Criteria for scoring prophage regions (as intact, questionable, or incomplete):
Method 1:
1. If the number of certain phage organism in this table is more than or equal to 100% of the total number of CDS of the region,
   the region is marked with total score 150. If less than 100%, method 2 and 3 will be used.

Method 2:
1. If the number of certain phage organism in this table  is more than 50% of the total number of CDS of the region, that phage 
   organism is considered as the major potential phage for that region; the percentage of the total number
   of that phage organism in this table in the  total number of proteins of the region is calculated and 
   then multipled by 100; the percentage of the length of that phage organism in this table in the length 
   of the region is calculated and then multipled by 50 (phage head's encapsulation capability is considered).

Method 3:
1. If any of the specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber',
   'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin') are present, the score will be increased 
   by 10 for each keyword found.
2. If the size of the region is greater than 30 Kb, the score will be increased by 10.
3. If there are at least 40 proteins in the region, the score will be increased by 10.
4. If all of the phage-related proteins and hypothetical proteins constitute more than 70% of
   the total number of proteins in the region, the score will be increased by 10.

Compared the total score of method 2 with the total score of method 3, the bigger one is chosen as the total score of the region.
If the region's total score is less than 70, it is marked as incomplete; if between 70 to 90, it is marked as questionable; if greater than 90, it is marked as intact.
   


Totally 6 intact prophage regions have been identified.




                                  REGION         REGION_LENGTH            COMPLETENESS(score)           SPECIFIC_KEYWORD                             REGION_POSITION          TRNA_NUM                 TOTAL_PROTEIN_NUM       PHAGE_HIT_PROTEIN_NUM            HYPOTHETICAL_PROTEIN_NUM         PHAGE+HYPO_PROTEIN_PERCENTAGE    BACTERIAL_PROTEIN_NUM            ATT_SITE_SHOWUP                  PHAGE_SPECIES_NUM                MOST_COMMON_PHAGE_NAME(hit_genes_count)    FIRST_MOST_COMMON_PHAGE_NUM      FIRST_MOST_COMMON_PHAGE_PERCENTAGE   GC_PERCENTAGE                 
                                 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
                                  1              48.9Kb                   intact(150)                   integrase,lysin,terminase,capsid,head,tail     59087-108074             1                        54                      48                               6                                100%                             0                                yes                              21                               PHAGE_Entero_vB_IME197_NC_028671(14),PHAGE_Entero_phiEf11_NC_013696(13),PHAGE_Entero_phiFL3A_NC_013648(11),PHAGE_Entero_phiFL1A_NC_013646(10),PHAGE_Bacill_BCJA1c_NC_006557(10),PHAGE_Entero_phiFL2A_NC_013643(8),PHAGE_Strept_PH15_NC_010945(5),PHAGE_Lactob_phig1e_NC_004305(5),PHAGE_Strept_phiARI0468_4_NC_031915(5),PHAGE_Lister_B054_NC_009813(5),PHAGE_Strept_MM1_NC_003050(4),PHAGE_Entero_EFC_1_NC_025453(4),PHAGE_Strept_315.4_NC_004587(4),PHAGE_Lister_A500_NC_009810(4),PHAGE_Strept_315.3_NC_004586(3),PHAGE_Strept_phiBHN167_NC_022791(3),PHAGE_Strept_SM1_NC_004996(3),PHAGE_Lactob_Sha1_NC_019489(3),PHAGE_Strept_A25_NC_028697(3),PHAGE_Temper_phiNIH1.1_NC_003157(3),PHAGE_Lister_LP_030_3_NC_024384(2),PHAGE_Lactob_iLp1308_NC_028911(2),PHAGE_Bacill_250_NC_029024(2),PHAGE_Erysip_SE_1_NC_029078(2),PHAGE_Strept_5093_NC_012753(2),PHAGE_Brocho_NF5_NC_015252(2),PHAGE_Lister_A118_NC_003216(2),PHAGE_Entero_EF62phi_NC_017732(2),PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640(2),PHAGE_Brocho_BL3_NC_015254(2),PHAGE_Entero_IME_EFm1_NC_024356(1),PHAGE_Lactob_8014_B2_NC_047739(1),PHAGE_Lister_A