gi|00000000|ref|JALIGA010000013.1|  Salmonella enterica strain SAC32 130754, gc%: 49.62%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(11854..12141)           PROPHAGE_Escher_CFT073: prophage P4 integrase; MUT85_18015; phage(gi26249391)        9.40e-59            SalmonellaentericaALRVMGYDITKDVCSHGFRAMACSALIESGLWSRDAVERQMSHQERNGVRAAYIHKAEHLEERRLMLQWWADFLDANSKESTSPFEYAKINNPLK
12213..13238                       PROPHAGE_Shewan_MR-1: IS110 family transposase; MUT85_18020; phage(gi24375433)       2.14e-56            SalmonellaentericaMENVALIGIALGKHSFHLHCQDKSGKALQRKKFTRTNLMQFLATCPSTVVVMEACAGAHFMARRISDIGHEAKLISSQFVRPFVKSNKNDFVDAEAICEAASRPSMWFVQPRTEVQQAMRALHRARESLIRDKVKTTNQINGFLLEFGISLPVGDTVIKRLPLVLVEHEIPEYLSRLLMKLHAHYLYLVEQITELESELNQSIKTDDATQRIMTIPGVGPITASLLSSQLGDGKQFSCSRDFAASTGLFAASTGLVPRQYSTGGKSTLLGISKRGDKNLRRLLVQCARSFMMRLEHQQGRLAEWVREQLSKKHSNVVACALANKLARIAWAITTNHNAYQA
complement(13509..13655)           IS66 family insertion sequence element accessory protein TnpB; MUT85_18025           N/A                 SalmonellaentericaMLTPDNVFLTVKPVDMRRGIDTLTQYRQDELRSTWHEGAAFVFVNNLWS
complement(13642..13971)           IS66 family insertion sequence element accessory protein TnpB; MUT85_18030           N/A                 SalmonellaentericaMSKHRWSIEQKRQHVAAWRTSGLTRQQYCELNDIPFKSLREWPKDVAKAERRANDPTILPVQIAPTLQADTPPPVTNEPVTLFIPGGIRMCCHPSQLTDVFRALKYADA
14095..14948                       PHAGE_Rhodoc_ReqiDocB7_NC_023706: tyrosine recombinase/integrase; MUT85_18035; phage(gi593775993)     8.20e-05            SalmonellaentericaQRHLYQYRKRNGAPLTTRTQRTALQPLQVWLHWMTRQNLILANPAADLELPRLEKCLPRYILSVDEVEQVLALPDLTTPAGIRDRVLMELLWSTGVRRSEAAGLDVFSVDANRRILTIVQGKGKQDRVVPVGERALWWVQHYLHQLRPQLLVNPHCKALFVALDVVEGVWGRTASPTSSATIKPPAWLGTGAATCSGTRWRHRCWRMVQICGGYRRCGVMPAWSPRRSIRRCRSGRFRRFTPAHIRQNGKPWMTRDIPFIMTTQTTPHVEGMMSSTIHFRIAGA
14917..15204                       damage-inducible protein J; MUT85_18040                                              N/A                 SalmonellaentericaMSSTIHFRIAEETKRLAMQAAERQQVSLTELMRQRAEELAEEERRYQSSVHEDWLEEQIAQAFSRYDAGEGEYIGHDEMENRMNTLKQQAMRGRL
15201..15506                       type II toxin-antitoxin system RelE/ParE family toxin; MUT85_18045                   N/A                 SalmonellaentericaMTVRVEWEKRAQRDREDIFLYLNREAGDEVAIAADDRLAGMTGILEENPLAGVKAGRLENQRKLVVPHFPFIIVYVAEKEHVRILRVLHTARKIASQSRKR
16256..16519                       PHAGE_Shigel_Stx_NC_029120: LygF; MUT85_18050; phage(gi985761265)                    1.36e-11            SalmonellaentericaMYLAPGLGVFTSDQAFPAWNNKRTKQAKQAKQKELIRQAKSRQEILGDGMCACDRRKNNIGQECRNSEVMQRVLAFYRGNYQEAKSA
