gi|00000000|ref|CP118625.1|  Lactobacillus johnsonii strain KD1 chromosome, complete genome. 1873159, gc%: 35.00%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
386475..386822                     PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail tip protein; PWA57_01830; phage(gi100054)     1.77e-15            LactobacillusjohnsoniiMINLYTLGQVYIVCGKTDLRKGIDGLATLVKEQFELDPFSGKVFLFCGGRQDRFKALYWDGQGFWLLYKRFENGKMNWPRNQNEVQALSSKQVDWLMKGFAISPKIKNTKAREFY
386888..387115                     transposase; PWA57_01835                                                             N/A                 LactobacillusjohnsoniiMSQENLEKIISQQATTIQNLTDEIKLLREQVAYLTQKHYGKSSEQMSLNGQTSLFDESEAQDDGERPRRHSDYYL
387072..388397                     PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; PWA57_01840; phage(gi26990787)     1.03e-67            LactobacillusjohnsoniiMTESVPDAIQTITYRRQAHTRKRADLLAGFPAEEVHHELDDKHCPNCHHELKEIGAYPIRQELLFIPAQLKRLNHIQHAYKCQYCSQRSLSDKIIKAAVPKAPLNHGLGSPSLIAHTLYQKYELKIPDYRQESDWKKMGLEVSRQMLNHWGLKSSEYYFKPLYDVLKQKLLNRPILHADETYYTVLESETIKTYYWVFLSGKHDRYGITLYHHDPHRSGQVALDFLGNYSGYLHCDMWQAYEQLPEATLVGCWAHVRRKFHEAMPQNASGKCIARQGLNYCNRMFCLEKAWESLDCQTRYQARQEELRPLMQEFFEWCRKNKATVLPGSKLGKAINYALKHQETFEHVLLNGRLELSNNKAERAVKSLVIGRKNWLFSQSFAGATASGIILSLIETAKRNDLDPEKYLNYLLQKLPNEEILDSDALEAYLPWQAKIQKMCK
388471..388860                     PHAGE_Staphy_phiPV83_NC_002486: transposase; PWA57_01845; phage(gi9635722)           1.21e-14            LactobacillusjohnsoniiTKTGRQRQIHYNPNWQYLKEKAKETLQSEEGKRIYGCRKSDVEPIFGHMKSVFGMRRTHLRGKKKVETDVGIMFMTMNLKKYGANKKVKPSNFHFKNKKHRNSLKIMNFCVFISGLKIEFFSRHFSYLF
complement(388878..389063)         SLAP domain-containing protein; PWA57_01850                                          N/A                 LactobacillusjohnsoniiMYNKHGKTIKRNGKRILVRKGVRLEANKVKVVKINGKKFYKVGKSTYIKFRNAKLIISPNN
complement(389177..390505)         PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; PWA57_01855; phage(gi26989833)     4.11e-63            LactobacillusjohnsoniiMMENVPDAAVQTITYKRKAHKRKRADLLESIPAEKVHHELGDKHCPDCHHELTEIGKQPVRQEVIFIPAQLKKLEHIQHAYKCEYCSQRDLTDKIIKAKLPKTPLKHGLGSASLIAHTLYQKYEMKVPDYRQENDWRKLGLDLSRQMLNYWGLKSSDYYFKHMYKLLKQKLLKRPILHADETYYTVLESETIKTYYWVFLSGKHDQYGITLYHHDPHRSGQVALDFLGNYNGYLHCDMWQAYTQLPQATLVGCWAHVRRKFDEAVPQTASDKSLAKKGLNYCNRMFYLEQTWEALNKQERCRLRQEKLKPLMKEFFNWCRQNKATVLPGSKLGKAISYSLKHQETFENVLLDGHLELSNNKAERAVKSLVMGRRNWLFSQSFAGAKASGIILSLIETAKRNGLDPEKYLKYLLEKLPNEKDLESNTLEAYLPWQKEVKILCK