006_NC_009815(1),PHAGE_Lactob_CL2_NC_028835(1),PHAGE_Entero_EFLK1_NC_029026(1),PHAGE_Bacill_Carmen17_NC_048698(1),PHAGE_Lactob_Lb_NC_047983(1),PHAGE_Staphy_ROSA_NC_007058(1),PHAGE_Entero_phi92_NC_023693(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Entero_EfV12_phi1_NC_048087(1),PHAGE_Bacill_IEBH_NC_011167(1),PHAGE_Arthro_Shade_NC_042015(1),PHAGE_Lactob_PL_1_NC_022757(1),PHAGE_Lactob_phiJB_NC_022775(1),PHAGE_Clostr_phiCT19406C_NC_029006(1),PHAGE_Arthro_Sonny_NC_041933(1),PHAGE_Staphy_PH15_NC_008723(1),PHAGE_Entero_vB_EfaP_Efmus4_NC_049935(1),PHAGE_Staphy_CNPx_NC_031241(1),PHAGE_Lactob_P1_NC_047764(1),PHAGE_Salmon_vB_SosS_Oslo_NC_018279(1),PHAGE_Oenoco_phiS13_NC_023560(1),PHAGE_Entero_EFP01_NC_047796(1),PHAGE_Lister_LP_030_2_NC_021539(1),PHAGE_Clostr_phiCD27_NC_011398(1),PHAGE_Lactob_LP65_NC_006565(1),PHAGE_Lister_2389_NC_003291(1),PHAGE_Entero_phiEF24C_NC_009904(1),PHAGE_Entero_HK022_NC_002166(1),PHAGE_Lister_vB_LmoS_188_NC_028871(1),PHAGE_Bacill_BMBtp2_NC_019912(1),PHAGE_Lister_LP_101_NC_024387(1),PHAGE_Weisse_WCP30_NC_031101(1),PHAGE_Bacill_TP21_L_NC_011645(1),PHAGE_Staphy_JS01_NC_021773(1),PHAGE_Bacill_vB_BtS_B83_NC_048762(1),PHAGE_Arthro_Zartrosa_NC_049468(1),PHAGE_Bacill_SP_15_NC_031245(1),PHAGE_Entero_P22_NC_002371(1),PHAGE_Oenoco_phiS11_NC_023571(1),PHAGE_Entero_IME_EFm5_NC_028826(1),PHAGE_Bacill_PBC1_NC_017976(1),PHAGE_Entero_HK544_NC_019767(1),PHAGE_Sphing_PAU_NC_019521(1),PHAGE_Lactob_Lpa804_NC_048134(1),PHAGE_Entero_HK446_NC_019714(1),PHAGE_Entero_EFDG1_NC_029009(1),PHAGE_Staphy_SA780ruMSSAST101_NC_048711(1),PHAGE_Staphy_Slt_NC_002661(1),PHAGE_Deep_s_D6E_NC_019544(1),PHAGE_Bacill_phi4B1_NC_028886(1),PHAGE_Staphy_187_NC_007047(1),PHAGE_Lactob_LL_H_NC_009554(1),PHAGE_Entero_vB_EfaP_Ef7.4_NC_049940(1),PHAGE_Lactoc_28201_NC_031013(1),PHAGE_Lactob_CL1_NC_028888(1),PHAGE_Lister_vB_LmoS_293_NC_028929(1),PHAGE_Arthro_Martha_NC_041932(1),PHAGE_Strept_315.2_NC_004585(1),PHAGE_Staphy_SPbeta_like_NC_029119(1),PHAGE_Strept_phiNJ2_NC_019418(1)   13                               25.92%                           36.10%                        
                                  2              79.2Kb                   intact(150)                   integrase,tail,terminase,protease,capsid,lysin,head     971763-1051026           3                        111                     85                               22                               96.3%                            4                                yes                              40                               PHAGE_Lister_2389_NC_003291(14),PHAGE_Lister_LP_030_2_NC_021539(12),PHAGE_Entero_vB_IME197_NC_028671(11),PHAGE_Entero_phiFL1A_NC_013646(11),PHAGE_Bacill_phBC6A52_NC_004821(11),PHAGE_Entero_phiFL2A_NC_013643(10),PHAGE_Lactob_PLE2_NC_031036(9),PHAGE_Entero_phiFL3A_NC_013648(8),PHAGE_Entero_phiEf11_NC_013696(7),PHAGE_Lactob_iA2_NC_028830(7),PHAGE_Clostr_phiCD6356_NC_015262(6),PHAGE_Lister_B054_NC_009813(4),PHAGE_Entero_EFC_1_NC_025453(4),PHAGE_Brocho_NF5_NC_015252(4),PHAGE_Entero_phiFL4A_NC_013644(4),PHAGE_Strept_315.2_NC_004585(3),PHAGE_Erysip_SE_1_NC_029078(3),PHAGE_Strept_EJ_1_NC_005294(3),PHAGE_Strept_315.1_NC_004584(3),PHAGE_Strept_phiBHN167_NC_022791(3),PHAGE_Lister_B025_NC_009812(3),PHAGE_Temper_phiNIH1.1_NC_003157(2),PHAGE_Strept_phiNJ2_NC_019418(2),PHAGE_Lactob_LF1_NC_019486(2),PHAGE_Lactoc_ul36_NC_004066(2),PHAGE_Strept_315.4_NC_004587(2),PHAGE_Brocho_BL3_NC_015254(2),PHAGE_Staphy_187_NC_007047(2),PHAGE_Strept_phiARI0746_NC_031907(2),PHAGE_Entero_EF62phi_NC_017732(2),PHAGE_Staphy_SA345ruMSSAST8_NC_048713(2),PHAGE_Lactoc_PLgT_1_NC_031016(2),PHAGE_Strept_9871_NC_031069(2),PHAGE_Aeriba_AP45_NC_048651(2),PHAGE_Lactob_Ld25A_NC_025415(2),PHAGE_Bacill_vB_BhaS_171_NC_030904(2),PHAGE_Strept_9873_NC_047763(2),PHAGE_Lactoc_lato_NC_004746(2),PHAGE_Clostr_phi3626_NC_003524(2),PHAGE_Strept_9872_NC_031094(2),PHAGE_Lactob_BH1_NC_048737(2),PHAGE_Bacill_Waukesha92_NC_025424(1),PHAGE_Strept_9874_NC_031023(1),PHAGE_Thermu_OH2_NC_021784(1),PHAGE_Lactoc_bIL309_NC_002668(1),