_vB_CsaP_GAP52_NC_019402(1),PHAGE_Cronob_CR5_NC_021531(1),PHAGE_Bacill_SP_15_NC_031245(1),PHAGE_Cronob_vB_CsaP_009_NC_048664(1),PHAGE_Erwini_Derbicus_NC_048173(1),PHAGE_Erwini_phiEaH2_NC_019929(1),PHAGE_Erwini_Wellington_NC_048016(1)   1                                9.09%                            52.77%                        
                                  20             70.7Kb                   intact(150)                   integrase,transposase,tail,head,capsid,portal,terminase     3167526-3238315          8                        65                      61                               1                                95.3%                            3                                yes                              31                               PHAGE_Phage_Gifsy_1_NC_010392(16),PHAGE_Entero_cdtI_NC_009514(13),PHAGE_Entero_mEp460_NC_019716(11),PHAGE_Entero_DE3_NC_042057(10),PHAGE_Entero_lambda_NC_001416(10),PHAGE_Entero_HK629_NC_019711(8),PHAGE_Entero_HK630_NC_019723(8),PHAGE_Salmon_Fels_1_NC_010391(7),PHAGE_Entero_phiP27_NC_003356(5),PHAGE_Entero_phi80_NC_021190(5),PHAGE_Phage_Gifsy_2_NC_010393(5),PHAGE_Salmon_SEN34_NC_028699(5),PHAGE_Entero_mEp237_NC_019704(4),PHAGE_Entero_N15_NC_001901(4),PHAGE_Entero_SfMu_NC_027382(4),PHAGE_Entero_HK225_NC_019717(4),PHAGE_Entero_YYZ_2008_NC_011356(4),PHAGE_Entero_Mu_NC_000929(4),PHAGE_Haemop_Aaphi23_NC_004827(3),PHAGE_Shigel_POCJ13_NC_025434(3),PHAGE_Escher_Lys12581Vzw_NC_049917(3),PHAGE_Stx2_c_Stx2a_F451_NC_049924(3),PHAGE_Escher_D108_NC_013594(3),PHAGE_Escher_ArgO145_NC_049918(3),PHAGE_Shigel_Sf6_NC_005344(3),PHAGE_Shigel_Stx_NC_029120(3),PHAGE_Entero_BP_4795_NC_004813(3),PHAGE_Entero_c_1_NC_019706(3),PHAGE_Stx2_c_1717_NC_011357(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Entero_Sf101_NC_027398(2),PHAGE_Vibrio_12B12_NC_021070(2),PHAGE_Stx2_vB_EcoP_24B_NC_027984(2),PHAGE_Stx2_c_86_NC_008464(2),PHAGE_Aggreg_S1249_NC_013597(2),PHAGE_Vibrio_CP_T1_NC_019457(2),PHAGE_Escher_SH2026Stx1_NC_049919(2),PHAGE_Entero_ST104_NC_005841(2),PHAGE_Entero_VT2phi_272_NC_028656(2),PHAGE_Salmon_g341c_NC_013059(1),PHAGE_Acinet_AB1_NC_042028(1),PHAGE_Mycoba_ArcherS7_NC_021348(1),PHAGE_Entero_SfI_NC_027339(1),PHAGE_Entero_IME10_NC_019501(1),PHAGE_Shigel_Ss_VASD_NC_028685(1),PHAGE_Acinet_IME_AB2_NC_041857(1),PHAGE_Pseudo_F10_NC_007805(1),PHAGE_Mycoba_MoMoMixon_NC_023733(1),PHAGE_Yersin_L_413C_NC_004745(1),PHAGE_Mycoba_Alice_NC_028986(1),PHAGE_Salmon_103203_sal5_NC_031946(1),PHAGE_Iodoba_phiPLPE_NC_011142(1),PHAGE_Escher_PA28_NC_041935(1),PHAGE_Mycoba_Bxz1_NC_004687(1),PHAGE_Entero_WPhi_NC_005056(1),PHAGE_Salmon_SPN3UB_NC_019545(1),PHAGE_Haemop_SuMu_NC_019455(1),PHAGE_Klebsi_Pylas_NC_049444(1),PHAGE_Pseudo_MP22_NC_009818(1),PHAGE_Entero_mEpX1_NC_019709(1),PHAGE_Escher_phage_NC_004913(1),PHAGE_Erwini_PEp14_NC_016767(1),PHAGE_Ralsto_RS138_NC_029107(1),PHAGE_Entero_HK633_NC_019719(1),PHAGE_Pseudo_phiPSA1_NC_024365(1),PHAGE_Edward_GF_2_NC_026611(1),PHAGE_Entero_Min27_NC_010237(1),PHAGE_Klebsi_JD001_NC_020204(1),PHAGE_Psychr_pOW20_A_NC_020841(1),PHAGE_Klebsi_vB_KpnM_KpV79_NC_042041(1),PHAGE_Salmon_SPN9CC_NC_017985(1),PHAGE_Bdello_phi1422_NC_019525(1),PHAGE_Rhodov_vB_RhkS_P1_NC_031059(1),PHAGE_Vibrio_X29_NC_024369(1),PHAGE_Salmon_HK620_NC_002730(1),PHAGE_Escher_P13374_NC_018846(1),PHAGE_Escher_Av_05_NC_025830(1),PHAGE_Entero_933W_NC_000924(1),PHAGE_Xantho_XcP1_NC_048147(1),PHAGE_Pectob_ZF40_NC_019522(1),PHAGE_Edward_MSW_3_NC_020082(1),PHAGE_Pseudo_EPa61_NC_048744(1),PHAGE_Escher_RCS47_NC_042128(1),PHAGE_Mycoba_Lukilu_NC_041901(1),PHAGE_Vibrio_vB_VchM_138_NC_019518(1),PHAGE_Escher_Pollock_NC_027381(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Escher_PA2_NC_028449(1),PHAGE_Pseudo_Pa193_NC_050148(1)   16                               24.61%                           52.01%                        
