gi|00000000|ref|CP093134.1|  Salmonella enterica subsp. enterica serovar Reading strain 4543956, gc%: 52.19%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
947378..948301                     PHAGE_Escher_RCS47_NC_042128: hypothetical protein; BD984_04545; phage(gi100020)     2.97e-143           SalmonellaentericasubspentericaserovarReadingMTTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFASVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAVDIFVKDLGLVADTAKALRFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGITLPGVTPEEPSC
948295..949557                     PHAGE_Escher_RCS47_NC_042128: hypothetical protein; BD984_04550; phage(gi100019)     1.43e-168           SalmonellaentericasubspentericaserovarReadingMLKIGVIADDFTGATDIASFLVENGMPTVQINDVPTGTQPEGCDAVVISLKTRSCPAQEAIKQSLAALVWLKKQGCQQVYFKYCSTFDSTAEGNIGPVTDALMVALDTSFTVISPALPVNGRTVYQGYLFVMNHLLAESGMRHHPINPMTDSYLPRLMEAQAQGRCGVIPAQMLDEGVAATRAALSRLQQEGYRYAVLDALNERHLEIQGEVLRDAPLVTGGSGLAMGLARQWAKRGASQARSAGYPLSGRAVVLSGSCSQMTNQQVAFYRQHAPTRDVDVARCLSSETREAYAEALAQWVLSQDSELAPMISATASTQALAAIQQQYGATEASHAVEALFSLLAARLAEGGITRFIVAGGETSGVVTQSLGITGFHIGPCISPGVPWVNALHAPVSLALKSGNFGDESFFIRAQREFQV
949554..950192                     PHAGE_Escher_RCS47_NC_042128: hypothetical protein; BD984_04555; phage(gi100018)     2.66e-111           SalmonellaentericasubspentericaserovarReadingMTTLAKEEHALREEMVRIAASFFQRGYATGSAGNLSLLLPDGNILATPTGSCLGNLDPQRLSKVDPQGEWLSGDKPSKEVRFHLALYRNNPCCKAVVHLHSTWSTALSCLEGLDPQNVIRPFTPYVVMRMGDIPLVPYYRPGDDRIARDLAALAARHQAFLLANHGPVVCGENLQEAANNTEELEETAKLIFILGERPIRYLTTEEIAQLRR
950197..950973                     HPr family phosphocarrier protein; BD984_04560                                       N/A                 SalmonellaentericasubspentericaserovarReadingMPRFAANLSMMFTEVPFIERFAAAAEAGFQAVEFLFPYDFAASEIKAQLSRHDLTLALFNTSAGDTAAGEWGRAALPGREHDARADIDLALEYALALECEQVHIMAGVVPDGADGARYRATFIDNLRYAADRFAAHDKRILIEALSPGVKPGYLFSSQYQALGIAEEVNRPNVFIQLDTFHAQKVDGNLSHLIREYAGRYAHVQIASLPDRHEPDDGEINYPWLFRLFDDVGYRGWIGCEYQPRNTTQDGLGWFNAWR
951013..951963                     PHAGE_Escher_ESCO13_NC_047770: hypothetical protein; BD984_04565; phage(gi100088)     5.62e-07            SalmonellaentericasubspentericaserovarReadingMQIIITGGGGFLGQKLASALLNSSLAFNELLLVDLKMPARLSDSPRLRCLEADLTQPGVLENVITANTSVVYHLAAIVSSHAEDDFDLGWKVNLDLTRQLLEACRRQPQKIRFVFSSSLAVYGGTLPECVTDTTALTPRSSYGAQKAACELLVNDYTRKGYVDGLALRLPTICVRPGKPNRAASSFVSAIIREPLQGETTICPVSESLRLWISSPATVIHNLSLAATLPAPGEASSINLPGISVTVGEMLETLRQAGGQAARDRVTHQRDEGVEKIVASWPGRIDNQRALALGFVADKRFDDIIERFRQDDMEGRS
951960..953456                     GntP family permease; BD984_04570                                                    N/A                 SalmonellaentericasubspentericaserovarReadingMTSLPTPIIGLIVAVFVLVWLVLRTRVHALIAMLAAACIAGLLGGMGIDKTLSVITSGFGTTLGSIGLVIGLGVMMGRLLEVSGAAERIAWSFIKWLGKRREEWALAITGYIVSIPIFVDSAFVILYPVAKALAKSGKRSLLTLGVALAGGLVVTHHTVPPTPGPLGVAGIFNVDIGAMLLTGMALAVPCVIGIVFYAQWLDKRYPDFVPRTLNADEVNAALEQYNKEKEQKDLPSLTLSLLPIVVPIVLIFLKAICSTLATVEGWSGLATHPVVQAINFVGSPVIALAISVLLAVYTLVPRMDKHTTAERLEEGLQSAGIILLVTGAGGALGAILRDSGAGQQLAEQVANLPISPILIPFIVATLVRLIQGSGTVAMITAASISAPILAQIPGINMLLAAQAATMGSLFFGYFNDSLFWVVNRMMGVSDVKQQMVVWSVPTTIAWAIGGTGVALINLLFGSGGSWLDPLLPIVVLAAIMLWVRWQAQGIKDKLVVKD
complement(953498..954430)         PHAGE_Klebsi_ST437_OXA245phi4.1_NC_049448: tail assembly protein; BD984_04575; phage(gi100053)     1.68e-30            SalmonellaentericasubspentericaserovarReadingMTVKELAMLNLQRMSLFIAVVDSGSFTAAAAASGQTKAVVSFNIRQLEKELGVTLLLRSTRRLTLTDAGVLFYQKGVNLLNAAKNLQDEVRASHSGLGGELRITTTPEFGEQVVIPVLAQFSQRHPDLRIRHMSSSHHADLIAERFDVAIRLGSLADSRYRAALISRFTILPVAAPQWLARHPVSSLESLAQAEWIIHERLPTPLRWTVTNNHGQHSRLEISKAGKISVDSARSLMAFALAGSGVALLPQWLVNTALEDGTLIHVLPDYHFPRQGIYAVYPDARHVSTKVRAFIDFLRSQWDCGEHAPSS
954518..955726                     PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; BD984_04580; phage(gi971757643)     9.28e-05            SalmonellaentericasubspentericaserovarReadingMTYRSKVAVVYLLGFFLDLINLFIASVAFPAMSVDLHTSISALAWVSNGYIAGLTLIIPFSAFLSRYLGARRLIIFSLILFSVAAAAAGFADSLHSLVFWRIVQGAGGGLLIPVGQALTWQQFKPHERAGVSSVVMMVALLAPACSPAIGGLLVETCGWRWIFFATLPVAVLTLLLAYCWLNVASTTMASARLLHLPLLTDRLLRFAMIVYLCVPGMFIGISVVGMFYLQNVAQLSPAAAGSLMLPWSIASFVAIMFTARYFNRLGPRPLIIVGCLLQAAGILLLTNVTPATSHRVLMMIFALMGAGGSLCSSTAQSGAFLTIARRDMPDASALWNLNRQLSFFLGATLLTLLLNALQRVMSLEVAYRWTFIAAAGITLLPLIYAVCLNNRQALLCLKKERP
955723..956103                     DUF4440 domain-containing protein; BD984_04585                                       N/A                 SalmonellaentericasubspentericaserovarReadingMNPYKDEIIHAHAAIESWLSKGMGSLEALIARFAADFTMITPGGVCLDYPALGAFFQAQRACRPGLVIVVEHIDLVAEWPEGAALRYRERQQLPGQAETVRWSTVILKRERRRIVWRHLHETTVTA
complement(956159..958726)         PHAGE_Bacter_B124_14_NC_016770: putative mismatch repair protein; BD984_04590; phage(gi374671664)     9.63e-13            SalmonellaentericasubspentericaserovarReadingMNESFDKDFSNHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASKLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENASRGLCAAGCLLQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGVENTLAAVLDCTVTPMGSRMLKRWLHMPVRNTDILRERQQTIGALQDTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELHAQLETVDSAPVQALRKKMGDFAELRDLLERAIIDAPPVLVRDGGVIAPGYHEELDEWRALADGATDYLDRLEIRERERTGLDTLKVGYNAVHGYYIQISRGQSHLAPINYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSANALAELDVLVNLAERAWTLNYTCPTFTDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV
958885..959306                     cytoplasmic protein; BD984_04595                                                     N/A                 SalmonellaentericasubspentericaserovarReadingLKTTLSQPFIINKLSINVKSALSRSGKIVFEANPAQKLYIVFDDHREAPAGFGVKASLTKKTYVIQRRVASSDRNVSEGRKPSSVLKVKVGNVFDFPSIDETRQVARQLVQTMLATKRNPNKIKRGADASELKMRLLKLTG
959410..959532                     cytoplasmic protein; BD984_04600                                                     N/A                 SalmonellaentericasubspentericaserovarReadingTAIKIVLHEGKPIHFTTTVIALSSDRYLELCDLYSSQAIE
complement(959703..960359)         PHAGE_Escher_RCS47_NC_042128: putative DNA polymerase; BD984_04605; phage(gi100100)     8.38e-61            SalmonellaentericasubspentericaserovarReadingMELIRYADINSDLYRHIWVVGDIHGRYSLLLTRLAQLNFSPDTDLLISTGDNIDRGKENLETLRLLNTSWFISVVGNHEAMALDAFETQDGNFWYVNGGYWYDSVTEKDRQEATELLLTFKQRPHIIEVETSSKKYVIAHADYPDDSYDYGKQVDIDSVLWSRDRLLGSLQGNIHPIRGADTFIFGHMIVDYTTTFANQIYIDTGSFCSGNLSFFKIK
960583..961013                     PHAGE_Salmon_SJ46_NC_031129: hypothetical protein; BD984_04610; phage(gi100065)      8.59e-31            SalmonellaentericasubspentericaserovarReadingSLSGTTDTQALPGLISQTHCKIREASADGAYDTRYCHDVLLRKKIRPLIPPRSGARYWPDKYHERNHAVANQHRSGSNEVWKRKWAITVVQWKQRCFVLKPCWAAIVCGTMTRRVKRWRCSRRTGRCWQCRPASGSYAA
complement(961086..961178)         GNAT family N-acetyltransferase; BD984_04615                                         N/A                 SalmonellaentericasubspentericaserovarReadingFGAVSLNDQPLSLLLSFKTLYATLSASGRL
complement(961228..961575)         DUF1493 family protein; BD984_04620                                                  N/A                 SalmonellaentericasubspentericaserovarReadingMDILLMDTIQQEVLTLFREEIPGYLDSNWKEIPLELDSDLFEVPGDDLHEALDKFEKKFNVDLSQVKWSCYFPWENTPLLTRWFKLKREDVERTRKPLTIRMFSESAKAGKWLYD