PHAGE_Lactob_LJ_NC_048680(1),PHAGE_Clostr_phiSM101_NC_008265(1),PHAGE_Staphy_phiETA2_NC_008798(1),PHAGE_Lactoc_50101_NC_031040(1),PHAGE_Strept_TP_J34_NC_020197(1),PHAGE_Lactoc_P1045_NC_049812(1),PHAGE_Staphy_IME_SA4_NC_029025(1),PHAGE_Klebsi_Matisse_NC_028750(1),PHAGE_Lactob_Lenus_NC_047897(1),PHAGE_Lactoc_TP901_1_NC_002747(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Staphy_Ipla7_NC_018284(1),PHAGE_Staphy_42E_NC_007052(1),PHAGE_Lactoc_bIL285_NC_002666(1),PHAGE_Lister_LP_HM00113468_NC_049900(1),PHAGE_Paenib_HB10c2_NC_028758(1),PHAGE_Entero_vB_EfaS_AL3_NC_042126(1),PHAGE_Weisse_phiYS61_NC_018270(1),PHAGE_Strept_T12_NC_028700(1),PHAGE_Bacill_phi4B1_NC_028886(1),PHAGE_Staphy_Slt_NC_002661(1),PHAGE_Deep_s_D6E_NC_019544(1),PHAGE_Bacill_PM1_NC_020883(1),PHAGE_Bacill_Shbh1_NC_030925(1),PHAGE_Lactob_Ld3_NC_025421(1),PHAGE_Staphy_B236_NC_028915(1),PHAGE_Staphy_SA7_NC_048658(1),PHAGE_Lister_LP_101_NC_024387(1),PHAGE_Lactob_phiAT3_NC_005893(1),PHAGE_Oenoco_phiS11_NC_023571(1),PHAGE_Clostr_phiCP34O_NC_019508(1),PHAGE_Lactoc_BK5_T_NC_002796(1),PHAGE_Lactob_Nyseid_NC_047925(1),PHAGE_Staphy_YMC/09/04/R1988_NC_022758(1),PHAGE_Arthro_KBurrousTX_NC_049442(1),PHAGE_Lactob_JCL1032_NC_019456(1),PHAGE_Strept_phiARI0468_4_NC_031915(1),PHAGE_Bacill_BCJA1c_NC_006557(1),PHAGE_Bacill_SPP1_NC_004166(1),PHAGE_Clostr_phiCP13O_NC_019506(1),PHAGE_Klebsi_Sushi_NC_028774(1),PHAGE_Staphy_vB_SauS_phi2_NC_028862(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Erwini_Hena1_NC_048828(1),PHAGE_Strept_315.6_NC_004589(1),PHAGE_Lactob_LLKu_NC_022989(1),PHAGE_Strept_phi3396_NC_009018(1),PHAGE_Bacill_phIS3501_NC_019502(1),PHAGE_Lactob_Lc_Nu_NC_007501(1),PHAGE_Paenib_PBL1c_NC_048689(1),PHAGE_Ralsto_RSL1_NC_010811(1),PHAGE_Lactob_Maenad_NC_047931(1),PHAGE_Bacill_1_NC_009737(1),PHAGE_Lactob_Sha1_NC_019489(1),PHAGE_Staphy_phiRS7_NC_022914(1),PHAGE_Lactoc_Tuc2009_NC_002703(1),PHAGE_Geobac_E2_NC_009552(1),PHAGE_Strept_MM1_NC_003050(1),PHAGE_Microb_Pikmin_NC_042119(1),PHAGE_Clostr_phiCT19406C_NC_029006(1),PHAGE_Bacill_Gamma_NC_007458(1),PHAGE_Rhizob_16_3_NC_011103(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Lactoc_BM13_NC_021861(1),PHAGE_Lactoc_bIL310_NC_002669(1),PHAGE_Clostr_phiCD119_NC_007917(1),PHAGE_Lactob_Satyr_NC_047918(1),PHAGE_Lactob_Lrm1_NC_011104(1),PHAGE_Strept_PH10_NC_012756(1),PHAGE_Strept_315.5_NC_004588(1),PHAGE_Lactob_c5_NC_019449(1),PHAGE_Staphy_69_NC_007048(1),PHAGE_Staphy_2638A_NC_007051(1),PHAGE_Lactoc_KSY1_NC_009817(1),PHAGE_Bacill_BM5_NC_029069(1),PHAGE_Paenib_Tadhana_NC_048691(1),PHAGE_Entero_phiEap_3_NC_041980(1),PHAGE_Arthro_Sonali_NC_048152(1),PHAGE_Lactoc_bIL312_NC_002671(1),PHAGE_Bacill_WBeta_NC_007734(1),PHAGE_Lactoc_bIL311_NC_002670(1),PHAGE_Strept_315.3_NC_004586(1),PHAGE_Bacill_Page_NC_022764(1),PHAGE_Entero_vB_EfaS_AL2_NC_042127(1),PHAGE_Staphy_SA13_NC_021863(1),PHAGE_Eggert_PMBT5_NC_048022(1),PHAGE_Lactob_PLE3_NC_031125(1),PHAGE_Staphy_phinm2_NC_028913(1),PHAGE_Lactoc_50902_NC_049810(1),PHAGE_Clostr_phiCT453B_NC_029004(1),PHAGE_Lactoc_62503_NC_049811(1),PHAGE_Lactob_SA_C12_NC_047760(1),PHAGE_Lactob_T25_NC_048625(1),PHAGE_Strept_phiARI0131_1_NC_031901(1)   12                               12.61%                           35.66%                        
                                  3              43.6Kb                   intact(140)                   integrase,terminase,portal,capsid,head,tail,lysin     1078537-1122148          0                        53                      46                               5                                96.2%                            2                                yes                              28                               