complement(390459..390689)         transposase; PWA57_01860                                                             N/A                 LactobacillusjohnsoniiMSQENLEKIIAQQATTIQNLTDEIKLLREQVAYLTQKRYGKSSEQTPLNGQTSLFDEPDAQDDGERPRRRRSDYYL
complement(390754..391101)         PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail tip protein; PWA57_01865; phage(gi100054)     4.28e-16            LactobacillusjohnsoniiMIRLSDLGQVYIVCGKTDLRKGIDGLATLVKEQFELDPFSGKVFLFCGGSKDRFKALYWDGQGFWLLYKRFENGKLNWPRNQNEVQALSSKQVDWLMKGFAISPKIKNTKAREFY
complement(391098..391274)         hypothetical protein; PWA57_01870                                                    N/A                 LactobacillusjohnsoniiMIEKQQPIVALGHSTKPKKARPPRNNLLLNLKKDDLELNFYSSLDTEIMNKLLEKVLS
complement(391347..392681)         PHAGE_Staphy_phiPV83_NC_002486: transposase; PWA57_01875; phage(gi9635722)           1.08e-108           LactobacillusjohnsoniiMYQNYITGQTTLSLNLDFSIPANHIASVISEFVDSIPNEVILETTSNTGRPAYHPAMMLKILLFAYSRRVFSGRKIERMLEENLPMMILADNRKISYHTINNFRSSDHANKVIKQCFVYFTSLLEDEGLIRENAVFIDGTKIEADANRYTFVWRKAIEKYHAKLKEDVSALYEELINKEVVKAMAEEEAQTSQGLEILAQETEKEVEKLTEKIDREPKAIPGGSKNKAKRRELKKIAHKLRKDFIPRAKKYEEAEEIFAGRNSYSKTDHDATFMHMKEDHMKNGQLKPGYNIQAATTNQYIVDFAPFPNPTDFRTFEPFLDQMKSRGILDKFQNIVADAGYGSEYNYSILEENYSDKNYQIPYTQYEKEQTRKYKKDPSKVDNWYYNEEEDYYVDKSGVRFNFKYYSQRKDRSTGMVRNFKIYEADEFQLTEELTQLAKTKSKRQ
392989..394107                     IS4 family transposase; PWA57_01880                                                  N/A                 LactobacillusjohnsoniiMHIHDYIKNPHAFTRKRKLDAFTTIKTTINMQNNCLTKEIDDAFDDGSFAGNNNISVSAYIQQKSKLSPKCFEHIFHAFTRQLPTKAQLDHKYRLFAFDGSDFNQVWNSKSKNIVDSSKGKSYCQIHVNAMYDLLNNTYQDCVFQPKSQMDERGAALDMLRQLDYSQPYIVMMDRGYESFNMIENCNRLKNCYYVIRTKIGQGGIKEIKNLPDEFCDKNISCRITISNHYYTLHHKTENLHIVFHPKHHYKKKFAKGTQDARWDFEDFCNVNFRACKIRINDPDTNKEEWEILVTNLDRQEFPLERMKELYHLRWGIESSFRKLKYDLGSVQFHSKQDHFIEMELYAHMIMFNAVRLLYKHMYHSITVNIIT
complement(394541..395520)         PHAGE_Staphy_phiPV83_NC_002486: transposase; PWA57_01885; phage(gi9635740)           1.76e-20            LactobacillusjohnsoniiMNQRIKGKHLSFEERVIIQTRIKDGFSLRAIARELGCSPSTISYEVKRGTVSLYHGKQSRYKADHGQSVYQANRYHCGRKSDFLKKSDFIEYVNKHFSEDDWSLDVCANRSLAIGEFSSNQTVCTRTLYNYVDQGLMDSRNCDLPEKLKRNTKIHRIRKNKRKLGRSIEERPQEINDRKEFGHWECDLVLGHKTRDDQVLLILSERMSREFLEHFKNNTASTGTTSSRQSLLIMARSSRILISKSLKRLFTMLIHILLAIKALLKDITALFVGSYLKVITSITILFKTSLILKPGAIHCRERSHITPQMKSLKRNWIVSIKQHAA

