gi|00000000|ref|CP102532.1|  Limosilactobacillus fermentum strain PCC chromosome, complete 2233760, gc%: 51.00%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
134711..134938                     PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; NUU04_00595; phage(gi588498272)     8.81e-10            LimosilactobacillusfermentumGQSIEQRPMMINQRNRIGDFELDTVVGPRGHSKAVLLTLINRKSRFLWTYRLKDRTTATVNEALTKFLTTFNGPVH
135020..135307                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; NUU04_00600; phage(gi48697273)     6.06e-06            LimosilactobacillusfermentumMTKQSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGKFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
135331..136236                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_00605; phage(gi48697274)     1.04e-44            LimosilactobacillusfermentumMDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELGIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLLEVSNVIPLIEKTKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTQIQNLVVA
136279..136578                     PHAGE_Staphy_phiPV83_NC_002486: transposase; NUU04_00610; phage(gi9635740)           3.18e-17            LimosilactobacillusfermentumGPHSFTVDRGTEFSGLVSLESQYGIKTYYCRAYTPAERGSNERFNRNLRYFYPKGTRFEHISAQDLTTTLLQINQRPLKILDWQTPYQVMLTNLSKNSD
complement(136620..137501)         beta-1,6-N-acetylglucosaminyltransferase; NUU04_00615                                N/A                 LimosilactobacillusfermentumMTHKHAFLFLVRKIDSATLEVLKTLDDPQHDFYIHVDAKSGPMDLTTITRNLQYSRAVLIPRVSVGWAAYSMVSAEMELLRYATSAKTQYSYYHLLSESDFPLVSNQHLQAFFAKQDLEFVEIERNNDANTRNRLKYYYPLQEWLGKRHGFLWILQKGLLMVEHLIRINRLKHEQEIPIIAKGSQWFSITDKFAKYVVSNSALVTRICRASRAPDEVFLQTLLLNSEFSEKVAKKANGNLRYIRWGQGNSPQTLGPDDFRILKQSGKLFARKINKQSDGLDLRQMVIDSMNKE
complement(137924..138721)         PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_00620; phage(gi48697274)     0.0                 LimosilactobacillusfermentumMHQESHHHQVTKMCRILGVSRAQYYRYRSPKPSKRRAEDEDLKQRILRIFAEFKQRYGAMKIHHELNLELQPLQRRCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRPNLLKQDFSNTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMATDLVLKALESAVKNRTITGDLIIHTDLGSQYTSDDYNQRLTALHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFDNYETAAAVLFEYVHAFYK
complement(138739..138990)         PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; NUU04_00625; phage(gi48697273)     4.45e-53            LimosilactobacillusfermentumMPTRYDKEFKQNIINLYKQGESAAQLAREYGIGYSTVHKWIQGQAKTQSGKSPDEIKAMEKRLASLSEENEILKKALGFLAQK
complement(139236..140231)         PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; NUU04_00630; phage(gi588498272)     1.08e-39            LimosilactobacillusfermentumMTNIKRTISKAYQQLSNFDRVRIETLLNQGFSQARIARELNRSRSTISREITRGSVLQRIPGHKVALIYFADTAAYLHAQRWERCRPKTMLEKNPEFYAACAAAIKQRPRVHTFKREHADEVVPSTPTVYRDIEAGRFELRTHDLPRKPSLRIKRSHSHTRTNKTKLGTSIDERPIEVQDRRQGGHWEGDLVKGKRVDSEPALLVLTERTSRFEIIIKLANYKASTCKVGLQSIIDDYGAEYFTTITFDNGSEFAQLDSVEGTDVYFAHPYSPWERGTNENQNGLLREFIPKGRSLHHYDIIDIQSFQDALNSRPRRILGYRSTAELMPEL
complement(140416..141435)         PROPHAGE_Neisse_MC58: IS30 family transposase; NUU04_00635; phage(gi15677611)        1.75e-38            LimosilactobacillusfermentumMALPSTTKHYQQLTPEERGEIEAYLNAGKSQADIARLTNRSRSTISREIKRGTIRQRNSDYLFFTKYFADTSQLIHDKARQNCRFGGLEKVCWLFFKMLKTALKRRPRIDSVDGFVHAFKQTHPDQPCPSTPTVYRYIDQGRLDIKNIDLPAKLRRHVKSNRHNHSRKNKRLAGTSIDERPDTINNRERFGDWEGDLVKGKRQASEPALMTLTERRVRYEIIVKIPNYHADTCLKELQATIDQHPGYFKTITFDNGSEFKLLDQVQGAQIYFAHPYSPWERGSNENQNGLIREYIPKGLSLHGFSEDDIAKVQDALNQKHRRTLGYANAAELIEAALAS
complement(141654..142841)         PROPHAGE_Escher_CFT073: transposase; NUU04_00640; phage(gi26246249)                  1.54e-60            LimosilactobacillusfermentumMNQFNKDIIAALSSDKDITLNEVLRRQIEVAANQFLQNELTAVLGYEPHTRIDRSKDDVNYRNGTYTRTIDTEYGEINLTIPRDRLNKFRNALFPPYVRRTDGLEEMVIKMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYSQYVCVFLDATYIPLRRGTVEREAVNVAIGIRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQSAIEANYPQAKFQRCWVHAERNLLGYVRKNDRREIITDFKAIRQAENLQAAKERLAAFSAKWESSYKRRIKNLVQMEELFTFFSFPTAIRQTIYSTNLIESFNKSLKKMVRRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF
complement(143224..143730)         cupin domain-containing protein; NUU04_00645                                         N/A                 LimosilactobacillusfermentumMPTKTDYVTQLNLTPHPEGGWYRQVYHSAKTTYDQTSLASRYEYTSIYFLLDGNSPSHLHRLLHDEIWYFHDGAPILVHCFYPNGFYEVVKLGRDIAAGEVLQFRVPAGTIFGSEVADPASFGLVSCAVAPGFDYHDFELFTQADLLAKYPDQKAVIKRLAYEKLPDF
143927..144616                     PHAGE_Altero_vB_AmeM_PT11_V22_NC_048847: hypothetical protein; NUU04_00650; phage(gi100030)     8.74e-09            LimosilactobacillusfermentumMKILIVDDDKEIVQLLEIYARNEGYEPVTAYNGKDAITKLNTMPDISLVILDLMMPEMNGMDVIRQVRKDSSIPILVLSAKTADMDKIQGLVTGADDYVTKPFNPLEVMARVKSLLRRSENQVTNDKPDVLNVGPLVINKDSHEVKTLKGDQIQLTALEFGILYLLASHPNRVFSADDIFERVWQQESVVSAKTVMVHVSHLRDKIEAATGGEKVIETVWGVGYKVENH

#### region 2 ####
301668..301679                     attL                                                                                 N/A                 TCGGTGGTTCGA
305445..306731                     PROPHAGE_Staphy_N315: transposase; NUU04_01440; phage(gi15927655)                    9.63e-59            LimosilactobacillusfermentumMTDYIKNILQIKDPNLHFTDVVFENNDGRETQVFIGTVSLKLDRCPHCGFADTFIKNGHSYQTIKYLSINESCPTMLRIGKQRLRCKNCQDSFMAKTNVVDKYCSIAKAVKHKALTMLESNVSQKDVSKFTGVSPSTIGRLLDSDQALLRFNSRTLPTNIAIDEFRGPQGKYCFIIVDNDTSQIYQILPDRLKSSITHYFDRFSLKERKRVKSVSTDLNSYYQGLVRRYFPNAKLVVDRFHIVSMLTRAFNQVRVAVTKQFDPNTREYRALKNSWRLYLLKSTSLNYTKEYYDRHLRQKVTMAERVGIGLDLDPQLAAGYELLQGAMTALEEHDVDQLMDLLFTKWDVPAPFQTVLKTLRKNSEGVYNATVLPYSNGRVEGINRMIKLIQRTAYGFTNFGHFIARIRLHQMGTEAEKRRRQAQAPAAA
307436..307816                     PHAGE_Bacill_Shbh1_NC_030925: head morphogenesis protein; NUU04_01445; phage(gi100068)     1.12e-31            LimosilactobacillusfermentumMELDRNQHSVYLLNYHLVMVVKYRRKVINDEISEYLKHRFVVVGQSYGINLQEWNHDIDHVHVLFRATPHTEMAKFLNAYKSSSSRMVKKPFPEIKRQLWKSAFWTQSYCLISTGGAPLESVKNVV
complement(307850..309037)         PROPHAGE_Escher_CFT073: transposase; NUU04_01450; phage(gi26246249)                  3.46e-61            LimosilactobacillusfermentumMNLFNKDIIAALSSDKDITLNEVLRRQIEVAANQFLQNELTAVLGYEPHTRIDRSKDDVNYRNGTYTRTIDTEYGEINLTIPRDRLNKFQNALFPPYVRRTDGLEEMVIKMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYSQYVCVFLDATYIPLRRGTVEREAVNVAIGIRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQSAIEANYPQAKFQRCWVHAERNLLGYVRKNDRREIITDFKAIRQAENLQAAKERLAAFSAKWESSYKRRIKNLVQMEDLFTFFSFPTAIRQTIYSTNLIESFNKSLKKMVRRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF
309376..309717                     PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_01455; phage(gi48697274)     4.47e-08            LimosilactobacillusfermentumRVFNQVAKASGTTPEMIHTDRGAAYTSTNYNEALRQEKVRHSRSAPGTPADNAVMEHWWADFKSIWFEHRPKAQTLAELQEQVRAGIMYFTNQFISAKRNDQTVAEYYHDLVG
309762..310099                     type II toxin-antitoxin system RelE/ParE family toxin; NUU04_01460                   N/A                 LimosilactobacillusfermentumIVPYYDWNEFKQFLNQLPDKGAAKLIATIQNIENNGLIIAERQLWVKKLENNLYEIRSKRASNIQRAIYFQVQGSQYLITNAFTKKRKKHQKVKRKLLGIDAASILTRRTNNGA
310096..310380                     PHAGE_Clostr_PhiS63_NC_017978: gp26; NUU04_01465; phage(gi388570671)                 9.74e-06            LimosilactobacillusfermentumMSKIDEYVTERSKNNPDFAKLVEQENIKLEVAVKVRDLRENMGMSQRAFASLIGKPQSTIARIENGSMNASTRVLSEIAQATNQRLTIQFMPVI
310414..310977                     hypothetical protein; NUU04_01470                                                    N/A                 LimosilactobacillusfermentumMDSGKQSLNNNKMLEAITNNDFRSLLKLVVENPIAHVNRSEYLAKVFKVTESDIINGHLDISLKERKKVAQKQITATVRNTTVISFLTGIPGGIAIAGTIPGDIIQNMVYSIRLAQQLAYIYDFDDLIEEDGKIRTNGLLLFLGTMAGVNGSASLLRVSSSNAIKYASKQILGKPLMKTLWYPLLKK
310953..311201                     hypothetical protein; NUU04_01475                                                    N/A                 LimosilactobacillusfermentumMVPIIKKITSIVAGKTLTRKGLASGIAKIVPVVGGVTSGSITMIGMEMSAKKLNSELLRGFEQNYSERDYEKDIKIIEAEII
311218..311514                     PHAGE_Lactob_521B_NC_048752: minor tail protein; NUU04_01480; phage(gi100056)        5.04e-29            LimosilactobacillusfermentumKGMLKNHKLARAITNASWSKLVSILQYKCDWYGKKLIQVNPAYTSQICINCGKNNHRLGLDKSEWLDVREWDCPNCGTRLDRDINAAQVILKKGLATQ
316747..316758                     attR                                                                                 N/A                 TCGGTGGTTCGA

#### region 3 ####
745978..745991                     attL                                                                                 N/A                 AGAAGATGGCGTTT
complement(752154..753143)         PHAGE_Entero_DE3_NC_042057: hypothetical protein; NUU04_03775; phage(gi100002)       6.35e-16            LimosilactobacillusfermentumMEKRRQVKLEDVAALAGVSKTTVSRVLNNRGYLSEATKQRVHEAMEQLHYRPNAIARQLFTQKTNLVGLVFPTVNDPFFGQLEAGLDECLYENGYRTLMGNSQNNPQKEEQYLQLLLNHQIDGLIVGAHNQAMPDYLQTNLPIVSIERAVAPQIPVVASDNYRGGQLATQRLLDAGCQHIIHTNYPKDVMTTNQDRRKAYEDLMSQAGYPAITYEVNYDTPMEEKKAIFARLFDEHPEVDGIFADNDTNAGLIIQVAKARGRRVPEDLKVVGFDGADGTRILFPELTTVQQSIDQMAAVAVNLLEQQIAGQTNVESVTLPVTLLEGTTG
complement(753165..753611)         PHAGE_Lactob_8014_B2_NC_047739: terminase small subunit; NUU04_03780; phage(gi100071)     1.64e-21            LimosilactobacillusfermentumMRIYLAGPFFSDEQIDRIARAEQALTQNQTVDSFFSPRLSDENSTPLLKEGTPEWAQMIFKKDVEEIDDADLVVAVADFVHANVDSGTAFEVGYAYHSNKPIVIVQELDEPLNLMLGQALTHYTTSVADLATLDFTNLPNHPYSGQTF
753712..754332                     DUF308 domain-containing protein; NUU04_03785                                        N/A                 LimosilactobacillusfermentumMILLVVFGGLIFVLGCFYLVNSWQQYHQWKFATLLVLVSLAVTVYGVINLPYWHKNSSAQTSTQTSAKSSSSGTSSNSISGYSNNPALSSSTANMTQEQKEAAVLKQLQSSYSKFGSVAFDSGSKTFQIDPSSGDEADSLKYLAQNPTQASSMGWSSLTDSLDKTSTQVSKLLGSDYSISLMNPNDTSQAMYTTKNGSKTYDIADQ
754380..754468                     tRNA                                                                                 N/A                 GGAGAGTTGGCAGAGTGGTAATGCACCGGACTCGAAATCCGGCGAACCCATGTTGAATGGGCGCGCAGGTTCAAATCCTGTACTCTCCT
complement(755360..756490)         PHAGE_Lactob_LF1_NC_019486: phage integrase; NUU04_03795; phage(gi418489411)         1.94e-88            LimosilactobacillusfermentumMTITKLKTGRYQARVTWYDANGKRINRKKSFDHKAEAAKWELEMNTLKRQGTLSVRSEEVFAEYFWSWYERYKDASVGDRTRRTYLTAYHALQGFMPPIPIGKITRRDYRTFMVRYGRNHSKSTVTKFNALYHACVKDAVMDGDIAKDFIRTTDVVFSNAKTRKIEYLSITEMHQLVAYLITSCNPHFTSKYMILTAIYTGARLGEIQGLTWGNINETEMTITIDHSYADETRTIKTTKNDSSNRVIRINHDLIRLLNQLKKPLAGAKSMVFLNQYGTIPTSAAVNKTLRESLAAIDLNKRGFHFHSLRHTHVAYLLSHNVPLYVIAKRLGHADISTTSRIYSYLIDEFREKTDNQIEMILDEANPNNHHNHHQIV
complement(756500..756961)         PHAGE_Lactob_LF1_NC_019486: Lj965 prophage repressor-like protein; NUU04_03800; phage(gi418489418)     3.14e-13            LimosilactobacillusfermentumMINGRYNAVIEWLCDYAESLSIRVKIMDSAPSAWSSVASPELRLIYFNPNWKPVLEQPAILAHEIAHIVVQSECIFPCESSTVREKVESEANRIAVKLLITYYEDHEGEIGTDNIMQFLERFGVPSYIINNLKWSAYRGGSFSGQKEHTFYLY
complement(756980..757351)         PHAGE_Staphy_P1105_NC_048636: holin; NUU04_03805; phage(gi100034)                    1.20e-14            LimosilactobacillusfermentumMVQAMQERGISQAELSRRTKINRSIIWGYVHGQYKAKQHNLYLISKVLDVNEAWLMGLTDNQRRDPSAAPSTSRFTTDEDTIDEMISTFHSWKGVPISEEQREYMKQDLKKFLDMTTKLSEKE
757523..757765                     PHAGE_Staphy_phiETA_NC_003288: similar to phage O1205 ORF5; NUU04_03810; phage(gi17426235)     2.09e-11            LimosilactobacillusfermentumMENKMETERIKFDYSLLKQKMIENRYNITTLSRDLSIGRITLGYKLNSDTYFTQNQICKICDLLGIEYREIPNYFFREPV
757823..758146                     PHAGE_Staphy_EW_NC_007056: ORF040; NUU04_03815; phage(gi66395845)                    7.83e-11            LimosilactobacillusfermentumMSKVSLSNLEISIPDNLVVIPKTELDRLWNDELVGRMWGITDVAKRLGVSDKWVRNEILYNPRFKLEIENLKLQGVVIKGPGTSPWRFQASKFGPWLDNHIQNFKWS
complement(758271..758420)         PHAGE_Clostr_CDKM15_NC_048643: minor tail protein; NUU04_03820; phage(gi100055)      4.99e-05            LimosilactobacillusfermentumMVDKRTRFTLRIDNAIYEKVKNEAVKEHRTVTSQIEAILDNYFKEREKE
758774..759868                     PHAGE_Lactob_LF1_NC_019486: DNA replication protein; NUU04_03825; phage(gi418489431)     2.11e-13            LimosilactobacillusfermentumMNPNFDGVKYFLNIPAFVAHDSRLKDPEKLLFGEIFSMLNTTGKFFMNNPSVALRLNKTVRAIQTYLSALEKLGYIKRSLIIDEKTKEVKGRFIQLGDEYYIQFEKMKHDLEVDTLKNELAPNSSVVSISDLSRKRGGEQDCTRGVNKSTPGGGEQDCTRVTNNSSGGGEQDCTYNRTLLKEHTKRTTTPPLPPKQVDNKQTFGNGDDGVVDKNDRQQQPDQTQSLELRFKQLWAKYPAKIGYNEAFAAYRSWVQASPNNTDEYLDKRLEKYLQHLAMNQWLIAMRPQKWFGGGFQDDYSYYDQPRPSQGAPGRKQGGRIKEQLPEWAQNQQQTQEQVTPEQIAQAKEALAKLRSTDQDQQEKR
760799..760812                     attR                                                                                 N/A                 AGAAGATGGCGTTT

