gi|00000000|ref|CP085929.1|  Lachnospiraceae bacterium GAM79 strain FDAARGOS_1582 chromosome, 2979054, gc%: 41.42%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(925308..926690)         PHAGE_Spirop_1_R8A2B_NC_001365: putative transposase; LK424_04110; phage(gi9626114)     6.04e-06            LachnospiraceaebacteriumGAM79MSEHNQKHLTLSNRTYIEQELLQKSTFSSIGEVLHKDPSTISKEVKRYSKTVPAKHSYKCNLCKHYKDCDLLSSELHCQSYHNRYCSFYCKRCYRRNPTNVCPYFLPYKCDKINKPPYVCNYCEDYKSCPLDKKIYDASYAQRQYEKNLYNSRKGINMTPEELQELNDLISPLILKGQPLSHIFAVHADEIPVCRRTLYNYLDQRVFQARNIDLPRRVRYKKRKKKSEPRKNKNLQQVYRNKRTYVDFERFMEAHPDLDVVEMDTVKGGRDKGKYLLTLLFRSCSFMIVILMPDCTQRSVIKAINDLTEVLGIRTFKKYFPVILTDNGSEFKNPWDIEKTESGTHRTYVFYCDPYVSNQKGRLEKNHEYIRYVIPKGRSMYRYTQDDINLMTSHINSTARDSLNGATPFDLAALLLDAKIPALAGQVRIPADDVCLKPSLIEDNVSKRNKASTEGGDING
926969..927238                     PHAGE_Bacter_Lily_NC_028841: Xre-like protein; LK424_04115; phage(gi971748289)       5.59e-10            LachnospiraceaebacteriumGAM79MAVSYNKLWKLMIDKKINKSQLCKKIKISSSTMAKMTNEEMVAMTVLEKICAELECDISDIMEFTDLAEVKKKIHKENTSPDNGTVNVR
927254..928525                     PHAGE_Natria_PhiCh1_NC_004084: M.PhiCh1-II; LK424_04120; phage(gi22091184)           1.74e-22            LachnospiraceaebacteriumGAM79MNENGLNYIDLFAGAGGLSEGFIQSGYRPVAHVEMNEHAAKTIETRIAYYYLKDNGKIKSYYDYEKGKITREQLLEKIPKEELKTVINQEMSESTIKGIFNTIDDIKREKEIDKIDVIIGGPPCQAYSLVGRAQSSHMIVPMEDDPRNELYKMYVQFLKKYKPRMFVFENVAGIKTARGGVAFKNLQTYMKRVGYEIDYHELNAQNFGVLQSRKRVIIVGWLKGTGYEYPSFDVIHSKAEVWDLLKDLPPLTPGIEAREHTMNDMRRLKKYVKDNGIRMKSDVLTGHAARPHTAQDIEIYKRTIDMWFENEQHERLKYDDLPEDLKTHKNRTSFVDRFKVVEGDMDHCHTILAHLSKDGHYFIHPDIEQHRSITVREAARIQSFPDNYYFEGPRTAQFVQVGNAVPPMMAKVIADKIKEQLRK
928543..931131                     PHAGE_Bacill_0305phi8_36_NC_009760: RecQ helicase; LK424_04125; phage(gi156564053)     8.46e-13            LachnospiraceaebacteriumGAM79MGIVESTYAELKQQELKNNPYSCLHMADIDINPHQVEAFTFALSSLKLGGAILADEVGLGKTIEAGLVIKYLLCSGKNKILLIMPSNLRKQWQVELEEKFDIDSLIVDSSNWEDYLAKVKSKQAVIIASYHFASKRKAEFGKIAWDFCVFDEAHRLRNVYKNGSKMANSLYELTKGIPKILLTATPMQNTLLDIYGLVQFIDDRVFYSKQIFSERYLRGEDYNDLKACLEPVVQRTLRKEVAEYIQFSERKEMTIDFELSPMEIELYVMINNYLKKEILYALPNSHRTLITSVIRKLLASSSMAVAETFKVLKGRLETLKETTRTESADESIDFFLSFFDDDEIEKDDDSKQDELYTREKVNEFIQHEIDEVTAIINKAESIKRNAKMTALKQAVEKAFVFQNEAGIKQRIVVFTESIRTQQYMFEELSHAGYEGQILKFNGSTNDPVTKQIYKAWKARNYGKYVGSRNVELKNAIVEAFRDEYKILLVTDSGSEGLNLQFCNTIINYDLPWNPQKIEQRIGRCHRYGQKNDVVVINLLNTQNVADKRVYEILSEKFELFQGVFGASDKAIGLLESGADFEKRVTLIYQECKTTSDFTKQFKNLEKELEKKRNKKMDELKSIFTYKTEEQHKLHFNSIMEEIAEYDSQFEYWNGRSKEENGTCPKYYETNIDLEIPGIQHGYLLVGGSYVGEILEDAVFEIIDITGKIYGVSDELARELCEKLQEQCLEEKTPNNQEILSYIDKVDEFMQQKYAESKRTVLIANQKKLDNWLQLRKEEYLLRVKDTSELDELKEKYAIEGDFRQKIALKKQIEILEEQKQKMVRAFHDEMSTLEEEAVNMQKQFAEDILVNTQLVTKIVIKF