#### region 2 ####
413208..413555                     PHAGE_Stx2_c_1717_NC_011357: transposase; PWA57_01940; phage(gi209447152)            4.28e-16            LactobacillusjohnsoniiMIRLSDLGQVYIVCGKTDLRKGIDGLATLVKEQFELDPFSGKVFLFCGGSKDRFKALYWDGQGFWLLYKRFENGKLNWPRNQNEVQALSSKQVDWLMKGFAISPKIKNTKAREFY
413620..413850                     transposase; PWA57_01945                                                             N/A                 LactobacillusjohnsoniiMSQENLEKIIAQQATTIQNLTDEIKLLREQVAYLTQKRYGKSSEQTPLNGQTSLFDEPDAQDDGERPRRRRSDYYL
413804..415132                     PHAGE_Stx2_c_1717_NC_011357: transposase; PWA57_01950; phage(gi209447153)            3.90e-45            LactobacillusjohnsoniiMMENVPDAAVQTITYKRKAHKRKRADLLESIPAEKVHHELGDKHCPDCHHELTEIGKQPVRQEVIFIPAQLKKLEHIQHAYKCEYCSQRDLTDKIIKAKLPKTPLKHGLGSASLIAHTLYQKYEMKVPDYRQENDWRKLGLDLSRQMLNYWGLKSSDYYFKHMYKLLKQKLLKRPILHADETYYTVLESETIKTYYWVFLSGKHDQYGITLYHHDPHRSGQVALDFLGNYNGYLHCDMWQAYTQLPQATLVGCWAHVRRKFDEAVPQTASDKSLAKKGLNYCNRMFYLEQTWEALNKQERCRLRQEKLKPLMKEFFNWCRQNKATVLPGSKLGKAISYSLKHQETFENVLLDGHLELSNNKAERAVKSLVMGRRNWLFSQSFAGAKASGIILSLIETAKRNGLDPEKYLKYLLEKLPNEKDLESNTLEAYLPWQKEVKILCK
complement(415208..416272)         PHAGE_Stx2_c_1717_NC_011357: transposase; PWA57_01955; phage(gi209447153)            7.58e-27            LactobacillusjohnsoniiMMENVPDAAVQTITYKRKAHKRKRADLLESIPAEKVHHELGDKHCPDCHHELTEIGKQPVRQEVIFIPAQLKKLEHIQHAYKCEYCSQRDLTDKIIKAKLPKTPLKHGLGSASLIAHTLYQKYEMKVPDYRQENDWRKLGLDLSRQMLNYWGMKSSDYYFKYMYKLLKQKLLKRPILHADETYYTVLESETIKTYYWVFLSGKHDQYGITLYHHDPHRSGQVALDFLGNYNGYLHCDMWQAYTQLPQATLVGCWAHVRRKFDEAVPQTASDKSLAKKGLNYCNRMFYLEQTWEALNKQERCRLRQEKLKPLMKEFFNWCRQNKATVLPGSKLGKAISYSLKHQETFENVLLDGHL
complement(416226..416456)         transposase; PWA57_01960                                                             N/A                 LactobacillusjohnsoniiMSQENLEKIIAQQATTIQNLTDEIKLLREQVAYLTQKRYGKSSEQTPLNGQTNLFDEPDAQDDGERPRCRRSDYYL
complement(416521..416802)         PHAGE_Stx2_c_1717_NC_011357: transposase; PWA57_01965; phage(gi209447152)            3.33e-10            LactobacillusjohnsoniiMDGLATLVKEQFELDPFSGKVFLFCGGSKDRFKALYWDGQGFWLLYKRFENGKLNWPRNQNEVQALSSKQVDWLMKGFAINPKIKNTKAREFY
complement(416865..417041)         hypothetical protein; PWA57_01970                                                    N/A                 LactobacillusjohnsoniiMIEKQQPIVALGHSTKPKKARPPRNNLLLNLKKDDLELNFYSSLDTEIMNKLLEKVLS