complement(961560..962009)         PHAGE_Erwini_EtG_NC_047833: hypothetical protein; BD984_04625; phage(gi100024)       9.31e-10            SalmonellaentericasubspentericaserovarReadingMDTTEELNGTYFYHGQSNLSAGELFDVIFLEQFCDELGIGIESGAAILAGQPWLKTRTKPGEAIKGTSVISRYGRMLLRNAQTPFGIRVPTPVGIRMRKTNNLAAVIARYVPWLGWVGLVNSIYQVSRRTQAKYNLIARPKDRIQWTSF

#### region 2 ####
1109173..1109184                   attL                                                                                 N/A                 TTTTAATATGAC
complement(1112024..1113580)       PHAGE_Clostr_phiCTC2B_NC_030951: methyltransferase type 11; BD984_05405; phage(gi100001)     2.63e-20            SalmonellaentericasubspentericaserovarReadingMASENDKNHRVRVAQYLRMSTDHQQYSLHNQSEYIKDYAEKNNMEIAYTYDDAGKSGVSIVGRHSLQQLLSDVEQKRIDIQAVLFYDVSRFGRFQNSDEAAYYSFLFERNGVDLIYCSEPIPTKDFPLESSVILNIKRSSAAYHSRNLSEKVFIGQVNLIKLGYHQGGMAGYGLRRLLVDENGIAKEILSFRKRKSIQTDRVILIPGPKNEIKIVNRIYDLFIDNNVPEFIIAERLNEQNIPAENGTLWTRAKIHQILTNEKYIGNNIYNKTSSKLKSRLVKNPKHEWVRCDKAYKPIISKKKYNKAQEIIQLRSIHLTNEELLEKLKQKLESNGKLSGFIIDEDDTGPSSSVYRTRFGGLLRAYTLIGYKPEHDYSYLKINEALRSFYSEIIEDFKGEILKSNCHIDEYKYAPMLYINDEFLISVLVTKCIHMKSGKLRWKVRFDNSQKADITIVIRMNSQNISPLDFYIIPKIENEYNKMCMTETNNIRLDLYRFDNLDKLLQIITRMKVRELYAA
complement(1113863..1115092)       PROPHAGE_Entero_Fels-2: integrase-like protein; BD984_05410; phage(gi16766052)       3.07e-151           SalmonellaentericasubspentericaserovarReadingMAKIAKKLTDTEIKSTKPAEKEVNLFDGDGLLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSLGTYPYLTLAKARALRDEYLSLLANGIDPQVHNTHKANALKDATEHTFQAVAKKWLDEKVRTSGISQDHANDIWRSLERNIFPTLGDTPIKEIRPKMLKQHLEPIEIRGVLETLRRIISRLNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPPSELPRFLVALNNASVRLETRLLIEWQLLTWVRPGEAVRTRWSDIDIETGMWNIPAEFMKMKKPHKVPLSKEALRVLDSMKAISGHREWVFPSIKAPLNHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEECGKFRTDVLEAALAHSKKDEIIAAYNRAEYLTERVVLMQWWSDYVSSQKYKVIAA
complement(1115258..1115620)       tRNA                                                                                 N/A                 GGGGCTGATTCTGGATTCGACGGGATTTGCGAAACCCAAGGTGCATGCCGAGGGGCGGTTGGCCTCGTAAAAAGCCGCAAAAAAATAGTCGCAAACGACGAAACCTACGCTTTAGCAGCTTAATAACCTGCTTAGAGCCCTCTCTCCCTAGCCTCCGCTCTTAGGACGGGGATCAAGAGAGGTCAAACCCAAAAGAGATCGCGCGGATGCCCTGCCTGGGGTTGAAGCGTTAAAACGAATCAGGCTAGTCTGGTAGTGGCGTGTCCGTCCGCAGGTGCCAGGCGAATGTAAAGACTGACTAAGCATGTAGTACCGAGGATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCA
complement(1115692..1116855)       HlyD family type I secretion periplasmic adaptor subunit; BD984_05420                N/A                 SalmonellaentericasubspentericaserovarReadingMDDFDIQRERAFSGASRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVSDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
complement(1116863..1119043)       PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; BD984_05425; phage(gi9630145)        6.14e-25            SalmonellaentericasubspentericaserovarReadingMTRAAPDVEEVLSERALSQWAQAISYVAGHYRVACSPGSIQANAPWFRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRGGQLLVIEHVNDEDAVDVFVIEEEGQRNRMTLSELLPEIFYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMVVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVIVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA
complement(1119040..1120449)       TolC family outer membrane protein; BD984_05430                                      N/A                 SalmonellaentericasubspentericaserovarReadingMGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAVGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP
complement(1120514..1131988)       PHAGE_Acinet_vB_AbaM_ME3_NC_041884: hypothetical protein; BD984_05435; phage(gi100051)     3.28e-10            SalmonellaentericasubspentericaserovarReadingMRLLAVVSKLTGVSTTVESSAVTLNAPSIVKLSVAREEISQLTRINQDLVVTLHSGETITIKNFYVTNDLGASQLVLAENDGTLWWVENPQAGLHFEQIADINELLVTSGTSHEAGGAVWPWVLAGAVAAGGIAAIASSGGGDSHHHSDGDNPPPDHTNPDGNPPDNSNPGGSNPNGNTPGSSNPVDTTPPLAPGKLLISADGKTVSGEAEAGSTITIKDPSGNVVGEGKADSDGKFSIDLTAPQISGEQLTVTATDDAGNTGPSATIDAPNIPLPDTPAITAAIDDAAPLTGTLSNNQFTNDNTPTLEGTGSAGTVIHIYANGQEIGSTTVDSSGSWHFAITSALADGENHFTAIATNVKGESSESARFSLTIDTLSPDAPRVELIADNTGLLTGPLQNNDRTDEAKPLFSGQGEAGNTITIKEGSTVIGSATVDENGRWTFTPTTPLSDGEHTFTVEQSDKAGNVSRVTTTPTIIVDTTPPDAAIIDNVAKDGTTVSGTAEAGSTVSIYDPAGNYLGSTITGENNHFSITLNPAQTHGERLEARIQDAVGNIGPATEFTASDSQYPAQPTILTVTDDAGAVTGLLKNGDATDDNRPTLSGIAEPGSTISINDNGFPVLTYPPIVADADGKWSFTPSLALADGDHVFTATATNDRGTSGQSVSFTIDIDTQPPVLEGLAVSDVGDRLTGTTEAGSTVVIKDSQGNTLGSGTAGDDGTFSIGISPAKINGETLSISVTDKAANSGPVETLNAPDKTAPAAPDGLIVATDGLSVSGQAEAGATVTIRDSSNTVLGSAVANGNGQFIVPLNTAQTNGQALIATATDVAKNESAAATVIAPDSTAPEMPKNVVISEDGTSISGTAEPGSAITIATPDGTPLGSGKADGEGHFTLPLVPAQTNGEQVTVTATDSANNVSPPTTAQAPDITAPDKPIITQVLDDVESFTGPLVNGQTTNDNRPTLSGTAEAGARVEIFDNGVSLGLATLQPNGGWTFTPSQNLGEGAHQLTVIATDAKGNASPAASFDLVVDTQSPQQPVITFITDDAPGILGSVAHLGLTNDSTPTINGTGEPGSTVHLYQNGARIADIIVGNSGVWSYAYTTASPLADDTYTFTVTASDSNGNTTPFSTDFTITIDTQAPAAPGVIGVTDGDGNTIDTNQITQESQPRLSGSGTAGDTIILYDNGNAIGQALVGTDGRWQFTPPAALGDGDHLLTARANDPAGNESPESISFTLRIDTQAPDAPQIVSAAITGGEGEALLANGSITNQRMPTLSGTGEPGAIITLYNNGVELATVQANPQGSWTYPLTRNLSEGLNILTATATDAAGNSSPTSGVFSVTLDTQPPAQPDAPLISDNVAPVIGNIGNNGATNDTTPTFSGTGEIGSTIILYNNGSEIGRTTVGDNGSWNFTPAALTPETYTITVTETDIAGNISPPSASVTFTLDTTAPANPVITFAEDNVGEVQDTIVSGATTDDNTPVIHGTGDIGSVITLYNGSSVVGVVTVDETGTWTLPMTSALPDGVYTLTAIAADAAGNSSGVSNSFTFTVDTVPLQPPVVNEILDDIAPVTGPLTDGAFTNDRTLTINGSGENGSTVTIYDNGVAIGTALVTDGGWTFNTPELSEASHALTFSATDDAGNTTAQTQPITITVDITAPPAPTIQTVDDDGTRVAGLADPYATVEIHHADGTLVGSAVANGTGEFVVTLSPAQTDGGTLTAIAIDRAGNNGPATNFPASDSGLPAVPAITAIEDDVGSVQGNIAAGGATDDTTPTLRGTTDIGSTVEVFIDGDSAGFATVDASGNWIFEIATPLSESTHYFTVQATNANGPGGLSAPVGITVDLSAPAQPVITSATDDVPGMTGTLDNGALTNDSRPTLNGTGEAGATIRILDNGVEIGSATVDQSGNWRFTPNAPLESIAHIFTAVATDPAGNSGQPSDGFTLNIDAQAPDVPVITSVIDDNNQPTVPVLPGQSTDDRQPILNGTGEPGATITIFDNGTPLGTAQVSENGSWTFPVPRNLSEGSHNLTVSATDPAGNTSAVSAPWTIVVDITPPAIPVLTSVVDDQPGITGNLVSGQLTNDATPTLNGRGEAGATINVYLDGNSASIGTTTVNSDGTWSFTPQTPLANGSHTFTLSATDPAGNSSAVSSGFVLTIDATPPAAPVIASVADNTAPVTGIVPNGGSTNETRPTLSGTGEAGTTISIYNGSALVGTAQVQANGSWSFTPSTSLGAGVWNLTATATDAAGNTSAASEIRSFTIDTTAPAAPVIDTVYDGTGPITGNLSSGQITDEARPVISGTREANTTIRLYDNGTLLAEIPADNSSSWRYTPDASLATGNHVITVIAVDAAGNASPVSDSVNFVVDTTPPLTPVITSVSDDQAPGLGTIANGQNTNDPTPTFSGTAEAGATITLYENGTVIGTTTAQPDGAWSVSTSTLASGTHVITAVATDAAGNSSPNSTAFTLTVDTTAPQTPILTSVVDDVAGGVTGNLANGQITNDNRPTLNGTAEAGSVVSIYDGNTLLGVTSANAGGAWSFTPTTGLNDGTRTLTVTATDPAGNVSPATSGFTIVVDTLAPTVPLITSIVDDVPNNTGAIGNGQSTNDTQPTLNGTAEANSAVSIFDNGALVATVNANASGNWSWTPTAALGQGSHTYSVSAADAAGNVSAASPSTTIIVDTIAPGAPGNLVINTTGNRVTGTAEAGSTVTITSETGVVLGTATADGTGSFTATLTPAQTNGQPLLAFAQDKAGNTGIAAGFTAPDTRVPEAPIITNVVDNVGIYTGAIANGQVTNDAQPTLNGTAQAGATVSIYNNGALLGTTTANASGNWSFTPTGNLTEGSHAFTATATNANGTGSVSTAATVIVDTLAPGTPSGTLSADGGSLSGLAEANSTVTVTLAGGVTLTTTAGSNGAWSLTLPTKQIEGQLINVTATDAAGNASGTLGITAPILPLAARDNITSLDLTSTAVTSTQNYSDYGLLLVGALGNVASVLGNDTAQVEFTIAEGGTGDVTIDAAATGIVLSLLSTQEIVVQRYDTSLGAWTTIVNTAVGDFANLLTLTGSGVTLNLSGLGEGQYRVLTYNTSLLATGSYTSLDVDVHQTSAGIISGPTISTGNVMADDTAPTGTTVTAITNANGVSTPVGAGGVDIQGQYGTLHINQDGSYTYTLTKPTAGYGHKESFTYTITQNGVGSSAAQLVINLGPAPVPGSVIATDNNASLVFDTHVSYVNNGPSTQSGVTVLSVGLGNVLNANLLDDMTNPIIFNVEEGATRTMTLQGTVGGVSLVSTFDLYVYRFNDAIQQYEQFRVQKGWINTLLLAGQSQPLTLTLPGGEYLFVLNTASGISVLTGYTLAISQDHTYAVDSITANTTGNVLTNDVAPTDSLLTEVNGVAIAATGTTEVNGLYGSLIIDARGNYTYTLKNGVGADSIKTPDSFIYTVKAPNGDTDTASLNITPTARALDAINDVSDTLSVATLQDTAAWLDSSVGSASWGLLGKSGSGSGTFDVATGTVLKGASLVFDVSTLITLGNLNISWAIQENGTVIRNGTVPVANITLGSATVTVNLSGLELDAGTYTLNFTGTNTLAGAATITPRVIGTTVDLDNFETSGTHTVLGNIFDGSDAAGAMDQLNTVNTRLSISGYNGSAATLDAAANTTSATIQGHYGTLQINLDGAYTYTLNNGIAMSSITSKEVFTYQLDDKMGHTDSATLTIDMAPQIVSTNQNDVLIGSAYGDTLIYHLLNGADATGGNGADRWQNFSTAQGDKIDIHELLTGWDHQAATLGNFVQVHTSGANTVISVDRDGVGSAFKSTDLVTLENVQLTLNDLLQNNHLITGG