PHAGE_Entero_EFC_1_NC_025453(16),PHAGE_Bacill_BCJA1c_NC_006557(8),PHAGE_Paenib_Vegas_NC_028767(8),PHAGE_Entero_phiEf11_NC_013696(7),PHAGE_Entero_vB_IME197_NC_028671(7),PHAGE_Lactob_Lj928_NC_005354(7),PHAGE_Faecal_FP_Lugh_NC_047912(6),PHAGE_Entero_phiFL1A_NC_013646(5),PHAGE_Entero_phiFL4A_NC_013644(4),PHAGE_Entero_phiFL2A_NC_013643(4),PHAGE_Lactoc_ul36_NC_004066(4),PHAGE_Lactoc_Tuc2009_NC_002703(3),PHAGE_Entero_phiFL3A_NC_013648(3),PHAGE_Anoxyb_A403_NC_048701(3),PHAGE_Strept_SpSL1_NC_027396(3),PHAGE_Strept_phiARI0468_2_NC_031923(2),PHAGE_Lactob_Lb338_1_NC_012530(2),PHAGE_Strept_5093_NC_012753(2),PHAGE_Strept_P9_NC_009819(2),PHAGE_Strept_MM1_NC_003050(2),PHAGE_Strept_858_NC_010353(2),PHAGE_Strept_315.6_NC_004589(2),PHAGE_Lactoc_50101_NC_031040(2),PHAGE_Entero_EfaCPT1_NC_025465(2),PHAGE_Clostr_PhiS63_NC_017978(2),PHAGE_Lactoc_TP901_1_NC_002747(2),PHAGE_Lactoc_bIL285_NC_002666(2),PHAGE_Entero_IME_EF3_NC_023595(2),PHAGE_Strept_phiARI0746_NC_031907(2),PHAGE_Strept_phiBHN167_NC_022791(1),PHAGE_Bdello_phi1422_NC_019525(1),PHAGE_Strept_315.5_NC_004588(1),PHAGE_Lactoc_KSY1_NC_009817(1),PHAGE_Lister_LP_030_3_NC_024384(1),PHAGE_Staphy_2638A_NC_007051(1),PHAGE_Staphy_StB27_NC_019914(1),PHAGE_Staphy_IME_SA1_NC_047729(1),PHAGE_Lactoc_bIL312_NC_002671(1),PHAGE_Entero_vB_EfaS_AL2_NC_042127(1),PHAGE_Entero_EFLK1_NC_029026(1),PHAGE_Clostr_phi8074_B1_NC_019924(1),PHAGE_Staphy_vB_SepS_SEP9_NC_023582(1),PHAGE_Lister_A006_NC_009815(1),PHAGE_Staphy_TEM123_NC_017968(1),PHAGE_Strept_phiARI0131_1_NC_031901(1),PHAGE_Lactob_T25_NC_048625(1),PHAGE_Staphy_Ipla88_NC_011614(1),PHAGE_Bacill_phi4J1_NC_029008(1),PHAGE_Paenib_PBL1c_NC_048689(1),PHAGE_Brocho_NF5_NC_015252(1),PHAGE_Entero_phiEF24C_NC_009904(1),PHAGE_Arthro_Mufasa8_NC_049478(1),PHAGE_Lactob_phiJB_NC_022775(1),PHAGE_Strept_9873_NC_047763(1),PHAGE_Strept_PH15_NC_010945(1),PHAGE_Lactob_PL_1_NC_022757(1),PHAGE_Lactob_phig1e_NC_004305(1),PHAGE_Lactoc_BM13_NC_021861(1),PHAGE_Strept_SM1_NC_004996(1),PHAGE_Lactob_Lrm1_NC_011104(1),PHAGE_Strept_Sfi11_NC_002214(1),PHAGE_Entero_EF62phi_NC_017732(1),PHAGE_Lister_vB_LmoM_AG20_NC_020871(1),PHAGE_Lister_LP_101_NC_024387(1),PHAGE_Staphy_phiJB_NC_028669(1),PHAGE_Staphy_Sap26_NC_014460(1),PHAGE_Lactob_phiadh_NC_000896(1),PHAGE_Staphy_SA5_NC_047721(1),PHAGE_Staphy_88_NC_007063(1),PHAGE_Entero_EFAP_1_NC_012419(1),PHAGE_Bacter_Diva_NC_028788(1),PHAGE_Entero_vB_IME196_NC_028990(1),PHAGE_Lactoc_BK5_T_NC_002796(1),PHAGE_Staphy_SA12_NC_021801(1),PHAGE_Lister_B054_NC_009813(1),PHAGE_Leptos_LE1_NC_048892(1),PHAGE_Entero_PMBT2_NC_042101(1),PHAGE_Lactob_LfeSau_NC_029068(1),PHAGE_Bacill_SPP1_NC_004166(1),PHAGE_Strept_phiARI0468_4_NC_031915(1),PHAGE_Entero_ECP3_NC_027335(1),PHAGE_Strept_9871_NC_031069(1),PHAGE_Faecal_FP_Brigit_NC_047909(1),PHAGE_Strept_phi3396_NC_009018(1),PHAGE_Entero_IME_EF4_NC_023551(1),PHAGE_Aeriba_AP45_NC_048651(1),PHAGE_Entero_phiSHEF2_NC_042021(1),PHAGE_Staphy_53_NC_007049(1),PHAGE_Lactob_J_1_NC_022756(1),PHAGE_Strept_phiARI0462_NC_031942(1),PHAGE_Strept_9874_NC_031023(1),PHAGE_Lactob_A2_NC_004112(1),PHAGE_Strept_O1205_NC_004303(1),PHAGE_Bacill_Waukesha92_NC_025424(1),PHAGE_Lactob_LJ_NC_048680(1),PHAGE_Staphy_phiETA2_NC_008798(1),PHAGE_Lister_A500_NC_009810(1),PHAGE_Lactoc_Q33_NC_049809(1),PHAGE_Lactoc_bIL309_NC_002668(1),PHAGE_Staphy_96_NC_007057(1),PHAGE_Paenib_Shelly_NC_041909(1),PHAGE_Strept_2972_NC_007019(1),PHAGE_Strept_TP_J34_NC_020197(1),PHAGE_Staphy_6ec_NC_024355(1),PHAGE_Entero_vB_EfaS_AL3_NC_042126(1),PHAGE_Entero_SANTOR1_NC_031051(1),PHAGE_Lactob_LL_H_NC_009554(1),PHAGE_Strept_T12_NC_028700(1)   16                               30.18%                           35.76%                        
                                  4              14.6Kb                   incomplete(40)                capsid,tail                                  1292299-1306923          0                        16                      15                               1                                100%                             0                                no                               10                               