417197..417346                     PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; PWA57_01975; phage(gi30043988)     9.11e-05            LactobacillusjohnsoniiMEKISVIIPVYNDEEYLAQCLDSVLRQTYSNLEIILVDDGSTDSTPRIM
417312..418076                     PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; PWA57_01980; phage(gi30043988)     1.76e-08            LactobacillusjohnsoniiMDLQIVPPELCEKYREKYANIRILHKKNGGVGSSRNAGLEMATGEYVLFVDHDDLLSETHIEELYKLLKKNDADIAVGNFNHFIEEKRAYGIWLKEDDYFEKTYTPEEWFTVEYETVPYNMSIIFAVPWAKLYKKSLFENIVYPINARVEDDLTTWKIYLLADKIAYMNKAIYTHRIFENSVSAQANKTAVFPLEAVEERISLLSQLGFDITTEIEAYCYRLNICIDTALKDGDYLKYRNAKQKMAILKKYKKI
418159..419561                     PROPHAGE_Escher_MG1655: IS150 transposase B; PWA57_01985; phage(gi16131429)          4.70e-56            LactobacillusjohnsoniiMTKYSTELKIEIVSKYLNHEDSIKGLAKQYNIHWTLIRRWVDKAKCQGLAALSVKHTKTTYSSDFRLNVVRYYLTHSIGVSKVAAKFNISDSQVYNWAKKFNEEGYAGLLPKQKGRPRKVPKKSKKTTKKLELSEKQKYEEKILKQEAELERLRVENLGLKKSGCPISTLSNKQKTQLIQDIRAKHHQIKLKVLFKVLKLNRKTYYDNVKNRINQADKYALVKEKIQEIYYGYEGQETYGYRPMWGALRDEGFKFSLETVRKLMRSLGIKTTIYHKNTGKYSSYKGNVGKKAPNILNQTFDETIPYKVLHTDVTEYKLTNGKKVYISPVVDEASLEILACAVSYSPEMKTIYNMLDELADNLPPGAAPILHSDQGFQYQNPGYQARLKKMNIIQSMSRKGNCHDNAPGETIFNLMKREKLNRLKIGSLEEMKEILKDYIYWFNNVRRSNKLKYTTPVKYRNRVLSNL
complement(419616..420629)         PHAGE_Lactob_SAC12B_NC_048754: portal protein; PWA57_01990; phage(gi100153)          3.76e-18            LactobacillusjohnsoniiMTVHITNINGMAINSVAQNAQNMVVDFAKQLGMNEFGIYVYHWKEEPLQARSTRFDGIIASLNGGDTVIFQSPSWIAIEWDQALIDHINLYPNIKKIIFIHDVIPLMFEVNRYLMPQYIDYYNKADVLIVPSKKMYDLLRENGLKEKPYVVQHFWDHPATVNYFITPENNKVINFAGNADKFDFVKTWNCQNIKLKVYSDPENNDSEHNVELTGWKHDPVLLEELRQTGGFGLVWSEEPYWSEYMKVNASYKLSTYLAAGLPIIVNSATPEAEAIKNKHLGIIADSLDEAQAKVLQTNNEDYRQMIDSVNNFGSLIRNGYFTKKALVDAVVKAQYNN
complement(420913..422262)         aminopeptidase C; PWA57_01995                                                        N/A                 LactobacillusjohnsoniiMNKEITNDLINNFENDFNSSKANKIAARAAQENGIFKASQNLQTKIDLDPTFSIEIDTGKVANQKQSGRCWMFSALNTMRHSIQKNFKIKDFELSQNYTNFWDKFEKSNWFFENVIATADKDLGDRKVAFLFATPQQDGGQWDMLCGIIEKYGIVPKKVYPETANATNSSALNDTLNTLLRKDGLELRKMVQDGKSEEEVQERKNEMLKEVYRILAISLGVPPKTFDFEYKDDDGNYHRDAALSPQDFFKKYVGWDLSEYISTINAPTKDKPFHKVFSVEYLGNVEGGRQVRHLNLPIDEMKDLIITQLKNGEVVWFGSNVVKDSERQAGLLDTELYKRDDLFDVDFDMSKADMLDSGESLMDHAMVITGVDLVDGKPTKWKIENSWGEKPGFKGYFVMSDSWFDKFVYQAVINKKHLSDDLKKTFEEGSKDPIQLLPWDPMGALANNY