931141..932661                     PHAGE_Escher_Murica_NC_041871: tail lysozyme; LK424_04130; phage(gi100423)           6.40e-50            LachnospiraceaebacteriumGAM79MEKKGKLELTWVGKYEEEKLEPRILIEDKSKSYGDPDTENMLIHGDNLLALKALENKFRGRVKCIYIDPPYNTGSAFAQYDDNLEHSIWLSMIRKRLLILKELLSEDGTIWISIDDDEQAYLKVLCDEIFMRSNFVSNVIWEKKFSPQNDAKWLSDSHDFILVYAKNKNLWKPNLLPRTAGMNSRYKNPDNDPRGPWTSSDFTARTYSGNTDYPITTPSGRVVTPTKSRSWISSKEEFDRLVSDNRIWFGINGNNVPRKKTFLSEVKSGSVPMTIWKYEDVGSTQDAKKEVKQINPEDPFATPKPEKLIERILEIATKPGDIILDSFLGSGTTIAVAHKMNRRWIGVEIGEQAYNQCKLRLDKVIDGNDGLDISKKLGWQGGGGYKFYELAEPLLVKNKVLPVYQINPSYTWDMVCEAICKIEGFTYEPSGEFQGHSSENRFIHITEEFVNTKYVMSIMKNLGDKQSLLIYCKKNQADMILPENVEVKKIPKDLLDKCNFESEVQE
932661..935393                     PHAGE_Entero_P1_NC_005856: Res; LK424_04135; phage(gi46401632)                       1.85e-06            LachnospiraceaebacteriumGAM79MSSVDKIKWAMSLRDPQYEALQYFDAISSKIEYRTSSKAEAEKIASENCQAPHTISVDKEFDFPSFCFDMTTGIGKPRLMGACIYYLYKTKGYKHFFILAPGNTIYDKMRREAVPGHPKYMFKGLEAEMGRPKVYDGENYLSYPVRYIQEEMVVEKTSDIQIFIFNISKIFTRGDIEFKFHKFNENLGGSFADVLRSFDDLVICMDEAHRYYAPASKKAINYLNPVLGLEYTATPKSTNKNIIYHYGLEDGAGKFLKIPVVMGRTNTAGYSVDDIEEMKLKDGIKLHERRKSIVYKYCIDNQLEQVKPIVLIACKDTTHARKIKEKIDSDAFFGGRYVGKVIEIDSSTSGAETEENIQKLLTIEKNTNPIEIVLHVYKLKEGWDVNNLFTIIPLNAAKSDILALQTIGRGLRLPFGEITGIEELDTLDIVAHDHYREIVDDIKNNPVFKKRNLDEEDIPNTKTVMVEPAVENQQISLFDEALCESKVKSYQDLNNENVVENLFAEYQKAFVKKVAPKKSESDSGQMSIFDYFANDNEKETNDGTASEHKMTQTGMGTDAVDTSFTVHQGDASLQIDLQKSSGSKNVLPYAKQEFIKKVEELKKVAISVPKIGISYSSTITFKSFTVKRNIMDFDVAASRIERYDAVNGKLLQVLDADALIVENPENMLAVSLLESIPEFSSDDAEFILEVVDQYLALIEGTDEEKKKIVRRYATVIVEDLRKQIYASKEESTEFVFNVQKDLIVFKSFAKNMKENGRLNFKKEVPDKKNIKQYLFEGYKKSYYAENAFDSDDERRLSVVLEEDSEVIRFIKPPLNQLGLFYKAAKQYNPDFLVETADKKYMIEVKAANQTDNEDVQEKAKAAIKWCECASQVDADGKTWEYRLVPGDKIIVGNTFKYVIGMAIPVVVDGE

#### region 2 ####
1326219..1326230                   attL                                                                                 N/A                 TTTGTGTTATAT
1338594..1339394                   PHAGE_Mycoba_Courthouse_NC_023690: gp146; LK424_05855; phage(gi593774424)            1.38e-05            LachnospiraceaebacteriumGAM79MKQNWFLLGDIHGEAAAIEYFYNHHRERLKLDDCQNNIILLGDVGLNYSITGLADFYYKTSLSKLPFTYICLRGNHESRVSDVIKRNPSRWNPIEKYGGLVYVENDFPNIEYLVDGPAIYEFADYKTLSLPGAYSVDKWLRLANGWQWFADEQLSEEEMQYGRMLVNHEKSVDLVISHTCPIEFEPNDLFLGSIDQSQVDKTMELYLGEIENQLDYRRWAWGHYHADRLYPWKDGKEKLMLFNEHVVDLCKFMEMGKADYFVDILA
1339419..1340447                   hypothetical protein; LK424_05860                                                    N/A                 LachnospiraceaebacteriumGAM79MPTKINVNGKYPCCANWVVMKRTRDGVIAKNCLIDETIKLSDREARYLTRLNGNRNPYRMKGFSADECTSYFRFLKECMLVREAGRSMHIDEMKLYTLIIPNKTRTNSVIPRILNFLLCILFLPVFAYGLYCIFAYENTWGMEDLTILNILLGSIGGIFLGTILHESAHAFSCLSDENGRVFEAGVMLNGMFLGAYVLIDESKIKSNTKRAQINLAGVEMNLLLAGVLMILATFGNFLRPWKVALLFAALQNVFLVLMNLAFTEGLDGEHALSSLFGGFVVDAAKANLSVLFDRQRRVDYFAVHGICGAANICVSLVILVFQFIVPLVVVADISIWIGALFQ