complement(1132603..1133085)       PHAGE_Escher_500465_1_NC_049342: HNH endonuclease; BD984_05440; phage(gi100046)      1.78e-110           SalmonellaentericasubspentericaserovarReadingMTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANIGDSYVILKDGEAWLFGANFTPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRINREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDLKEREWQLDKARIMKNAGR
1133274..1133711                   PHAGE_Escher_500465_1_NC_049342: primase; BD984_05445; phage(gi100047)               1.84e-97            SalmonellaentericasubspentericaserovarReadingMPQISRTALVPYSAEQMYQLVNDVQSYPQFLPGCVGSRVLESSPAQMTAAVDVSKAGISKTFTTRNQLTRNQSILMHLVDGPFKKLIGGWKFTPLSPEACRIEFQLDFEFTNKLIELAFGRVFKELASNMVQAFTVRAKEVYRAG
1133701..1133991                   PHAGE_Escher_500465_1_NC_049342: exonuclease; BD984_05450; phage(gi100048)           7.89e-55            SalmonellaentericasubspentericaserovarReadingMPDKLVVEVAYALPEKQYLQRVTLEEGATVEEAIRASGLLELRTDIDLAKNKVGIYSRPVKLTDTVQDGDRVEIYRPLIADPKALRRQRAEKSAGR
complement(1134153..1134491)       PHAGE_Escher_500465_1_NC_049342: recombination protein; BD984_05455; phage(gi100049)     1.88e-73            SalmonellaentericasubspentericaserovarReadingMRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTPTDVAKVRVGMTQQQVAYALGTPMMTDPFGTNTWFYVFRQQPGHENVTQQTLTLTFNSSGVLTNIDNKPALTK
complement(1134640..1136301)       PHAGE_Escher_500465_1_NC_049342: putative single-stranded DNA binding protein; BD984_05460; phage(gi100050)     0.0                 SalmonellaentericasubspentericaserovarReadingMLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGATRADLCARFALKDTPAALRWLEENQLEEGRECLLRRVISSDGRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLDSYANEAALAQQMAARYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDFNPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDVNLQSQLYSAKQLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFELEQRIAKQISLARKHHVSPEALPQLYQSLLEEQQQLDDQADSLETLTLAVNKHHQQALETAQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFDEHHLSNDGADRVEFKVTTNPGQPLQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKELLAA
complement(1136387..1137265)       PHAGE_Escher_500465_1_NC_049342: hypothetical protein; BD984_05465; phage(gi100051)     0.0                 SalmonellaentericasubspentericaserovarReadingMNNHFKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLTDLDPDNALQQLSDVLEGRYISEKRFLLEAQVCQQERQKRISTAINEVVLHPGKVAHMIEFEVYIDETFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRSDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF
1137388..1137978                   PHAGE_Escher_500465_1_NC_049342: tail assembly protein; BD984_05470; phage(gi100053)     1.76e-53            SalmonellaentericasubspentericaserovarReadingMSSKEQKTPEGQAPEEIIMDQHEEVEAVEPNDSAEQVDPRDEKIANLEVQLAEAQTRERDTVLRIKAEMENLRRRTEQDIEKAHKFALEKFVNELLPVIDSLDRALEVADKANPDMAAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMVESEEVPAGNVLGIMQKGYTLNGRTIRAAMVTVAKAK
complement(1138013..1138618)       cytoplasmic protein; BD984_05475                                                     N/A                 SalmonellaentericasubspentericaserovarReadingMSEDYVIEWDKNFADDLNVVASVFLSHNPTLWPTIFSQLSTQPEIFEDEDEDEYGLQDVLDCSGGDLGNNDLAQAFLQVLRGEGLIHLVDWKGEDEEGELANFAADRFYELTKNLTDSEELRNLLVEITQEDEISDVCEAGDRYLDEIFERIQTELNKRGFQIFDLNEGADTYNVVVLPMSEYKKIEDFNTPWLEVQDFLS
complement(1138739..1140025)       PHAGE_Escher_500465_1_NC_049342: minor tail protein; BD984_05480; phage(gi100055)     0.0                 SalmonellaentericasubspentericaserovarReadingMEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMRLMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVREAWRLMAEKKEFTKEMMLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQVKVVPVKPLRESVAE
complement(1140045..1140836)       PHAGE_Escher_500465_1_NC_049342: minor tail protein; BD984_05485; phage(gi100056)     4.09e-172           SalmonellaentericasubspentericaserovarReadingMPVFALLALVAYSFSLALIVPGLLQKNSGWRRMAILSAVIALVCHAVALESRILPGGDSGQNLSLLNVGSLVSLMICTVMTIVASRNRGWLLLPIVYAFALINLAFATFMPNEYITHLEATPGMMVHIGLSLFSYATLIIAALYALQLAWIDYQLKNKKLAFSNEMPPLMSIERKMFHITQIGVVLLTLTLCTGLFYMHNLFSTENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAGILTLAYFGSRILQQFVS
1141002..1142363                   PHAGE_Escher_500465_1_NC_049342: tail length tape-measure protein; BD984_05490; phage(gi100057)     0.0                 SalmonellaentericasubspentericaserovarReadingMFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRSELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASIKPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLATKLKKGDGFDLNDFLEQLKQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAQGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
1142549..1142560                   attR                                                                                 N/A                 TTTTAATATGAC

#### region 3 ####
complement(1417242..1419242)       PHAGE_Escher_500465_2_NC_049343: hypothetical protein; BD984_06725; phage(gi100042)     0.0                 SalmonellaentericasubspentericaserovarReadingVKQYAIQPATLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNRLAERFPVHSHPLFIVAESGFGTGLNFLTLWQAFDGFRSEHPQATLQRLHFISFEKFPLTRGDLALAHQHWPELAPWAEQLQAQWPLPLPGCHRLLLDRGRVTLDLWFGDINELTDQLDATLNQTVDAFLDGFAPAKNPDMWTSNLFNAMARLARPGATLATFTSAGFVRRGLQEAGFTMQKRKGFGRKREMLCGVMEQHLMPTLSAPWFYRSGSEKRETAIIGGGIASALLSLALLRRGWQVTLYCADDQPAQGASGNRQGALYPLLSKHDAAINRFFPTAFTFARRLYDALPVSFDHDWCGVTQLGWDEKSQQKIAQMLSLALPAGLASALNAEEAVQAVGVTTRCGGITYPAGGWLCPEQLTRAVIALATEQGLQTRFRHTLTSLVAQESRWQLRFTSGETASHETVVLANGHQINRFDQTRPLPVYAVGGQVSHIPTTPALSALRQVLCYDGYLTPQNPHNQQHCIGASYHRGDESTVWREEDQRQNRQRLLDCFPDANWATEVDVSGNSARCGVRCATRDHLPMVGNVPDYHATLTHYADLADNKTSAAPAPVYPGLFMLGALGSRGLCSAPLCAEILAAQMSNEPIPLDASTLAALNPNRLWVRKLLKGKAVK
1419402..1420616                   PHAGE_Escher_500465_2_NC_049343: DNA adenine methyltransferase; BD984_06730; phage(gi100041)     0.0                 SalmonellaentericasubspentericaserovarReadingMKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDAGMRSQVWGNVKLDTTGLIDRKVVRFMSDASIYAYLSMEQAVADAGLAPEVYQNNPRVGLIAGSGGGSPKFQVFGADAMRSPRGLKAVGPYVVTKAMASGVSACLATPFKIYGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGAVRCMQMAMHGVDTPIDYLNSHGTSTPVGDVKELGAIREVFGDNSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTERELTTVMSNSFGFGGTNATLVMRKL
1420714..1421370                   CPBP family intramembrane metalloprotease; BD984_06735                               N/A                 SalmonellaentericasubspentericaserovarReadingMPTNTLDKIRHSLSCVAVLFGLLGIFVFASFSPSYAWLYLAGLAAPFIYSIVFVYAIAAWSIYSKYYPFLSLGRLSFVECFVPALALVCLTVLYNAFSGPEPWMAELSRQFFLHKFLNTLAMCFLAPVAEEIIFRGFLLNSSIGWGRYSRVSGIIITSLAFAFMHTQYLFAVTFVYLFVFSSILCVVRMRSRGLMIPIILHILNNAWVIFGLLFSATE
complement(1421437..1421955)       YbjP/YqhG family protein; BD984_06740                                                N/A                 SalmonellaentericasubspentericaserovarReadingMKTFSLVALILLLCSCSAPHHDSTQAVKQFYTSWMTTFTNDVNPPDDTTALMQRYVAKEVIHRLALIQSLYEQEIVGADYFMYAQDYAPEWIPQLRVGKAHPFLGGEKVDVLLATESTPIHLEVYTRWEEGRWKIYRVRDADKGYEQPIYDAGAITQAEAWSAKAAPEYKKH