422459..422749                     hypothetical protein; PWA57_02000                                                    N/A                 LactobacillusjohnsoniiMRFKKKYLFFSIVGILIAVVLGIFGYEYQKIQSTANTISTNHSLASRQQLKQGKPFSILVLGTDVGALGRGTSYAGNTDTLELITVADCKIKLNTL
422820..423869                     PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; PWA57_02005; phage(gi588498272)     4.71e-49            LactobacillusjohnsoniiMDSLHFTMNQHVKGKHLSFEERVVIQTRLKDGYSIRAIARELGCSPSTISYEVKRGTVSLYHGKQQRYKAEHGQGVYQINRRHCGRKSDFLKKANFISYVINHFFEDGWSLDVCANRSLAIGEFSHHQTVCTRTLYNYVEQGLIAIKNYDLPEKIKRNTKLHHVRKNKKKLGRSIEERPKEIDQRNEFGHWECDLVLGHKTKDDQVLLTLSERMSREFLIIRIPDKTSVSVMQAFKMLQKQYSEHWNDIFKTITTDNGSEFADLANLEEVSKTLVYYAHPYTSCDKGTVERHNGLIRRFIPKGDCINNYSLQQIIDIETWCNSLPRKILAYHTPDEIFERELDRIYQTA

#### region 3 ####
769748..770257                     PHAGE_Yersin_vB_YenM_TG1_NC_028820: NUDIX family hydrolase; PWA57_03710; phage(gi971746323)     3.39e-07            LactobacillusjohnsoniiMRDKGLEEVENFNLAYNENNKNNHKKGAKKMHEYSAGSIVYRIKNNKIEFLLVQSRLNRTWGFPKGHLEKDENNVQAAQREVYEEVGLKPDYDFNFEESITYKIARDRLKTVTLFLSKFNPDQKIKLQKSEIGDYKWATLAEANSCLHYEELKELLKKAQEYIENEISR
770241..770879                     PHAGE_Pseudo_PMBT14_NC_048687: putative transcriptional regulator; PWA57_03715; phage(gi100045)     2.70e-11            LactobacillusjohnsoniiMKYPDKLLAEVKERSRGMKLEGINFGAGPVHPKLMIVGEAPGREEIESLIPFHGASGKELMKSLASIGLKREDVYITSAVRSRPYSIKHTFSKKENKEVIKYPNRKPTKKEIMAHAPFLDYEINCVKPKIIVTVGTTALTRLLDDKYEISNVHGKIIENTPILELNDKKDGYIWSKEKYIVVPQYHPAAVFYNRKLTEIIAQDWLNVKLLIK
complement(770915..771538)         PHAGE_Lactob_phiJB_NC_022775: transcriptional regulators; PWA57_03720; phage(gi571797861)     2.27e-12            LactobacillusjohnsoniiMTEPHANKQLEILRFIYDTVEERAFPPTVREICSAVDLSSTSTVHGHLARLEKKGYILKDATKPRAIEVTEKGREALGIKPKDIPIVGVVTAGQPILAVQDIDEYFPLPPDLENDAGELFMLRVHGESMINAGILNGDHVIVRKQSSANNGEIVVAMTEDNEATVKRFFKEGGYYRLQPENDTMDPIILPVVQILGKVVGLYRNNID
771676..771924                     DUF896 domain-containing protein; PWA57_03725                                        N/A                 LactobacillusjohnsoniiMDKKEEEKLIKRINELTKISRERELTPDELEERKKLRAAFLENFRAGFRQQLEDTVVIDKDGKEVTSEKAKEAQRRKGLRKD