PHAGE_Entero_vB_IME197_NC_028671(7),PHAGE_Entero_phiEf11_NC_013696(5),PHAGE_Entero_EFC_1_NC_025453(4),PHAGE_Strept_TP_J34_NC_020197(2),PHAGE_Strept_Sfi11_NC_002214(2),PHAGE_Entero_EF62phi_NC_017732(2),PHAGE_Strept_Alq132_NC_013598(2),PHAGE_Bacill_WBeta_NC_007734(2),PHAGE_Lactob_LfeSau_NC_029068(2),PHAGE_Lactob_PLE3_NC_031125(2),PHAGE_Strept_O1205_NC_004303(1),PHAGE_Strept_20617_NC_023503(1),PHAGE_Thermu_OH2_NC_021784(1),PHAGE_Lactob_Sha1_NC_019489(1),PHAGE_Staphy_phiBU01_NC_026016(1),PHAGE_Lactob_iA2_NC_028830(1),PHAGE_Lactoc_Tuc2009_NC_002703(1),PHAGE_Strept_Dp_1_NC_015274(1),PHAGE_Lactoc_TP901_1_NC_002747(1),PHAGE_Paenib_Tripp_NC_028930(1),PHAGE_Bacill_Gamma_NC_007458(1),PHAGE_Strept_M102_NC_012884(1),PHAGE_Propio_Anatole_NC_041890(1),PHAGE_Bacill_Mgbh1_NC_041879(1),PHAGE_Entero_phiFL3A_NC_013648(1),PHAGE_Entero_SANTOR1_NC_031051(1),PHAGE_Lactob_phiAQ113_NC_019782(1),PHAGE_Staphy_SA780ruMSSAST101_NC_048711(1),PHAGE_Staphy_P1105_NC_048636(1),PHAGE_Staphy_JS01_NC_021773(1),PHAGE_Clostr_phiCT19406A_NC_030950(1),PHAGE_Propio_B3_NC_041892(1),PHAGE_Strept_APCM01_NC_029030(1),PHAGE_Strept_M102AD_NC_028984(1),PHAGE_Anoxyb_A403_NC_048701(1),PHAGE_Entero_Ec_ZZ2_NC_031260(1),PHAGE_Strept_858_NC_010353(1),PHAGE_Strept_TP_778L_NC_022776(1),PHAGE_Clostr_phiCT453A_NC_028991(1),PHAGE_Bacill_Page_NC_022764(1),PHAGE_Entero_vB_EfaS_AL2_NC_042127(1),PHAGE_Lactob_JCL1032_NC_019456(1),PHAGE_Staphy_phiSa119_NC_025460(1),PHAGE_Lactoc_PLgT_1_NC_031016(1),PHAGE_Lactob_PLE2_NC_031036(1),PHAGE_Bacill_vB_BceS_MY192_NC_048633(1),PHAGE_Lactob_Lb_NC_047983(1)   6                                43.75%                           38.68%                        
                                  5              70.1Kb                   incomplete(50)                integrase,head                               1460884-1531000          2                        77                      59                               13                               93.5%                            5                                yes                              24                               PHAGE_Lister_B054_NC_009813(29),PHAGE_Lactob_LBR48_NC_027990(19),PHAGE_Aeriba_AP45_NC_048651(17),PHAGE_Deep_s_D6E_NC_019544(8),PHAGE_Entero_phiFL3A_NC_013648(7),PHAGE_Entero_phiEf11_NC_013696(7),PHAGE_Entero_phiFL2A_NC_013643(6),PHAGE_Lactob_Lb_NC_047983(5),PHAGE_Entero_EFC_1_NC_025453(5),PHAGE_Entero_phiFL1A_NC_013646(4),PHAGE_Entero_vB_IME197_NC_028671(4),PHAGE_Lister_B025_NC_009812(3),PHAGE_Lactob_PLE3_NC_031125(3),PHAGE_Brevib_Jimmer2_NC_041976(2),PHAGE_Entero_phiEF24C_NC_009904(2),PHAGE_Bacill_Pavlov_NC_028782(2),PHAGE_Bacill_Palmer_NC_028926(2),PHAGE_Lactoc_98201_NC_031064(2),PHAGE_Rhizob_RHEph04_NC_041908(2),PHAGE_Strept_EJ_1_NC_005294(2),PHAGE_Entero_EFLK1_NC_029026(2),PHAGE_Strept_TP_J34_NC_020197(2),PHAGE_Lister_A500_NC_009810(2),PHAGE_Strept_O1205_NC_004303(2),PHAGE_Lactob_iLp84_NC_028783(2),PHAGE_Erwini_phiEt88_NC_015295(2),PHAGE_Lactoc_28201_NC_031013(2),PHAGE_Bacill_Pookie_NC_027394(2),PHAGE_Lister_LP_HM00113468_NC_049900(2),PHAGE_Entero_EF62phi_NC_017732(2),PHAGE_Bacill_vB_BtS_B83_NC_048762(2),PHAGE_Bacill_Grass_NC_022771(2),PHAGE_Faecal_FP_Brigit_NC_047909(2),PHAGE_Entero_ECP3_NC_027335(2),PHAGE_Bacill_vB_BsuM_Goe3_NC_048652(1),PHAGE_Staphy_phiRS7_NC_022914(1),PHAGE_Bacill_1_NC_009737(1),PHAGE_Lister_LP_030_2_NC_021539(1),PHAGE_Faecal_FP_Epona_NC_047910(1),PHAGE_Lactob_LP65_NC_006565(1),PHAGE_Lister_2389_NC_003291(1),PHAGE_Lactob_P1_NC_047764(1),PHAGE_Staphy_CNPx_NC_031241(1),PHAGE_Strept_315.1_NC_004584(1),PHAGE_Lactoc_r1t_NC_004302(1),PHAGE_Bacill_Moonbeam_NC_027374(1),PHAGE_Brevib_Osiris_NC_028969(1),PHAGE_Brevib_Jimmer1_NC_029104(1),PHAGE_Staphy_StB27_NC_019914(1),PHAGE_Bacill_IEBH_NC_011167(1),PHAGE_Lister_LP_030_3_NC_024384(1),PHAGE_Staphy_2638A_NC_007051(1),PHAGE_Bacill_G_NC_023719(1),PHAGE_Erwini_pEp_SNUABM_01_NC_048807(1),PHAGE_Strept_phiBHN167_NC_022791(1),PHAGE_Strept_PH10_NC_012756(1),PHAGE_Entero_phiFL4A_NC_013644(1),PHAGE_Lactoc_lato_NC_004746(1),PHAGE_Lactob_BH1_NC_048737(1),PHAGE_Entero_phi92_NC_023693(1),PHAGE_Lactob_T25_NC_048625(1),PHAGE_Klebsi_JD001_NC_020204(1),PHAGE_Brevib_Davies_NC_022980(1),PHAGE_Lactob_8014_B2_NC_047739(1),PHAGE_Bacill_Page_NC_022764(1),PHAGE_Bacill_BSP38_NC_048726(1),PHAGE_Bacill_BalMu_1_NC_030945(1),PHAGE_Strept_phiNJ2_NC_019418(1),PHAGE_Lactob_LF1_NC_019486(1),PHAGE_Staphy_CNPH82_NC_008722(1),PHAGE_Clostr_phiMMP02_NC_019421(1),PHAGE_Strept_315.2_NC_004585(1),PHAGE_Lactoc_50101_NC_031040(1),PHAGE_Lactob_LJ_NC_048680(1),PHAGE_Bacill_Waukesha92_NC_025424(1),PHAGE_Bacill_phi4B1_NC_028886(1),PHAGE_Entero_vB_EfaS_AL3_NC_042126(1),PHAGE_Entero_SANTOR1_NC_031051(1),PHAGE_Geobac_GBSV1_NC_008376(1),PHAGE_Salmon_SEN34_NC_028699(1),PHAGE_Synech_S_CBS4_NC_016766(1),PHAGE_Lactob_Lpa804_NC_048134(1),PHAGE_Vibrio_vB_VchM_138_NC_019518(1),PHAGE_Psychr_pOW20_A_NC_020841(1),PHAGE_Staphy_StauST398_5_NC_023500(1),PHAGE_Bacill_phiAGATE_NC_020081(1),PHAGE_Entero_Ec_ZZ2_NC_031260(1),PHAGE_Rhizob_RHEph06_NC_027296(1),PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640(1),PHAGE_Bacill_SIOphi_NC_042133(1),PHAGE_Citrob_Sazh_NC_048065(1),PHAGE_Bacill_Pony_NC_022770(1),PHAGE_Salmon_phSE_2_NC_031026(1),PHAGE_Brevib_Abouo_NC_029029(1),PHAGE_Entero_IME_EF4_NC_023551(1),PHAGE_Staphy_vB_SpsS_QT1_NC_048192(1),PHAGE_Edward_PEi21_NC_021342(1),PHAGE_Lister_A118_NC_003216(1),PHAGE_Staphy_13_NC_004617(1),PHAGE_Bacill_BCJA1c_NC_006557(1),PHAGE_Bacill_phiNIT1_NC_021856(1),PHAGE_Strept_phiARI0468_4_NC_031915(1),PHAGE_Acinet_YMC13/03/R2096_NC_027332(1),PHAGE_Lactob_Lj771_NC_010179(1),PHAGE_Paenib_PG1_NC_021558(1)   29                               37.66%                           35.73%                        
                                  6              46.4Kb                   intact(150)                   portal,lysin,tail,head,capsid,terminase,recombinase     1963738-2010160          1                        47                      36                               9                                95.7%                            2                                yes                              23                               PHAGE_Entero_phiFL1A_NC_013646(10),PHAGE_Entero_phiFL3A_NC_013648(10),PHAGE_Entero_phiEf11_NC_013696(8),PHAGE_Entero_phiFL2A_NC_013643(7),PHAGE_Entero_vB_IME197_NC_028671(6),PHAGE_Lactob_Lj928_NC_005354(6),PHAGE_Entero_EFC_1_NC_025453(4),PHAGE_Lactob_CL1_NC_028888(3),PHAGE_Lactoc_ul36_NC_004066(3),PHAGE_Anoxyb_A403_NC_048701(3),PHAGE_Strept_5093_NC_012753(3),PHAGE_Strept_P9_NC_009819(3),PHAGE_Lactoc_Tuc2009_NC_002703(3),PHAGE_Strept_phiARI0462_NC_031942(2),PHAGE_Lactob_LJ_NC_048680(2),PHAGE_Entero_EfaCPT1_NC_025465(2),PHAGE_Lactoc_TP901_1_NC_002747(2),PHAGE_Staphy_Ipla7_NC_018284(2),PHAGE_Bacill_phi4B1_NC_028886(2),PHAGE_Strept_315.6_NC_004589(2),PHAGE_Entero_phiSHEF2_NC_042021(2),PHAGE_Lactob_J_1_NC_022756(2),PHAGE_Lactob_iLp1308_NC_028911(2),PHAGE_Lactob_PL_1_NC_022757(2),PHAGE_Strept_9874_NC_031023(1),PHAGE_Strept_O1205_NC_004303(1),PHAGE_Lactob_iA2_NC_028830(1),PHAGE_Staphy_phiETA2_NC_008798(1),PHAGE_Thermu_OH2_NC_021784(1),PHAGE_Aeromo_4_4572_NC_048773(1),PHAGE_Strept_TP_J34_NC_020197(1),PHAGE_Strept_315.2_NC_004585(1),PHAGE_Entero_IME_EFm5_NC_028826(1),PHAGE_Geobac_GBSV1_NC_008376(1),PHAGE_Lactob_LL_H_NC_009554(1),PHAGE_Entero_IME_EF3_NC_023595(1),PHAGE_Staphy_Slt_NC_002661(1),PHAGE_Strept_T12_NC_028700(1),PHAGE_Acinet_vB_AbaM_ME3_NC_041884(1),PHAGE_Entero_EFDG1_NC_029009(1),PHAGE_Strept_Sfi11_NC_002214(1),PHAGE_Lactob_phiadh_NC_000896(1),PHAGE_Entero_EFAP_1_NC_012419(1),PHAGE_Staphy_phi7247PVL_NC_048624(1),PHAGE_Staphy_SA12_NC_021801(1),PHAGE_Entero_VD13_NC_024212(1),PHAGE_Entero_PMBT2_NC_042101(1),PHAGE_Staphy_Ipla5_NC_018281(1),PHAGE_Lactob_LfeSau_NC_029068(1),PHAGE_Vibrio_VBP47_NC_020848(1),PHAGE_Lactob_PLE2_NC_031036(1),PHAGE_Staphy_StB20_NC_019915(1),PHAGE_Strept_phi3396_NC_009018(1),PHAGE_Strept_SPQS1_NC_021868(1),PHAGE_Strept_BillNye_NC_042105(1),PHAGE_Bacill_1_NC_009737(1),PHAGE_Entero_EFP01_NC_047796(1),PHAGE_Lactob_Sha1_NC_019489(1),PHAGE_Erysip_SE_1_NC_029078(1),PHAGE_Lactob_Maenad_NC_047931(1),PHAGE_Brocho_NF5_NC_015252(1),PHAGE_Staphy_phiRS7_NC_022914(1),PHAGE_Clostr_phiCD211_NC_029048(1),PHAGE_Brevib_Jimmer2_NC_041976(1),PHAGE_Vibrio_VBP32_NC_020868(1),PHAGE_Lactob_phiJB_NC_022775(1),PHAGE_Strept_9873_NC_047763(1