complement(1421955..1422323)       PHAGE_Acinet_Acj61_NC_014661: gp27 baseplate hub subunit; BD984_06745; phage(gi311992945)     2.43e-08            SalmonellaentericasubspentericaserovarReadingMSWDKRMAVNYAKTHAGSHSQGRCAEFTRKAIQAGGITLGHTYHAKDYGPMLRSAGFTTIGTYEMPREGDVIIIQPYAGGNPSGHMAIYDGTEWYSDFKQRDMWAGPGYRAARPSYTIYRKN
complement(1422492..1422740)       PHAGE_Ralsto_RS138_NC_029107: transcriptional regulator; BD984_06750; phage(gi985760910)     1.15e-23            SalmonellaentericasubspentericaserovarReadingMEPKSQDWHRADIKSALEKRGITLRDLSRQAGLSPDSLRNVFTRSWPRAERIIADALGITPQEIWPSRYGDMQIKNDANTAE
1422913..1423287                   PHAGE_Pseudo_JBD93_NC_030918: hypothetical protein; BD984_06755; phage(gi100005)     2.12e-05            SalmonellaentericasubspentericaserovarReadingMAKEWFTVKECLGLPGFPGSEPAVRERLYKYSEGKEGVRRKRVKSKAEEFHISVFPLYVHRYLDDSGEEPTPEPISLQEAEPEDIWEMMFRLLTPEQRKQVTGRFKVRGMKAVFPFLFDDTPPR
1423467..1424645                   PHAGE_Escher_500465_2_NC_049343: hypothetical protein; BD984_06760; phage(gi100040)     0.0                 SalmonellaentericasubspentericaserovarReadingMTAVSQKTTTPSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHELGYSNTMVGIAVGIQFFATVLTRGYAGRLADQYGAKRSALQGMFACGLAGAAWLLAALLPVSAPVKFALLIVGRLILGFGESQLLTGTLTWGLGLVGPTRSGKVMSWNGMAIYGALAAGAPLGLLIHSHFGFAALAGTTMVLPLLAWAFNGTVRKVPAYTGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFISLYFVSNGWTMAGFTLTAFGGAFVLMRMLFGWMPDRFGGVKVAVVSLLVETAGLLLLWLAPTAWIALVGAALTGAGCSLIFPALGVEVVKRVPAQVRGTALGGYAAFQDISYGVTGPLAGMLATSCGYPSVFLAGAISAVVGILVTILSFRRG
complement(1424642..1425643)       PHAGE_Escher_500465_2_NC_049343: hypothetical protein; BD984_06765; phage(gi100039)     9.01e-129           SalmonellaentericasubspentericaserovarReadingMHPISGAPAQPPGEGRNPLSAASEQPLSMQQRTVLERLITRLISLTQQQSAEVWAGMKHDLGIKNDAPLLSRHFPAAEQNLTQRLGVAQQNHANRQVLSQLTELLGVGNNRQAVSDFIRQQYGQTALSQLTPDQLKNVLTLLQQGQLSIPQPQQRPATDRPLLPAEHNTLNQLVTKLAAATGESNKLIWQSMLELSGVKSGELIPAKQFTHLATWLQARQTLSLQHAPTLHTLQAALKQPLEPDELTAIKEYAQHTYQIQPQTVLTTAQVQDLLNHIFLRRVEREANELEPLSIQPIYRPFAPMIETVKNLSARPGLLFIALIIVLALFWLVS

#### region 4 ####
1900622..1900633                   attL                                                                                 N/A                 AAACTGGAAAAC
1904344..1906395                   PROPHAGE_Escher_MG1655: protease II; BD984_09125; phage(gi16129798)                  0.0                 SalmonellaentericasubspentericaserovarReadingMLPKANRIPYAMTVHGDTRIDNYYWLRDDTRSQPEVLDYLHQENEYGRKVMSSQQALQDRILKEIIDRIPPREVSAPYVKNGYRYRYIYEPGCEYAIYQRQSALSEEWDVWETLLDANQRAAHSEFYTLGGLAITPDNTIMALAEDYLSRRQYGLRFRNLESGNWYPELLDNVAPEFVWANDSLTLYYVRKHKKTLLPYQVWRHTIGTPSSQDELVYEEKDDTFYVSLHKTTSQHYVVIHLASATTSEVLLLDAELADAEPFSFLPRRKDHEYSLDHYQHKFYLRSNRNGKNFGLYRTRVRNENAWEELIPPREHIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWLAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDSGCYQSEHLWITARDGVEVPVSLVYHQKYFRKGQNPLLVYGYGSYGSSIDADFSSSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKRNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINERPELFHGVIAQVPFVDVLTTMLDESIPLTTGEFEEWGNPQDIEYYDYMKSYSPYDNVKAQDYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDQRLLLLCTDMDSGHGGKSGRFKSYEGVALEFAFLIGLAQGTLHSA
complement(1906432..1907130)       PHAGE_Yersin_fHe_Yen9_04_NC_042116: L shaped tail fiber protein; BD984_09130; phage(gi100273)     5.89e-18            SalmonellaentericasubspentericaserovarReadingMLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAIHRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTMKLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDIMRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFNNLDNMSPELRLTLKHYLEDVQADEQRSNGTPQ
complement(1907154..1907810)       carbon-nitrogen hydrolase family protein; BD984_09135                                N/A                 SalmonellaentericasubspentericaserovarReadingMSSWKIAAAQYAPLNASPAEHVAHHLEYIELAARQQCELLVFPSLSLLGCDERNKSLPAPPDEALLQPLTHAADTHHMTIIVGMPVEHNCRFVKGIAIFAPWLTSPLMFHKSHGACIARQRSAINVVDEQPEGGDIDPSFTLFTTSQCLNEPELHASTSRLQRFSHKYALAVLMANACGSSALWDESGQLIVRADCGSLLLTGLRTTEGWQGDIIPLR
complement(1907918..1908148)       PHAGE_Pectob_ZF40_NC_019522: putative DNA polymerase; BD984_09140; phage(gi422936677)     1.18e-22            SalmonellaentericasubspentericaserovarReadingMKTNLAQLEQAEMDKVNVDLAAAGVAFKERYNMPVVAEAVEREQPEHLRAWFRERLIAHRLASVSLSRLPYEPKVK
1908286..1908660                   CopC domain-containing protein YobA; BD984_09145                                     N/A                 SalmonellaentericasubspentericaserovarReadingMASSAPSRRLALLLLASTFATPAAWAHAHLTHQYPAANAAVTASPQALTLNFSEGIEPGFSGATITGPQQELIKTRPAKRNEQDKTQLIIPLEQPLKSGAYTVDWHVVSVDGHKTKGKYTFSVK
1908661..1909536                   copper homeostasis membrane protein CopD; BD984_09150                                N/A                 SalmonellaentericasubspentericaserovarReadingMMLTFVWITLRFIHFASLMLVYGCALYGAWLAPASIRRLMTRRFLHLQRHAAAWSVISAAFMLAIQGGLMGGGWPDVFSVSVWGAVLQTRFGAVWIWQIILALVTLVVVVIAPVKMQRRLLILTVAQFILLAGVGHATMRDGVAGTLQQINHALHLLCAAAWFGGLLPVAYCMRMAQGRWRQHAISAMMRFSRYGHFFVAGVLLTGIGNTLFITGFTAIWQTTYGQLLLLKCALVVLMVAIALTNRYVLVPRMRQENPRTDLWFVRMTQIEWGVGGIVLAIVSLFATLEPF
1909553..1909906                   PHAGE_Entero_PsP3_NC_005340: gp28; BD984_09155; phage(gi41057381)                    1.33e-11            SalmonellaentericasubspentericaserovarReadingMKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPGQALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMSLAPFIERAQKLCDPSNS
1910009..1910020                   attR                                                                                 N/A                 AAACTGGAAAAC
complement(1910289..1910864)       PHAGE_Entero_HK022_NC_002166: integrase; BD984_09160; phage(gi9634144)               4.20e-48            SalmonellaentericasubspentericaserovarReadingRSPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQRREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLILRATGLRLGTVIDRCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPTFHEIRSLAGRLYKNEHGEVFAQKLLGHTSANTTKLYLDERDDKAYMML
1910902..1911087                   PHAGE_Escher_phi191_NC_028660: hypothetical protein; BD984_09165; phage(gi966198073)     1.58e-11            SalmonellaentericasubspentericaserovarReadingMNGIIHQSEIQLKNLRKQRDEVYSDPTLTARQQADRVLMIEQNMKKVVDSFNQEYREMTGE

#### region 5 ####
1913926..1914672                   PHAGE_Bacill_SP_15_NC_031245: HNH homing endonuclease; BD984_09180; phage(gi100129)     1.86e-11            SalmonellaentericasubspentericaserovarReadingMSVKTVVITGGLSGIGEECCRKFAKAGYNVIFSGKDIKRGEELQNELCLFNPQCHFVLTDVSDERQVENLIKISIRIYGGIDVVINSAGTEGVAARYNKVTIDDFNYVFSTNVLGIMLVMKYALPIMCKERRGSVINISSLTGQTGSPGRSIYSASKHAVNGLTRSVALEVAGRGVRVNAIAPGPVDTDMFDRFVNSDESIKSMYIERMPSKRIITTEEIADIALFIASDAARSIIGQVILVDGGYSV
1915392..1915403                   attL                                                                                 N/A                 AAATGTGATAAC
complement(1915665..1916588)       PHAGE_Entero_HK022_NC_002166: integrase; BD984_09185; phage(gi9634144)               4.89e-82            SalmonellaentericasubspentericaserovarReadingNFIAQNHTPVALIEKLKGTDSFTVSAWIDRYEVLLQRRSLSVNTYKIRSNQLATVREKMGEMILAEVTTRHIAEFLESWIAEGKNTMAGAMRSVLSDMFREAIVEGRITTNPVEPTRAPEIKVARERLQLETYNATRTAAEHLPVWFPLAMDLALVTGQRREDIVNMKFSDIVDGRLHVTQIKTGMKIAFPLSLTLEAPGLRLGTVIDCCRLVSRTDFMISAGIRKNSPTGNIHPDGLTKKFVKARKISGVKFSDNPPTFHEIRSLAGRLYKDERGEEFAQKLLGHTSENTTKLYLDERDNKAYVML