1340462..1340878                   hypothetical protein; LK424_05865                                                    N/A                 LachnospiraceaebacteriumGAM79MAKLVIGAVNVGMILYSSVCSGLTCTFGLWGIATAVGILCLAVKSVSFIKKNESIWMFVLVLFVTIPFNVRLATVAVEECFAEINVFSKILYIVMVCMSLLSAEEIFIGLLTRFIWPRQDESFISELKKIDENIDQNG
1340886..1341632                   PHAGE_Clostr_phiCD211_NC_029048: Serine/threonine protein phosphatase; LK424_05870; phage(gi981220913)     6.02e-13            LachnospiraceaebacteriumGAM79MLYLISDIHGNLLEFKQILKKIEFDGEKDNLIIMGDILDRGPDGIALLRYVKPYILDNSMELLLGNHELFAVMYLNGVLGKKNTDKVLDERTWTAFGGGDTLKSIKNMTAFEKKNLLSFLEHLPIYSEISSRYLGNVIVTHTGIDCNNYVMNADGTINVKSSIKKAFENNIYSYMVGMDLHQVPKKDKERFDQFIIVGHVPCFRLNKDMSNKFYRTDYYMDIDAGAGHMEQGGTLGCYCVTTDEEIYL
1341657..1341992                   RNA-binding protein; LK424_05875                                                     N/A                 LachnospiraceaebacteriumGAM79MLHEMRLKPDPFEGIEAGKKKIEFRLCDEKRRLIKPGDKILFTNTDTGQNILTYVVDIHKADSFVQLKEVLVKKNLIEENDFEPSTMLKYYSSEEEKEYGVVGVEIALLSD
1342054..1342719                   PHAGE_Salmon_SEN5_NC_028701: tail fiber protein; LK424_05880; phage(gi966201575)     1.19e-27            LachnospiraceaebacteriumGAM79MKGNGKVKFLDKIYIIDIDEKMIDSLMKYFQWETNVELCCCDIESFLKDHIEKIDGVTSAANSFGIMDGGLDKALVDFFGEQLQSNVQRVIQKEFLGEQPVGTCLTIDIPGYNKKILHTPTMRIPQPILDPQIIYTATRSTLVEAIKNQIFTITLPAFGHLTGNVKSEIVAQYMRMAYDDVKKTLQENSSINTWEFVYENKNIDGVLFKSYLLGNSPHNKQ
complement(1342748..1342945)       PHAGE_Bacill_1_NC_009737: predicted transcription regulator; LK424_05885; phage(gi158348425)     3.61e-09            LachnospiraceaebacteriumGAM79MAVVNNLKEIRESRGIIQDDLAAATGFCTRTISRIERGKCTPSAEFMLRISAYFNLLVEDVFHIE
complement(1343044..1343487)       PHAGE_Strept_phiARI0131_2_NC_031941: hypothetical protein; LK424_05890; phage(gi100035)     1.31e-20            LachnospiraceaebacteriumGAM79MHASGKYEKHVCQIIPFRRAITVYENAVSAGTGNFLEDGPSRTLNIDEALLPENTSFGVKISGDSMEPEFHDGDIAWVVKQETVENGEIGIFSLNGDAYIKKLREDKEGIFLVSLNKKYAPIRVSENDRFDVFGKVVETGSATDLSI
1343509..1343865                   DNA polymerase IV; LK424_05895                                                       N/A                 LachnospiraceaebacteriumGAM79DLYSFTRQMKIDHATNITSEITEYAYRLFKENYNWSKTIRSIGVRGADLVTDKYWEQIDLFDDISRREKMMKADAAVDDIRRRFGYYSVQRGLMYMDSYLSKINAKEDHTVHPHGYFG
1343963..1344175                   PHAGE_Bacill_Wip1_NC_022094: putative LexA-like repressor; LK424_05900; phage(gi530787682)     7.57e-05            LachnospiraceaebacteriumGAM79MYYDLNEKTTVVYMFICNFNREHGYSPTVREIGKHVGLKSTSSVQAYLKKLEECGYSARLKDCPRTIKIC
1344201..1344443                   hypothetical protein; LK424_05905                                                    N/A                 LachnospiraceaebacteriumGAM79MSNKVYVDVLAEFTTDGILIPRSLCWKDGTVYEIQRVNNMRRATSLKAGGVGMRYTCMIDGRERHLYYEDNNLWFVEGRA