#### region 4 ####
776535..776573                     attL                                                                                 N/A                 GCGGAATTTAATTTACACCAACATTTTGGACTTGACCAA
785148..785762                     PHAGE_Bacter_Diva_NC_028788: transposase; NUU04_03980; phage(gi971743568)            8.21e-37            LimosilactobacillusfermentumMRTSSLNRWIKQFLTDGLAGLIRPEHNHRYTLQTKRSAVKAYLSGTLSGQAILNRYQIRSLSQLHQWIVRYNNGQLSVAYATRKRARKVGRKVTFEEKRQITQWTIDHEYNYQAAAEKFNVSYQQVYSWVRKYQRTHDWESLQDNRGRHKGKTPTNEVERLRQEVRQLKAKAKEREVQIAFAKKLVEIHNREVERPDDIKRFRK
785759..786604                     PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfB; NUU04_03985; phage(gi24373866)       8.48e-27            LimosilactobacillusfermentumMSQSGYKVSDLVKAAGVSRQAYYKWLTHEPTVHDIQDQGILKLVKQLEAQHKHCVGYDKMTRLIKQERLSYTVNKKRVMCIMKEHSIKADYRQPKRKRVQEQETYEAQNTLNRQFEQAAANQVWVTDTTEIAYNIRKYKVRLHVVLDLYGQYPLSWIITPTETSTGAIKVFQMAKQKAGGLAPLIHTDRGAAYTLKAFNHYLASNNSQHSYSAPGTSADNAVMEHWWADFKSIWLAHSPQPQTFEDLEQLVTEGIDYFTHSFISGKRNDLTAAEYRFGKAN
786942..787274                     PHAGE_Bacill_vB_BceS_MY192_NC_048633: minor tail protein; NUU04_03990; phage(gi100055)     2.78e-05            LimosilactobacillusfermentumKINAFVGIDPGRYQSGEKDSSLRISKHGNAVARKILYRAIGQIDLAAKTSPCHIADYYERKKQFSQTKGFKKIAIASIHKLLRTIYILIIWSPVNKIDNLNRDFFVLCHD
complement(787260..788138)         PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_03995; phage(gi48697274)     5.09e-48            LimosilactobacillusfermentumMDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELGIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLIEKAKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTQIQNLVVA
complement(788162..788449)         PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; NUU04_04000; phage(gi48697273)     4.37e-06            LimosilactobacillusfermentumMTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFANDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
788536..789756                     PHAGE_Paenib_Vegas_NC_028767: transposase; NUU04_04005; phage(gi971741608)           1.10e-114           LimosilactobacillusfermentumMPKVELNLEDDELKELLLGDRDKAMQSIMAKILDEILKSEATEQIKAKAYERSDERTNSRNGYRVRQLTTRVGSLELHVPKLRHGNFSTQLFKRYQRSEQAFDLALMEMVIQGVSTRKVAEITKKLCGTTFSKSTVSALCSNLDDQVLDFNRRPLTQKYTFVYADAILFKVHRGHVVTSNSLLVAIGIDPSGRREVLGFDIGDSESKAAWMDFFSELKQRGLTNVDMFVSDAHCGLKDAITTQFQGSLWQRCQFHFSNDCTSILALKDRKEVANRLKDLFNAPTYDQAVERRDQLVKDWQTEFPKVVKKLENSFDELMVIYQLPEELRKRLRTNNTIERVNQEIRRRDRVIRIFPNDLSVLRLMGALLIEQNEKWAAGPRYLNMTVYHGIEKDDNSEEAGMLKLVK
complement(789873..790502)         PHAGE_Staphy_phiPV83_NC_002486: transposase; NUU04_04010; phage(gi9635740)           2.10e-10            LimosilactobacillusfermentumMTNIKRTISKAYQQLSNFDRVRIETLLNQGFSQARIARELNRSRSTISREITRGSVLQRIPGHKVALIYFADTVAYLHAQRRERCRPKTMLEKNPEFYAACAAAIKQRPRVHSVDSFVHTFKREHADEVVPSTPTVYRDIEAGRFELRTHDLPRKPSLRIKRSHSHTRTNKTKLGTSIDERPIEVQDRRQGGHWEGDLVKGKRVDSEPAL
790885..791235                     hypothetical protein; NUU04_04015                                                    N/A                 LimosilactobacillusfermentumMDELVKKLAGFGISSIILLVAMGATGLVGAAALTAALAALGPFGMIGGIALLGAIGLSADKIAEFGYEKITVLVIKEQLKTFSKENMIQKVSKYPISKGMKLKIIDYIEHANVTGE
791238..791534                     hypothetical protein; NUU04_04020                                                    N/A                 LimosilactobacillusfermentumMGLFDLFKTKKDELSWEDENTYKGATPNCPNCGTPLTKRYVFSEMYCENCRYGLDDIPNDMEDESIDVCDAALIWQSNGKDEDYTFGYSEAELEAALR
complement(791707..792063)         type II toxin-antitoxin system YafQ family toxin; NUU04_04025                        N/A                 LimosilactobacillusfermentumMKKLRFKPRATFNADLKRLTSLDKSIIDEVRAAIDLLLEQQQLPPEFEDHELNRRMSGYNEFHLRDTPKNKIPSETNDVLVVYTIDKDELVLIGIRVGSHDRLFPGQNRAKRYRKNDK
complement(792063..792341)         type II toxin-antitoxin system Phd/YefM family antitoxin; NUU04_04030                N/A                 LimosilactobacillusfermentumMTLALTQSDFRANLKKYLDQVNDEDETVYIARSNSRAVAIVSQEKMDWLERALKAKEGSLEYAIARDQLIKRHVLPDDEIVESDDDYWGQFK
792476..793165                     PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; NUU04_04035; phage(gi985761246)     3.31e-74            LimosilactobacillusfermentumMMKNYFKGRHFQQDIILVAVGYYFRFNLSYRDVVEILRDRGITVHHTTIMRWVHHYGPIFQVLWRRHKHSASQSWRVDETYIKVKGQWCYLYRAIDNQGLTLDFELRKHRDYQSAYHFLKRLFTTDGRPNCLVTDQYGGTLKAIKQVIKDGLLEKANHQCSKYRNNLIEQDHRFIKRHRVRSAGFQTIRTAAKTLAGVEVVHAIRKETRRNGSFFGFSVTAELKQLLIA
793262..793597                     hypothetical protein; NUU04_04040                                                    N/A                 LimosilactobacillusfermentumMGFMRPLRPYGGTYHPKFNFATVDQLTQEAQAAGLVVEKCYDFERPTPLKAGEQGLANWARQFFASELASFSPVEQDEILARLAARVRDELWDGHQWVADYRRIRCVAHKD
793798..794754                     PROPHAGE_Escher_CFT073: transposase; NUU04_04045; phage(gi26248360)                  3.62e-30            LimosilactobacillusfermentumMRKDVYERMRYFVLEKIKPNYSAIARQYGVDPRTVKAAYLRAQSGKTAVIRKRRSRRSKLDGYQDIIEDKYTAGCSARSIYDFIVEKGFTGKYTIVKDYCRRFRKVQTKKATIRVEHTIGLSAQVDWKEQVTMADRNGVPHTFSIFLYVLPYSKFKFLKLTLDQKQDTLFKCLFEAFKATGGIPKEIWFDNMSTVVDHKLSDFHHYRFNERFLSFSHDAGFHPIACRPFRPQTKGCVEALARTMGRLRPYDREFSTINDLNSIVNRLAKRLNHEKSQSNNQKPVELWAANCQTKCNGLSKNTSYGVSGYVRIIGVNSK
794785..796005                     PHAGE_Paenib_Vegas_NC_028767: transposase; NUU04_04050; phage(gi971741608)           4.99e-116           LimosilactobacillusfermentumMPKVELNLEDDELKELLLGDRDKAMQSIMAKILDEILKSEVTEQIKAKAYERSDERTNSRNGYRVRQLTTRVGTLELHVPKLRHGNFSTQLFKRYQRSEQAFDLALMEMVIQGVSTRKVAEITKKLCGTTFSKSTVSALCNNLDDQVLDFNRRPLTQKYAFVYADAILFKVHRGHVVTSNSLLVAIGIDPSGRREVLGFDIGDSESKAAWMDFFSELKQRGLTNVDMFVSDAHCGLKDAITTQFQGSLWQRCQFHFSNDCTSILALKDRKEVANRLKDLFNAPTYDQAVERRDQLVKDWQTEFPKVVKKLENSFDELMVIYQLPEELRKRLRTNNTIERVNQEIRRRDRVIRIFPNDLSVLRLMGALLIEQNEKWAAGPRYLNMTVYHGIEKDDNSEEAGMLKLVK
796013..796051                     attR                                                                                 N/A                 GCGGAATTTAATTTACACCAACATTTTGGACTTGACCAA
796109..797032                     PHAGE_Staphy_phiPV83_NC_002486: transposase; NUU04_04055; phage(gi9635740)           1.18e-63            LimosilactobacillusfermentumMSTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAGLAQTDFERKVSQRGRKSSLTKNLKHLIEEKIQVQKWSPEQVAHVVGIASKTVYNWIDQGWLDIQLPNLPDHGIRRHRAKEKRGTFNHGRSIEERPHKVETRQEFGHFEADTVLSGKRKGQAAATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQGKLKTLTVDHGKEFANYQTIERRTGTKVYFAHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDHQLVQINWYLNSRLLKCLNWHTPIEIFLLNLRH