complement(1916852..1917310)       PHAGE_Shigel_Stx_NC_029120: exodeoxyribonuclease VIII; BD984_09190; phage(gi985761253)     1.63e-25            SalmonellaentericasubspentericaserovarReadingNPDLRRTWCESFVAVHGVRDPDWYEYVPDNTPTTHEENAARLRQAGKCLRDIEAGRFQCDEEKPQPTGELADEPATPEAVEQDTTEHHPDPQPLENEPPVSQTEAGYQKIRAELHEARKNIPPKNPVDVGKQLAAVRGEYAEDISDPNDPKWV
1917302..1917550                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage endolysin; BD984_09195; phage(gi169257182)     1.86e-51            SalmonellaentericasubspentericaserovarReadingIRITGLENYTRCGVALKLDLVANPGQLELERHAARSAAWFFVTKGCLKYSGDLVRVTQIINGGQNGIGDQRERFEKAKSVLV
1917547..1918080                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; BD984_09200; phage(gi16765210)     4.67e-122           SalmonellaentericasubspentericaserovarReadingMNLLSALLKRYWLQLVFILLMAGAFIVGNVWSDRGWQKKWADRDSAESSQEVNAQTAARIIEQGRVIARDEAVKDAQAQAAKSAATAAGLSATVSQLRTEAKKLATRLDAAKHTANLAAAVRSKTTNADARMLANMLGDIAEEAKHYAGIADERYRAGMTCERVYDSVRESNNYRRY
complement(1918337..1918504)       lytic enzyme; BD984_09205                                                            N/A                 SalmonellaentericasubspentericaserovarReadingMKNIITIIVAIIIVFYAGMWSQKFLMEDECLDSGGSYNENGICNIAGSHQDVPPK
1918807..1919298                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, small subunit; BD984_09210; phage(gi169257184)     3.39e-111           SalmonellaentericasubspentericaserovarReadingMDGELKNLKCNISQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMETPVSQPAEHQDPNKMTPKERKGWFDSEKGRLWLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWSDKLERDKGWSADQLNEAQDVMDEVRILLVKAIQETADDDGE
1919285..1919852                   PHAGE_Salmon_Fels_1_NC_010391: bacteriophage terminase, large subunit; BD984_09215; phage(gi169257185)     2.02e-26            SalmonellaentericasubspentericaserovarReadingMTGNKYGSAAAVRREVAEYLRPPRRMPVAEGIKQFMFVPRGANTAVPWDDTLASQSFPKQQRPRNVSWFIPENWLAVHNRFFFVGLQAGGADRLPFPRYRWRGRWFFPGIQTYHHLYVCGDDTGREFAWSGNHRCEMAAFFAARSPAHDRHSFSLPGRSPSVVLALSTLRRLVPARDGKHGGVT
1919851..1921083                   PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage tail fiber protein; Lambda gpN homolog; BD984_09220; phage(gi169257204)     0.0                 SalmonellaentericasubspentericaserovarReadingMGEVQTKASLDSPALTGTPTAPTPETTAAGIEIATAAFVAAKVALVGSAPEALDTLQELADALGNDPNFATTVLNKLAGKQPLDETLTALSGKSTDGLIEYVGLRETINHAADALQKSQNGGDIPEKPLFVQNIGALPASGTAVAANRLASRGALPALTGTTRGSDSGLIMGEVYNNGYPTQYGNILRLTGTGDGEILIGWSGTNGAPAPAYIRSHRDTAEAEWSEWAMLYTTLNPPPDSHPVGAPIAWPSDATPAGYALMQGQSFDKSAYPLLAIAYPSGIIPDMGWTIKGKPASGRAVLSQEMDGNKSHSYTARAQDIDLGTKTTSSFDYGTKSTNTTGNHTNQFGGYINSHWGDSNHTSFQLGGGAWTQAAGDHAHTVYIGGHEHTMYIGPHGHVVIVDADGNAET
1921093..1921380                   PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; BD984_09225; phage(gi16765208)     1.39e-62            SalmonellaentericasubspentericaserovarReadingMDGGVDAAITAYFGSQLQERVQQNIIREYLGEQPVGTAFVIETGNSKHPWLVHAPTMRVPLIIDGTDAVYNATRAALLAIFQHNKSAGEDRKITSV
1921393..1921904                   tail fiber assembly protein; BD984_09230                                             N/A                 SalmonellaentericasubspentericaserovarReadingMGAGCGQVPPDSVARQIVLIPLLIFPPVILLFLTLKPKRGVCRRITAARRFTTQQPAIRFISPILVRYLKTSHQFHQVVDTKNGIVRLRSGMMKLRRPQPDFVKLKERKTDSCKRLKKSRRYRMQWIWTKQPIKKKLLFWHGESTGYRTVLILSLSGRRNQPVVYAA
complement(1922001..1922201)       PHAGE_Phage_Gifsy_1_NC_010392: PagK-like protein; BD984_09235; phage(gi169257211)     1.00e-39            SalmonellaentericasubspentericaserovarReadingMKHVKSVFLAMVLILPSSLYPALTIAADSQDHKKEETIKPMPKKWCNLWPTDIPFPEDWFKMCRGY
complement(1922591..1922771)       PROPHAGE_Escher_MG1655: IS3 transposase B; BD984_09240; phage(gi16128284)            4.31e-09            SalmonellaentericasubspentericaserovarReadingRRTVVNTHQQFRQDCDNVVREAFSQAKQRYGALRLAEEVNLGPEVQCKNDSVQPAPSGSAG
1925328..1925339                   attR                                                                                 N/A                 AAATGTGATAAC

#### region 6 ####
complement(2571051..2571608)       PHAGE_Entero_DE3_NC_042057: minor tail protein; BD984_12515; phage(gi100055)         2.15e-22            SalmonellaentericasubspentericaserovarReadingMKNIILSTLVITTGVLVVNVAQADTNAFSVGYAQSKVQDFKNIRGVNVKYRYEDDSPVSFISSLSYLYGDSQASGSVESEGIHYHDKFEVKYGSFMVGPAYRLSDNFSLYALAGVGTVKATFKEHSTQDGDSFSNKISSRKTGFAWGAGVQMNPLENIVVDVGYEGSNISSTKINGFNVGVGYRF
2572415..2572678                   virulence protein PagD; BD984_12520                                                  N/A                 SalmonellaentericasubspentericaserovarReadingMKHHAFILWSLLIFSFHVLASSGHYPGLQQASWEIFIYDFGSKTPQPPASTDKKQARQISSPSCPTAKPMMSAPVNDARKGNTFSRT
2572810..2573022                   PHAGE_Lactoc_bIL312_NC_002671: Csp; BD984_12525; phage(gi13095918)                   4.51e-06            SalmonellaentericasubspentericaserovarReadingMSRKMTGIVKTFDCKSGKGLITPSDGRKDVQVHISACRQHETEALIPGIRVEFCRINGLRGPTAANVYLS
2573439..2573960                   RICIN domain-containing protein; BD984_12530                                         N/A                 SalmonellaentericasubspentericaserovarReadingMTLLSGKTTLVLCLSSILSGCTTNGLPAPYSINLSFPVITQNQINSGGYYINDAEQIRTTDGLCLDTGPDQQNRLTLRECKHVQSQLFSFHRDRIMQGEKCLDAAGQGTKEGTPIILYSCTGNDNQRWLTDDNKIKGKQSRKCLGTNSIIVRKGDPVVLADCDFSRALEFTIR
2574151..2574390                   PHAGE_Entero_HK225_NC_019717: DNA damage-inducible protein; BD984_12535; phage(gi428782403)     4.28e-46            SalmonellaentericasubspentericaserovarReadingMFVELVYDKRNVEGLPGAREIILNELTKRVHQLFPDAQVKVKPMQANALNSDCTKTEKERLHRMLEEMFEEADMWLVAE
complement(2574608..2574772)       PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; BD984_12540; phage(gi41057343)     3.31e-05            SalmonellaentericasubspentericaserovarReadingMNKKTRQINGYILNDYNSVRPHHYNGALMPEEPENRYRFYCKTVTNIIDAQQNV
2575270..2576079                   PHAGE_Entero_cdtI_NC_009514: Cytolethal distending toxin B subunit; BD984_12545; phage(gi148609410)     1.12e-77            SalmonellaentericasubspentericaserovarReadingMKKPVFFLLTMIICSYISFACANISDYKVMTWNLQGSSASTESKWNVNVRQLLSGTAGVDILMVQEAGAVPTSAVPTGRHIQPFGVGIPIDEYTWNLGTTSRQDIRYIYHSAIDVGARRVNLAIVSRQRADNVYVLRPTTVASRPVIGIGLGNDVFLTAHALASGGPDAAAIVRVTINFFRQPQMRHLSWFLAGDFNRSPDRLENDLMTEHLERVVAVLAPTEPTQIGGGILDYGVIVDRAPYSQRVEALRNPQLASDHYPVAFLARSC
2576152..2576529                   PHAGE_Pseudo_Lu11_NC_017972: putative tail assembly protein; BD984_12550; phage(gi388684690)     1.99e-18            SalmonellaentericasubspentericaserovarReadingMSCFTSPAIMEMLGHYKWRVYEPFRFYLSEDKNDVIEVPVGFVTDLATVPRIFWSLLPPDGEYAKAAIIHDYLYHYPLRNRKESDLIFLDGMKVLGVPKWKRIIMYLAVRIFGWKYYHSHTIQHN
complement(2576677..2577219)       PHAGE_Erwini_vB_EamP_S6_NC_019514: endolysin; BD984_12555; phage(gi422935930)        1.78e-81            SalmonellaentericasubspentericaserovarReadingMTKDEIFAAILSREGGYVDHPDDRGGPTHWGITLTTARANGYMGDMRNLTRNQALKILEADYWYGPRLDQVAIISHSIAAELCDTGVNMGPSIPIKYFQRWLNVFNDQQKIYPDLIADGQIGPRTLSALTFFLSHRRDEGEMILIRALNCSQGQRYLELAEKRQANESFVYGWIKERVRL