),PHAGE_Brevib_Jimmer1_NC_029104(1),PHAGE_Strept_315.1_NC_004584(1),PHAGE_Brevib_Osiris_NC_028969(1),PHAGE_Lactob_Lrm1_NC_011104(1),PHAGE_Strept_SM1_NC_004996(1),PHAGE_Lactob_phiAQ113_NC_019782(1),PHAGE_Strept_315.5_NC_004588(1),PHAGE_Entero_VD13_NC_041861(1),PHAGE_Entero_phiFL4A_NC_013644(1),PHAGE_Lister_LP_030_3_NC_024384(1),PHAGE_Staphy_StB12_NC_020490(1),PHAGE_Strept_phiARI0460_1_NC_031913(1),PHAGE_Lactoc_bIL312_NC_002671(1),PHAGE_Entero_EfV12_phi1_NC_048087(1),PHAGE_Staphy_SA13_NC_021863(1),PHAGE_Clostr_phi8074_B1_NC_019924(1),PHAGE_Lactob_CL2_NC_028835(1),PHAGE_Strept_phiARI0923_NC_030946(1),PHAGE_Vibrio_1.026.O._10N.222.49.C7_NC_049430(1),PHAGE_Vibrio_1.097.O._10N.286.49.B3_NC_049431(1),PHAGE_Oenoco_phi9805_NC_023559(1),PHAGE_Strept_SMP_NC_008721(1)   10                               21.27%                           34.99%                        
                                  7              55.4Kb                   intact(150)                   lysin,capsid,tail,portal,terminase,head,integrase     2106823-2162247          1                        59                      52                               7                                100%                             0                                yes                              12                               PHAGE_Entero_vB_IME197_NC_028671(38),PHAGE_Entero_phiEf11_NC_013696(35),PHAGE_Entero_EFC_1_NC_025453(25),PHAGE_Brocho_NF5_NC_015252(6),PHAGE_Lister_B054_NC_009813(6),PHAGE_Entero_phiFL3A_NC_013648(5),PHAGE_Lactoc_TP901_1_NC_002747(4),PHAGE_Strept_315.3_NC_004586(4),PHAGE_Strept_SM1_NC_004996(3),PHAGE_Lactoc_ul36_NC_004066(3),PHAGE_Lactoc_Tuc2009_NC_002703(3),PHAGE_Entero_phiFL1A_NC_013646(3),PHAGE_Staphy_phinm2_NC_028913(3),PHAGE_Lactob_iLp1308_NC_028911(2),PHAGE_Brocho_BL3_NC_015254(2),PHAGE_Erysip_SE_1_NC_029078(2),PHAGE_Lactob_Lb_NC_047983(2),PHAGE_Entero_EF62phi_NC_017732(2),PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640(2),PHAGE_Staphy_SA12_NC_021801(2),PHAGE_Entero_phiFL2A_NC_013643(2),PHAGE_Strept_EJ_1_NC_005294(1),PHAGE_Entero_IME_EFm5_NC_028826(1),PHAGE_Arthro_Shade_NC_042015(1),PHAGE_Lactob_PL_1_NC_022757(1),PHAGE_Strept_9873_NC_047763(1),PHAGE_Gordon_GTE6_NC_028665(1),PHAGE_Bacill_vB_BhaS_171_NC_030904(1),PHAGE_Lactob_Lpa804_NC_048134(1),PHAGE_Arthro_Sonny_NC_041933(1),PHAGE_Entero_EFDG1_NC_029009(1),PHAGE_Strept_T12_NC_028700(1),PHAGE_Staphy_CNPx_NC_031241(1),PHAGE_Lactob_P1_NC_047764(1),PHAGE_Lactob_iLp84_NC_028783(1),PHAGE_Strept_phiARI0746_NC_031907(1),PHAGE_Entero_vB_EfaP_Efmus4_NC_049935(1),PHAGE_Strept_315.4_NC_004587(1),PHAGE_Strept_DCC1738_NC_024361(1),PHAGE_Staphy_187_NC_007047(1),PHAGE_Lactob_LL_H_NC_009554(1),PHAGE_Lactob_phig1e_NC_004305(1),PHAGE_Oenoco_phiS13_NC_023560(1),PHAGE_Entero_vB_EfaP_Ef7.4_NC_049940(1),PHAGE_Strept_20617_NC_023503(1),PHAGE_Lister_A500_NC_009810(1),PHAGE_Lactob_Sha1_NC_019489(1),PHAGE_Entero_EFP01_NC_047796(1),PHAGE_Staphy_55_NC_007060(1),PHAGE_Staphy_AJ_2017_NC_048644(1),PHAGE_Staphy_tp310_3_NC_009763(1),PHAGE_Temper_phiNIH1.1_NC_003157(1),PHAGE_Staphy_Ipla88_NC_011614(1),PHAGE_Lactob_LP65_NC_006565(1),PHAGE_Strept_9874_NC_031023(1),PHAGE_Lactob_CL1_NC_028888(1),PHAGE_Strept_TP_J34_NC_020197(1),PHAGE_Paenib_Vegas_NC_028767(1),PHAGE_Entero_phiEF24C_NC_009904(1),PHAGE_Staphy_SPbeta_like_NC_029119(1),PHAGE_Staphy_CNPH82_NC_008722(1),PHAGE_Arthro_Martha_NC_041932(1),PHAGE_Staphy_IME_SA4_NC_029025(1),PHAGE_Lactob_8014_B2_NC_047739(1),PHAGE_Entero_IME_EFm1_NC_024356(1),PHAGE_Staphy_TEM123_NC_017968(1),PHAGE_Bacill_BCJA1c_NC_006557(1),PHAGE_Lactob_PLE3_NC_031125(1),PHAGE_Entero_EFLK1_NC_029026(1),PHAGE_Strept_A25_NC_028697(1),PHAGE_Staphy_SA13_NC_021863(1),PHAGE_Microb_Min1_NC_009603(1),PHAGE_Lactob_T25_NC_048625(1),PHAGE_Lactob_Bromius_NC_048085(1),PHAGE_Staphy_vB_SpsS_QT1_NC_048192(1),PHAGE_Staphy_77_NC_005356(1),PHAGE_Staphy_vB_SauS_phi2_NC_028862(1),PHAGE_Staphy_85_NC_007050(1),PHAGE_Staphy_Sap26_NC_014460(1),PHAGE_Lister_LP_101_NC_024387(1),PHAGE_Anoxyb_A403_NC_048701(1),PHAGE_Bacill_PM1_NC_020883(1),PHAGE_Arthro_Zartrosa_NC_049468(1),PHAGE_Staphy_SA97_NC_029010(1),PHAGE_Bacill_vB_BtS_B83_NC_048762(1),PHAGE_Lactob_Iacchus_NC_048084(1),PHAGE_Lactoc_bIL312_NC_002671(1),PHAGE_Entero_EfV12_phi1_NC_048087(1),PHAGE_Strept_TP_778L_NC_022776(1),PHAGE_Staphy_phiSA_BS2_NC_047948(1),PHAGE_Oenoco_phiS11_NC_023571(1),PHAGE_Staphy_tp310_1_NC_009761(1)   36                               64.4%                            34.53%                        