#### region 5 ####
794775..794792                     attL                                                                                 N/A                 GAACTTCATTATGCCAAA
complement(807958..809322)         PHAGE_Bacill_G_NC_023719: gp344; NUU04_04110; phage(gi593777800)                     9.98e-05            LimosilactobacillusfermentumMDKRKIVIVGASHGGHESAIELLDKYNDVDVTVYEAGDFISFMSCGMQLYLENKVTAEDDVRNFAPEDVEKKGGHVYANHEVTAIHPEHKTVTVKDLTNNSEEEVQYDKLILSSGVTPKFLPVPGNGLKNIYLMRGRDWASKLMSAVNNPAIKNVAIVGAGYIGTEASEVFAKAGKHVTLMDMIDRPLGTYLNPELLDVLEPTFKKNMDLKMGVKIEGFNGNEKVESVKTDQGDIPADLVVVSAGVTPNTDWLKDTVDLDQRGWIKTDPYLRTNVKDVYAIGDAILPLSIPAGKPMPIALATTARREAQYVVDHIFEDKPDRAFKGVIGASALSVFDYHFATAGLNKFSAAKNKLDCQTSFYEDHMRPAYVPEADNPKVYVSLTFNPYTHQILGGAVLSKYDITAQGNVLALAISHKMRLEDLAEQDFFFQPGFDRQWSLLNLAAQHALGMARF
complement(809454..809828)         pyridoxamine 5'-phosphate oxidase family protein; NUU04_04115                        N/A                 LimosilactobacillusfermentumMLDSFLDVLQDKGPATIVSINGNPASVVNTWSQYINVVSDDIILIPAAGMHSIEQDFEKDPKHELIITIGSYNYSGTAGMGRGYHIHGSGQFINEGAYFDQMKAQFDWIRTVLVVKIHDVEQKI
complement(809822..810609)         PROPHAGE_Xantho_33913: IS1480 transposase; NUU04_04120; phage(gi21231089)            6.00e-59            LimosilactobacillusfermentumMKNYPSNITRQQFELIRPALENFRKRTKPRKYDLYEVFCAVLYVLKTGCQWRQVPGDFPEWRSVYNYYKIWSTKAEPTADSLLEQVFKKIVIARRTYQGRSALTSFIIVDAQSVKNTATAENKGYDAGKKISGIKRHLAVDINGFPQAIHMTRANVSDRDGASAMIALHAMHLRQVQNVLVDGGYSGVNFQLDVASNLNATVQVAKRNELHRFEVMPQRWVVERSFSWLENCRRLWKNCERQLTTSLQMVVLAFLALLLKRF
complement(810827..810880)         hypothetical protein; NUU04_04125                                                    N/A                 LimosilactobacillusfermentumMNAGFRYFYRGLNRINC
811216..811761                     hypothetical protein; NUU04_04130                                                    N/A                 LimosilactobacillusfermentumMQTNKKEDFIMLKVIQLFIGQSWELILNIIQWISINISVGWLAFGLAVITFLRNRHRKLRQSFEYSSGNNNFETAISIYNDSLGTEASQLLGIMVTDKKFYLYRKLLPYIIRVKLRLCKDSNSKTTHTTRSWGYNPLKGNKYETQDLLSLGGFLFAKLFDTRSAIFSKLLSGFGSFDQGFR
811772..812392                     PHAGE_Bacter_Diva_NC_028788: transposase; NUU04_04135; phage(gi971743568)            7.00e-36            LimosilactobacillusfermentumMHDGSLRRWIKGFLQEGVLGVRRSATNRRYSIDLKVAAVVDYQDNGLSRQEVLHKYNIRSNSQLTDWVIRYNSGKLLAPKGAGKRVRKMGRKVSYDEKIKIVQWALDHDSDYQVTAKEFDVSYNRVYDWVRKYQATGNWEVLKDRRGKKPRPKGDALTREEQLEEENRQLKAKVRRLEVERAFAKKLREIRNREVDDPQNTKRFRN
812380..813264                     PHAGE_Bacter_Diva_NC_028788: transposase; NUU04_04140; phage(gi971743567)            1.54e-26            LimosilactobacillusfermentumMQELVKEGYTVTELAAVANTSRKSYYIWLKKRQIKTQQEIENAKILAAIRQIEKRHLNCAGYRKVTAILNSDTSKIKEYTFSFDFPINIKRVRRIMREHGIKADIRQPRRNRVKEQQQYLEDNVLHRQFAPDQPNKVWVTDTTELTYGRGNKVRLHAIIDLYGNYALSYFISPTETAKDVIKAFELAKQKTSRLAPLIHTDRGSAYTSREFSNYLIQNQCVHSMSAPGTPADNAVIERWWCDFKHLWLAHQPAPQTYDQLLKLVAEGVKYFNTVEISGKRKNLTAVDYYRSEIA
813296..813727                     hypothetical protein; NUU04_04145                                                    N/A                 LimosilactobacillusfermentumMTGGSAWTYRLFLLFIDKIKSKNYKKQYEDKDLYPYLQMVNIQNGDEIAATGFIPIKSHEMRTIVIPKGRFLDAVKNRLTSNYKALKRFVNKKPVYIYFIYQTMSGTVKEFVVETDYQDSLGKDLDMEYLTKILAVQDKYKTK
813835..814419                     PHAGE_Vibrio_PWH3a_P1_NC_020863: resolvase domain-containing protein; NUU04_04150; phage(gi472342379)     8.40e-26            LimosilactobacillusfermentumMAKIGYARVISKEQHLDRQLAALKDVDKLFTDKLSGANTNRPELQKMLAYIREGDIVLVTELDRLGRNNQDITKIMNTIQNKGATLDVLNLPSMTGIADPNLRQLMTNLIIELYKYQAESERKRIIERQKQGIFLAKQQGKYHGRKPQYTEDDPRLLHAFKLYQTGMSDVDVARNTGIKRTTFIRYRKKCNIKR
814468..815331                     PHAGE_Bacill_G_NC_023719: gp245; NUU04_04155; phage(gi593777701)                     3.10e-22            LimosilactobacillusfermentumMIIQTKGLTKTYQSKVVVDHIDLAIKEGSLTALLGPNGAGKTTIISMLTKILNPTSGMIKMKPDIKISMVFQQSILDNDLTVMENLSIRNKLYKEAKSNHIDALIQKIGLTEFINQKYGRLSGGQRRRVDIARALLNQPDIIFLDEPTTGLDIQTRSAIWKLLHSLQSQNNLTIILTTHYLEEADNADEVYIIDHGKIIASGSADEIKAQNSSSKLVIVSEQADQLMALIPSKIIHTQINHKTICLKANSDEALSLLLKFRSFIKTFTYQEGTMDDAFLSLTGRKMR
815333..816193                     ABC transporter permease; NUU04_04160                                                N/A                 LimosilactobacillusfermentumMITLTRRNLLLYFRNRPGVFFSLLGAMISFLLYIVFLKKSMISSWKTVPSSHQLLDFWLIGGTLSVTAITTTFTSLGQLVKDKERKVIKDFYLTDLSHFEITMSYMLSAALIGFIMQIVMFALMIGYFSITDNLTMPWESLPAVICVALFSSLLAVVINMLFIQYISRFDSLNAIGTIVGTASGFLVGTYIPIGILPNFAQLLIKLTPGAYVAAIYRQILMADKLKTAFHGQQSHFEKTMGIKLEWHHLLTGMQTTVLLTIVFLLGIAVLLIVGLIRSKENVRTVD
816569..817492                     PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; NUU04_04165; phage(gi588498272)     6.32e-65            LimosilactobacillusfermentumMGTTILSFQNRVVIETLRNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAGLAQTDFERKVSQRGRKSSLTKNLKHLIEEKIQVQKWSPEQVAHVVGIAYKTVYNWIDQGWLDIQLPDLPDHGIRRHRAKEKRGTFNHGRSIEERPHKVETRQEFGHFEADTVLSGKRKGQAAATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQTIQRRTGTQVYFAHAYSPHERGSNENRNRVLRRFIPKGQAIEELSNYQLVQINWYLNSRPLKCLNWHTPIEIFLLNQRH
complement(817885..818970)         PHAGE_Lactob_LF1_NC_019486: phage integrase; NUU04_04170; phage(gi418489411)         1.45e-100           LimosilactobacillusfermentumMAQIIKKGPSWMVRVSIMGDDGKQHKKSKAGFKTKAAAKAYAAKMEFQKATGGVALVSGTMFPDYFKDWFNLYKRSNVTERTALTYHQVYNALKQYLNVPVEDIDRRRYRQFMVDFGSNRAKSTVSKFNSLIHACVKDAMYDGVVHKDFVASTNLVFDKSKTREVDYLSIDEIQKLVSHLVKTRNVHFTSKYMILTAIYTGARLGEIQALTWGDIKNNTISINKSWNETTQDFQPTKNESSIRTINVDDQLIALLKELNFNKKQIFVSQYHTVPTSAAVNKTLRESLKACHINRRGFHFHSLRHSHVAFLLANGIDLYAISKRLGHSDITTTSRVYSYMIDEYKNLTNNQIIKALGKLSSV
complement(819077..819604)         PHAGE_Lactob_LF1_NC_019486: Zn finger protein; NUU04_04175; phage(gi418489415)       1.11e-83            LimosilactobacillusfermentumMGNFSTLEKWILWGTTIICAIIGLSIDGFLGFILLAVIAYFATKFAIKKHDERFPASLTPQDREAMKKEKEEKARIKAEKKGNSLLNKMVENQKLAQNRKESIKRTKLKAKMKCPRCGSRNIQPAGVHKGGFSVGKAVGGAALTGGIGALAGFAGKQTKKSDWVCLDCGKSFTIK
complement(819847..820608)         PHAGE_Lactob_LF1_NC_019486: hypothetical protein; NUU04_04180; phage(gi418489416)     1.94e-174           LimosilactobacillusfermentumMDPNQIEAWKNFLPQSTIEYLVNPAARTTGQALDGVATALCWPLLKLRIIQKAKLEQFTKEIREKNKQIPVENRDSSKVGLAVKAIEEARYQLNEDDIRKLYVNLIASTVDNRKNNVVSPRLATVVSQFGPSEAKFLKTIYQQSGQQLPYGQLRLDLGNSYGYTFPTKIAIDDNSNIVNNFNSSLDILVSLGVVNDNQSNKLAKSDDKYSTIEKIIRITINKPIEYESNELNLVHSYISLTDFGHGLCKCIFE
complement(820805..821359)         hypothetical protein; NUU04_04185                                                    N/A                 LimosilactobacillusfermentumMKKIGLICTTVLMGLTLTACGSSPSQKSTKSSSSSSSTKAIKKHKTAKQSKKEKNKQGSISSASSSSSQSQTAPQQNTNNTQTEIANNSQQSSQQQFNKSDPNTWHNIPYKGYPSYDAYCEANGGDPEVQAETANMQHANNVQQGIENPDGSETQNFQNWLSARDNAWNNGNDDFPSYDQNRQW
complement(821409..821834)         PHAGE_Lactob_iLp84_NC_028783: toxin-antitoxin system; NUU04_04190; phage(gi971743093)     3.44e-24            LimosilactobacillusfermentumMTEISSYLEQVAFDHNINIVWTDKLAPETPPGCSIRYRSIVMNLNWHHPAEISFQLAHEISHILNGDETDICFYHATFTGKHSVEYKANTGAVKLMVPFYCQGVPKETINVYDFMESYEVPSHLDNIVREEVHNYYISNRY
complement(822020..822247)         PHAGE_Staphy_StB20_like_NC_028821: hypothetical protein; NUU04_04195; phage(gi971746525)     4.21e-13            LimosilactobacillusfermentumMSFVIPRDQSVSELSSFSEYTLNLIMDYYNLQDNQKYCYQFVNTRRYSQQLVEFVVEKIKFDSDLIEHLRKNKKR
complement(822266..823495)         transposase; NUU04_04200                                                             N/A                 LimosilactobacillusfermentumMKVIEWLLTTKFLGRSLYRARETPNFTSRTVRNNLNDGRINWQRLVCQVGGHLIKHLRPFIDRRRRLALIIDDTLFSREYATQTELLARVFDHDKQLYIKGYRALTLGWSDANTFLPINFALMSSKKPQNVLGKSAKTTDQRTIAGRRRRQAQQKMNLVSLQLVKQALINGVPADYVLFDSWYSSPKMFCELTKLGLNGVGMLKRSSKVYYQYRGRQYSVKALYKRLQASKYQPKQAYQYSCFVEAHVGNQKFKLRLVFVANRARQDDYLVLATTQLSLQPQEIIQLYARRWQIENYFKVAKQYLRLDKSQVQSYDGLCGHLAIVMIAYNLLAWQERQNEDDRTIGDLFFIMNEAMPDIELSQALVWFLNSLKAIINHELYARRTQIIQMMNQFFAFLPKRLVSLLTAS
complement(823753..824559)         PHAGE_Staphy_StB20_like_NC_028821: hypothetical protein; NUU04_04205; phage(gi971746525)     3.04e-110           LimosilactobacillusfermentumMENLSKRLVDKSIEAFIMGLEIYNKPTIRYRIEGFSFFICNAWELMLKAELLNKNIPIYYPNSDRTISLEKTIQKIYTDKKQPLRINLEKIIELRNTSTHFITEEYETIYAPFFQSCVLNFLEQIKRFHNVDVTRYVSQNFLTLTVNLNILSNEEIRGKYSQEMAERLISNKNELEFLENNNSSNDLYIPIRHEFVQIKDKSKADFTYAIDSTSDVTAKIITKLQDPKDKYKLSIKNVINSINKQIKTKSITFNYRTASGDASFNEYT
complement(824577..824897)         PHAGE_Lactob_LF1_NC_019486: xre family toxin-antitoxin system; NUU04_04210; phage(gi418489419)     1.36e-21            LimosilactobacillusfermentumMNIGERIAQLRKSRSMSQFQLAKTLNIATSTLGMYETNKRKPNMEMLEKLADFFGVSVDFLLGRPEKDDLKTADLADDDTIFTFEGKPIPEQDLEYMKRLLRGGRK
825078..825308                     PHAGE_Lister_A118_NC_003216: putative repressor protein; NUU04_04215; phage(gi16798820)     2.45e-11            LimosilactobacillusfermentumMAKPNKVLIELRRKRGESQKTAAKNIGITQSMLAMLETGDRRGSDATKMAIANYYGVSVEHIFFGSNITKRDKEDK
825305..826090                     PHAGE_Lactob_LF1_NC_019486: phage antirepressor; NUU04_04220; phage(gi418489421)     1.30e-125           LimosilactobacillusfermentumMMEHFNTDSVIRYVGESKQQVIDSRDVAQMIGKTHAHLMRDIDSYKEVLDQNPKLDSDRFFIESSYQAGTGKNYKCYLLTKQGCEFVANKLTGRKGTIFTATYVSLFNEYEAEHNGKTVAIDSSLEHEKLAYKREWLIEMRKQNVNKAHELRNQDVKLYLELGKVADDYQRPRMATDFRNEAICAMQALPVGARREYSATEIGNIIGLSPIAIGKWANKLGVKRDADMSYRDRDGAWRYFPEALKVFQDNALEIQDDDLGL
complement(826194..826400)         hypothetical protein; NUU04_04225                                                    N/A                 LimosilactobacillusfermentumMDDEVICPYCGSNEAGKLSPAGDADKFLIVSFSTKRNAVTDSGCTVDLYGCASCHKVWMEDDSISAEK
826468..826629                     hypothetical protein; NUU04_04230                                                    N/A                 LimosilactobacillusfermentumMDLIEIDVALYRGSHRLTQAELFELKKSSPSKEELDKLLNKTKMHRPTNKPAE
complement(826740..827060)         hypothetical protein; NUU04_04235                                                    N/A                 LimosilactobacillusfermentumMSLSKEQAACLRLVQQDGKAAAREMYNSENKIFQDLYSNDFFNSNMGVVNGELEVVDLSLSAKGQKELSLYMENKRAEFKNNFAFPLLVSIASAIIGALITYLFMK
827125..827445                     PHAGE_Lactob_LL_H_NC_009554: hypothetical protein; NUU04_04240; phage(gi148750868)     1.35e-10            LimosilactobacillusfermentumMEITLTDQDLLSLAKQVAPLISPAKPDQDWAKLEDIRADLFAGKAKSWIRLYIFDRFPEIQIENGHQGAWVVGAHGAGKITKIYLPYARVWMHEHHDDIDWTAKMP
827461..827589                     PHAGE_Lactob_LF1_NC_019486: hypothetical protein; NUU04_04245; phage(gi418489425)     1.29e-16            LimosilactobacillusfermentumMGPLLVIMAVYSIELVFNNVLLTERCHRLEMKLRNEHYKEDR
827589..827753                     PHAGE_Lactob_LF1_NC_019486: hypothetical protein; NUU04_04250; phage(gi418489426)     3.48e-24            LimosilactobacillusfermentumMTSTEGLAYVALFILAIALLLTNHLILATVAIVPYVLASFKYSFPQQKKAQRNR
complement(827929..828495)         hypothetical protein; NUU04_04255                                                    N/A                 LimosilactobacillusfermentumMYSVVALICSLVVNLVQAFSSYQDRKLNYKLSLESIKRDKENDAENRKLQKDILKLNHEFDIQLKELSNKHHIRATKLDDKVYIHRSLIDQMEKVYFKYIDLLLSEIKSSKTMPVEFSTECQALSSRVMIYCPEAIQHIQNIYSNNISDEQAGEEYDPKKGLQELVVNDLIPTISNSIISVERNKASD
828548..828757                     PHAGE_Lactob_LF1_NC_019486: hypothetical protein; NUU04_04260; phage(gi418489427)     6.46e-36            LimosilactobacillusfermentumMTNDELKIGQVSNRLLRLGDHLVTDANRLVLHEPKTRSEAIAEHDAIIEQAEKLVLYAKDWKHEVTGRF
828760..829755                     PHAGE_Lactob_LF1_NC_019486: RecT protein; NUU04_04265; phage(gi418489428)            3.04e-153           LimosilactobacillusfermentumMYQPTNAKQITSAVAERLDTLKDEGLALPAHYNAQNALKAAYLRLQTVKDRQGRPALTVCTEPSIANALLDMAIQGLSPAKNQCYFIVYGNELQMQRSYFGTIAALKRLDSIEDIDAQVIHQGDEFEIGADETGHIIVTKFKPSFANLDKPIKGAFAFIKLTNGRTAYTVMTKAIDVSWSQSRNRQNKVQDKFSDEMAKRTVINRAAKIFINTSDDSDLLTGSINAVTKAEYEEPTEPKDITQTAAEEQGSTAKLLADFQEAQQAEEEVKTKPAPVQAPKQPVANEKPKTKEDPKVPAKTSESEPEAKPASETDERQMSIDDFLKEGQNA
829748..830599                     PHAGE_Lactob_LF1_NC_019486: hypothetical protein; NUU04_04270; phage(gi418489429)     6.29e-179           LimosilactobacillusfermentumMLKLTPENYYSHETDWDYMSFSLYKDFTKCEAAALAKISEDWQPTSSPTPLLVGNYIHSYFESPEAHQAWLDRSETGAKTNREFMMTKPTKTNPDGHLRAEFKLADQMIQTLKNDKLFKFVYVPGEKEVIVTGKIGDHEWKGKIDSLVLNKGYFCDLKTVDDIHKKHWDAKNRRWTNFIEDRGYIMQAAIYQELIKQSFNKNCQPFIFAVSKQTPPDKGAFDFEDTDTQYLMKEALEEIKEKQDRFWQVMNGEVEPKHCGKCEYCRSMKELAAFQHVTDIEVD
830599..831120                     PHAGE_Strept_Abc2_NC_013645: single-stranded binding protein; NUU04_04275; phage(gi281416420)     5.67e-41            LimosilactobacillusfermentumMINRVVLTGRLTKDLELKYTQNGTAVARFTLAVSRQYKNKQTGERETDFISCEVWRQPAENLAKYAGKGSLIGVDGRIQTSHYTDRDGKEVYRTDVRIDSFALLSYRNNDANQSEQTGNYQANVNFNTPQEQPNLPPYGGMYANGTPANDAINGQTIDRMETHQPADITDLPF
831134..831826                     PHAGE_Staphy_CNPH82_NC_008722: putative DNA replication protein; NUU04_04280; phage(gi119953723)     2.87e-20            LimosilactobacillusfermentumMPKVKKVRARGFTQVDNRVIGDKRMSLKALGLFTYMWSKPDDWEFYVSVISNDFKDGRDSIRSAINELINLGYVKRTRKHKENGQLAAYDYILFDEPKTEKPSQAVTYDGKTYVGKTYVGKSATTNTYCTNTNLTNDWLIDNKLSSLPEKLGETERQWGMLSTKTKGSLEGLARQFGPQVVGEGLQAFNENGQYKSGLVKYIKKYIESQKAGPEPLKLSASLVKLERRKI
831897..832349                     hypothetical protein; NUU04_04285                                                    N/A                 LimosilactobacillusfermentumMNLLTRGLLCAIHMRFDDRLQIEDKAYIEEFGEPDFERETQKFNRRLRAIEKLRKSDDQLERERLRELEMAKRKGVIDGLRTIFLAKERKLVGAHKGTSEFPELWDMLLEWKIKRKLTLADAACISKRSFKTVKNELHKAAARKKRAEGQ
832464..832928                     PHAGE_Lactob_LF1_NC_019486: phage transcriptional regulator; NUU04_04290; phage(gi418489438)     7.99e-14            LimosilactobacillusfermentumMRLFEVIDPDQTAQSVADFLRGKGHYRYRGYPKLLEDEAVFGMVRSPVGDITGIHGSNGNRFEETMIAKAHCRLAISCVTDAIKSCLPAQQTILNERYINGAKRETVMQMVLIGGNDQYQEADITARTRFAAALDKFVAIRGCEDLIPPIQVWK
833274..834206                     PHAGE_Staphy_phiPV83_NC_002486: transposase; NUU04_04295; phage(gi9635740)           1.25e-50            LimosilactobacillusfermentumMSHILTLSDRTVIQTLLKVGYSQKQIAKEVGVAPSTINYELKRCPKGYYDADQAQEDCEKKLTRRGRKTLLTENLREFVRGIILEQRWSFEVIAHILQMPFKTLYNWLDKGWLDIKREVLPDHGVRYRKSHDGRGQYTRGAKFIDQRPDEANLRQEIGHFEVDTILSGKTRGEVLATFTDRKSRLMIIRRLPGRDSKAMTKAILELNEELRGLIKSITSDHGKEFAGFKEIEAYGIAHYFAHPYAPHERGTNERLNRELRLHIPKNQSIESVTDEELTMISKYLNWRPRKCLGWKTPLQVFFGDLSEKFD
834258..834461                     hypothetical protein; NUU04_04300                                                    N/A                 LimosilactobacillusfermentumMRNFVNVTIKTVNDIAMLPNILAKAVNFVTHNGHKNISKTYGGFTNSDWGKVGNDMKRGLISFGKAR
834445..834951                     PHAGE_Pseudo_MD8_NC_031091: hypothetical protein; NUU04_04305; phage(gi100029)       3.17e-08            LimosilactobacillusfermentumMEKQDSYSPKEPDNKNKVSKEDQEIIDQVKKLPISKKEQQDIIATMEMYSGPIPHPKILAGYQALYPDAAKKIIENGLDESRHRRQLETARQKRRGHLAWASMILLVIACLIFMLGSFYLILKGHKIIGPVFGATSFLALVGSFMSNINELSGNDDISKQNQNNNKSA
835071..836058                     IS30 family transposase; NUU04_04310                                                 N/A                 LimosilactobacillusfermentumMSYKHLTIKEREILMFLRAKGVIYPGCRVTTGAKSKHYFTGVKTLCRLFPKQSRLSSKAAELSQEAAIRQPSTITPSNCSLHLRSALVTRADYRSLGTSMVCLQHNLPSYLSTQFRKVLLTWYRYSAPSQTTSDPAFKEYTTSRSTDRLYLDPAPWFYQPASTYRLGNYCDWSNGSLHPFNGCRSASAYAYQKGCAKGLAGDKRLSTVRGHSRICSFYYTRSWDRISSSNQRKVRCYCLLARSIFATAWNKEYKWINLGIFSQANRYLYRTGRTLPKAVKSTSSQSVKLNPISIFQTVALSLA
complement(836105..836311)         PHAGE_Lactob_LF1_NC_019486: hypothetical protein; NUU04_04315; phage(gi418489439)     5.73e-36            LimosilactobacillusfermentumMSLEDKTKNAKDKVSGKAKEVEGKATGDKIRESQGKAEGLVGKAKDKLADAKDTAKDAVDNLKDKFDK
836898..837287                     hypothetical protein; NUU04_04320                                                    N/A                 LimosilactobacillusfermentumMGISDVIGLLKEVQSLAQDIKSKPLNDAIVNLQESVIGVGNDYLELEEKYNKLRKRVETSDNVYLDDDGFVCEKGKKSKYCPKCWNKDRKISLMPKHGIETFASQEVDKPYAFECAGCGWIVYSSKKDL
837342..837824                     hypothetical protein; NUU04_04325                                                    N/A                 LimosilactobacillusfermentumMIESLYVIFEVLIKFIKSKYESRLKAKTNDIEHVKNSENIEKLYNFTLYCAKSLYGNAFGEVKELFYRNKFDEMKEKLDEFEFQTHLSKKTLQIWKAVFEDMENVFKNYENWKCWKRYVNSNSEKFSYHREDELHNKENEDKAKLKEDIQRLKKCGDLRA
837845..838285                     PHAGE_Lactob_LfeSau_NC_029068: terminase small subunit; NUU04_04330; phage(gi985757725)     1.40e-49            LimosilactobacillusfermentumMSSISGKKLTNKQQAFIDAYCSVSKFNATDAARRAGYKHPNVQGAQNLLKLSDEIAERMEQLKEKSGASIMSQEEVAERLSRFADGSIRVQQLANNGKLVDAPVSPKDQLKALELLGKSYGMFVDKKEINGNLDIEIGMGDYDDEG
838272..838433                     hypothetical protein; NUU04_04335                                                    N/A                 LimosilactobacillusfermentumMMKVSMMAMVPVMTIAGLLLKPGLITKGVFITAIIVEFFMAFMASDYYADNQS
838414..838647                     PHAGE_Lactob_LfeSau_NC_029068: terminase large subunit; NUU04_04340; phage(gi985757727)     2.65e-42            LimosilactobacillusfermentumMPTINLNFPKPYNVFNKQIYDSLFDYSHFIEVWYGGASSGKSHGVVQKVVLKVLKHWNHPRKVLWLRKVDRTIKDSIF
complement(838695..839573)         PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_04345; phage(gi48697274)     1.17e-47            LimosilactobacillusfermentumMDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGKIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELGIHAVYLTSWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLIEKTKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYPTQIQNLVVA
complement(839597..839884)         PROPHAGE_Xantho_33913: ISxac3 transposase; NUU04_04350; phage(gi21231087)            2.40e-06            LimosilactobacillusfermentumMTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
840072..840488                     hypothetical protein; NUU04_04355                                                    N/A                 LimosilactobacillusfermentumMTGTNELSSSHVKTINDKITEFNEFLNKEEDCINRKYNEVKSVYQSEFEKWTVKKGEADSKLKEVIKLLPEFHDRNSQEIGTLYQEVTQQKARLEPLKSKQDGISKKIQDLRQKRLNLIEDYKSSLDEKNITIAKGRL
840594..841526                     PHAGE_Staphy_phiPV83_NC_002486: transposase; NUU04_04360; phage(gi9635740)           2.37e-50            LimosilactobacillusfermentumMSHILTLSDRTVIQTLLKVGYSQKQIAEEVGVAPSTINYELKRCPKGYYDADQAQEDCEKKLTHRGRKTLLTENLREFVRGIILEQRWSFEVIAHILQMPFKTLYNWLDKGWLDIKREVLPDHGVRYRKSHDGRGQYTRGAKFINQRPDEANLRQEIGHFEVDTILSGKTRGEVLATFTDRKSRLMIIRRLPGRDSKAMTKAILELNEELRGLIKSITSDHGKEFAGFKEIEAYGIAHYFAHPYAPHERGTNERLNRELRLHIPKNQSIESVTDEELTMISKYLNWRPRKCLGWKTPLQVFFGDLSEKFD
852885..852902                     attR                                                                                 N/A                 GAACTTCATTATGCCAAA

#### region 6 ####
891926..893314                     PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; NUU04_04600; phage(gi971757643)     2.71e-10            LimosilactobacillusfermentumMKDQRIARSLVIMVFGTFFGLLCSTLMNTGLPQLMRVFSVSEGTVQWIINAYMLTNAMMIPLSAYLIRRWSFRTLFIIATAVFLVGTVGGAVAPTFWTVVIARVVQAAGAGIMMPLVNVLAIRYAEPKKKGTIMGIIGLAFNFSPIIGPTVSGLILDDLSWRWLFLVIVPFSVLTLVAAVIQLPRIPHNENPHFDTRGMAIVSIGLWALLMGLSNVSTSPFWTWQVLGLLVVGAVALVIFYFSQRGVKAPLINFSVMAYDQFVVATLINMLIVATMFGNTILLPLLVQNVQQKSALVSGLVILPGALVTGFLSRLSGRLYDRLSVRRLVLFGLVVDGAGTLFQATIGAASGPVVLALFQAVRQLGLVSMLIPLQTHALGILPFDLVPDGVATFNTIRQVAASLGTAVLVSVVGLMGQWGHRGTLFGIQAGFATCFIFLVAAMMIAGRLKNQFKLGRPTVSAG
893433..894131                     PHAGE_Bacter_Diva_NC_028788: transposase; NUU04_04605; phage(gi971743568)            7.75e-29            LimosilactobacillusfermentumMKITYSTTTKLRLLSQFQNVNESLKVFADYHNVGAGSLKRWIQQYLTGRLANLERPVHNRRYPKKLKLRAVRDYRNHRLPTKEILLKYDIRGLSQLRNWVILYNNGKEPVRKRVRKMGRKVSYDEKIEIVKWVLKHNHDYKQAAQKFDITYSRAYAWTQKYEQANDWTALKDRRGKTRGRQPADHEEQLLKEIRDLKAKLREREVQIAFSKKLIEISNREVKRPNDIKRFKK
894068..894976                     PHAGE_Bacter_Diva_NC_028788: transposase; NUU04_04610; phage(gi971743567)            4.63e-24            LimosilactobacillusfermentumMDRNKQPGGEAAKRYQAVQEMTSSGEYTVSETARAAGISRQAYYKWLNRRLSLREQQEREVLEEIKRIKKRHQDSVGYGKMVRLLNKEGRLSYRVGIKRVSRIMKINGIRADYRQPKKDRQGAKQTYQDENLLNRQFKQEKPNQVWVTDTTELTYGTANKVRLHAILDLYGQRPAAWLISPTETREAAIKVFNQAAKASGTTPEMIYTDRGAAYTSTNYNEALRQEKVRHSLSAPGTPADNAVMEHWWADFKSIWLEHRPKAQTLAELQEQVRAGIMYFTNQFISAKRNDQTVAEYYHDLVG
complement(895129..895584)         PHAGE_Lactob_CL1_NC_028888: transposase; NUU04_04615; phage(gi971752663)             3.66e-44            LimosilactobacillusfermentumMTKEKIKDAIYTRRYIYNFHYHLIWVTKYRNQTFTTEVLSNEMKAILQQVADDNDIVIEKMEVMPDHINMLISFPPSKAPASAIKALKGRSAYIFLQNHPEIRCSQYWGGHLWSPSYYMSTLGNMSKEVVEKYINDQKYTETNKKPHKGAQ
895658..895996                     PHAGE_Lactob_Lb338_1_NC_012530: transposase; NUU04_04620; phage(gi226377679)         4.61e-05            LimosilactobacillusfermentumMKSMARMKYHYGLKMRCYPSDQQKQLIKINSDASRFIYNEMVAINKELMQLRRVKLPIDIVQDRIKQLTMRQNAKQMSNHYQFLEDKRIDSLTKANAIQNYRKAWNAFRKVHA
complement(896054..897241)         PROPHAGE_Escher_CFT073: transposase; NUU04_04625; phage(gi26246249)                  7.55e-61            LimosilactobacillusfermentumMNQFNKDIIAALSSDKDITLNEVLRRQIEVAANQFLQNELTAVLGYEPHTRIDRSKDDVNYRNGTYTRTIDTEYGEINLTIPRDRLNKFQNALFPPYVRRTDGLEEMVIKMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYSQYVCVFLDATYIPLRRGTVEREAVNVAIGIRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQSAIEANYPQAKFQRCWVHAERNLLGYVRKNDRREIITDFKAIRQAENLQAAKERLAAFSAKWESSYKRRIKNLVQMEELFTFFSFPTAIRQTIYSTNLIESFNKSLKKMVRRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF
complement(897373..898251)         PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_04630; phage(gi48697274)     1.21e-47            LimosilactobacillusfermentumMDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSLRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELGIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLIEKAKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTQIQNLVVA
complement(898275..898562)         PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; NUU04_04635; phage(gi48697273)     5.72e-06            LimosilactobacillusfermentumMTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
898684..899598                     PHAGE_Lactob_Lb338_1_NC_012530: transposase; NUU04_04640; phage(gi226377679)         1.35e-52            LimosilactobacillusfermentumATGVPKFHRKSYHWRYQTNCQYPGQKTALLTNGTVCFLDNSHVKVPKIGLLRVAGSQARLLKRICETRIGTVTLTKDSADRFFLSMQLASDESFVKVSKATHGHVGIDLNTDNFLTDSEGNIVPNPRYYRTIKGKLAKEQRILSRRQQRAKKEHRSLRDSKNYQKQRLLVAKLHAKVMNQRHNFLQQISTALIKNHDLVVAEELRSKNLLKNHALALSISDVGWRTFLGMLAYKAKLYGRQFITINPRNTTQTCRDCGFVMGTNGTDKLTLDDRNWTCPNCGIHHIRDWNAAKNILDKGIAKLA