complement(2577412..2578140)       typhoid-like toxin S-CDT ADP-ribosylating subunit PltA; BD984_12560                  N/A                 SalmonellaentericasubspentericaserovarReadingMKKLIFLTLSIVSFNNYAVDFVYRVDSTPPDVIFRDGFSLLGYNRNFQQFISGRSCSGGSSDSRYIATTSSVNQTYAIARAYYSRSTFKGNLYRYQIRADNNFYSLLPSITYLETQGGHFNAYEKTMMRLQREYVSTLSILPENIQKAVALVYDSATGLVKDGVSTMNSSYLGLSTTSNPGVIPFLPEPQTYTQQRIDAFGPLISSCFSIGSVCQSHRGQRADVYNMSFYDARPVIELILSK
complement(2578157..2578570)       typhoid-like toxin S-CDT binding subunit PltB; BD984_12565                           N/A                 SalmonellaentericasubspentericaserovarReadingMYINKFVPVYTLLILLYSFNASAEWTGDKTNAYYSDEVISELHVGQIDTSPYFCIKTVKANGSGTPVVACAVSKQSIWAPSFKELLDQARYFYSTGQSVRIHVQKNIWTYPLFVNTFSANALVGLSSCSATQCFGPK
2579183..2579328                   hypothetical protein; BD984_12570                                                    N/A                 SalmonellaentericasubspentericaserovarReadingMIFQTFPHPSLLRENLPKEKIISLNIFTVFQLIAEMFVDGVKTAGAC
complement(2579345..2579425)       PHAGE_Salmon_RE_2010_NC_019488: tail fiber protein; BD984_12575; phage(gi418489717)     6.09e-08            SalmonellaentericasubspentericaserovarReadingLKSLDFTGASDEATFTVIRCPALPQE

#### region 7 ####
2570001..2570014                   attL                                                                                 N/A                 TTTTGCTTTATTAA
complement(2581589..2582422)       PHAGE_Mycoba_Lamina13_NC_024143: HNH endonuclease; BD984_12590; phage(gi640884809)     2.39e-05            SalmonellaentericasubspentericaserovarReadingMHVFDNNGIELKAECSIGEEDGVYGLILESWGPGDRNKDYNIALDYIIERLVDSGVSQVVVYLASSSVRKHMHSLDERKIHPGEYFTLIGNSPRDIRLKMCGYQAYFSRTGRKEIPSGNRTKRILINVPGIYSDSFWASIIRGELSELSQPTDDESLLNMRVSKLIKKTLSQPEGSRKPVEVERLQKVYVRDPMVKAWILQQSKGICENCGKNAPFYLNDGNPYLEVHHVIPLSSGGADTTDNCVALCPNCHRELHYSKNAKELIEMLYVNINRLQK
complement(2582529..2583083)       PHAGE_Escher_pro483_NC_028943: DNA invertase; BD984_12595; phage(gi971758535)        1.17e-115           SalmonellaentericasubspentericaserovarReadingMLIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLRTLSAGDTLVVWKLDRLGRSMRHLVVLVEELRERGINFRSLTDSIDTSTPMGRFFFHVMGALAEMERELIVERTKAGLEAARAQGRIGGRRPKLTPEQWEQAGRLIASGVPRQKVAIIYDVGVSTLYKRFPAGDK
2583113..2583631                   PHAGE_Escher_pro483_NC_028943: tail fiber protein; BD984_12600; phage(gi971758534)     1.55e-67            SalmonellaentericasubspentericaserovarReadingMPFARYFCIFINVGLGEGSALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKAYPTNKLPDLRGEFIRGWDDGRGIDAGRVLLSIQAGMLEKHRHPVVANDGYDSKEEWELATIFRRAYTQGRGLDAAAAGGSLIPSPTLHSRGSIGNTGGSETRPRNIAFNYIVRAA
2583631..2583984                   PHAGE_Escher_pro483_NC_028943: putative tail fiber assembly protein; BD984_12605; phage(gi971758533)     1.37e-64            SalmonellaentericasubspentericaserovarReadingMDNAVLNSELITTKAGSITVYNYDGETREYISASTEYLAVGVGIPAYSCLDAPGTSKAGYTICRSVDLKSWEYVSDHRGEIVYNTETGDAKEITALGDYPENTTTIAPLTPYDKWDGE
complement(2583970..2584176)       PHAGE_Escher_pro483_NC_028943: tail fiber protein; BD984_12610; phage(gi971758531)     6.89e-31            SalmonellaentericasubspentericaserovarReadingIEAYGILTKNLGLGEAAKRNVGTGENQIPDMTSFASGDGWMKLPNGKILQYGRGAITPTLSTQTFTIPF
2584125..2584586                   hypothetical protein; BD984_12615                                                    N/A                 SalmonellaentericasubspentericaserovarReadingMPLLPNQDFWSEYHRLQFIDKVSFTLITPNIFGSSKQALTNDLRKLEKDTNANTVTTIFENKDGNLKLKGSHWAETLVDWVKDGGGSWLIKGRKTLKSKSTTVSSNQTAKIVLIEGEISEIELDGYSANDIKEIIALHQNRYTFKNAKSNCLD
2584561..2585025                   hypothetical protein; BD984_12620                                                    N/A                 SalmonellaentericasubspentericaserovarReadingMQNLTVWIRAIATFFLCLALASTDKTIYTLLEQASAGVIGSILGGITAGISVIFGILAVINKGEKSTDFTDYLDSLELDLKLLVMCLAVTIFLPYLRNYDIPLVNYPQHEFIPSKGKLFTALELFAIVLSLNLIAEVISCMILVVKKSFKIESK
complement(2585141..2585248)       hypothetical protein; BD984_12625                                                    N/A                 SalmonellaentericasubspentericaserovarReadingKAVDLIVKGMEGAINSKSVIYDFRIEVTNLLKC
2585281..2585496                   PHAGE_Pectob_ZF40_NC_019522: putative integrase; BD984_12630; phage(gi422936668)     1.73e-11            SalmonellaentericasubspentericaserovarReadingHDFFRLTSQTERGAQVKSNSLTVNFIKARDLAGNDQGTTLATFHEQNSLSERLYKEQGVDTRKLLGHKTQ
complement(2585547..2586161)       hypothetical protein; BD984_12635                                                    N/A                 SalmonellaentericasubspentericaserovarReadingMDCISKQKFTIILIVVLIALGCAAYFGDGEGYFIGSFVPEFTGVCLELLIILKVFEVWQQRDEKRKLIKVERRLREFLIFFLNHTCMDFPPSCRPGRFYGIDYEQNQKALEKLINHIEEKGLAENLVIQVQMYCKSECQIINNLIPVSSELENDHFKSWVRIAYYMNAVANGQEKASVAMIKILENIKRFDKESHDKKLYVGAN
complement(2586285..2587535)       NADP-dependent isocitrate dehydrogenase; BD984_12640                                 N/A                 SalmonellaentericasubspentericaserovarReadingMESKVVVPVEGKKITLQNGKLNVPENPIIPFIEGDGIGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIRDYRVAIKGPLTTPVGGGIRSLNVALRQELDLYVCLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAITNDRDSVTLVHKGNIMKFTEGAFKDWGYQLARDEFGGELIDGGPWLKIKNPNTGKEIVVKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECALFEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYDFERLMEGAKLLKCSEFGDAIIKNM
2587707..2588372                   23S rRNA pseudouridine(2457) synthase RluE; BD984_12645                              N/A                 SalmonellaentericasubspentericaserovarReadingMRQLISSENTMQKTSFRNHYVKRFSSRQASKSRKENQPKRVVLFNKPYDVLPQFTDEAGRRTLKDFIPVQGVYAAGRLDRDSEGLLVLTNDGALQARLTQPGKRTGKIYYVQVEGIPDNEALQALRTGVTLNDGPTLPAGIEIVAEPDWLWPRTPPIRERKNIPTSWLKVTLYEGRNRQVRRMTAHVGHPTLRLIRYSMGDYTLNGLDNGQWREIAQEKDR
2588369..2588698                   PHAGE_Klebsi_Marfa_NC_048798: tail fiber protein; BD984_12650; phage(gi100052)       9.17e-06            SalmonellaentericasubspentericaserovarReadingMKRLLIAFALLTPLSVNAASFDCQKAQAADEKAICAHLTLNDKDVEMHTKYQFLKGLFAMGSRGALQDAQQSWLKQRQQCKADVTCLTKAYNERLKQLDAIYDHIDKPL
2588389..2588402                   attR                                                                                 N/A                 TTTTGCTTTATTAA

#### region 8 ####
2772372..2772386                   attL                                                                                 N/A                 GCTACATTTTTATAA
2776460..2777131                   PHAGE_Erwini_vB_EhrS_59_NC_048198: holin; BD984_13595; phage(gi100034)               1.61e-107           SalmonellaentericasubspentericaserovarReadingMCGRFAQSQTREEYLAYLADKADRNIAYDPEPIGRYNVAPGTKVLLLSERDEQLLLDPVFWGYAPGWWDKPPLINARVETAPSSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIHRKDGKPIFMAAIGSTPFERGDDAEGFLIVTSAADKGLVDIHDRRPLVLSPGAALEWMRQGISGKEVEEIITDGAVPTDKFTWHAVKRAVGNVKNQGEKLIKPVT
complement(2777124..2777189)       PHAGE_Salmon_vB_SosS_Oslo_NC_018279: error-prone lesion bypass DNA polymerase V; BD984_13600; phage(gi399528790)     7.51e-05            SalmonellaentericasubspentericaserovarReadingMKREMLSPRYTTRFSDLPIVR
complement(2777252..2777457)       PHAGE_Salmon_SEN8_NC_047753: hypothetical protein; BD984_13605; phage(gi100026)      6.72e-14            SalmonellaentericasubspentericaserovarReadingMERVLIVERTRAGLAAAREQGRIGGRRPKLTLELWAQLGQEYRDSRRLFMMWGCRRCTENSRPLNWLAA