                                  8              54Kb                     intact(140)                   lysin,tail,head,integrase                    2645150-2699222          2                        54                      43                               8                                94.4%                            3                                yes                              23                               PHAGE_Bacill_phBC6A52_NC_004821(11),PHAGE_Lactob_PLE2_NC_031036(9),PHAGE_Lactob_iA2_NC_028830(7),PHAGE_Entero_phiFL1A_NC_013646(7),PHAGE_Entero_phiFL2A_NC_013643(7),PHAGE_Entero_phiEf11_NC_013696(5),PHAGE_Entero_vB_IME197_NC_028671(5),PHAGE_Lister_B054_NC_009813(4),PHAGE_Entero_phiFL3A_NC_013648(3),PHAGE_Entero_phiFL4A_NC_013644(3),PHAGE_Lactob_LF1_NC_019486(2),PHAGE_Strept_phiARI0468_4_NC_031915(2),PHAGE_Strept_9871_NC_031069(2),PHAGE_Brocho_NF5_NC_015252(2),PHAGE_Strept_9873_NC_047763(2),PHAGE_Strept_EJ_1_NC_005294(2),PHAGE_Strept_315.1_NC_004584(2),PHAGE_Strept_9872_NC_031094(2),PHAGE_Clostr_phi3626_NC_003524(2),PHAGE_Lister_B025_NC_009812(2),PHAGE_Lactob_BH1_NC_048737(2),PHAGE_Lactob_LJ_NC_048680(1),PHAGE_Clostr_phiSM101_NC_008265(1),PHAGE_Lactoc_50101_NC_031040(1),PHAGE_Thermu_OH2_NC_021784(1),PHAGE_Lactoc_bIL309_NC_002668(1),PHAGE_Temper_phiNIH1.1_NC_003157(1),PHAGE_Staphy_AJ_2017_NC_048644(1),PHAGE_Lactoc_TP901_1_NC_002747(1),PHAGE_Burkho_phi6442_NC_009235(1),PHAGE_Lactob_Lenus_NC_047897(1),PHAGE_Strept_phiNJ2_NC_019418(1),PHAGE_Staphy_IME_SA4_NC_029025(1),PHAGE_Strept_TP_J34_NC_020197(1),PHAGE_Strept_315.2_NC_004585(1),PHAGE_Lactoc_bIL285_NC_002666(1),PHAGE_Staphy_42E_NC_007052(1),PHAGE_Staphy_Slt_NC_002661(1),PHAGE_Weisse_phiYS61_NC_018270(1),PHAGE_Entero_vB_EfaS_AL3_NC_042126(1),PHAGE_Strept_315.4_NC_004587(1),PHAGE_Brocho_BL3_NC_015254(1),PHAGE_Lactoc_ul36_NC_004066(1),PHAGE_Staphy_187_NC_007047(1),PHAGE_Lactob_phiAT3_NC_005893(1),PHAGE_Entero_EF62phi_NC_017732(1),PHAGE_Bacill_PM1_NC_020883(1),PHAGE_Lactob_Nyseid_NC_047925(1),PHAGE_Staphy_YMC/09/04/R1988_NC_022758(1),PHAGE_Clostr_phiCP34O_NC_019508(1),PHAGE_Bacill_BCJA1c_NC_006557(1),PHAGE_Staphy_SA345ruMSSAST8_NC_048713(1),PHAGE_Lactob_JCL1032_NC_019456(1),PHAGE_Aeriba_AP45_NC_048651(1),PHAGE_Erwini_Hena1_NC_048828(1),PHAGE_Strept_315.6_NC_004589(1),PHAGE_Klebsi_Sushi_NC_028774(1),PHAGE_Staphy_vB_SauS_phi2_NC_028862(1),PHAGE_Klebsi_phiKO2_NC_005857(1),PHAGE_Clostr_phiCP13O_NC_019506(1),PHAGE_Lactoc_PLgT_1_NC_031016(1),PHAGE_Erysip_SE_1_NC_029078(1),PHAGE_Bacill_1_NC_009737(1),PHAGE_Lactob_Sha1_NC_019489(1),PHAGE_Ralsto_RSL1_NC_010811(1),PHAGE_Lactob_Maenad_NC_047931(1),PHAGE_Strept_5093_NC_012753(1),PHAGE_Bacill_phIS3501_NC_019502(1),PHAGE_Lactob_Lc_Nu_NC_007501(1),PHAGE_Lactob_Ld25A_NC_025415(1),PHAGE_Lactoc_Tuc2009_NC_002703(1),PHAGE_Rhizob_16_3_NC_011103(1),PHAGE_Burkho_phiE125_NC_003309(1),PHAGE_Clostr_phiCT19406C_NC_029006(1),PHAGE_Bacill_Gamma_NC_007458(1),PHAGE_Lactob_Lrm1_NC_011104(1),PHAGE_Lactob_Satyr_NC_047918(1),PHAGE_Clostr_phiCD119_NC_007917(1),PHAGE_Lactoc_bIL310_NC_002669(1),PHAGE_Lactoc_KSY1_NC_009817(1),PHAGE_Strept_315.5_NC_004588(1),PHAGE_Strept_phiBHN167_NC_022791(1),PHAGE_Lactoc_lato_NC_004746(1),PHAGE_Strept_PH10_NC_012756(1),PHAGE_Bacill_WBeta_NC_007734(1),PHAGE_Lactoc_bIL311_NC_002670(1),PHAGE_Bacill_BM5_NC_029069(1),PHAGE_Bacill_Page_NC_022764(1),PHAGE_Entero_vB_EfaS_AL2_NC_042127(1),PHAGE_Strept_315.3_NC_004586(1),PHAGE_Lactob_SA_C12_NC_047760(1),PHAGE_Clostr_phiCT453B_NC_029004(1)   11                               20.37%                           35.40%                        