#### region 7 ####
1151020..1151032                   attL                                                                                 N/A                 TTTAGCAGTTCCT
1160835..1161842                   PHAGE_Entero_DE3_NC_042057: hypothetical protein; NUU04_05970; phage(gi100002)       6.61e-19            LimosilactobacillusfermentumMATLKDIAQRAHIATSTVSRILNYDPSLSVNDETKKRVFAIAEELNYQKPVRKNVPARSTRIGVILWCRRERELQDLYYSSIHMGIEEYAKYHQCYLTTYYQDDLWDGLGKLDGVIVIGSNQYTDEQIDVLNQLTIPVVFVDGNYLTKGFSSVITDFSAATEQIIEHFVATGRQKIGMLAGDLNLTETNDDLIDFRFQDFKRQLQSQGNYHPEWVFLGQFDPESGYQVIHQDFSKLSPDDRPNALLIANDAMAIGALKALSDLNIEVSRDVSVISFNDTSIAEYANPSLSSVHVETHEMGKKALQVLLEKIANPLTPIYLITLPTKLIYRDSSVN
complement(1161900..1162787)       PHAGE_Bacter_Diva_NC_028788: transposase; NUU04_05975; phage(gi971743567)            2.95e-30            LimosilactobacillusfermentumMTLIDDLRRVFKTSISFILKAVKIPRSTYYYTKHSQGRKYDDDQVIQAIDEIRQTDAKYTQKYGYRRITLVMHEQGFKVNHKRVLRIMKEQGWTCQAFNKQTRKYNSYKGVVGRIAKNKLHRRFKTDRPYQKLVADVSEFRYGQMSQSERIYLEPIMDLFSGEILAFNISAHPTLEFALKPLKEALDGLPELPYRTTVHTDQGFQYQHKQWQKTLKTHHTFQSMSRKATCLDNAAMESFFHLMKAEMMDEHFENPESLAQAMTEWIEFYNNRRIRTKLKGKSPVQYRELANQLVA
complement(1162784..1162963)       hypothetical protein; NUU04_05980                                                    N/A                 LimosilactobacillusfermentumMAKHKHKKVTKPTTAQIQARHDKDELKQLKQENKMLRIENEFLKKLDALDHEKSTHAKP
complement(1163008..1163295)       helix-turn-helix domain containing protein; NUU04_05985                              N/A                 LimosilactobacillusfermentumMTKFNLELRISIVTQYLTGISSIQLARKYHIANNETILLWVYRFNRFGIAGLKPRPMNLEYSSEFKIEVLNWKQQHYTSISLHQVLSGNGKESLI
1163475..1164695                   PHAGE_Paenib_Vegas_NC_028767: transposase; NUU04_05990; phage(gi971741608)           2.06e-115           LimosilactobacillusfermentumMPKVELNLEDDELKELLLGDRDKAMQSIMAKILNEILKSEATEQIKAKAYERSDKRTNSRNGYRVRQLTTRVGSLELHVPKLRHGNFSTQLFKRYQRSEQAFDLALMEMVIQGVSTRKVAEITKKLCGTTFSKSTISALCNNLDDQVLDFNRRPLTQKYAFVYADAILFKVHRGHVVTSNSLLVAIGIDPSGRREVLGFDIGDSESKAAWMDFFSELKQRGLTNVDMFVSDAHCGLKDAITTQFQGSLWQRCQFHFSNDCTSILALKDRKEVANRLKDLFNAPTYDQAVERRDQLVKDWQTEFPKVVKKLENSFDELMVIYQLPEELRKRLRTNNTIERVNQEIRRRDRVIRIFPNDLSVLRLMGALLIEQNEKWAAGPRYLNMTVYHGIEKDDNSEEAGMLKLVK
complement(1164710..1165303)       DUF3737 family protein; NUU04_05995                                                  N/A                 LimosilactobacillusfermentumMCQLDRVQYRERPLFHLQNAEVRRVIFPDGESLLKEGRDLKLDQVLFKYKYPLWNDENVTVTDSLFEEMGRSGIWYTNNITIKDTTLQAPKLFRRSKGIKLTNVHFAHVEETMWTCEDIELTNVQVNGDYFGMNSKHIVADHLDLVGNYAFDGAEDVLVTNSRLMSKDCFWNTKRVTVKDSILSGEYLGQVQNVGVN
complement(1165317..1166162)       PHAGE_Bacter_Diva_NC_028788: transposase; NUU04_06000; phage(gi971743567)            1.80e-25            LimosilactobacillusfermentumMSQSGYKVSDLVKAAGVSRQAYYKWLTHEPTVHDIQDQEILKLVKQLEAQHKHCVGYDKMTRLIKQERLSYTVNKKRVMRIMKEHSIKADYRQPKRKRVQEQETYVAQNTLNRQFEQAAANQVWVTDTTEIAYNIRKYKVRLHVVLDLYGQYPLSWIITPTETSTGAIKVFQMAKQKAGGLAPLIHTDRGAAYTSKAFNHYLASNNSQHSYSAPGTPADNAVMEHWSDFKSIWLAHSPQPQTFEDLEQLVTEGIDYFTHSFISGKRNDLTAAEYRFGKAN
complement(1166159..1166773)       PHAGE_Bacter_Diva_NC_028788: transposase; NUU04_06005; phage(gi971743568)            2.19e-37            LimosilactobacillusfermentumMRTSSLNRWIKQFLTAGLAGLIRPEHNHRYTLQTKRSAVKAYLSGTLSGQAILNRYQISSLSQLHQWIVRYNSGQLSVAYATRKRARKVGRKVTFEEKRQITQWTIDHEYNYQAAAEKFNVSYQRVYSWVRKYQRTHDLESLQDNRGRHKGKTPTNEVERLRQEVRQLKAKAKEREVQIAFAKKLVEIHNREVERPDDIKRFRK
1167101..1168024                   PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; NUU04_06010; phage(gi588498272)     8.30e-66            LimosilactobacillusfermentumMSTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAGLAQTDFERKVSQRGRKSSLTKGLKHLIEEKIQVQKWSPEQVAHVVGIAYKTVYNWIDQGWLDVQLPDLPDHGIRRHRAKEKRGTFSHGRSIEERPHKVETRQEFGHFEADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQNKIKTLTVDHGKEFANYQTIERQTGTQVYFAHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDYQLVQINWYLNSRPLKCLNWHTPIEIFLLNLRH
complement(1168151..1168771)       PHAGE_Bacill_phIS3501_NC_019502: site-specific phage integrase; NUU04_06015; phage(gi422934319)     1.13e-24            LimosilactobacillusfermentumMKQLVLPIKDSQMLSQVLATLRDNFKFGQRNYTIFQVGKATLLRVSDVISLKKADVFDEEGEVRRNAFIVDKKTHKQNTLYLKPVEKDLKRYARWLTNYQLANPDCQVYTSEWLFPSFQRPERHITEHQYYKVMHKVGDLLGLNYLGTHTMRKTGAYRVYVQSNYNIGLVMKLLNHSSEAMTLAYLGLDQQSREDLLDQIDFGGLG
complement(1169068..1169847)       PHAGE_Mycoba_Phantastic_NC_024148: esterase/lipase; NUU04_06020; phage(gi640885329)     5.56e-11            LimosilactobacillusfermentumMELRTDDGLRLNYQVVGHGQSLVFIHGFGGYQQVWTRQVEYFTSHGYQVVTYDQRNHGASQFDPNLDSIHRLSRDLQELLALPTINHPILIGHSMGASVIYDFLTWYPNYPLAGVVAVDQSPRLINSPSWPYGFIKVTRANYQQGLLAPGVSETLHGIDQHVYDQLRVVKQQFPFGRAANRELVTDVARQDFRPTLATTKVPTLLVTANQSPFYQSAYATVAKDNPMVHHVSIDQSGHVVMAEQVAVFNQVVSQFLHQL
complement(1169831..1171251)       triphosphoribosyl-dephospho-CoA synthase CitG; NUU04_06025                           N/A                 LimosilactobacillusfermentumMASKVFEGTDVEIPAVLANRDRRVSYENTLPRWWSPASISRGQSRTALPSKPSLPPAHALRTSGRADNPLKLRLLGRLLQPVRNVSTYYIALATSRRGPSTSKSANQPTGSLTSMCSPTAGNPTHFRGGILIFQFGPVSAGARLRNVDGHGVTALKNYKPGWPNLTKQPRLTNGRLLLSNWRTKRRQCTKSSPGPNQDWLTQLSTAPTQIWMSSPLFKAPPVYALTLSRRPRPASISRPDNLRPFSLTNFASSVSGPTRRCSKQQRGLILTRAPFFRWAFPEPWRRRGVSCQLPSTFNGLSKRCWLTYWRPTMASMANSPPGSASTPTGKPGSGGKRRAVSQPFSSMACRPGGLTGGTKMTASPPSRLPATPMTRPLSGPGTQPSHGRTNSTVSLSSVVQRNKVVNSWSTRRTFLTATSVWVGRPTSLPPSFWPVWKGIMIMELRTGA
complement(1171390..1171713)       citrate lyase subunit alpha; NUU04_06030                                             N/A                 LimosilactobacillusfermentumKKTIISAPLTQGRIATVVPSVNSVSTPGASVDVLVTEVGIAINPARQDLVDAFSKVPSLPIVSIEELQKRAEATVGKPAPVEYTDRVVGLVEYRDGSLIDAIKQVKD
complement(1171847..1172014)       PHAGE_Strept_YMC_2011_NC_018285: putative minor tail protein; NUU04_06035; phage(gi399498731)     2.75e-07            LimosilactobacillusfermentumMAKVQNEMATRITVDTVQAANSMQAMHQAISANTNAWKAIKNQPFCDRILSSTGE
1172260..1172547                   PROPHAGE_Xantho_33913: ISxac3 transposase; NUU04_06040; phage(gi21231087)            2.40e-06            LimosilactobacillusfermentumMTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
1172571..1172873                   PHAGE_Bacter_Diva_NC_028788: transposase-like protein; NUU04_06045; phage(gi971743572)     1.23e-05            LimosilactobacillusfermentumMDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELGIHAVYLTAWS
1186197..1186209                   attR                                                                                 N/A                 TTTAGCAGTTCCT

#### region 8 ####
complement(1258101..1258559)       PHAGE_Clostr_phiCDHM19_NC_028996: putative regulatory protein; NUU04_06485; phage(gi971763911)     1.18e-07            LimosilactobacillusfermentumMNEQMDISPAEWRVMRVAWTLGQVTSAQVIDALKQRVDWKPTTIKTLLWRLVKKGVLKTTQEGRAFIYTPLIPEQNTMDQAVDQLFDAMCQMRAGKTIRHLVERSTMSVADLQELQAILAEKIKTAPDAVPCDCVPGMIDAECCTVQENGRA
1259071..1259096                   attL                                                                                 N/A                 GCACTAGGTCTAATGCCCTACTTAGG
complement(1259179..1259868)       PHAGE_Lactob_LF1_NC_019486: phage integrase; NUU04_06490; phage(gi418489411)         2.32e-69            LimosilactobacillusfermentumMVSFALDDEIIRKDFTSNIQVIANKDRERKVEYLNQKETAVLMDAVKADLDPDHPVKYMILTALLTGIRKSEIQALTWNNLDFLHSTININKSWDEIEKAFKATKTLSSRRVIPVNRELLKMLASLKANNSTMVFYSPEYDQVPTGHALNKALRLIMHQQAIVKQGFHFHSLRHVHVAYLLGKGVDVYAISKRLGHSDITITLKAYSYLIDEYKAQNDDLIVKKLQELI
1260091..1260378                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; NUU04_06495; phage(gi48697273)     5.72e-06            LimosilactobacillusfermentumMTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
1260402..1261019                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_06500; phage(gi48697274)     3.35e-28            LimosilactobacillusfermentumMDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELGIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHNGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLIEKTKHSRHISKPLIMHSDRGSQFTSEAYNQV
1261100..1261351                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; NUU04_06505; phage(gi48697273)     2.74e-52            LimosilactobacillusfermentumMPTRYNKEFKQNIINLYKQGESAAQLAREYGIGYSTVHKWIQGQAKTQSGKSPDEIKAMEKRLASLSEENEILKKALGFLAQK
1261369..1262247                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_06510; phage(gi48697274)     0.0                 LimosilactobacillusfermentumMHQESHHHQVTKMCRILGVSRAQYYRYRSPKPSKRRAEDVDLKQRILRIFAEFKQRYGVMKIHHELNLELQPLQRRCSPRRISRLMKELDIHSVTVNKWKAASASKTKVEQRPNLLKQDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMDTDLVLKTLESAVKNRTITGDLIIHTDLGSQYTSYDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFENYETAAAVLFEYVHAFYNRKRIHSSLGYQTPLQVEIATLTSQMAA
complement(1262624..1263514)       PfkB family carbohydrate kinase; NUU04_06515                                         N/A                 LimosilactobacillusfermentumMSKTLVIGAAFVDVLMDVPKLPTTGEDISGHLRANIVGGSAFNVYGAIKYTGQDADLFVPVGEGQYADLVSEDMAKMGIRPLLKVNGADNGWDISFVEPDGERSFLTVNGIEQLWQPDWFENIDISNYDSFYISGYEMEDDKAAGVILDALDKRNSDSQVLFDASPRIEYISQKTLQRLYDNHVMIHCNEDETRYLFPGVSSLEMKCQEIFVKTHAPIVLTLGEEGAYLCAGKHHSEMVRSAKVKVVNTLGAGDTFCGGFLAGLSQNMSLPEAVQQGNELAALVVGQDSGTLLNKQ
complement(1263515..1264873)       cytosine permease; NUU04_06520                                                       N/A                 LimosilactobacillusfermentumMDDNIIKIPDSEKTLTAGKLFYNWFAANIGIMGFVFGAMIVSYHLSFFQAIIASIVGALSFAIPGWVAMIGQKEGVTTFKLSRAAYGTHGNKIPNAIAWFNMVGWLAVNVITGTLLLVSLFSIINVKKSSVTTAVALVIFGGLVVLSGLLKEDTLAKIQTWLSWIFGILTVLILVLFLLKAKWQEAFSLPSGSWITGVLPAVSIVAAGSGISWSMAAADWGAYVTKKTKPSATFWNTTMGGAVPLFVLMAGGVLLSTIEPSLATTGDPFGVMYSALPTWIGPIYFLVAAGGLIPQCIISFRSARINLATIGINVTQRTSLMIHGAIILAIPIYVLFISGNFLSNFELFLNFLGICLASWVAIFLCDSVMFRSQGYDVALLENDSKTHFNWRGIISWILATTTGFLFTNNAIWNGPFAHGIFRNNSLGVFVSAIISIICMLLWKVAVPNKKVA
complement(1264879..1265889)       PHAGE_Serrat_BF_NC_041917: hypothetical protein; NUU04_06525; phage(gi100349)        6.07e-11            LimosilactobacillusfermentumMRSKDKILGVLYGQAIGDAIGMPSELWPVENIRDQFGGKITTFLDGPDNNDIAKNFKKGQYTDDTNQALAILDGLIENNWQPNSEILVKHIMAWAESVGAWENNILGPSSKAALSAIKAGQDPRPITDQALTNGAGMRISPIGALFEPNQLPKLVQMVFDITQITHSSDVSISGASMIAGAVTASMADQNWDDIIDFALRANDAGFKLGAPTWAAKTHDRLQLGIEIAHKYKDDDDKFSQHIYDLIGTGTMISESIPAAVSIAYYCRDVQKCALMCANLGGDTDTIGAMATAICGAKNGQSSIPVEWVNLIDQQNPEHNFNEYADKILQFHINQMG
1267062..1267087                   attR                                                                                 N/A                 GCACTAGGTCTAATGCCCTACTTAGG