                                  21             16.8Kb                   questionable(80)              transposase,head,coat,portal,terminase       3644826-3661700          0                        16                      16                               0                                100%                             0                                no                               8                                PHAGE_Entero_IME10_NC_019501(9),PHAGE_Salmon_UPF_BP1_NC_047875(8),PHAGE_Shigel_Sf6_NC_005344(7),PHAGE_Salmon_118970_sal4_NC_030919(6),PHAGE_Entero_Sf101_NC_027398(5),PHAGE_Entero_UAB_Phi20_NC_031019(5),PHAGE_Salmon_SPN9CC_NC_017985(4),PHAGE_Salmon_HK620_NC_002730(4),PHAGE_Salmon_103203_sal5_NC_031946(3),PHAGE_Salmon_BTP1_NC_042346(2),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Salmon_SEN22_NC_028696(2),PHAGE_Salmon_vB_SenS_Sasha_NC_047786(1),PHAGE_Entero_BP_4795_NC_004813(1),PHAGE_Stx2_II_NC_004914(1),PHAGE_Entero_VT2phi_272_NC_028656(1),PHAGE_Salmon_epsilon34_NC_011976(1),PHAGE_Salmon_SE1_NC_011802(1),PHAGE_Entero_IME_EC2_NC_047742(1),PHAGE_Stx2_c_1717_NC_011357(1),PHAGE_Entero_ST104_NC_005841(1),PHAGE_Stx2_c_Stx2a_WGPS9_NC_049923(1),PHAGE_Salmon_ST160_NC_014900(1)   9                                56.25%                           51.41%                        
                                  22             29.6Kb                   questionable(80)              integrase,transposase,tail                   4111763-4141373          0                        17                      11                               0                                64.7%                            6                                yes                              7                                PHAGE_Shigel_SfIV_NC_022749(3),PHAGE_Shigel_SfII_NC_021857(2),PHAGE_Shigel_Sf6_NC_005344(2),PHAGE_Escher_RCS47_NC_042128(2),PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640(1),PHAGE_Thermu_P7426_NC_009804(1),PHAGE_Brevib_Jenst_NC_028805(1),PHAGE_Strept_SM1_NC_004996(1),PHAGE_Gordon_Bowser_NC_030930(1),PHAGE_Escher_ArgO145_NC_049918(1),PHAGE_Entero_P1_NC_005856(1),PHAGE_Bacill_vB_BtS_B83_NC_048762(1),PHAGE_Stx2_c_86_NC_008464(1),PHAGE_Escher_phi191_NC_028660(1),PHAGE_Entero_YYZ_2008_NC_011356(1),PHAGE_Entero_VT2_Sakai_NC_000902(1),PHAGE_Mycoba_32HC_NC_023602(1),PHAGE_Thermu_P2345_NC_009803(1),PHAGE_Mycoba_Redi_NC_023730(1)   4                                17.64%                           47.59%                        
                                  23             6.6Kb                    incomplete(50)                transposase                                  4146337-4153001          0                        8                       6                                0                                75%                              2                                no                               4                                PHAGE_Stx2_c_1717_NC_011357(3),PHAGE_Escher_SH2026Stx1_NC_049919(3),PHAGE_Stx2_c_Stx2a_F451_NC_049924(3),PHAGE_Bacill_vB_BmeM_Goe8_NC_048797(2),PHAGE_Dickey_vB_DsoM_AD1_NC_048054(1),PHAGE_Erwini_vB_EamM_Y3_NC_047880(1),PHAGE_Erwini_vB_EamM_Desertfox_NC_042098(1),PHAGE_Clostr_phiCD211_NC_029048(1),PHAGE_Erwini_vB_EamM_Deimos_Minion_NC_041972(1),PHAGE_Entero_BP_4795_NC_004813(1)   3                                37.5%                            51.67%                        
