gi|00000000|ref|CP097166.1|  Ligilactobacillus salivarius strain VHProbi A17 plasmid pA17A, 247948, gc%: 32.18%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
91990..92001                       attL                                                                                 N/A                 AAAATGATGTAG
105220..106065                     PHAGE_Staphy_SPbeta_like_NC_029119: DegV domain-containing protein; M3M92_08955; phage(gi985761237)     9.41e-06            LigilactobacillussalivariusMKKIITDSATNLNVTALNGIEHQSVGLTLICGERVFLDGADFDQAEFDKFIENSSTEIKSSCPSVESYLAAIGDADEVYIFTISSALSGSYNTAQTAKKMILEEDPNRKIHVFDTKVAGPAERMAAVKASELLNEGVDFSEVVTQVQCYIDHLKIFFSLQSLKNLANNGRVNKTIAKLAGVLKINVLGWANKEGKIEQLGKARGTKRAYQSLVNILAKHNFNSKKVVIDHANNEKGALALKDLIQSKYPGCQVEIGTCTALCSFYAEKGGLMVGCTVNGEK
106208..106558                     bacteriocin immunity protein; M3M92_08960                                            N/A                 LigilactobacillussalivariusMKEVNIKETKEVIHELYNSLMDRPQKPSGLLDITDVLLQVYKKLDTVKYPEYLINKLVNYIYSVGFDQKIRFMGRDGELLRKLADESNKAGLNSRYRADYSAKSQFYNLSEEIPRR
106579..106815                     hypothetical protein; M3M92_08965                                                    N/A                 LigilactobacillussalivariusMNLKNYLEIFKDANFLKIFLSSNLLNFAQSLVNITIIWLVYNQTNNAIFIAIAVTAMELPGIVFAPFLGIIMTDFQPS
106848..107501                     MFS transporter; M3M92_08970                                                         N/A                 LigilactobacillussalivariusMFVFLGFLINRNNDTLLFVFLGLNSLVGPVIDSCINVLIKELFDKEKLITTNSLMNVSFDIAYIFGTLASSLVVLTGKSKVTFIVIAIIFLLIGGILASIKNITAAKPQIPISFGKSIQHMSSSLKFLWGNRPLFNVIIASFLWNLLIWGSLPVVLPILSKLFNHSVLMYSSLNSVQSIGIIVGSLLVGMISVKMDKIKIIYLSMIFQSLFLIVFSL
107892..108200                     MazG-like protein; M3M92_08975                                                       N/A                 LigilactobacillussalivariusMDLKDVDRLSEEIRSKYHELEKELHGSTWSVEEDALAFLTDAGLVGRLTMDNQGRWPSENRQMLPSKIGECVWWLAVLAQRMDLDFEECVEEFLSNRLDSLK
complement(108468..108743)         PHAGE_Bacill_SPbeta_NC_001884: histone-like prokaryotic DNA-binding protein family; M3M92_08980; phage(gi9630187)     9.14e-34            LigilactobacillussalivariusMNKNELVEAIAEKMGTTKKEAEAAVSAFTETVKEALVDGKKVQIIGFGNFEVRERAARKGRNPQTGKEIEIPASKVPAFKPGKGLKDAVNK