2777894..2778018                   PHAGE_Salmon_RE_2010_NC_019488: putative inner membrane protein; BD984_13610; phage(gi418489716)     1.43e-12            SalmonellaentericasubspentericaserovarReadingLTSFISSIAHAVSSLNKQLSLLSENLLKEKIISINIFAIFQCT
complement(2778086..2778604)       PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; BD984_13615; phage(gi15834244)     2.27e-59            SalmonellaentericasubspentericaserovarReadingMELKNVNRYIPDDPDYDSNFLYFRSEDGQDFYESLSKFTKKYKLCIDSENIIRSVSEDVSRLYPAGFSVVEVNKLPAGFNIYGDWQYKKGAVVAAPVNYHAKAETTRQKLLADANSTIADWRTELALGEISDDDKDSLTKWMAYIRALKTLDLSGVKDASAFTAIRWPSLPQ
complement(2778619..2779398)       PHAGE_Salmon_ST64B_NC_004313: tail protein; BD984_13620; phage(gi23505468)           4.07e-80            SalmonellaentericasubspentericaserovarReadingNANVTLHSTPEYSSVQPGNSTSGQTYTLFNSLMKPTPEDVGALSVNGGRLNGPLGIGTDNALGGNSIVFGDNDTGIKQNGDGILDTFANSQHTVRVAPGEMQVLGAIRAGNAKRMTMTSSNNSVLNAQFHLWGDGNRPTVIELDDDQGWHLYSQRNTDGSIQFVVNGQVIPDNYGNFDARYLTSGNVYTKGESDNRYVQNIQRGAPVWPGKVDEYGPAEAPAGCFLTQARHDPTTAYGVTFVYRPLQMWVGNGWRTING
complement(2779397..2779672)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; BD984_13625; phage(gi169257216)     4.10e-54            SalmonellaentericasubspentericaserovarReadingEPGTIHGTVPPAIQHLTTEILAEEGQYQVLARWDTPRVVKGVSFSLRLNVAAEDGSDRLVSSAGTPDTQYRFRGLMPGRYTLSVRAVNSQGQ
complement(2779690..2780175)       PHAGE_Phage_Gifsy_1_NC_010392: bacteriophage lysis protein; Rz; BD984_13630; phage(gi169257238)     2.15e-82            SalmonellaentericasubspentericaserovarReadingMNLLPVLLKKYWLQLSVTLLIAALAWATEHYRNNAITYKYQRDTATHNLKLANETITDMTKRQRDVAALDAKYTKELADAQNRNTDLQRRLAAGSRVRVEGRCTVPTTTTTKTASTRRVGNAATVELSPVAGQNVLDIRAGIISDQEKLKYLQEYIRTQCK
complement(2780172..2780609)       PHAGE_Salmon_SPN1S_NC_016761: endolysin; BD984_13635; phage(gi374531219)             1.49e-83            SalmonellaentericasubspentericaserovarReadingIAGLTGFIRAGRITPDQASTLGRKACEKALPLERQRAIANLVYSKRMGNNGPGDGWNYRGRGLIQITGLNNYRDCGNGIKTELVAHPDLLAQDTYAARSAAWFFATRGCQNYSGDLVRVTQIINGGQNGIGDRRERFEKAKSVLV
2780610..2781188                   PHAGE_Phage_Gifsy_2_NC_010393: conserved hypothetical bacteriophage protein; BD984_13640; phage(gi169257271)     2.45e-137           SalmonellaentericasubspentericaserovarReadingTRNSPLWVSNPKQQIAYLGVKYWARLYCPEVILGVYSPDEVEQREEREINPAPVQRMSVQEITSEVSTRTSAQESAANVDAVADDLRERIDTASSVDQAKAIRADIESQKALLGTALFTELKNKAVKRYYQVDAQNKVEAVINSIPNPGEPEAAEMFAKAESTLGAAKRHLGDELHDKYRITLDDMKPEYIG
2781231..2781470                   PHAGE_Phage_Gifsy_2_NC_010393: hypothetical protein; BD984_13645; phage(gi169257270)     1.91e-52            SalmonellaentericasubspentericaserovarReadingMRLINRSKQSPLGRRACDVALAAHHEKFGDYGRQKHVTNYTVVVDGVKVPVEVVNRATSYVATAMIGVRKLRNLPAQAN
2781511..2781759                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage excisionase; BD984_13650; phage(gi169257269)     2.25e-55            SalmonellaentericasubspentericaserovarReadingMSNIIQLTPNKWVSEKVLIAVTGLKPGTITRARKESWMLGREYLHISPDGNPKPSSECIYNREAVDQWIEAQKKNQPGAKTT
2781804..2783096                   PHAGE_Phage_Gifsy_2_NC_010393: bacteriophage integrase; BD984_13655; phage(gi169257268)     0.0                 SalmonellaentericasubspentericaserovarReadingMANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSSVCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEISSNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDHRTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEPDPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAGTIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQFEVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIKRAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWMSEKSAEQVSLLNQALSRYAPSLPQSMVAAQ
2783131..2783145                   attR                                                                                 N/A                 GCTACATTTTTATAA
2783291..2784493                   PHAGE_Agroba_Atu_ph07_NC_042013: hypothetical protein; BD984_13660; phage(gi100242)     9.67e-50            SalmonellaentericasubspentericaserovarReadingMTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQEDEFQWLSGLPFFKPDYLNWLREFRYNPAQVCVTNDNGKLNIRLTGPWREVIMWEVPLLAVISELVHHYRSPNAGVDQALDALESKLVDFTALTANLDMSRFHLMDFGTRRRFSREVQQAIVKRLQQESWFVGTSNYDLARRLALTPMGTQAHEWFQAHQQISPDLATSQRAALAAWLNEYPDQLGIALTDCITMDAFLRDFGIEFASRYQGLRHDSGDPVAWGEKAIAHYEKLGIDPLTKTLVFSDNLDLQKAVELYRHFASRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQIRKAS

#### region 9 ####
3183340..3184194                   PHAGE_Vibrio_Aphrodite1_NC_042100: minor tail protein; BD984_15550; phage(gi100055)     1.67e-05            SalmonellaentericasubspentericaserovarReadingMDALSRLLTLNAPQGSIDKNCPLGGDWQLPHAAGELSVIRWHTVTQGEAQLEMPTGDAMTLTPGKVVILPQNSAHRLRQSGEAPTHIVCGSLRLHATSRYFLTALPEVLCLAPPPHSPASIWLNAAILLLQQESERHLPGADVLYSQQCATLFTLAVRDWLSQAGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVETLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASESSFHKAFVREFGCTPGEYRKRVNALGR
complement(3184245..3184505)       efflux RND transporter permease subunit; BD984_15555                                 N/A                 SalmonellaentericasubspentericaserovarReadingTFSAEKLDEALYHGAVLRVRPKAMTVAVIIAGLLPVLWGTGAGSEVMSRIVAPMIGGMITAPLLSLFIIPAAYKLMWLRRHRRLAA
3184500..3184808                   ATP-binding protein; BD984_15560                                                     N/A                 SalmonellaentericasubspentericaserovarReadingKGVGSLRFEGRAYWITGDPIMLRRAISNLSNTMRYTPPGKTITLQIKEADDQIHIIVENPGTPIAPEHLPRLFDCFYRIDPSHQRKGEGSGIGLAIVKSIVI
3184946..3185191                   copper-binding protein; BD984_15565                                                  N/A                 SalmonellaentericasubspentericaserovarReadingMESRQLSATAHEMMNNGDAFAHQQMAQTQKPSAPATVENATPFSEMDDYEKAMVIHQSMNNAHSFAHEIQAEEHHKQIKRN
3185286..3185297                   attL                                                                                 N/A                 CCCTGCAGGATT
3185286..3185297                   attL                                                                                 N/A                 CCCTGCAGGATT
3185898..3186074                   PHAGE_Entero_phi80_NC_021190: DinI family protein; BD984_15570; phage(gi824479607)     1.55e-24            SalmonellaentericasubspentericaserovarReadingLVIGLKKRVHRIFPYALVNVKPMQGNALNSDASKSDREKLNRMLGEMFEEAEFWLVSE
3186422..3188251                   PHAGE_Salmon_g341c_NC_013059: O-polysaccharide acetyltransferase protein; BD984_15575; phage(gi255252697)     4.38e-71            SalmonellaentericasubspentericaserovarReadingMIYKKFRLDINGLRAFALISVVLYHFGVPYVSGGFIGVDVFFVISGFLMTGIVLERVDHKGVLDFYIARFLRIVPALVFAILLLMIFGLFTLSTNEYEALSKNAISSLLFYSNNYYAIHSSYFDSSSEFNFLLHTWSLSVEWQFYILYPLLVIIVKKLRFPVGLSLSVILAMSLAITLMRVTGTKEDIFYLIPTRAWEMLAGGLVYIASVRYKMPEWIKHCEVYGIVLIVVAVVILHSNGYWPSYSALAPVLGASMVILANKQNSLFTSNRIAQWVGKISYSVYLWHWPVIVAMKHYDIEFSAINIFFGVIVSFALGDISYRTIENTLRKRVKLQFNIVLFSSTLALCLFVMFTKGVSFRFSDTLKQVVEYRMDNSPWRPDICFLNPDQDYSAFSKCQDKMTEKSFVVWGDSHAAHLMPGLKSVFGNSLNITQRTASLCPPIIGLQKDDRPYCKDINDMVAKEISDNKPTTVLMSALWPVYPMRDYLPETIKFLKDNKVKNIIIVGPFPVWKKTMIDTIEDMGINSGRTVPWSMTDETRNLRDNDKYLRELAKEHSLTYISPLETMCTESYCKAIIGNRIAYPIQYDNAHLTPEGSGWFIEEVKKQISK
complement(3188305..3188748)       PHAGE_Escher_pro483_NC_028943: tail fiber assembly protein; BD984_15580; phage(gi971758532)     3.29e-36            SalmonellaentericasubspentericaserovarReadingMSIICFSSTSNTYFSEENIPAYKASGLWSNDFYALTDEEVDKYYMKTPPKGMYLGSSNGRIAWVCIPPPTQDDLISAANQEKKKRIDQANEHMNSRRWPGKAALGRLTGDELAQYNLWLDYLDALKAVDTLVAQNIACPIRKAIHIK