1344607..1344810                   hypothetical protein; LK424_05910                                                    N/A                 LachnospiraceaebacteriumGAM79MNNKDVIEIRCRQCKKLMMNYHVCGDDSAVALQGIGVKCDRCKRVMILKEYTEGMLISRLIDGAFRI
1345043..1345318                   PHAGE_Burkho_BcepC6B_NC_005887: putative prophage repressor protein; LK424_05915; phage(gi48697234)     1.15e-06            LachnospiraceaebacteriumGAM79MMMEVGQRIQDIRIENEVTGAQLGACLGINGNQVSRIETGVARCSIYQLVLICQEFGCSADYLLFGKKNTGMSKEQTELITRLYESIQNRP
1345387..1345872                   hypothetical protein; LK424_05920                                                    N/A                 LachnospiraceaebacteriumGAM79MHTRQDADWNKKRYECTNIGFKFYRKKESDMRFTRSNVNEFKREHEVMGVGFIKSRKSVDKIMDMAADMLDKAKSVELPIVEIIVDEGASDDIDRAKVTSLCEWMEKDYVKVIFVREINDITKDRDDLEAFLLKARDLDVMVYVLNTGVQVKAEPDNGAGC
1345866..1346060                   hypothetical protein; LK424_05925                                                    N/A                 LachnospiraceaebacteriumGAM79MLETDQKASEPVTENLIGIRFTITDYGTIVRAGDGSVIGIYPTEDEALEDVRERCMGVLSSTKT
1346125..1346553                   recombinase family protein; LK424_05930                                              N/A                 LachnospiraceaebacteriumGAM79MRRKGRNKKPLMTNPTRCIVILSLDEQHNEIKAEEAENRQLNRIREFTKQNNLIPVAIVRRGIMGRVVYNRYFSGAIECMRQGKAEVVVCVNMDTIYYGIADAYYRVGLIKEAGFRIFTVDEKEPMMHLYMPPKKGVFTDED
1346543..1346947                   PHAGE_Lactob_3_521_NC_048753: tail fiber protein; LK424_05935; phage(gi100052)       1.98e-07            LachnospiraceaebacteriumGAM79MKIRRNMVIWAELKNQGKCVQTGIRPCVVISNNTANAHSPVFTVMPGTTQDKKKDFPVHVKVTAKDVNGRLYKDTFFMGEQMCTIGERQIINVFGEIKDEGVIQQINEVIVRELALDNENLNRGEQNVLDNGQQ
1346928..1347149                   helix-turn-helix domain-containing protein; LK424_05940                              N/A                 LachnospiraceaebacteriumGAM79MITDNSKEVQGQVPIYQKVTLTIKEAAEYSNIGINRIESLLRAPRCPFVLYVGKKKLVKRKEFEKFISENIEI
1347069..1347080                   attR                                                                                 N/A                 TTTGTGTTATAT
1347276..1348415                   PHAGE_Bacill_phi4B1_NC_028886: site-specific recombinase; LK424_05945; phage(gi971821285)     5.27e-26            LachnospiraceaebacteriumGAM79MGKSLKGKELGVGISQQTNGLYVARFTDRFGRRKSKRFKKLQECRQWIADATYIDEHSDLENATDMLVDAWFEYWIDLKKKTVRPNTVRNYSERYERNIKNVIENKLLTEVKPIHCQKIFSDMADEGYKTTTIYQTRIALYNMLEFAKENEVIITNPCKKSVKSDIGKPSDKKEALTIDDQRRFLAAAKGQSYEYQYRFALQTGLRTGELVGLKWEDINFERKTLTIERSMEFRYKVGEWRVGPPKSKSGYRTIPLTDEAICILKAQKEKNRKIKVIDKEWADTVFLCRKGQPVKNSTYDTALFKICDKAGIKRFSMHVLRHTFATRCIEGGMMPKTLQKILGHSNIGITMNLYVHITEEEKQKEIDLVAEALKAGVAI