109048..113682                     PHAGE_Bacill_vB_BsuM_Goe3_NC_048652: hypothetical protein; M3M92_08985; phage(gi100011)     1.18e-16            LigilactobacillussalivariusMEKLLGEKRRYKLYKAKSKWVVSAIITISGVTFLVTSPVSNAQADTVNGSESVKTEATQASSSSVQNNATAQTTVTTNSNSSNNVSNVQTDTVKEVATSNVDSVASQNQATTAQQAKTTADTADQTVPPTTYKDHVKGNVQTAWDNGYKGQGMVVAVIDSGADTNHKDFSKAPESPAISKEDADKKISELGYGKYASEKFPFVYNYASRDNNWVKDDGPDASEHGQHVAGIIGADGQPNGNERYAVGVAPETQLMMMRVFNDQFADENTDDIAQAIYDAVKLGANVIQMSLGQGVAAANLNDVEQKAVEYATQHGVFVSISASNNGNSASVTGEEVPYKPGGADGNFEPFSSSTVANPGASRNAMTVAAENSVVGAGDDMADFSSWGPLQDFTLKPDVSAPGVSVTSTGNDNRYNTMSGTSMAGPFNAGVAALVMQRLKATTNLNGADLVQATKALIMNTAKPMTQQGYDTPVSPRRQGAGEIDAGAATESPVYVVAADGTSSVSLRKVGDSTQFALTFKNLSDKDQTYTFDDFGGGLTEVRDADTGTFHDVYLAGAHVYGNKTVTVKAGQSATYNFTLSLTGLKENQLVEGWLRFVGNDGQNQLVVPYLAYYGDMTSEDVFDKAANQEGTVYGGNYFVNEDNYPRGVADEDSLKALVNLEGNYNWQQVAKLYQDGKVAFSPNADGKSDLLKPYAFVKQNLKGLKVEVLDKSGKVVRVVADEQGLDKSYYENGVNKDVTLSVSMRNNPNTLAWDGKVYDDKAGEMVNAADGEYTYRYVATLYNDGVNKVQTADYPVVIDTTAPVLSNVKYDAATHTLSFDYKDTGSGFTDYSYAVVKVNDKTFGYKLNDGKNSKFLDAAKTSGTFKAVLGSDTLAALTAAKNALSVAVSDVADNTSTVTLLVNGNNDATTKVSVWNATNGLELDQSSPDYQAATSTYNLRGNATSDFYYNGALVQVDNSGNFVVPVSTSDTAVVFTSDAAGKNVVYKLNTATPKAVFAWQVNNTVKENFGIVLDTVVSNNKDDVVVQAAVTKGDNVEAYARDYFTGAVYKADVKDGLATFHVKVTNNSGRTVLLGWTEVVGPTFNDVQRTSANGVYLGVDTDTENPTPAPAFTSADQLGTNVVQEKADSATIGNPGDLPGHSLKDLTTRADANPDIHFDYLKDNDYNWVGAQAVKDGVYNPSTQVFTLTGKVDPNVKSLVVLGDSYNEDDPVNKVNLNSDGTFSFQFHTAPTSQRPVAYVYTKDDGSTTRGTMELILDTVLPTLSLNNVANLQLDSNGDYQVYTNNKDFSVSGEATDNLDGYRFFFNGDNDYREFHNSGVNFVAEAHQDGSTVTNPYPAYKFSKTFNLADTTGETTHVYTLSVVDLTGNTVTRKFYVHYQPASDTVKTVTTDKDGATKVLVDYNNNTLQVKDNTGNWVNATAGVEAAKNYRVVNEYGNVVLLLNVLADKEQDNNKVQVNEVTNNKVEQTVVTKTVTNNKVEQTVVTKTVSNKSVAKVGKKAAEPVKVLPQTGENNSKSTSVLGAVLASIAGFLGALGLRRVKKD
113811..114170                     hypothetical protein; M3M92_08990                                                    N/A                 LigilactobacillussalivariusMTQDEKMTSFLFRLSKDLKQKLEKRAQLENKSVNATLQEIVSVTLKDPPKQVEQGSLEQRNFLGHKVAGKEIDQINGLVSIKGIYYRYLIEGNQSVNENIDYIVIEAVGNIITLRPLTT
114186..114998                     PROPHAGE_Escher_Sakai: FtsH protease regulator HflK; M3M92_08995; phage(gi15834404)     4.46e-10            LigilactobacillussalivariusMLGIKIVRQNCQGLVETLGKYSRSVEAGLHFYIPFIQRIQSVELAMHPLRLEKYSVITQDNAEIEASVTLNYHVTDAKKYTYENTDSVESMAQLVRGHLRDIIGRMDLNAALGSTSKINAELASAIGDLTNIYGINVDRVNIDELTPSVEIQKAMDKQLTADRERVAVIAKAEGEARNIKLTTDAKNQALVETAQAEAEATKKRADAESYRIKKIQEALESVSDNYFKDQSIVAFTKLAQSDTNLVVMSKEEISDLGNIPVIEKMLEMKK