complement(3189126..3189653)       PHAGE_Salmon_SJ46_NC_031129: holin; BD984_15585; phage(gi100034)                     1.65e-14            SalmonellaentericasubspentericaserovarReadingMRHFKNFTKTTELTLVQQKLSENCSIQFIQDESGVDWYVLQKLFQPDTLKIQYDKIGLIIAADKDATKLFPLNCSVVEFADTDIPDGFQPGNFTYSNGVIAPVQIDYVALATAERDRRMTSVTAKINQLVEAQDDGDITAAELSELTALREYRTKLRRLALDVAPDINWPEYLNK
complement(3189656..3190132)       PHAGE_Entero_P88_NC_026014: tail fiber protein; BD984_15590; phage(gi744692742)      5.22e-08            SalmonellaentericasubspentericaserovarReadingESTGDIRAYISTRLGVIAAAENLQAGSAIFNKNGDVYGDIWGGGSGPGWLSAFVASKPARQYITMVGVYQNDKTKPFMLHDDGSGVFLATTDMLSGYVQSIRFGAVEHGNLYRSPGFADQLGYVITGVENGDSNDTPDRIQRRLLQLKVNGQWYTVGA
complement(3190112..3190522)       PHAGE_Salmon_ST64B_NC_004313: putative base plate assembly protein; BD984_15595; phage(gi23505463)     7.51e-96            SalmonellaentericasubspentericaserovarReadingMANHPLQNMITRAVITAIDTVRKCQTAGLKLIAGEKKENVEHLEPYGFTSAAQNGAEAVVLFPGGDRSHGVAVVVADRRFRLKGLARGEVALYDDQGQSVTLTRAGIVINGGGKPVIFTNATKARFEMPIESTGDIR
complement(3190522..3191580)       PHAGE_Salmon_ST64B_NC_004313: Tail protein; BD984_15600; phage(gi23505462)           0.0                 SalmonellaentericasubspentericaserovarReadingMNNTVFLRVNGRDWGGWTSVRISAGIDRIARDFNVSITRQWPGGEDVPPVKNGDAVEVLIGDDLVITGWVEALPLRYDAQTIMTGIVGRSKTADLIDCSASPAQHNGKNLFLIASALARPFGVDVVDAGAPAAAVIEAQPEHGETVVDCLNRLLGQAQALAYDDERGRLVLGRPGSMKAATALVLGENILSCDTERSVRERFSSYLVTGQRPGTDDDFGEATIAAIRQSTGDAGVTRYRPHTIQQSGTATTDSCKSRCEFEARQRAAKTLETTYTVQGWRQGNGELWKPNQAVVVYDPLNGFDNETLVIAEVTYSQDNNGTLTEIRVGPADAYLPEPFRPKAKKKVSEEADF
complement(3191577..3192545)       PHAGE_Entero_mEp235_NC_019708: major head subunit; BD984_15605; phage(gi428781815)     2.00e-73            SalmonellaentericasubspentericaserovarReadingAALISSDVAEGVVEPQRLPGIDTAPKQRLFIRDLIAPGRTSSPAIFWVQQTGFTNKAAVVAENTTKPYSDIAFATKITPVTTIAHMFKASKQILDDFAQLQSTVDAEMRYGLKYVEEQEILFGDGITLDPGLSPRGTWPTDSGSAAKQKMQRNMIAAAIRTTAISTAVHAVTTLKQPRDVPDVRGVNQPAGTGSDSDIITVMHPALDGVQTVGNGSSPPNYEDLKAIRTALNAAIDQEQLRIRDDVLFQQISVMRTDLNRDISARLAQVERTALRTPDDVLPALVLAATWYDDAGRESDILTRNPVPHPGFIPVEPLRVPVR
complement(3192550..3192783)       PHAGE_Entero_mEp235_NC_019708: head maturation protease; BD984_15610; phage(gi428781814)     1.34e-38            SalmonellaentericasubspentericaserovarReadingLRAMNGADVTVNINSPGGDMFEGLAIYNLLREYQGKVTVKVLGIAASAASVIAMAGDDIQIGRGAFLMIHNCWVVAMG
3192960..3193292                   hypothetical protein; BD984_15615                                                    N/A                 SalmonellaentericasubspentericaserovarReadingMVKNTVNDKSKQISIRIPHDVIDSMEALKRPDESNAGFIVTAMRGEVARRQATATGPESLQIGLNRALETLAKIEEIGERAGTDIRAIVDIAHAELEARQRKKSKDNPDQ
complement(3193372..3193968)       PHAGE_Acinet_AP22_NC_017984: putative DNA-binding protein; BD984_15620; phage(gi388570841)     6.79e-25            SalmonellaentericasubspentericaserovarReadingMNKLNALSGQGLTQPEIGQAAISAPTMSSLEMVDYINANRKAKAEAEGLSFPCKKYRKLSHKNFMPKVLRVLGEIQSAKFLADYIDDKGRTQPCYNFPKREACLMAMSYDYELQAQIFDYMTELERNINGDLVYTIQQMENIVSIARKASDEDSSDAGRRLRQRQDDLPLLDKAEKLVKDFRQFSFELIGGGKVEVSE
complement(3194070..3194267)       PHAGE_Entero_P4_NC_001609: transcriptional regulator; BD984_15625; phage(gi9627517)     4.78e-09            SalmonellaentericasubspentericaserovarReadingMSQSFIRLSEVQRRTGYSKAWIYRLIGQGKFPSSVKIGSRAIAFVESEVDDWINQRIEESRKEVA
complement(3194491..3195216)       hypothetical protein; BD984_15630                                                    N/A                 SalmonellaentericasubspentericaserovarReadingMPIIEDLPDLSHWKTVQEFSISQAAMLLSGIDPYDYEGGLDEVKKFQHERWKMAWGISEGIVSAIRRGVLTPVQCFAVRWVEHDQWNGYWEHFEIKPTNRMYEISKEKTLITRDSLFVWVDNEHVDFVRKPAPKKINKISSGWNTNSSNEIIDIEPVQVNSSPLLLPRYEHNCEGLEFVEEAIKQFWSTYDEHDPSTAPTKAEVTDYLKKKGASSNLAEAVDLVLRPFSVRKIGRRKVIKS
complement(3195556..3196743)       PROPHAGE_Escher_CFT073: putative prophage integrase; BD984_15635; phage(gi26250313)     1.63e-176           SalmonellaentericasubspentericaserovarReadingMKLTARQISTAKPTEKPYKLSDGGGLYLLVNPNGSRYWRMKYRYAGKEKLLSIGVYPDVTLAEARDKRTQAKRILAAGDDPSEVKQAEREAKNLAVNNSFELLALEWHEHKKPNWSSGYADDIMEYLRKDIFPYIGKKAITDIKPITMLSVLKKMEERGVLDKLKKTRQACRQIFTYAIITGRAEFNPVTDLAGALKTPKQQHFPHLMPAQIGSFIHAVNAYSGSKVTRIATLLLMYTSVRTIELRASEWTEFDLDNDLWQIPKERMKMRRPHLVPLSRQVKSHLLELKEITGWGKYVFPGRNDAHKPMSEASINQVIKRIGFAGKVTGHGFRHTMSTVLHEKGFNSAWIEAQLAHADRNTIRGTYNHAQYIDGRREMLQWYADYLDEQAGKTAG
3196917..3196928                   attR                                                                                 N/A                 CCCTGCAGGATT
3197246..3197608                   PHAGE_Salmon_SPN9CC_NC_017985: bactoprenol-linked glucose translocase; BD984_15640; phage(gi389060491)     9.15e-83            SalmonellaentericasubspentericaserovarReadingMLKLFAKYTSIGVLNTLIHWGVFAFCVYGMHTHQALANFSGFVIAVSFSFYANARFTFNASTTTLRYMMYVGFMGTLSAVVGWMADKCSLPPLLTLVTFSAISLICGFIYSKFIVFRDAK
3197605..3198531                   PHAGE_Salmon_SPN9CC_NC_017985: O-antigen conversion protein; BD984_15645; phage(gi389060490)     0.0                 SalmonellaentericasubspentericaserovarReadingMKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPLVIPLSFTRNFGKEPALFAGLDHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMSREVVENIKQMPERNLFMKGVLSWVGGKTDVVEYARAERIAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMSFLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKKRPKYIIKNEKKNG
3198512..3200164                   PHAGE_Salmon_epsilon34_NC_011976: GtrC; putative membrane protein; BD984_15650; phage(gi221328637)     8.83e-102           SalmonellaentericasubspentericaserovarReadingMRRKMVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDTISTSLLKFFSPHIYNAINSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFIANPALGQTNFWLVGSANYLWTNMFIAIYILISIYLSNGKKSNVILFVYAISSIFAGCSNENTSLVVVLISVVYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPIAWRVLEHFSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFILGAIAANVAFLASPAMPSRALNGALCFMILSISFVAHSAFTKFNKASIYLSVTTYAMAFLYFIPSYILYYSSIKSISKQTEIREEIIDRAKHNKQDQAIIPDYYFPPVLHAGPSLDTFNSEAMSRYYGIDLKITAPGFFDYSRAFNFKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDENTAMFISFKTKDGKIINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGARTNENITEIIK
3200550..3200803                   PROPHAGE_Xantho_33913: ISxac3 transposase; BD984_15655; phage(gi21231087)            1.71e-15            SalmonellaentericasubspentericaserovarReadingMSGKRYPEEFKIEAVRQVVERGHSVSSVATHLDITTHSLYARIKKYGSNSSTNKEIKSSQMIRPKSADSRKSSGLLTNGTYKAA
3200824..3201217                   IS3 family transposase; BD984_15660                                                  N/A                 SalmonellaentericasubspentericaserovarReadingSLQPMTKDRVLNALLMAVWRRNHPLMAVDPEIARTGEQNEPSWQLSQCGCRKLFPATEATDKGKDLRNERRSQKRYFLHRNVLQTPAWFERTDATGIKPISSTTQKCPGYPWFTDMLTLRLA
3201186..3201284                   PHAGE_Shigel_Stx_NC_029120: integrase; BD984_15665; phage(gi985761248)               2.87e-11            SalmonellaentericasubspentericaserovarReadingVIHRYAHLAPNHLTEHARKIDDIFGDDVPYEN
3201318..3201329                   attR                                                                                 N/A                 CCCTGCAGGATT