#### region 9 ####
complement(1657938..1658924)       PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; NUU04_08590; phage(gi588498272)     2.34e-58            LimosilactobacillusfermentumMSYKHLTIKEREILMFLRAKGLSIRAVALRLGRNPSTISRELKRCAGNYSPSKADNDYHQKRQNCHKKRLLDSHPQLRRQIVHYILDLHWSPEQITARFNKEHQWCVSYNTIYRHIYQHNLGEKYSSRGDTGIQRHLRHKHRTRHSKNTRRHREVQTDYISIHERPGFINQRQRIGDWEIDTVIGRTGHSILLTVVDRLSRLTLIKKVVQKDSQEINKGLVELLGAIPKEFVHSITPDHGTEFLHLDEISERLGVTVYWPDPYSPEQRGTNENTNGLIREYFPKRTDIDNYTEQDVEHCQKQLNQRPRKVLNYETPYEVFFDKPLHLV
complement(1659483..1660733)       PHAGE_Clostr_c_st_NC_007581: putative IS transposase (OrfB); NUU04_08595; phage(gi80159731)     1.23e-57            LimosilactobacillusfermentumMKSMAQMKYHYGLKVRIYPSDRQKKIIKINSDASRFIYNEMVAINKELWRLKQVKLPIDTIQNRIEQLELRQSAKQMSNHFQFLEDKRIDSLTKANAIQNYHKAWNAFRKVHTAGVPKFHRKSYVWRYQTNCQYLKQKAAYLTNGTVHFEDSKHVIVPKLGRLRVKGSHQRVLARSAETRIGTVTIVKDASGRFFLSMQLASDTPFVNWPQNTGKQIGIDLNTENFLTTSNGDTVANPRYYRIIKGRLAKAQRILSRRARRAKQEHRPLRTSKNYQKQRLLVAKLHAQVFERRRDFLHNVSTTLIKNHDFVAAEELRSKNMLKNHALAMSIADVGWRTFLGMLAYKAELYHRQFLTVNPKNTTQACHECGFVMGTAGTEKLILADREWTCPKCHAHHVRDHNAAQNILTKGIIKLA
1660812..1661264                   PHAGE_Sulfol_SMV1_NC_023585: IS200 OrfA family protein; NUU04_08600; phage(gi589287087)     7.84e-24            LimosilactobacillusfermentumMSKDKIEDAIYTRRYIYNFHYHLIWVTKYRNPTFTSEALVNEMKEILTTVAADNEIVIEHMEVMPDHVHVLISFPPSKAPTSAIKALKGRSAFIFLKRHPEIRQSQYWGGYLWSPSYYMSTLGNMSKEVVEQYINNQKYNEIKKRPKGRK
complement(1661616..1662314)       hypothetical protein; NUU04_08605                                                    N/A                 LimosilactobacillusfermentumMEKLNKQYLKQMSHYSWLTLIAIISILGVSAVFYLLAILFSGHIEVEAGSISIDGGNLVSMLAFLSDMMVLVLVFFSICTPYQIFKEAIANGVSRWTNWLAHHLMVITVLVVAWLMNALIELLQSGTVTWSQQWAIIISMLIGVTTAGALGNLYGLMSMRWKIILTIALLASFFVLCWLAVRLVLLVTPERAVMMIQSINHPIVWNGLGLIWVALMVGIDYLCALHMQLRRD
complement(1662327..1663187)       PHAGE_Bacill_G_NC_023719: gp245; NUU04_08610; phage(gi593777701)                     6.93e-11            LimosilactobacillusfermentumMTVNELMVNHVTKRYRRHTVIDEVSFNLAPAKIYGLLGRNGAGKSTLLNIITNRIFPTSGMVAMGPQNVNNNDEELGKIYLMSESNMYPKTTRVKRMLSDADRFYGKFDFANARRMLGQFGINEKDRFSNLSTGQKTAVKITIALNVNAQYVLLDEPTLGLDVNYRETFYRELLRTYSEKPRTFVLSTHLISEVQQLVEDVLILHEGKIIVNEPVEELLGRAFLVSGPAQLVDEYTAGQTTTDSQTIGNLKETAVIGELDALRPIPDQVQIKHLDLQRAFTALTNH
complement(1663174..1663551)       PHAGE_Strept_TG1_NC_018853: putative regulator, GntR family; NUU04_08615; phage(gi410491962)     1.36e-07            LimosilactobacillusfermentumMNFEFDQDSPLYQQIANQLAEMIFTGVYQAGDQVPSTTQLSASLNINPATVLKGMNQLVALGLLEKRRGRGMFVTPGAQEQLATKHRDDFYRNYVVAMVAEAKKLGIKEEHLQELIKRGYQDDGQ
complement(1663661..1664593)       PHAGE_Entero_phi92_NC_023693: Phi92_gp067; NUU04_08620; phage(gi726647000)           2.06e-67            LimosilactobacillusfermentumMNILVTGGAGFIGSHFLRYQLSHYPTDRVVNLDCLTYAGNLANVADLASTPRYHFIQGDIRDAATVSEVLATHQIDVVVNFAAESHVDRSIEDPAPFVSTNVVGVQVLLDACRRAQVRLVQVSTDEVYGSIVAGRVDEEAPLQPSSPYAATKASADLLAMAAHHTFGQDVVITRSANNYGPNQHPEKLVPMIITNARQQRPLTIQGAGDDIRDWLYVVDNCQAIDLVMRKGVEGEVYNIGGFERRTVLEVVASLQALLGFPDSQVVHVAERLGHDHRYAVDDTKLRRTLGWRPSTSLAAGLTQTVRALQH
complement(1664620..1666365)       hypothetical protein; NUU04_08625                                                    N/A                 LimosilactobacillusfermentumMKKIEKYKYRSDLVAIFIFLVVTFTMTYPLWHSHQLFIANDWSFHVSRVEEIYDNLKDGHLFTYIATHTFQKTGVANFLFYPTIFLYPWALLRFIFSPVTAFYGWYALINFCTLVIAYLCAKKVSNSSIKAILASLLYTLMPYHMFVGTGVFGEFVAMTFIPMVILGGYELFFADDHRWQLLAIGLALVSYCHILSTLLCIEILSILFIISLFAKKWSNIDRIKALLKSVVLTISLVAMMVGPFVSDYIGQKISSTDSEINFNMILKLKDFIFSSFSGSYGQNLGFVLVIALLTGYIYFNNRFVITVWLLGSTLALVTTDFFPWEKLQNIVPALGVIQFPYRYLSYAGLFLALIASEAIGSSILKLEKRKQLVAMVAVLVVAAVYPLSVLHTRDWRTDSSLDTISVKVQQSGPQGTPVAYKVNNQTYSEIFSHGVLYGEADYFPKQSWGGNSAAYYGIVINNPKLRSIIDSYAYIDGQKTKISKKSGPNKLEMSLNDVKGKKINLPVVAYRNTYLQVNGKNVNYQKSSRGTVQFTSQSKKVNIVVGFKPSMIMIIGYIVSSLGWLFVLLMLIRSLRSKIKQ
complement(1666411..1667319)       glycosyltransferase family 2 protein; NUU04_08630                                    N/A                 LimosilactobacillusfermentumMNKICAIVVTYNRKILLKQSLQALLDQTVTDFDILVVDNASTDNTREYIDDLLQEERIDYVNTGANLGGSGGFNHGLKVACKRGYQYVWMMDDDTMPTPTALEKILEADKILGGNYGYLASEVLFTDGQPCKMNGQKVLKKWFDESQYLKNGILRTTRATFVSFFVRTAVVEKVGLSYKEFFIWGDDMEYSNRISKQFPCYMVAQSIVVHHTKNNDGSSIAKDDGSRLWQYKFAYRNECVIARDDGLYGRCYQFAKVNWNILKVIGSHKPLKLKKIWILISASIRGIFFRPKIEYIKLDSDK
complement(1667337..1668326)       PHAGE_Lactob_SAC12B_NC_048754: portal protein; NUU04_08635; phage(gi100153)          5.02e-13            LimosilactobacillusfermentumMDNIKFLKEQMGFKELWLDYGWKDGFWWHHNLWDWINTRIHKYQLSRSVLPKFFKEHPDIDNVVIQYPLYSNKLIKQITDSVHQNSHAKLYFIIHDAEMIRLYADEPKRAQGELDSFNLSDGIIGHNAKMNKFLKEQGVKVPLVDLGIFDYDNPQPLQEYKGYDKSVCYAGNLIDAEFLQDVHPTNRFDLFGPNPAESYNEGLNYKGQFSPTDLPAHMDENFGLVWHGTSVDTCDGVFGRYLKWNNPHKTSLYLSSGLPVIIWDQAALADFVLENGVGITISSLNDLNDKLDALTEEEYRQMHDNVQKVANQMRTGYYITHAMEKMINN

#### region 10 ####
1665873..1665885                   attL                                                                                 N/A                 TAACCATCGGGAT
complement(1671776..1672753)       PHAGE_Entero_SfV_NC_003444: bactoprenol glucosyltransferase; NUU04_08650; phage(gi19549012)     6.19e-64            LimosilactobacillusfermentumMLKTLTIVVPCYNEEEVLPETVKEIGTIIEDLIAQAKISTKSKILFVNDGSKDRTWELISEYSEKYSYVSGIKFTRNYGHQNALLAGMTVAVKYSDMIITIDADLQDDVNAIYQMVDKYLEGIDVVYGVRNSRETDSFFKRRTALAYYGLMKRLGVNLVPDSADYRLLSKRATEALLQYKERNLFLRGMVPLVGYPSAKVYYPRKERFAGKSKYPLGKMLHFAFDGISSFSIAPIQLILILGILTTSISIIMMIYVLVEKILGHALTGWASLMISIWLLGGIQLISVSVIGEYVGKIFTEVKHRPRFNIETEDYTEKMAKDKNGY
complement(1672842..1673951)       AI-2E family transporter; NUU04_08655                                                N/A                 LimosilactobacillusfermentumMPKSYQKALFWSFELLIIASLIWVCTQINFVFTPLLVFVSVVITPLIISLFLYYMLNPLFRLLMKIKVYKWHMKRGIASLVVVIGLVLIVAGGISALIPSVLNELNQVIHWLPQAAKEIQKMIQEISEHPWVRKLHLSTYYGQINDQVSKYVRQIVTGLTSSAGTIIGTITSTVIVAITVPVMLFYMFKDGNRLVPSVQKLFPESSQDEVGELLRKMSKTLSSYISGQAIECLFVAIATSIGYLIIGQPLAVVLGVVAGIANMIPYVGPYIGITPSLMVSIAVVPEKIIWVIVVVVIVQQIDGNIIYPNIIGKTLQIHPLTIIMLLLAAGNIAGIPGMILCIPCYAVVKTVVTYLISIYNLRKRGETNG
complement(1673951..1674883)       PHAGE_Oenoco_phiS11_NC_023571: Bactoprenol glucosyl transferase; NUU04_08660; phage(gi589286660)     1.87e-101           LimosilactobacillusfermentumMPKLSIVVPCYNEQEALPLFYPAVEEVVQRIDGLKTEYWLVDDGSADQTLAEMRKLHSIDPERVHYLTFSRNFGKESALYAGLEAATGDYVVVMDADLQDPPSFLPQMYSILQEGEYDCVGTRRTDRKGEAKIKSFLSDQFYKVINRVSQTNIVPGARDFRMMTRQMVDAILSMNEYSRFSKGIFSWVGFKTKYLEYKNVERVAGTTDWSTWKLFKYAMDGIADFSQAPLSLAVWLGTTSFIISIIGLIFVVIRRLIEPTSSAFGWASMVCIILLLGGLQLLCIGIVGKYIGRIYMQVKNRPIYIIKEKK
complement(1674973..1675536)       hypothetical protein; NUU04_08665                                                    N/A                 LimosilactobacillusfermentumMKANKLLTSIVAGAMLLSLAACSSNKSASGSDTTDSVSASSKAASKKSSTTKKQQVKTVSDDSSSSSSKSSSSAADANSSTSSSSASRGAAAATASNSSSSNGSSSSSSASTATLTQTQALDLLKERLGANLNNAGTSGQSMPVQPSATDVDSFTATQTGTNSWQFTGTVNGKTYTYNVSPTSITEN
complement(1675679..1677274)       PHAGE_Strept_FlowerPower_NC_048706: hypothetical protein; NUU04_08670; phage(gi100011)     1.93e-14            LimosilactobacillusfermentumMESKKHYKLYKSGKQWKTLAITAAVAIAGVVSFDNATANADVASSAIATTEVSQTTNDSSAVQSDATSATVVVASTNSTVVSSTASAASSETVVAPVSAESVSVSAVASSATSSASSVAQSTAVVATEASSAISATSAVSSSVATTTSEATVSTTSSMNDSNLSDATSTQDSAASSAAEIRAVAAAVSSTKNGWVNENGMYTYYTNGKVASGESYAYLPTINGTGHNWYLVKDGVVQSGVQQWYGSYYYFNPTNYLKLDHQDYVQSQWGSWYMVGSDGIVKSGVQKWYGKYYYFDPTTYLKLDHQDYVRSQWGDWYMVGSDGIVQSGVQKWYGKYYYFDPTTYLKLDHQDYVRSQWGDWYMVGSDGVVQSGLVSWKGSTYYFDSSTYLKVTNKTFTVGNTTYKADGNGVVTVVNDVNAKVNKALGEIGVPYVWGGNSPSVGFDCSGLVQWAYGLSSSYRTTYQQQALGTHVYSNVSSAPKGALLFFGSDSAPYHVAISLGDGSYVHAPTVGENVKIGYQKYFTPSYYIVLS
1677613..1677625                   attR                                                                                 N/A                 TAACCATCGGGAT
complement(1677769..1678332)       PHAGE_Lactob_phiAT3_NC_005893: putative integrase; NUU04_08675; phage(gi48697280)     8.04e-32            LimosilactobacillusfermentumMDAVKADLGPDHPVRYTILTALLTGMRKSEIQALTWNDLDFLHSTININKSWDEIEKAFKPTKTLSSRRVIPVNRELLKMLASLKANNSTMVFYSPEYDQVPTGNALNKALRLIMHQQAIAKQGFHFHSLRHVHVAYLLGQGVDVYAISKRLGHSDITITLKTYSYLIDEYKAQNDDLIVKKLQELI
1678594..1678845                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; NUU04_08680; phage(gi48697273)     3.03e-52            LimosilactobacillusfermentumMPTRYDKEFKQNIINLYKQGESAAQLAREYGIGYSTVHKWIQGQAKTQSGKSPDEIKAMEKRLASLSEENAILKKALGFLAQK
1679329..1680252                   PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; NUU04_08685; phage(gi588498272)     3.31e-64            LimosilactobacillusfermentumMSTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAELAQTDFERKVSQRGRKSSLTKNLKHLIEEKIQVQKWSPEQVAHVVGIAYKTVYNWIDQGWLDIQLPNLPDHGIRRHRAKEKRGTFNHGRSIEERPHKVETRQEFGHFEADTVLFGKRKGQAVATFVERKSRLTIVKRLHGRDSQAMTQAVLELASQLQDKLKTLTVDHGKEFANYQTIEQLTGTQVYLAHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDYQLVQINWYLNSRPLKCLNWHTPIEIFLLNLRH

#### region 11 ####
complement(1711150..1712775)       PHAGE_Bacill_G_NC_023719: gp245; NUU04_08835; phage(gi593777701)                     1.40e-11            LimosilactobacillusfermentumMITITDLSLNLSGRTLYRDVNLKFTPGNCYGVIGANGAGKSTFLKLLEGKMSPTTGTISIGPNERMTSLNQDHFAFDDCTVMDTVIQGHAKLYQIMQEKDALYAKPDFSDEDGVKVAELEAEFAEMDGWNAEANASQLLQSLGIPESLHDTLMGELAESDKVKVLLAQALFDSPDILLLDEPTNGLDVHTIAWLEDFLAGYDKIVIVVSHDRHFLNQVCTQMCDVDFQKIKLYVGNYDFWYESSQLAAQLAANQNAKKEEKIKELQEFIARFSANASKHKQATSRKKQLEKITLEDIQPSMRKYPYIKFEQDRPLGNDLLKVEHISHTVDGEKLLNDVSFLIRPGEKVAFLSRNDMATTVLMQIIAGEITPDEGTVTWGQTTSTNYMSRDLNAAFDNDELTIIDWLRQFATKEENDNTFLRGFLGKMLFSGEEIDKQIKVLSGGEKVRCLLSKMMLQHANVLLMDDPTNHLDLESITALNDAMESFPGSILFTSHDHEFIQTIADHLIEVGPNGFVSRADTTYDDFLAHPTAQEQVAALYE
complement(1713043..1713936)       PHAGE_Lactob_Iacchus_NC_048084: hypothetical protein; NUU04_08840; phage(gi100091)     1.32e-98            LimosilactobacillusfermentumGQNKFPHFKSRKYAQSYNSKCVNHNIKVIDNHHIKLPKLGVVYFRSGRLPQGKIKNVTVRLTVANQYYITVLTECENQTLAKTGKRVGGDLGLKSLLNLSDGYKEPIHHFEDKYRKKLHHWEKLRSRRYLLAKQAIAWDYHNKVLAPRQLDDFKNYQKARVMVAKYRQKIANQRLDQLQKFTTKLVKQYGIIVLEKLKIKGMLKNHKLARAITNASWSKLVSILQYKCDWYGKKLIQVNPAYTSQICINCGKNNHRLGLDKSEWLDVREWDCPNCGTRLDRDINAAQVILKKGLATQ
1714050..1715048                   PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; NUU04_08845; phage(gi588498272)     7.66e-64            LimosilactobacillusfermentumMSSYNHLTLKDRECILLGVTLKDTYQVIAQRVGCSKATVSREIKRNGGRKAYSAVKAQENYQGRRLKSRRPRLLTNLKLRDFILHCIVQRQWSPEQISGRLAHENSEWRISYNTIYRGIERDNLGIKRKSHGARGFARKLRHRGKTRKVKGTIKERRGRFNDVPSVHERPVSCENRSRFGHWEGDTIRGKTGRSALVTLVDRKSRYLLSQRVLKVNAKNVTQAMIDLLHTVTPKRVRTLTPDRGTEFAGYREVSQELSIPVYFPDPHAPQQRGTNENTNGLIREYFPKGTDLDQLTDQDIDKFVRDLNHRPRKVLGWKSPFEVFFGTKLRLI
complement(1715053..1715340)       PHAGE_Lactob_521B_NC_048752: minor tail protein; NUU04_08850; phage(gi100056)        7.29e-32            LimosilactobacillusfermentumMVLKAVKMRIYPNSEQRDRLMQTFGCARFVWNQMLNMQIERRKNNPDAKFVNAFGMNNLLKRLKEEYPWLKQAESTSLQSTNRNLADAFQRFFKGR
complement(1715340..1715738)       PHAGE_Bacill_Shbh1_NC_030925: head morphogenesis protein; NUU04_08855; phage(gi100068)     2.15e-37            LimosilactobacillusfermentumMELDRNQHSVYLLNYHLVMVVKYRRKVINDEISEYLKHRFVVVGQSYGINLQEWNHDIDHVHVLFRATPHTEMAKFLNAYKSSSSRMVKKLFPEIKRQLWKSAFWTQSYCLISTGGAPLEVVKKYIESQGRK
complement(1715920..1716387)       PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; NUU04_08860; phage(gi100019)     2.96e-23            LimosilactobacillusfermentumMKYEKTKEVLNQLVADLSQLVMVVHQTHWYMRGENFLKLHPLMDDWMDDLNDQLDEISERLIALDGSPYSTLKEMAEHTKIPDEPGNWNKSTPERFEVLAKDYRYLADLYQHGIEISDDEKDFSTQDIFIGFKTATEKRLWMIQAELGKAPERDL