115297..116028                     FAD-dependent oxidoreductase; M3M92_09000                                            N/A                 LigilactobacillussalivariusMLYITLWKEDDIMAEELPSYKTELISIENLEKDYYEIKIKKPNDMNWVAGQYMRLGLPTKEITEKKKLRALSFASLPEDDVILLGTRTGKEISNFKQNLLTVQPGEEVEVKGPLGQFTLPEDGNQALVFFAGGVGVTPIRALLEKLAKDKSERTIKFVYSSLDYYFYKEDFAEFKKSLPNAEFIFVRDENDVDRELTKLTSELANDALYYVSSSEKIVEAVSQSLQDKGIDAENIKHDILYGY
115862..115873                     attR                                                                                 N/A                 AAAATGATGTAG
116231..116439                     PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; M3M92_09005; phage(gi985761246)     5.79e-08            LigilactobacillussalivariusMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQSYMIEALTFLIRRFIVGCKNMANYSIKIGKRKIKNPFAT
116539..117111                     PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; M3M92_09010; phage(gi100019)     1.28e-30            LigilactobacillussalivariusMTENKATQERTPQERLQEEQEHKEHVHHTKINAAAIADHLLGNMHTLHVKLHQYHWYVKGANFFTLHEKFEELYNENEKWFDKLAERLITSGHKPASTTVEFEKYSILSEDAVNKYFKAEDMVENIIEDFRSTRDLTIRAIRLAQDEGDDALEDTLIAFKNDLDKNIWMLQAFIGKEALEDDDALDEDED
117256..117960                     Crp/Fnr family transcriptional regulator; M3M92_09015                                N/A                 LigilactobacillussalivariusMTKHTHHEIGDHAACIRLVPIFNHLEDSAMNYIAEKAHTKQYQKGEFLFRSQEKEDTLYIINRGKIRIYRLADSGKEQLVRILNPGDFTGEWTLFNPDAVHEEYAEAIRDTVVCMIQRKDVQDFLEQYPAISLKLLAEMSKRLESSERQTTQVALESVITRLVLFLAENVEPEMGNSPTITLPMGKKDIASYLGTTPETISRKFGELEDEGLIQQLSGKRIKILDLDDLLLYSE
complement(118135..118566)         PHAGE_Hypert_2_NC_014321: IS element Dka2 orfA; M3M92_09020; phage(gi300116744)      5.75e-22            LigilactobacillussalivariusMTNKIKDAIYTKRYVYNLHFHLIWCTKYRNKTFTNEKLSNEMKDILQRVADDNEIVIEKMEVMPDHVHMLISFPPRKSAVDVIKALKGRSAFLFLQTHPEIRQKQYWGGHLWSSSYYLGSLGNMSKDVVERYVNDQKYNAYKK
118666..119943                     PHAGE_Clostr_c_st_NC_007581: putative IS transposase (OrfB); M3M92_09025; phage(gi80159731)     3.76e-62            LigilactobacillussalivariusMKKMSDLEYHYGLKMRIYPSTNQKKIIKINGNIARTVYNKMVAIDQELYKLKQVKLPIDIVKERIKELKSRKNARNLSNHYQYMQDKNIDSLAKANAIQNYQKAWKMFRKVHSSGTPKFHKKSYRLSYQTNAQYGKDAKMDVYSASVKFLDKNHISLPKLGRLRVSGSHRRIIDNKDDIRIGTVTISKDTADRYFVSMQLGSDTPFVKKLAKTNSQVGVDLNTENFLTDSFGKVVANPRYYRTIKGKIAKAQKVLSRRQRRAKKEKRSLRDSKNYQKQRVLVAKLHDRVRNQRNNFLNHVTTALINNHDLVVVENLRSKNMLKNHALAMSISDVGWRSFLQKLDYKANLYNRTVISVNPKNTTQTCYACGFIMGTNGTDKLNLKDREWTCPNCHEHHIRDWNAAKNILAKGLDKLEKPKNLAKAK