771997..772218                     YneF family protein; PWA57_03730                                                     N/A                 LactobacillusjohnsoniiMNLGLAIFLIIIALLIGLIGGFYGARAYMKKYFQDNPPISEDMIAAMMAQMGQKPSAKKLNQVMNMMKHQQQK
772295..774061                     PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; PWA57_03735; phage(gi9630145)        1.23e-19            LactobacillusjohnsoniiMNIFSKLGWFFKQEKKRYIIGISFLALTSIANLVPPRILGLMADQLDKGSISWGEYGALILAVIAAAIVLYLLRYFWRKQIWGGAAELERQMRSRLFKHFMIMDKTFYQRHRTGDLMAHATNDINSIQNVAGDGVLTLVDSLVTGGTTMIAMIIFTDFRLTIIALLPLPFLALGAWKLGDKLHYSFDKSQAAFSHLNNKTQESVSGIKVLKAFGESEQDSAAFNKMVDDTIQINKKVFKWDSMFDPLGTLIIGATYVITIIYGGLLVSNRTLSVGQLVSFIAYISNMVWPMFAIGYLFNILERGSASYDRVERLLYEKPQITDENADQSLTARDIQGDLKYEIKSFAYPDEKEIPVLQNINFTLKPGQTLGLVGKVGSGKTTIIELLLREFDQYQGRISLGGHDIRNIPLKLLLSEISYVPQNNFLFSTSIEKNIAFSDENVEKDKIESAAQKSDLHDDILQMPNGYKTLVGENGVSLSGGQKQRLSIARALLKESPILILDDALSAVDAKTETSILDSLKSERKGKKTLIAAHRLTSVMDADLILVLKEGKIVERGKHADLLAQNGWYAEMWRKQELQAKVGEVDGQ
774051..774260                     ABC transporter ATP-binding protein; PWA57_03740                                     N/A                 LactobacillusjohnsoniiMDNNEESKSVWSKAIPFKEQVQIFKRVLKYVKPFKVEMGIAIFGAFLVSVINMLLPRGLQFFLDNYLIKQ
774581..775741                     PHAGE_Bacill_vB_BceS_MY192_NC_048633: minor tail protein; PWA57_03745; phage(gi100055)     2.37e-24            LactobacillusjohnsoniiMVNGQKVDDYAISNDMVGFNQLLDDLKQVTKPQIIFEATGVYSRRLQAFLDMHKLRYVMMNPLEAKRKTKDDLHQNKTDKLDALYLAKLQSEHPQRLAYVQSKEYQELMANNRIYEQASHDLITNRNRLHKAIQLTFPEIEHLMVNPRGKNYWSIVLRFPHPDIVLETKEADIIDFLKGLSGIGKKRANDIMQSLIRLAKVACPAVKKDSAHIRGLEMAINNILSAEEACQTALKEMTKLAPKRDLEILTSIPGIGENTALRIISELGDIRRFNNPSQLNAFVGVDPQVYESGNLTAHLSISKRGTAIGRKVLYLAINQIQSAKKAGNPSHIADYYEKRKRSSETASHKKAAIASIHKLLRTIFALIKNDQLYSYDVAKHNQRLLS
775892..777502                     PHAGE_Bacill_SPbeta_NC_001884: ABC transporter; PWA57_03750; phage(gi9630145)        4.15e-26            LactobacillusjohnsoniiVDNTLRVEKATVQIIVWAGLLYGLGTIIKAILQFVYQYLYALGAEKTLESVRKDLYRKLHSLGMRYFDQTPAGSIVSRVTNDTMTLSDFLGVLCQVVIGVFSLVTAFIAMYVTNKFAALIVLLFLPILGFIFWIYTQKSSRLYRAFRERLSRINTNLNESIEGVSLIQQFKQEKRMTNHFENENGTLMRTRFNLIRVNSLLLSPMTSLLYSLALALVLMYFGFPLQETFVPAGIVYAFSQYVQQFFNPISTMMDRMTSFQDGIVAGKRIFRIMDEKEYEPRQENDERAVISKGKIEFRNVSFSYDGKNEILHDVSFVVNPGETLGIVGHTGSGKSSIINVMMRFYEFGSGEVLIDGIDIRKFPKKELRKKLGLVLQEPFMFYGDISSNIRLYNDKITDQQIKDAAKTVQADSFIEKMPGKYHAKVIEGGSELSQGQRQLISFARTLVTDPKILVLDEATANVDTETENLIQEGLKKLRQGRTTLAIAHRLSTIADADQIIVLDKGRIVERGTHEELLKKKGYYYNLYKLQQNSDK