#### region 12 ####
1731896..1732183                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; NUU04_08955; phage(gi48697273)     1.81e-05            LimosilactobacillusfermentumMTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVFKKSIGILSK
1732207..1733085                   PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_08960; phage(gi48697274)     3.79e-47            LimosilactobacillusfermentumMDVQHALESHPSINSMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELDIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVISLIEKTKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCRFKSPKQLEDEYQTQIQNLVVA
1733401..1733862                   hypothetical protein; NUU04_08965                                                    N/A                 LimosilactobacillusfermentumMQSVSSTTIASIEKNEMRLTKAYPKSNNSSTTASSSSSNSQTQHRKLTANEIGNLYVKQLRIHHYLNNHYVEIIVLRNTSTGGYTFTDPSHARIKIYILQVITNNKTNLQSILVNRPQDATLMNPLDSERAQSAFDFEASIFDAVYSNNKRIN
1733883..1734647                   zinc ribbon domain-containing protein; NUU04_08970                                   N/A                 LimosilactobacillusfermentumMICNHCGTENDATAKFCIYCGHALIGPESAPKQEAYSTNQCPNCGTENTPSAKYCVSCGHALTPSKHVQDSQTTTTQASTKSRSTARNTSSPNTSSHSYFLLKLVIVVAILIFAIPKGYAYIQQAMIPKGSADYDTIIDHVTKHDGQDIIILQMKDLLNQATVNESPSVFIEKNKDTGRYVFPIKIAKKKTYCYVVKVIEQFYADGSYKYSYVAVSLDKNKKNKYENKILDPNHFEKEFHQKDAYGYTADELPN
complement(1734854..1735699)       PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfB; NUU04_08975; phage(gi24373866)       4.26e-28            LimosilactobacillusfermentumMSQSGYKVSDLVKAAGVSRQAYYKWLTHEPTVHDIQDQEILKLVKQLEAQHKHCVGYDKMTRLIKQERLSYTVNKKRVMRIMKEHSIKADYRQPKRKRVQERETYEAQNTLNRQFEQAAANQVWVTDTTEIAYNIRKYKVRLHAVLDLYGQYPLSWIITPTETSTGAIKVFQMAKQKAGGLAPLIHTDRGAAYTSKAFNHYLASNNSQHSYSAPGTPADNAVMEHWWADFKSIWLAHSPQPQTFEDLEQLVTEGINYFTHSFISGKRNDLTAAEYRFGKAN
complement(1735696..1736310)       PHAGE_Bacter_Diva_NC_028788: transposase; NUU04_08980; phage(gi971743568)            7.55e-37            LimosilactobacillusfermentumMRTSSLNRWIKQFLTAGLAGLIRPEHNHRYTLQTKRSAVKAYLSGTLSGQAILNRYQIRSLSQLHQWIVRYNSGQLSVAYATRKRARKVGRKVTFEEKRQITQWTIDHEYNYQAAAKKFNVSYQRVYSWVRKYQRTHDWESLQDNRGRHKGKTPTNEVERLRQEVRQLKAKAKEREVQIAFAKKLVEIHNREVERPDDIKRFRK
complement(1736602..1736799)       hypothetical protein; NUU04_08985                                                    N/A                 LimosilactobacillusfermentumPADNAVMEHWWADFKSIWLEHRPKAQTLAELQEQVRAGIMYFTNQFISAKRNDQTVAEYYHDLVG
complement(1736849..1737742)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_08990; phage(gi48697274)     1.09e-42            LimosilactobacillusfermentumMDVQHALESHPSINGMCNYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELGIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLNVIPLIEKTKHSRHISKPLIMHSDRGSFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTQIQNLVVA
complement(1737766..1738053)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; NUU04_08995; phage(gi48697273)     5.72e-06            LimosilactobacillusfermentumMTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
complement(1738368..1739474)       PrsW family glutamic-type intramembrane protease; NUU04_09000                        N/A                 LimosilactobacillusfermentumMTEYIYCTQCGAKNAATNNFCTACGQSLVSSSVHHDQETRQTQAPNTSFIDNTTKQLNRWTGEDKSVSLNVASMFGGIFDHHTQQDAEEIFIAGTFKTTPSLAEVSDAPVRPWLFSRILMLFVVVIGLFLSALMFFQGEKTYPGLVFISSCAIPFSLLILFFEINVFKNISIYVTMKVFLLGGAFSLLTTLFLYSIVGASNFSIVEAILIGLVEETGKLIIVIYYVEHYNLSHIFNGMLIGAAVGAGFAAFENAGYAQDYGISVLLIRSIGSLGTHTLWCAILGAALVIVKRDHHFDSSMLVDPHFINFFIFVVTLHAVWDMNLPLTSVKVTGLIVMAWIAILVLINAGLREVGELQRGKVKIPKSEL
complement(1739474..1739791)       hypothetical protein; NUU04_09005                                                    N/A                 LimosilactobacillusfermentumMNYCTQCGNQNRAHAKFRVTCGHQLTTPSVTIVTQQKSTRLLTIGIISVLLALIVTPPLFGTIAIVLGSIVARHHPYQGYGLITAAILTLIIGSAVGIFMIGWWI
complement(1740055..1740933)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_09010; phage(gi48697274)     0.0                 LimosilactobacillusfermentumMHQESHHHQVTKMCRILGVSRAQYYRYRSPKPSKRRAEDAGLKQRILRIFAEFKQRYGVMKIHHELNLELQPLQLRRSPRRIYRLMKELDIHSVTVNKWKAALAYKTKVEQRPNLLKQDFSTTGLNQKWTADMTYIQTKRNGWCYLSTIMDLHSRRIIGYSFSKKMDTDLVLKTLESAVKNRTITGDLIIHTDLGSQYTSDDYNQRLTELHIRHSYSRKGCPYDNAPMESFHASLKKECVYPVPVFEDYETAAAVLFEYVHAFYNRKRIHSSLGYQTPLQFEIATLTSQMAA
complement(1740951..1741202)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; NUU04_09015; phage(gi48697273)     6.41e-52            LimosilactobacillusfermentumMPTRYDKEFKQNIINLYNQGESAAQLAREYGIGYSTVHKWIQGQAKTQSGKSPDEIKAMEKRLASLSEENEILKKSLGFLAQK

#### region 13 ####
1741428..1741439                   attL                                                                                 N/A                 TAAAATATTTTG
complement(1747003..1747458)       PHAGE_Lactob_CL1_NC_028888: transposase; NUU04_09055; phage(gi971752663)             3.66e-44            LimosilactobacillusfermentumMTKEKIKDAIYTRRYIYNFHYHLIWVTKYRNQTFTTEVLSNEMKAILQQVADDNDIVIEKMEVMPDHINMLISFPPSKAPASAIKALKGRSAYIFLQNHPEIRCSQYWGGHLWSPSYYMSTLGNMSKEVVEKYINDQKYTETNKKPHKGAQ
1747532..1748782                   PHAGE_Lactob_CL1_NC_028888: transposase; NUU04_09060; phage(gi971752662)             2.95e-60            LimosilactobacillusfermentumMKSMAKMKYHYGLKMRCYPSDQQKQLIKINSDASRFIYNEMVAINKELMQLRRVKLPIDIVQDRIKQLTMRQNAKQMSNHYQFLEDKRIDSLTKANAIQNYRKAWNAFRKVHATGVPKFHRKSYHWRYQTNCQYPGQKTALLTNGTVCFLDNSHVKVPKIGLLRVAGSQARLLKRICETRIGTVTLTKDSADRFFLSMQLASDESFVKVSKATHGHVGIDLNTDNFLTDSEGNIVPNPRYYRTIKGKLAKEQRILSRRQQRAKKEHRSLRDSKNYQKQRLLVAKLHAKVMNQRHNFLQQISTALIKNHDLVVAEELRSKNLLKNHALALSISDVGWRTFLGMLAYKAKLYGRQFITINPRNTTQTCRDCGFVMGTNGTDKLTLDDRNWTCPNCGIHHIRDWNAAKNILDKGIAKLA
1749103..1750086                   PHAGE_Paenib_Vegas_NC_028767: transposase; NUU04_09065; phage(gi971741608)           3.64e-89            LimosilactobacillusfermentumMPKVELNLEDDELKELLLGDRDKAMQSIMAKILDEILKSEATEQIKAKAYERSDERTNSRNGYRVRQLTTRVGSLELHVPKLRHGNFSTQLFKRYQRSEQAFDLALMEMVIQGVSTRKVAEITKKLCGTTFSKSTVSALCSNLDDQVLDFNRRPLTQKYTFVYADAILFKVHRGHVVTSNSLLVAIGIDPSGRREVLGFDIGDSESKAAWMDFFSELKQRGLTNVDMFVSDAHCGLKDAITTQFQGSLWQRCQFHFSNDCTSILALKDRKEVANRLKDLFNAPTYDQAVERRDQLVKDWQTEFPKVVKKLENSFDELMVIYQLPEELR
1750199..1751386                   PROPHAGE_Escher_CFT073: transposase; NUU04_09070; phage(gi26246249)                  1.24e-60            LimosilactobacillusfermentumMNQFNKDIIAALSSDKDITLNEVLRRQIEVAANQFLQNELTAVLGYEPHTRIDRSKGDVNYRNGAYTRTIDTEYGEINLTIPRDRLNKFQNALFPPYVRRTDGLEEMVIKMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERRFKYSQYVCVFLDATYIPLRRGTVEREAVNVAIGIRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQSAIEANYPQAKFQRCWVHAERNLLGYVRKNDRREIITDFKAIRQAENLQAAKERLVAFSAKWESSYKRRIKNLVQMEELFTFFSFPTAIRQTIYSTNLIESFNKSLKKMVRRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF
1751450..1751689                   PHAGE_Paenib_Vegas_NC_028767: transposase; NUU04_09075; phage(gi971741608)           6.74e-16            LimosilactobacillusfermentumRKRLRTNNTIERVNQEIRRRDRVIRIFPNDLSVLRLMGALLIEQNEKWAAGPRYLNMTVYHGIEKDDNSEEAGMLKLVK
1751869..1753008                   PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; NUU04_09080; phage(gi588498272)     4.66e-41            LimosilactobacillusfermentumMTHLNDIKTDTNVSTRSKGSHLTIDDRVNISVLKELEYSNRMIAQYIGVAHGTIDREIKRGMVTKMSKQSNNGKVYCYYKEYYDPYTAQERYEKSRSNCGRTPIYQLSPEIINLLDDLMLGEFDFKDHDKFESLDSQKCSPYAALKIAESLVNDDVKLPASERSIYNWIDKGLLRTKNIDLLEKTRRTKAKHGRTPKREQPGKNISQRPKEVETRTTFGHWEMDTVQGKKSAEDPVILVLAERLTRYNLAFKITSKTPNAVSRVITKLKELTGDYFDEIFKTITPDNGSEFFEVANEVDQVYYADAYSPWQRGTNENNNRLLRRSITKGTSLQLFSEFDVEQANLRLNSYPRKILGGKSSLDRFEEEILKIIDPETLAV
complement(1753098..1753601)       PHAGE_Bacill_vB_BhaS_171_NC_030904: hypothetical protein; NUU04_09085; phage(gi100038)     3.83e-09            LimosilactobacillusfermentumMVNNKIKQLRLSKNLSQEQLAEKAKVSVRTIQRMEAGDDASIETLNLVAGALSVSVKELFDDSPAQKNKIRNAEENLQYQLKNRHDEFKTFKHIYLTCYIIVMMLWGVCFDFLHNDAWSAIMGVLWIGGWMLMGQLTKLITLKWIDPKLDLKYPLTASRIDKDREDK
complement(1754449..1754679)       hypothetical protein; NUU04_09090                                                    N/A                 LimosilactobacillusfermentumMKDEFHKVDDGTTLWSDDGKYYYDNDCYPNVRLIRDGNYLRDEDNKKVYEIVEDKFIYLREDNFKHVEGKPYIWYK
complement(1754705..1757821)       PHAGE_Lactoc_LW31_NC_049806: hypothetical protein; NUU04_09095; phage(gi100003)      6.14e-06            LimosilactobacillusfermentumMSKGYLLESDVENLALDTLQKVGYDVYKSPSPTSPNPEIDKMRNNDHAVAVLTEQLQSSLKKLNPGYPEEIYKEALRQLTRLADNPDMMVNNHYFHKLVIEGIRVKTTVNGENRTEVLYPIDFDHVENNKFVATNQFTFKGSRERRPDTTIFVNGLPVVTFEFKDASNPNVSIENAYRQLQTYKAEIPEYLKYNEILIASDGINSRAGSLTAGFDRFMRWRAPKDINTGNDLELEIMIKHMLTPKALLNLIENFIIFETDGDNTIKILAAYHQYYMVNKAVKAASRTLADPNDKRIGVVWHTTGSGKSLSMVFFASIVARKLNNPTMLVINDRNDLDDQLFDTFAAAHEFLRQTPEHVESRAELRKFMDKQSGGIVFSTIQKFSPDFDSGETEMSVLTNRSDVIVIADEAHRSQYGLKAKFTNNGLRYGFAKYLRDALPNASFIGFTGTPISTADKSTVAVFGNYIDVYDITQAVNDHATVKIYYESHVFPLKLKFDAQAKYQQLLKEANLDDDPSLEENARRNREFSRLEALAGAQPRLESIAKHFVSHFEARQKETFGKAIIVEMSRRNAVRLYNEIIKLRPEWDSDDLNKGKIKVVMTSSAADGPEMAKFQTSKADRRILQKRMKDNNDELQIVIVVDMWLTGFDVPSMNTMYIDKPMKGHNLIQAIARVNRVFKDKDSALIVDYIGIAENLKEALNVYSTEDQGQVGINMKKALALLKEKYDIITNDFLYGVDYSGFDSEDGAVRLKITRRVANEILGEDEETQQKFLDVVTELQKAYALTSTQPEAQAYGKEIAFFKTVKVFIQKLKQPITPVGSEEHTDVKYQMQQLLDQSIISEPNVDIYNELGIKRQSIDLISDEFLQKVNSMPEQDVAIALLEKLLKGKIKAMMKSNKVTSEKFEDMLQKSIDEYNQRGITSEIVIRKLIDMAKKINAEQEKGKDLGLSQEEIAFYDALADHKKAVEVLGEKKLHLIAQELVKLVKEEAGVDWEKRRNIQAKMRVAVKHLLRKYGYPPDIAPQAVNTVVEQAELMATND
1758173..1759105                   PHAGE_Staphy_phiPV83_NC_002486: transposase; NUU04_09100; phage(gi9635740)           2.01e-50            LimosilactobacillusfermentumMSHILTLSDRTVIQTLLKVGYSQKQIAKEVGVAPSTINYELKRCPKGYYDADQAQEDCEKKLTRRGRKTLLTENLREFVRGIILEQRWSFEVIAHILQMPFKTLYNWLDKGWLDIKREVLPDHGVRYRKSHDGRGQYTRGAKFIDQRPDEANLRQEIGHFEVDTILSGKTRGEVLATFTDRKSRLMIIRRLPGRDSKAMTKAILELNEELRGLIKSITSDHGKEFAGFKEIEAYGIAHYFAHPYAPHERGTNERLNRELRLHIPKNQPIESVTDEELTMISKYLNWRPRKCLGWKTPLQVFFGDLSEKFD
1759114..1759506                   PHAGE_Lactob_BH1_NC_048737: hypothetical protein; NUU04_09105; phage(gi100026)       5.80e-09            LimosilactobacillusfermentumMYHKYNFDGIYLLLGEDGTVQDEYGFPILQYTFGKFWPNNHAHVLQGKNVSTEWLYLYFSQRNISGIVTGAVQKKVSQKNMNSLKFKLPDSQELKKFDKIIQPLFSKIRSTKLENYHLEELKRVLLTKLF
complement(1759503..1760045)       restriction endonuclease subunit S; NUU04_09110                                      N/A                 LimosilactobacillusfermentumMKVKLKDISITKGSYGINASAVDKVSQKQVSYLRITDIDEFGNIRSKNMKTVDSKDYEKYLLQKNDIVFARTGNSVGKNYFYDERDGKLVYAGFLVKFSLNEDKVYPKYFKYFAQTNKCQGWIKNMASDGSTRPNINAQQLGNIELDLPVYSRQKSIADKLSIIDDKMRLNEQINANLVA
1759715..1759726                   attR                                                                                 N/A                 TAAAATATTTTG
complement(1760062..1761033)       PHAGE_Bacill_vB_BtS_BMBtp14_NC_048640: tail fiber protein; NUU04_09115; phage(gi100052)     6.16e-18            LimosilactobacillusfermentumMNPVIDEIIQEMLRVLDNSQLLQLKQVLQQKLGKASANQSDTKNETYISDYLAAKQVEGCSDKTIKYYQATLTMMNSSLKKNIQKVTTEDLRKYLGDYQESRNSSRVTIDNIRRIFSSFFSWLEDEDIIIKSPVRRIHKVKSSTKVKETYTDEDLERLRDSCKSKRDVALIDLLASTGMRVGELVHLNINDINFEERECVVVGKGSKQRMVYFDARSKIHLLNYLSSRHDNNPALFVSLHLPHQRMSINGIEGRLKKLGKKIVGLQKVHPHKFRRTLATNAIDKGMPIEQVQKLLGHERIDTTLHYAMVKQSNVKIAHRKYIG
complement(1761106..1762251)       restriction endonuclease subunit S; NUU04_09120                                      N/A                 LimosilactobacillusfermentumMKFDSLGNVCTKVTDYVANGSFKSLKENVTYEDRQNGYAALIRLADYRNQFKGPFQYIDKHGYDYLKKTKLYGNEIVISNVGAHLGTVFRVPKLHLPMSLGPNSIVISTKYNDDYYYYYLTSPVGQSLMRSIVSGSAQPKFNKTDFKKLLVPVPSLDEQNRIAGKLLTIDKRIRINRQLNANLDELMSEIFERYVTEANAFTTDSLSNIADYKNGLAMQKFRPKGADKGLPVLKIKELNQGFTDSSSDRCSSKISNDVIVKTGDIIFSWSGTLIVKIWAGTTCGLNQHLFKVTSDKYPKWFIYKWTEYYLRQFQSIAAGKATTMGHIKRSDLKQAEVKIPHKSEIDRLDKIISPIFKNYVNNILEINSLKELKNELLSKLF
complement(1762241..1763773)       PHAGE_Acinet_Bphi_B1251_NC_019541: putative restriction-modification protein; NUU04_09125; phage(gi423261981)     7.66e-20            LimosilactobacillusfermentumMATKSKELSIEDKLWKTADALRGSMDASEYRNVVLGLIFLKYVSDSFETRHEELLKSDYPEDAEDPDMYLSENIFWVPKGARWELIQQSAKTPQIGEIIDNAMDAIEKNNDSLRGVLSKNYASPDLDKSRLGEVVDLISDINLGNEKAKRSDVLGRVYEYFLNEFASQEGKKGGEFYTPRSIVRTLVEMIEPYKGRIYDPCCGSGGMFVQSDKFVQEHQGKIGDLSVYGEESNPTTWKLAKMNLAIRGIDNNLGPHQGDTFTNDLHKGERFDFILANPPFNVKNWNGDKLRDDARWQYGVPPVGNANYAWIEHIISKLAPDGKAGFVLANGALSTSIKEEYAIRKAILEDDKIDSIVALPDKMFYSTGIPVSLWFVDMNKESADERARKGETLFIDARNLGEMVDRTHREFSKDDIKKVADTYHAYRGTNGQEYKDVPGFCKVAKLEEIAKNDYVLTPGRYVGLAKQEDDGEPYEVKMARLTGELKKQFEESNKLQAEIKDVLKELGYEI
complement(1763776..1763982)       PHAGE_Bacter_Lily_NC_028841: Xre-like protein; NUU04_09130; phage(gi971748289)       1.06e-11            LimosilactobacillusfermentumMHFSYNKLWKLLIDKGWKKKDLREKSGISSASIAKLGKDGNVTTEVLLKICKALNCDISDIMEIVKES