#### region 2 ####
complement(203471..204586)         PHAGE_Mycoba_Littlee_NC_042322: holin; M3M92_09400; phage(gi100034)                  1.46e-05            LigilactobacillussalivariusMEKKDVYAYTPTVNIEKYEKLDSEERKDYLSLDKRMHRITEGFAYDVGKVLKDAQEKFRNQGRKDIFSFTDWLKSWGFAKSRAYQLINFTEYVDKLQNNTELDGQSMVETFNSLPKMMQYSIIKDRDPDHQNQVEKLLSEKVTETEQYKKVLQDFYNAKDALDVSQAKQKELEAANRELQIKNIAVQEENAKTQSKLIESQQKIHKLQTENYKLQNQPVEQIQVPPADYGEIKRLNKKLIQDLEKSEEKERSLREKLEQSQSESDKDLSHLEVELKKVKQEKLELEKLLQSDQVKQNLEDFKKATVIVAEIKRSLVEVGKKLRKDEIKALTAKDLESLDFGEIVVQVSDLIDCLNEIQETRRTIEGEYSEI
complement(204599..205630)         PHAGE_Strept_315.1_NC_004584: hypothetical protein; M3M92_09405; phage(gi28876156)     1.88e-09            LigilactobacillussalivariusMQKENKVPQNFLFIDVDLFNNPKYHTLSNTAKLVYSLYTSRFRISFYHYLEEDYTYYDAEKGLFIYFSNEDLAKILNVSTRSITNYKRELLEFGLIEVQDTKNNGHRIYVKDVEVTPTDLDKEDLVMPYFAPDKEEYPSEIISDTNTMENNSVITEKISNNKEKKILLSKRNLKTKDITYDSGTEYIPNNNSTQPQNNSYLRDLSVESIGNRIKNQISTPVFAKIKMLAQNSYEKIKFYADTIFKAKSQVMSRLLNNPNWLYRQEFQEATRFESNLLLSDGLEKSLLKLAEIMYKSDNEIRSEERLSYVYLRNGLANSTKKYLLDNFEFSDDERYQITQALAF
complement(206092..206244)         PHAGE_Clostr_CDKM9_NC_048642: recombination protein; M3M92_09410; phage(gi100049)     1.51e-05            LigilactobacillussalivariusMTHKNKRFTLRISDELANKLEKEAQRLGVSKNALVLFTLEKELDNEQKKK
206380..206544                     PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; M3M92_09415; phage(gi971820263)     1.86e-13            LigilactobacillussalivariusMSDNLPRYTLRIPREKLNKIRFIADYNGRSANKEIERLIDEHISKFEELHGAIK
complement(206814..207014)         PHAGE_Strept_SMP_NC_008721: hypothetical protein; M3M92_09420; phage(gi119953756)     4.45e-11            LigilactobacillussalivariusMLVNLINEKKNKKITSKQIANLLNTREATISDKLNGKSRFSFDEAITIQKVFFPEYKLEYLFKHDE
207221..207643                     PHAGE_Strept_SMP_NC_008721: putative repressor; M3M92_09425; phage(gi119953755)      4.22e-15            LigilactobacillussalivariusMSREEFLRTIIEDRYGSLRAFTKNIGMPYTTLVSILKRGIGNTSVDNILKICKHLGIPPESLYEDDIFFQDKSNITLIRNITQLSAENKKLVFDYINFLKNSTHTDLEIKSYYKLNSSNKAKVKEYSDLLYGSQEKNTNN