#### region 14 ####
1764009..1764020                   attL                                                                                 N/A                 ATTTATACAATT
1766485..1767624                   PHAGE_Coryne_Stiles_NC_048789: hypothetical protein; NUU04_09155; phage(gi100043)     1.69e-101           LimosilactobacillusfermentumMSSPTHHALLSASSAHRWLSAPPLPRLEQYFPHPTSNAAAEGTAAHALGEYKIHRLLGDHFKRPTSDYQSDEMESLTDDYASYVMEQYQEAKQYAQDATISVEQKLDFSKYVPEGFGTGDCVIVSDHLLHIIDFKYGKGVRVEAKNNPQMKLYAIGALEMFGNLYNVDEIETTIFQPRMANISTWTINAKQLMHWATTELKQKAELAFAGKGTVHYGPWCQFSACNAVLRARYDYHHKLTRFQLCSPNLLTDSDVAEVLNHIDDLNRWAHEVKDYAADLAINHGKQWPGFKIVEGRSIRHYKDEQAIARIAEANGIHDIYQKKILPITKLEKQLGKKKFTELFSQEIVKPAGKPTLVPNSDRRQSIGKSNPKDEFKEEN
1767602..1768177                   PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; NUU04_09160; phage(gi100017)     9.86e-73            LimosilactobacillusfermentumMNLRRKTNMSQNTKVVTGVKTRLSYANVWAPKSINGGKEKYSVSLIIPKSDKKTVTAIEKAVDAAIQEGVGKFGGKRPNKATLKLPLRDGDVERDDEAYQNSYFINANSITAPQIVDKHVQPILDQNEVYSGCYARVSINFYAFNTNGNRGIACGLGNIQKIRDGEPLGGHASASDDFTAIDDDSNDDFLA
1768338..1769336                   PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; NUU04_09165; phage(gi588498272)     7.66e-64            LimosilactobacillusfermentumMSSYNHLTLKDRECILLGVTLKDTYQVIAQRVGCSKATVSREIKRNGGRKAYSAVKAQENYQGRRLKSRRPRLLTNLKLRDFILHCIVQRQWSPEQISGRLAHENSEWRISYNTIYRGIERDNLGIKRKSHGARGFARKLRHRGKTRKVKGTIKERRGRFNDVPSVHERPVSCENRSRFGHWEGDTIRGKTGRSALVTLVDRKSRYLLSQRVLKVNAKNVTQAMIDLLHTVTPKRVRTLTPDRGTEFAGYREVSQELSIPVYFPDPHAPQQRGTNENTNGLIREYFPKGTDLDQLTDQDIDKFVRDLNHRPRKVLGWKSPFEVFFGTKLRLI
1769359..1771293                   PHAGE_Coryne_StAB_NC_048780: HNH endonuclease; NUU04_09170; phage(gi100046)          0.0                 LimosilactobacillusfermentumMKQISIDIETYSSTNLNQTGVYRYADSDDFELLLFGYAVDFGPVTVIDLTQGERIPSEIIQALDNPNIIKSAFNAQFERVCLSHYVGHRLKPAGWHCSRVWSATLGLPLSLKDVGTVLGLSRQKITAGKELVRYFCTPCKPTKANQNRTRNLPYHAPDKWQQFKQYNQRDVEVEMEITQRLSRFPVPQNEWQNYWMDQDINDRGIKIDQQLVDNAIKCQAEFHNQYLEKAKELTGLDNPNSPLQLKDWLNQQGIQVDSLSKTSVAQLLQNTTGKVHQVLTLRQLLSKSSVKKYQAMQKAKCKDGRVHGLLQFYGASRTGRWAGRLVQVQNLPRNSMLDLEAARELVKQGNFSTLDMLYDSIPDVLSQLIRTAFIPKENCHFYVADFSAVEARVIAWLSGEGWRQKAFAQNKDIYCASASQMFGVPVVKHGINGNLRQKGKIAELALGYGGSIGALKAMGAIKLGLTEDELPSLVEMWRQASPHIVRFWWDIDKAAKACIKTHLPQESHGMEFTYRSGCMFLQLRSGRSLCYPQPKIGINRFGSESITFMGINTVKKWSRIETYGAKLVENIVQATSRDLLAETMRRLEAADNPVVMHIHDEAVIEAPTNRSLDTMIKIMTEVPDWANGLILNAAGFIGDFYKKD
1771380..1771766                   hypothetical protein; NUU04_09175                                                    N/A                 LimosilactobacillusfermentumMSEATITITKLRQDKPNPHYRPMIFVIAPFTEVVKSDAESIRTARSNCRFVYQHGGIPVCPQLYLPQFINLHHSREFQVAAFINIVLLTKCAEAWSFGKPTHDMCYFISFAKRKNKNIRYFNNEMEAN
1771769..1774024                   PHAGE_Lactob_T25_NC_048625: hypothetical protein; NUU04_09180; phage(gi100020)       8.07e-51            LimosilactobacillusfermentumMHFTLSTAVNSGQASNTIYPHQQTITNAQELEQSAHYDHVCGQFKNNQRAIANFIKADCLIMDCDNDHSDDPTTWIKPANIANYFDDVSYAITLSRNNMKAKHHKVPRPKFHVYFPITEITDAKTYAELKHEIQEYFPYFDDNALDAARFVFGVPSTKAIWHDGSQNVDQFMVAQRYFEQQGVGAIHEGQRNATLSHFAGRIIMRLGNTAEAQQAFQEEAAKCDPPLSKQELKTIWNSAIKFGQRMASQKGYIPPEEYNQPNDELQPADYSDTGESYVFVNNCKNRVCYTNQSGFMWFDGKVWQESEPLALGEVQRFTDKQLADAQLRVTQSYQAIQNNGVAKALQTMGKTKASRTFNDEQQAAFKNYENAKAYEAFILKERSTRGINGILTNSRPKLVKEINDFDADPFLLNTPNGAFNLKKGMHGQQEIQADELITKSTFCVPGNQGASLWQEALTTFFCGDQALINYVQEIVGLVAIGQVYLEALIIAYGSGRNGKSTFWNTIANVLGTYTGHLSADALTTGVRRNVKPEMAEVKGKRLIISAELEEGKRLNTSIVKQLCSTDEIYAEKKYMKPFSFTPSHTIVLYTNYLPHVGGNDEGIWRRLIVIPFKATIAKRNDIKNYAQYLTEKAGPAVLQWIIEGAQRTIQQNYQLTTPVAVTKAVQAYHADNDWLGHFLNENCELDPSYEQKSGDLYQKYREYCQVIGEYIRSTTDFYTALKNAGFQRQHKQNGRFIKGLRLKVEADEFLS
1774238..1774519                   PHAGE_Coryne_StAB_NC_048780: recombination protein; NUU04_09185; phage(gi100049)     1.74e-25            LimosilactobacillusfermentumMLEKRIETAFVKATHQRGGLCLKFTSPSMAGVPDRLVLLPDGHMGFVEMKAPGKHPRPLQVQRINQLKRLGYQVFVCDQFDQIGGMLDAIQAS
1774500..1775855                   PHAGE_Coryne_Stiles_NC_048789: putative single-stranded DNA binding protein; NUU04_09190; phage(gi100050)     0.0                 LimosilactobacillusfermentumMQYKPHKYQQYATQFILDHPVAAILLDMGLGKSVITLTAIKRLIDRGEVQRVLVVAPLRVAKQTWPEEIEKWDHLKGLTYSVVTGSRTQRIKALQQDVNIYIINRENLKWLIESSGTSFDYDMLVIDELSSFKSYRSQRFKALKRVRPLIKRIVGLTGTPSSNGLMDLWAEFRVLDMGQRLGRFISSYRMNYFDPDKRNMYQVFTYKPKPGAEQSIYRAIDDITISMKSKDYLNLPPLTMNTVPVKMSDSEQAIYDELNSQLVVSTQGKQIDALNAASLSNKLCQMANGCVYDDHQQIVQIHQRKLDALEDLIEAANGKPVLVAYWFKHDLSQIKQRFTAREIKTVKDIQDWNAGNIPLALIHPASAGHGLNLQAGGATLIWYGLTWSLELYQQTNARLWRQGQRQPVVIHHIITEGTIDENILVALKRKDKTQLALINAVKANLKGSVME
1775852..1776319                   restriction endonuclease; NUU04_09195                                                N/A                 LimosilactobacillusfermentumMSIMWNYLDKRRATVAALKDYDGMKFIIDSYQDDLKLAKEQMIGVSSPRYGFVPGSSKKDNPTEHRLLHGIDQTTKLNERYQQAQLYFKWFEPAWQELSEDERFVLDVCYRTPNQSMNEGLTIVMDKYFIAKTTAYNRKNKALDHLTLLLYGAHH
1776664..1776843                   PHAGE_Paraco_Shpa_NC_041868: methyltransferase type 11; NUU04_09200; phage(gi100001)     4.37e-08            LimosilactobacillusfermentumMCLSQGRYTQATEVHHVLPLEHGGTNDFNNLMALCKPCHSRITAQMDDRWHKAPRQYHY
1776964..1777506                   P27 family phage terminase small subunit; NUU04_09205                                N/A                 LimosilactobacillusfermentumMAKDGTNRGGARVGAGRKSKSLHDKIQAGQDAQVIDLPTPANLEGHVMPPVKKYLKAKQKNGLEFDAADIFKETWKWLVERGCEKLVNTQLIEQYAVSVSRWIQCEECISKFGFLARHPTTGNAIASPYVSMSRDYMKQSSQLWFQIFQVVKENNATTYQGSTPQDDVMERLLRSRKGMN
1777506..1778342                   PHAGE_Faecal_FP_Epona_NC_047910: u-spanin; NUU04_09210; phage(gi100032)              3.23e-86            LimosilactobacillusfermentumMKFVKKKIDDLIPADYNPRKDLQPGDPDYEKLKRSMREFGYVDPIIWNQQTGHVVGGHQRLKILHDERIEEAECVVVSLDKEKEKALNIALNKISGDWDKDKLALLMTDLQASDLDVSLTGFDEDEISDLLGTEEDTHDDHFDVDSELNKPTFSKKGDLWHLGRHTLICSDATKKESYRKLLGNNKVNLVLTDPPYNVDYQSKAGKIKNDHQDDDKFYQFLLAAFQNMNNAMANDASIYIFHADTEGLNFRRAFQDAGFYLSGCCIWKKQSLVLGRSPY
complement(1778391..1779269)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; NUU04_09215; phage(gi48697274)     4.98e-48            LimosilactobacillusfermentumMDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELGIHAVYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLIEKAKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTKIQNLVVA
complement(1779293..1779580)       PHAGE_Lactob_phiAT3_NC_005893: putative transposase A; NUU04_09220; phage(gi48697273)     3.25e-06            LimosilactobacillusfermentumMTKHSYDKEFKEQAVQYYLDNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGSGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
1779659..1780054                   PHAGE_Faecal_FP_Epona_NC_047910: u-spanin; NUU04_09225; phage(gi100032)              3.61e-23            LimosilactobacillusfermentumPYQWQHEPVLYGWKQNGKHEWYTGRKESTIWEFDRPKQSKEHPTMKPIPLLAYPIMNSTMSNCTVLDPFGGSGSTLIACEQTNRVCYMMELDPKYCDVIVNRYIEQVGPNKEVIVERNGKSIPYSKVKMPT
1780127..1780747                   hypothetical protein; NUU04_09230                                                    N/A                 LimosilactobacillusfermentumMEINFNVHGQERKKLVELIADYARQKAEYQYTPTYAYKIGKYTVSKDGNLSSPDEIPSDLVDKLKELGFQPANIIKLHLAYCRNDFTDQALENLRHLIWSKGQLIKDACQLDSLQLDVDEQQVTFNWFNKVKMEEASAYQQFADKLVRYAKDHQRIMSEPHEENNEKYAFRCFLLRLGFIGPEYKMQRKVLLRNLTGSSAFKNQEA
1780750..1780956                   DUF5049 domain-containing protein; NUU04_09235                                       N/A                 LimosilactobacillusfermentumMSRIKDELARRDRIRQQILQIRNTGEVNMFDIENVKRLAYYYNCHELINYLNTDRAGYVNLILTGKFN
1781021..1782619                   PHAGE_Gordon_Nymphadora_NC_031061: hypothetical protein; NUU04_09240; phage(gi100002)     6.82e-107           LimosilactobacillusfermentumMRKLKDYKPTRFMAKDSTYNKDAADFAVSFIKCLCHTKGTWAGKPFELIDWQEKIIRDIFGILKPDGYRQFNTAYVEIPKKQGKSELAAAVALLLCCADGEERAEVYGCAADRQQAAIVFDVAADMVRMNPALKKRCKILASQKRLIYEPTNSFYQVLSADAYSKHGFNVSGVIFDELHTQPNRKLYDVMTKGSGDARTQPLYFLITTAGNDENSICYQVHQKAIDIMKGRKHDSRFYPVIYGASQDEDWSSPEVWKKANPSLGITVKMEKVKDAFNSAKENPAEENTFRQLRLNQWVKQDVRWMPMDKWDDCAFPVDPDGLRGRDCYGGLDLSSTTDITAFVLVFPPRDDSEGYTLLPYFWIPENNVDLRVRRDHVPYDIWKQQGYLQTTEGNVVHYGFIEHFIDDLGKKYHIREIAFDRWGAVEMVQNLEGMGFTVVPFGQGFKDMTPPTKELMRLTLEKKIAHGGHPVLRWMMDNIYIRTDPAGNIKPDKAKSTEKIDGVVATIMGLDRAIRNEDNGDSVYDGRGLLML
1782648..1783913                   PHAGE_Klebsi_phiKO2_NC_005857: putative portal protein; NUU04_09245; phage(gi46402090)     2.33e-86            LimosilactobacillusfermentumMGLFNKLFHTNKASPKNTLSSTMSFFFGSSMAGQNVTERTAMQNTAVYACVRVLAEGLAELPLHIYQYTSDGGKQRAINHPLYFLLHDAPNPEMTSFIFRETMMNHLLLWGNAYAQIIRNGQGEITGLYPLMPDRMDVNRAANGEIYYTYTRNYDDYQAKNKSKQVILLSDEVLHIAGLGFDGLIGYSPIAMAKNAIGLSMAAEQYGATFFKNDATPGGVLEHPNVVKDPERLRKSWQSQFSGSNNHSIAVLEEGMTFHQLSIPPDQAQFLDTRKFQLDEIARIFRVPPHMVGDLDRSTFSNIEQQSLEFVKYTLNPWCIRWEQAMNQQLLSADDQRKFFVKFNVDGLLRGDYESRMNGYAIGRQNGWLSANDIRELEDLNRIPADEGGDQYLVNGNMLPLNQAGNFYNTQTTKESEEPKE
1783910..1784581                   PHAGE_Geobac_E2_NC_009552: putative Clp peptidase; NUU04_09250; phage(gi148747731)     2.16e-41            LimosilactobacillusfermentumMKRFWNWKQNGDQRQLAISGVIAPDSWVHDDVSPQVFQDELNESQDPIDLWLNSPGGDCTAASQIYTMLMNYPNEVNVKISGIAASAASVIAMAGTTVSMAPAAMLMIHNPLTIVGGQERDLDHAAQMLAETKESIINAYELKTNLPREKISTMMDNETWMNVNKAIELGFADAMLGDNKNVTDCYSYSDKQSDLVLLNKLKPKAKSTISVKSLQKRLSLLSH
1784600..1785778                   PHAGE_Geobac_GBK2_NC_023612: minor capsid protein; NUU04_09255; phage(gi589893767)     1.12e-43            LimosilactobacillusfermentumMNKITELQEKRARIWKQAKYFLDTKQKEADVLSAEDNATYEKMEQDVVNLGKEIDRLHKQAQIEAELNQPTTKALTNTPTAGELPKGQDAYAQNFWQMMRGHAVVDALKEGTDPDGGFLVPNEFENQLIQKLQEANVLRTISHVIQTNSGEHKIPVVASEGTAAWLEEEAAYTESNTQFSQVSLGAHKLGTLIKVSEELLNDSAFDLMSYLSDEFGRRLGNAEEQAFLTGTGTGQPTGILTDTNGASAGSTAAKADTLTFDDLIELFYSLRAPYRQNAVFLMNDDTVKTIRKMKDKNDQYIWQPSVQAGQPDRILNCPVYTSPFMPTLAAANKPVLFGDFNYYWIADRQGRTFKRLNELYAVTGQVGFLGSQRVDGKVILPEAIKTLAMAAK
1785795..1786073                   head-tail connector protein; NUU04_09260                                             N/A                 LimosilactobacillusfermentumMAAITLAEAKAYLRVDNTVEDDLITKLIGSATATVENVLRQPLSAFDPLPDDIHTAILYTVAYLYEYRETADFDAMIKFLRAILSPYRKEEF
1786073..1786456                   PHAGE_Clostr_phiCT19406C_NC_029006: head-tail adaptor protein; NUU04_09265; phage(gi971821549)     1.10e-12            LimosilactobacillusfermentumMQQQNKRVSKIADIGELDRRITLMKKKYVGENPNTGMSMYKDVRLGDVWAKVSALHGQEYYTAVSVKLEKQLSFIIRYRDDVDEETNIWFEGHGYNIGFIDDVKYNHEYMEIKAEYSRGVDNPNEDN
1786443..1786853                   PHAGE_Bacill_250_NC_029024: holin; NUU04_09270; phage(gi971766651)                   2.53e-31            LimosilactobacillusfermentumMKTTSLTVINTCFGAIGAFLGWFLGGLDGFLYVLLIFMVVDYITGVLCAVNEHKLSSEIGFRGLTRKVLILLLVGIAHCLDIYLLKNGSAIRTATIFFYISNEGISLLENTSRLGLPVPDKLKSVLQQLHDKDDNN
1787322..1787555                   hypothetical protein; NUU04_09275                                                    N/A                 LimosilactobacillusfermentumMVKKVQPVTHQPLITTSENISSEQLLNDLHYQQSKQIIQNLLNKGLISPTEFKGIDALNKQSFPPLLGPGNVDTSKL
1787591..1789252                   PHAGE_Anoxyb_A403_NC_048701: tail length tape-measure protein; NUU04_09280; phage(gi100057)     1.09e-42            LimosilactobacillusfermentumMSTITKIQSYQRDVKQLRVAAYCRVSTNNIEQLESLENQREHYQKYISNQPNWQLAKIYYDEGISGTKLTKRDALKELLTDCHNHQIDLVITKSISRLSRNTTDCLRIVRELQQLNIPIIFEKEHINTGEMASELFLSIFSSLAQDESHSTAGNLRWAIRQRFASGKFHVSSAPYGYSIKDGNLVINHTEAKTVRQVFQRFLSGISASQIAKKLNQKQVPTKRGGQWRSNTVINILRNINYTGGMLCQKTYRDDQYHRHFNQGEITQYLIEDHHPSLINHRSYHRAQVLIKEAAQKHHIEVGSHKYQQHYLFSGKITCGYCGTVFKRQTRPHKICWACQQHLKSAQQCPVKAVSEKSLEAAFCNMINELVYSEKFLLRPLLEGLKEEANANSDGQLISLTKQIKTNDHKAETLTELMHASLLDKAIYVNQTAKLEQDTYQCREKIKQLNGQNTDSANNFEDVRALLRWCQQGQMLTEFDGTLFQEFVRQVVVNSSNEATFNLKCGLSLPEKLNKNATIDGHFYRDIIKQRYNDPIKQTEYLYSIIESEGDLIG
1789245..1790822                   PHAGE_Lactoc_28201_NC_031013: methyltransferase type 11; NUU04_09285; phage(gi100001)     1.92e-29            LimosilactobacillusfermentumMGKVRIIPAHQQKGNSVQPQQSRQPFEQLRVAAYCRVSTDYDEQASSYETQVVHYKELIQKEPTWEFAGIYADDGISGTNTKKREQFNQMIAACKAGKIDLIVTKSISRFARNTIDCLKYIRDLKAINVAIFFEKENINTMDAKGEVLITIMASLAQQESESLSQNVKMGIQYRYQQGKIFVNHNHFLGYTKDAQGNLVIEPAEAKIIKRIFYSYLNGMSMKQIADSLKADGILTGGKTKNWQSSGVSRILKNEKYMGDALLQKTYTVDFLNKKRVKNNGIMPQYYVENDHPAIIPKPVFMQVQQLIKQRQNGITTKNGKHRRLNGKYCFSQRVFCGKCGDIFQRNMWYWPEKVAVWRCASRIKRSKSGRRCMIRNVKEPLLKEATVQAFNQLIEGHKLADKQIKANIMKVIKNSKGPTLDQLDKQLEEVQMKLIQAANQHQDCDALTQQIMDLRKQKEKVQSRETDQQAKLHNLDEINKLVELHKYGLVDFDEQLVRRLVEKITIFQRYMEFTFKDGEVIRVNM
complement(1790888..1791141)       MarR family transcriptional regulator; NUU04_09290                                   N/A                 LimosilactobacillusfermentumMLNHRQTKILFESLATLQAIQKQAYQMLMQGLTTTGFSMREWENSIWNNTDKPLLVNLMRSWLRAHFPETLGDFKIIFNCT
complement(1791153..1796582)       PHAGE_Staphy_SA11_NC_019511: hypothetical protein; NUU04_09295; phage(gi422935728)     1.45e-05            LimosilactobacillusfermentumMLRNNYFGETKTHYKLYKCGKNWAVMGISLFSLGLGMLVTSQPVSADVTATSTSSSAVRTDAISASSSSAAKAETTSASSSSAAKAETTSASSSSAAKAETTSASSSSAAKAETTSASSSSAVKAETTSASSSSAVKAETTSAKTRQTVTKISYNTLLQQLRTSKALATDKEVLTHVTKDNFLAYFSLNGSATYDQNTGIVTITPDEYNKVGNFSLKSKIDMNTSFTLTGKVNLGSNPNGADGIGFAFHNGNTTDIGNAGGNLGIGGLQNALGFKLDTWSNGYQAPQSDKDGSQIDSTNSNDFGWNGDSMNAPYGTFVDTENEEVATKDGIKVQRWWAKDVDGTSQALSKSDVNGQFHDFTVDYDGDTRTLTIKYTQTSGKILTWTTTVSNSNQAMAMIVSASTGGAKNLQQFEIMSFDFNQAATVNVKYVDTKGNQIAQGEVTYPNGANVNGTYTTGQLEIPNYKFVRMDDGTATGAKSLPATGTLTKAGDNGTVIYVYAPAYTQTSKTVSETIKYIDQDGKEVAIGYTADPITFVSVTNPVDNTTTTYYSTKAKTATLDDNGVPTEAGWTKGDSTDFADVVNPEVDGYKVISNDAPNSDLTSVAVQTVYTNSSDLDFTVVYAKNAPTITTESKTINETIHYVYKDGTTAHDDYVAKPVEFTRQVSTDAVTGEKTYGSWSADQSFAAVTSPVIKGYTPDQAEIGAQTVSGDSSDLDFTVVYAKNAPTITTESKTINETIHYVYKDGTTAHDDYVAKPVEFTRQVSTDAVTGEKTYGSWSADQSFAAVTSPVIKGYTPDQAEIGAQTVSGDSSDLDFTVVYAKNAPTITTESKTINETIHYVYKDGTTAHDDYVAKPVEFTRQVSTDAVTGEKTYGSWSADQSFAAVTSPVIKGYTPDQAEIGAQTVSGDSSDLDFTVVYAKNAPTITTESKTINETIHYVYKDGTTAHDDYVAKPVEFTRQVSTDAVTGEKTYGSWSADQSFAAVTSPVIKGYTPDQAEIGAQTVSGDSSDLDFTVVYAKNAPTITTESKTINETIHYVYKDGTTAHDDYVAKPVEFTRQVSTDAVTGEKTYGSWSADQSFAAVTSPVIKGYTPDQAEIGAQTVSGDSSDLDFTVVYAKNAPTITTESKTINETIHYVYKDGTTAHDDYVAKPVEFTRQVSTDAVTGEKTYGSWSADQSFAAVTSPVIKGYTPDQAEIGAQTVSGDSSDLDFTVVYAKNAPTITTESKTINETIHYVYKDGTTAHDDYVAKPVEFTRQVSTDAVTGEKTYGSWSADQSFAAVTSPVIKGYTPDQAEIGAQTVSGDSSDLDFTVVYAKNAPTITTESKTINETIHYVYKDGTTAHDDYVAKPVEFTRQVSTDAVTGEKTYGSWSADQSFAAVTSPVIKGYTPDQAEIGAQTVSGDSSDLDFTVVYAKNAPTITTESKTINETIHYVYKDGTTAHDDYVAKPVEFTRQVSTDAVTGEKTYGSWSADQSFAAVTSPVIKGYTPDQAEIGAQTVSGDSSDLDFTVVYAKNAPTITTESKTINETIHYVYKDGTTAHDDYVAKPVEFTRQVSTDAVTGEKTYGSWSADQSFAAVTSPVIKGYTPDQAEIGAQTVSGDSSDLDFTVVYAKNAPTITTESKTINETIHYVYKDGTTAHDDYVAKPVEFTRQVSTDAVTGEKTYGSWSADQSFAAVTSPVIKGYTPDQAEIGAQTVSGDSSDLDFTVVYTKDAPTKPVNPIQPTTPAKPVNPSQPATPAKPVNPSQPATPTKPVQAGQAAATNFVDQRLPQTGETDQQHMTLSGLLLLAMSSLLGLFGMTKRQRKE
1802544..1802555                   attR                                                                                 N/A                 ATTTATACAATT

#### region 15 ####
complement(2046714..2047697)       PHAGE_Entero_DE3_NC_042057: hypothetical protein; NUU04_10550; phage(gi100002)       2.19e-24            LimosilactobacillusfermentumMEKKIKLDDVARLAGVSKATASRVLNHRGYLSQKTIDKVHQAMEDLNYRPNAIARQLYKQETMLVGLIFPTINNPYFAQLEAALEKCLYNEGYRAVMGNSENNAKKEENYLQLLLDRQLDGLIVGAHNPEIPAYHKTSLPIVSIERVVSNQVPVVSVDNYEGGRLATQRLLDDGCQHIIHTNYPGGFASPNQARESAYRDLMSQNDRPAIVYQVPFDEPEDQKLVRIRKIFEEHPEVDGIFADNDTNARLALTAATEAGRRCPEDIKIIGFDGADMTRLLLPELTTIQQPIQEMAEAAVELLKEKIAGEPAVQYRTLPVKLVEGTTA
complement(2047681..2048565)       PHAGE_Escher_RCS47_NC_042128: hypothetical protein; NUU04_10555; phage(gi100020)     7.71e-17            LimosilactobacillusfermentumMKIGFIGTGVMGTGIVKNLLKAGNRVTVYNRTKAHAEEVLAAGASWAASPAEATLNSEAVMVMVGFPADVEETYLGPKGIFSVVQPGQIVVDMTTSKPSLERELKQKTPAGVGILDAPVSGGDKGAKEGTLTVMVGGDQEAYQTMTPVFLQLGKDIHYFGTAGAGQHAKMANQIMVAGTMTGLVETLVYAKAAGLNLQDVVATVGGGAAANWSLTNYAPRILKDDYTPGFFAKHFLKDLRIALEEADAMGIDLPATKVAKQLYEQLVDSGHGDLGTQALIKLWWKDEKEDGKKD
complement(2048685..2049605)       PHAGE_Prochl_P_TIM68_NC_028955: putative carbohydrate kinase; NUU04_10560; phage(gi971760364)     3.34e-07            LimosilactobacillusfermentumMTNRIAVLGSINVDTTYHVARFPEPGETLSATDKSSAPGGKGANQAVAAARSGAQTTFIGMVGADNEGRFMREALQEDGVDTQFVGNDVRHGTGTALVTLDANGQNDIMVYGGANQAMTTAVLDRTDDLWDQVDFLVSQFETPQEVTLAAFKLAKEHGVTTILNPAPAKEILPGLLAVTDVIAPNETESALLTGIEINDEADLAKTADYFRGQGVATTLVTLGSRGAYFNHNGKSGIVPAFKVKAVDTTAAGDTFIGGLVSQLTPSMENLADAITYAQRASSLTVQGMGAMPSIPTRAQVEEALKN
complement(2049890..2050210)       PHAGE_Staphy_vB_SscM_1_NC_047767: putative baseplate hub protein; NUU04_10565; phage(gi100137)     5.44e-26            LimosilactobacillusfermentumMAQVAHKDNFKQLVEGPVTVVDFWAPWCGPCKMMAPVMDQLEAEYGDRIKFVKFNIDEDQETATQFKVMSIPSLVLFRDGKAKEKVTGLYPKDRLAHYLERKLSEG
complement(2050185..2050994)       PHAGE_Bacill_JL_NC_028982: YkoY family integral membrane protein; NUU04_10570; phage(gi971762832)     1.75e-54            LimosilactobacillusfermentumMSLIENLYGPFFDLHNWAAVVTSGQDWLIILSLVMMECLLSVDNAVVLAAQTRVLPTLREQEESLFYGIWGSYLFRFLVIGIGTYLIHFWEIKALGAAYLMYMAYRFFHVKFFGKHSLHKDKKSSRLGKLTGRKRFWAVVAQIEFTDIVFSIDSVLAALAVSNNPVIVLIGGLIGILCMRGIAEFIMRLMRKVPELEPMAYVLIAVIAVKLFLTIPAIDIEIPSGLFGIFILLVFALTGVVHFLRRGKHPASSSKSVGGEKDGTSGTQR
complement(2051051..2051935)       RluA family pseudouridine synthase; NUU04_10575                                      N/A                 LimosilactobacillusfermentumMEYRWQIEERLPVDQEATPLRHLLQRQWLLPKRLVHYLRSRRQVLVNGSYRPVSKTVAAGDVITLNFSGDEFRTPDSSYLPDPGPLTVLYENRDLLVVDKPAGIKSHPNQAGEVGTLMNRVAAYLEGTNDAAYMVHRLDQETSGAMIVAKNPVVVPILDRLISTGEIHRDYLALVAGVPNPARGIWDLPLGQDPTDVRKRKVFGKNAQPARTHYRTLAVNDDRALVVLNLETGRTHQLRVHLAAAGCPIVGDPLYGTVAAPRMYLHGVAQELVLPFSLKRERIVAKIPDDFPQF
2052028..2052948                   PHAGE_Lactob_3_521_NC_048753: minor tail protein; NUU04_10580; phage(gi100055)       2.93e-11            LimosilactobacillusfermentumMLSSVKFNDHSYWVSVFEPLPHERDELFEKYEVTSDLLDYAIDPYEKARIEIDRDAGITLLIFDVYIPNHEESAPQTAPVGIMLTENNVLTFTNAHTNFVNGLIAEQLKRLQAHGDIDTRYDFILPILYRLSTAYFPPIRRADQQRQKIQNNLRRRTERSAITEFMELETGLVYILTSLQGNVSLLQEFKRRFGYRMSVDQQSDLDDVIIEAQQGLEMAQMTSDVTGRVSDAYSKVLDSNLNQTMKFLTVYSIILSIPPIVSGFYGENVKSLPFANNDFAWQITIIVTLIMVAISIWLIFNKRWWR
2053188..2054501                   PHAGE_Clostr_c_st_NC_007581: putative uracil permease; NUU04_10585; phage(gi80159777)     5.97e-09            LimosilactobacillusfermentumMSAEQRLEGQATTFWRHLILGFQHLLAMYSGDVLVPLLIGNYLHFNAAQMTYLVSIDIFMCGIATLLQLKRTALTGIALPVVLGCAVQAVAPLESIGGKLGIGYMYGAIICSGLFIFLIAGVFAKLKKLFPPVVTGSLITIIGFTLVPVGFQNLGGGDATAKSFGAPSNLLIGIVTIIIIVMINRFAKGFLKSIAILLGILLGSLFAGVLGMVSLSPVASAAWFHAPQFFYFATPQFNSSAIVTMMLVALTTMIESTGVYFALSDATDTKITSKDMARGYRAEGIAAMLGGLFNTFPYSTFSQNVGVLKMSGVKTKKPVYYAAFLLILLGLLPKAGALATIIPTPVLGGAMIVMFGMVGVQGIQILHKVDFAKGSNLLVASLSVGLGLGVTVYPQIFQQLPTEAQIILGNGVVVGSACAVILNLILNYQDFFKKEAK
2054682..2055302                   PHAGE_Bacter_Diva_NC_028788: transposase; NUU04_10590; phage(gi971743568)            7.00e-36            LimosilactobacillusfermentumMHDGSLRRWIKGFLQEGVLGVRRSATNRRYSIDLKVAAVVDYQDNGLSRQEVLHKYNIRSNSQLTDWVIRYNSGKLLAPKGAGKRVRKMGRKVSYDEKIKIVQWALDHDSDYQVTAKEFDVSYNRVYDWVRKYQATGNWEVLKDRRGKKPRPKGDALTREEQLEEENRQLKAKVRRLEVERAFAKKLREIRNREVDDPQNTKRFRN
2055290..2056174                   PHAGE_Bacter_Diva_NC_028788: transposase; NUU04_10595; phage(gi971743567)            1.54e-26            LimosilactobacillusfermentumMQELVKEGYTVTELAAVANTSRKSYYIWLKKRQIKTQQEIENAKILAAIRQIEKRHLNCAGYRKVTAILNSDTSKIKEYTFSFDFPINIKRVRRIMREHGIKADIRQPRRNRVKEQQQYLEDNVLHRQFAPDQPNKVWVTDTTELTYGRGNKVRLHAIIDLYGNYALSYFISPTETAKDVIKAFELAKQKTSRLAPLIHTDRGSAYTSREFSNYLIQNQCVHSMSAPGTPADNAVIERWWCDFKHLWLAHQPAPQTYDQLLKLVAEGVKYFNTVEISGKRKNLTAVDYYRSEIA

#### region 16 ####
complement(2203642..2204334)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; NUU04_11345; phage(gi371496158)      9.96e-39            LimosilactobacillusfermentumMTAIELRNVEKYYGQGIARVHVLSDVSFKAELGKLNLVIGPSGSGKSTFLTIAGGLQQPSEGQVLIDGQEISALSGKQRDRLRLDKIGFVLQSYNLLPYLTVRDQFALVDRMRHGNLSKGELGDLLKDLGIEKMIHKYPGELSGGQNQRVAIARALYTDPQIILADEPTAALDSDRVKVVGQLFSDLAVKHNKAVVVVTHDLRLREFADQVYTIVDGQMAKEERPLGTPA
complement(2204347..2205408)       ABC transporter permease; NUU04_11350                                                N/A                 LimosilactobacillusfermentumMFLAIKEILHEKVRYGLIVTMVVLTSYLMFLLMGMMFGLASENTVAIESWGTKAVVLDKNANVSLSQSLIAPSQLPKLTKHEAELGLVPVVMETVGQKESYKTSLQFVGLKEDQFIAKDKLAITSGHRVQRSNQLVLDESLKDKGYRLGSKVKFGNSATEYTVVGFAKDAKLNISSIAYGDLSVWQSLRGVGNQFVASGIISDQAKPAVTAGLASYSVNTFIEKLPGYSAQNTVFEFMIGFLMVISVIIIAVFLYILTMQKLANYAVLRAQGIPAQRLINATLGQALIMMVVGVIIALLLTVVTGAVLPTAVPMLFNWPLTIGVAVALVVMGVIGALLPVRVIKKIDPLDALN
complement(2205332..2205934)       TetR/AcrR family transcriptional regulator; NUU04_11355                              N/A                 LimosilactobacillusfermentumMPSSTFTNLPDEKRQRIEAALLNEFSNHTLATAQVARIVKDAQIARGAFYKYFDNLTDAYSYMYHLLAAKLGSRDDMKRRHLQTATEYIQRVRDLADTSGRLRNFFVLHYTANEGLLPDPLPAKVKAMMDDQRWSAMMLIHESIKECLVDPENEDLILKRLERVLQVLLKEGETEDVSSNQRDSSREGALRPHRDDGGLN
complement(2206091..2206603)       zinc-binding dehydrogenase; NUU04_11360                                              N/A                 LimosilactobacillusfermentumMLLGDGFEGQLFAQILKARGIHEVTLAGRSEEKLANNREHFGVKTINTTKEELPEAAFDIVVEAVGTPATQEQALAAAARGAQVLMFGVGNPDDKFSVNTYDVFQKQLTIQGAFINPYTFEDSIALLASGKVDPLPLFSHELEFTQVEDFVSGKLGKVSKAIVKVGGEEA
complement(2206785..2207303)       PHAGE_Lactob_CL1_NC_028888: transposase; NUU04_11365; phage(gi971752662)             8.51e-42            LimosilactobacillusfermentumQGKLAKEQRILSRRQQRAKKEHRSLRDSKNYQKQRLLVAKLHAKVMNQRHNFLQQISTALIKNHDLVVAEELRSKNLLKNRALALSISDVGWRTFLGMLAYKAKLYGRQFITINPRNTTQTCRDCGFVMGTNGTDKLTLDDRNWTCPNCGIHHIRDWNAAKNILDKGIAKLA
complement(2207333..2208256)       PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; NUU04_11370; phage(gi588498272)     7.27e-68            LimosilactobacillusfermentumMSTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAGLAQTDFERKVSQRGRKSSLTKNLKHLIEEKIQVQKWSPEQVAHVVGIAYKTVYNWIDQGWLDIQLPDLPDHGIRRHRAKEKRGTFNHGRSIEERPHKVETRQEFGHFEADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQTIERQTGTQVYFAHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDRQLVQINWYLNSRPLKCLNWRTPIEIFLLNLRH
complement(2208356..2209093)       PHAGE_Lactob_Lb338_1_NC_012530: transposase; NUU04_11375; phage(gi226377679)         1.78e-15            LimosilactobacillusfermentumMKSMAKMKYHYGLKMRCYPSDQQKQLIKINSDASRFIYNEMVAINKELMQLRRVKLPIDIVQDRIKQLTMRQNAKQMSNHYQFLEDKRIDSLTKANAIQNYRKAWNAFRKVHATGVPKFHRKSYHWRYQTNCQYPGQKTALLTNGTVCFLDNSHVKVPKIGLLRVAGSQARLLKRICETRIGTVTLTKDSADRFFLSMQLASDESFVKVSKATHGHVGIDLNTDNFLTDSEGNIVPNPRYYRTIKG
2209167..2209631                   PHAGE_Lactob_CL1_NC_028888: transposase; NUU04_11380; phage(gi971752663)             2.35e-42            LimosilactobacillusfermentumMTKEKIKDAIYTRRYIYNFHYHLIWVTKYRNQTFKTEVLSNEMEAILQQVADDNDIVIEKMEVMPDHIHMLISFPPSKAPASAIKALKGRSAYIFLQNHPEIRCSQYWGGHLWSPSYYMGTLGNMSKEVVEKHINDQKYRECQECCVKKETSPA
complement(2209642..2210829)       PROPHAGE_Escher_CFT073: transposase; NUU04_11385; phage(gi26246249)                  1.49e-61            LimosilactobacillusfermentumMNQFNKDIIAALSSDKDITLNEVLRRQIEVAANQFLQNELTAVLGYEPHTRIDQSKDDVNYRNGTYTRTIDTEYGEINLTIPRDRLNKFQNALFPPYVRRTDGLEEMVIKMYSKGVTTREIADMVERMYGHYYSPTTVSNITKRTEHLVEEFHERKFKYSQYVCVFLDATYIPLRRGTVEREAVNVAIGIRSDGGKEVLDYSIAPTENGAAWSELLQGLRARGIKDIQLFIADGLVGLQSAIEANYPQAKFQRCWVHAERNLLGYVRKNDRREIITDFKAIRQAENLQAAKERLADFSAKWESSYKRRIKNLVQMEELFTFFSFPTAIRQAIYSTNLIESFNKSLKKMVRRKEQFPNEGALDRFIMTQVMEYNDKFENRAHRGFKDCHDTLDSMF
2211121..2212407                   PROPHAGE_Staphy_N315: transposase; NUU04_11390; phage(gi15927655)                    1.56e-60            LimosilactobacillusfermentumMTDYIKNILQIKDPNLHFTDVVFENNDGRETQVFIGTVSLKLDRCPHCGFEDTLIKNGHSYQTIKYLSINESCPTMLRIGKQRLRCKNCQDSFMAKTNVVDKYCSIAKAVKHKALTMLESNVSQKDVSKFTGVSPSTIGRLLDSDQALLRFNSRTLPTNIAIDEFRGPQGKYCFIIVDNDTSQIYQILPDRLKSSITHYFDRFSLKERKRVKSVSTDLNSYYQGLVRRYFPNAKLVVDRFHIVSMLTRAFNQVRVAVMKQFDPNTREYRALKNSWRLYLLKSTSLNYTKEYYDRHLRQKVTMAERVGIGLDLDPQLAAGYELLQGAMTALEEHDVDQLMDLLFTKWDVPAPFQTVLKTLRKNSEGVYNATVLPYSNGRVEGINRMIKLIQRTAYGFTNFGHFIARIRLHQMGTEAEKRRRPVQAPDAA