16545..16880                       hypothetical protein; MUT85_18055                                                    N/A                 SalmonellaentericaMKDINTLPEAVDKIESLIRQLHDVCVENGVPLVIAALVSRTERDINRFLSLYLDGPAGLTDSSLLATSEILRMRDVPPEFIAWLENVRKEMEEPCECPECCAERAKHPQLH
complement(17102..17380)           PIN domain-containing protein; MUT85_18060                                           N/A                 SalmonellaentericaMIFFKALQAFPPFLPGHIGRGFSAGLAEFSGRTLPVDTAVALRCARLHVSDKRGERDAFIAATALVHGMTVVTRNIADFETTGVAIVNPWIY
17423..17512                       PHAGE_Escher_RCS47_NC_042128: hypothetical protein; MUT85_18065; phage(gi100062)     1.10e-05            SalmonellaentericaMLRATKIRIYPTSEQAEYLNALFLARVIS
17668..17952                       DUF1778 domain-containing protein; MUT85_18070                                       N/A                 SalmonellaentericaMQTTIRKSVRNKQINIRATDEERAVIDYAASLVSKNRTDFIIEKAVSEAQNIILDQRVFVLDDARYQAFIKQLEAPVQNTEGRQRLMDVKPEWK
17943..18425                       PHAGE_Lister_vB_LmoS_293_NC_028929: hypothetical protein; MUT85_18075; phage(gi971756903)     1.49e-06            SalmonellaentericaMEISVTAPELLNEEHYLQQFDCGNDVLSDWLRRRAMKNQYLNASRTFVICPEGTKRVVGYYSIATGSVSHASLGRSLRQNMPDPVPVVLLGRLAVDECTQGHSFGKWLLNDAVTRVSNLADQVGIKAIMVHAIDEQAKTFYEYFGFVQSPIAPNTLFYKI
18740..19166                       transposase; MUT85_18080                                                             N/A                 SalmonellaentericaKYVASKHHRTFMADLKPVSCGVKRSGRNGAGAGGEMGPAVSDSPPVMASQVGKPVGILPLPGEYPQGDLHHKCCRIGTSAVQETDQNQRSFPKKQSVEAALSGTDESTGKMDNANPELEFDIVAVSHLFRATEGDDTVG
19483..19692                       hemolysin expression modulator Hha; MUT85_18085                                      N/A                 SalmonellaentericaMAKTKQEWLYQLRRCSSLKTLEKIISHNQYKLTADDIEAFNSAADHRLAELTMNKLYDKVPASVWKYVQ
complement(19766..20118)           PROPHAGE_Escher_CFT073: transposase; MUT85_18090; phage(gi26250984)                  3.07e-11            SalmonellaentericaSELRNRGVVGVLIAVNGLTGFPVAINSIYPQTEVQLSNRVATPNVHGPENRFTVQWRKRRQKRYWLSWRRNGASSMRSCFCRGGVSGKICQCTSATRRISARFTQSTRNRYIGA
20345..21318                       PROPHAGE_Escher_CFT073: transposase; MUT85_18095; phage(gi26246249)                  2.95e-94            SalmonellaentericaSGINAELTDHPGHEKNAPRKALIPTMAIRQKCCFTMTARQSTHRVTVRIPLNRSFKKDQTRITQMDSQIFSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVTEWQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVVLAPGINRRPEGIPRHVAGRKRRKVLACADRAKSWSEDILIAGVDGLKGFPVAINSVYPKIHIRLCTIHRVRDSQKYVSRKDYKAVTSGLKAVYQAPRWRWMCSRVPGMTNICSSAKAGAYTGKTAIRSSAFRRISVRPSIPRTRECTALSGQPSRNVRYSRRMTQCVRLFAT
21320..21562                       hypothetical protein; MUT85_18100                                                    N/A                 SalmonellaentericaMAMADYVKQQREECLQKDKKVRRQTRVTRRQMTPDEIDPEILAPGCHLVRRCSKQQRVHVPAMRSGEWGHLLRALEIKRA
21633..22589                       PHAGE_Sodali_phiSG1_NC_007902: transposase; MUT85_18105; phage(gi89886005)           7.65e-112           SalmonellaentericaMSKKKNTTTPTPHDAAFRSFLANPDVARDFLELHLPAELRAVCNLDTLKLESGTFVEEDLRQYASDILWSMKTTDGDDGYIHVLIEHQSSDDKMMAFRQMRYAIAAMQRHLEAGHSRLPLVIPLQFYHGERSPYPHSTNWLDCFSNPEVAGKIYTNPFPLVDVTVIDDDDIMCHRRMAALTLLMKHIRQRDLMELLDKLPLLMVEMVSDEQVRVLIHYMVNAGDSPSPEFMRALAARLPQHEDKLMTIAERLEQKGREEGRKEGLQEGRQEGRQEGRQEGAAEKAQAIARQLRNMGMTPEQIKQATGLSDAELKKVIH
22648..22860                       PHAGE_Sodali_phiSG1_NC_007902: transposase; MUT85_18110; phage(gi89886005)           1.03e-11            SalmonellaentericaMTIAERLEQKGRKEGLQEGRQEGRQEGRQEGAAEKAQAIARQLRNMGMTPEQIEQATGLSGAELKKLFAD
complement(22902..23153)           PHAGE_Erwini_PEp14_NC_016767: hypothetical protein; MUT85_18115; phage(gi374531851)     8.94e-06            SalmonellaentericaMTGWELRIWRKGMCWSREKAAREFGVTLRTWHAWENAEQVDVTVWRTTQALSVLDLLPLMHRMRKTDIITRLENELGKTAVGV
23509..24717                       PHAGE_Entero_If1_NC_001954: hypothetical protein; MUT85_18120; phage(gi9630756)      1.33e-173           SalmonellaentericaMKRLQAFKFQLRPNGQQEREMRCFAGACRFVFNRALALQNENHEAGNKYISYTKMTSWLVEWKNATETQWLKDAPSQPLQQSLKDLERAYKNFFQKRAAFPRFKKRGQNDAFRYPQGVKLDQENSRIFLPKPGWMRYRNSRQVTDVVKNVTVSQSYGKWYISIQTESEVSDPVHPSVSMVGLDAGVAKLATLSDGTVFEPVNSFQKKQKKLARLQRQLSHKVKFSNNWQKQKRKIQRLHSRIANIRRDYLHKVTTTISKNHAMIVIEDLKVSNMSRSAAGTVSQPGRNVRAKSGLNRSILDLGWYEMRRQLEYKQIWRGGQVLAVPPAYTSQRCVCCGHTAKENRPSQSKFECQACGYTANADVNGARNILAAGHAVLACGGRVQSGRPLKQEPTEMIQATA

#### region 2 ####
117351..117362                     attL                                                                                 N/A                 TCAGGTATCCGC
122188..123201                     PHAGE_Rhodoc_ReqiDocB7_NC_023706: tyrosine recombinase/integrase; MUT85_18510; phage(gi593775993)     1.73e-12            SalmonellaentericaMYDTNHDKLSSVSHVNDVPPPSEQTFHGELVSSSVSLRYVEDNPAIAYLISLGSKRSRQTMSSFLNIVARMIGFPNLRDCAWSSIRRHHILAVLEMLGDAGKAPATINTYLSALKGVALEAWTMKQLDTDSFQHIKQVRSVRGSRLPKGRALERHEIRNLFYTCENDSSVKGVRDAAILGVLLGCGLRRSEIVALDMESVITREHALRVRGKGNKERIAYVPDGAWQRIMTWVEEVRGEQPGPLFQRIRRFDDVTAERMTDQAIYHILETRRIESGLEKFAPHDLRRTFASAMLDNGEDIITVKDAMGHASVTTTQKYDRRGDERLRKASQRLDIAD
complement(123301..123441)         PROPHAGE_Shewan_MR-1: ISSod4, transposase; MUT85_18515; phage(gi24373869)            2.25e-11            SalmonellaentericaAFNENSLLKLLYLDEKWTMLIQSWNLTLSQLAIYFEGRLNKVMTL
complement(124580..124684)         PROPHAGE_Shewan_MR-1: IS110 family transposase; MUT85_18520; phage(gi24375433)       7.33e-08            SalmonellaentericaAAGLGLTPSQYSSGGKSKLGRITKAGDSYLRTLLV
124726..125289                     PHAGE_Mycoba_Squirty_NC_026588: non-functional integrase; MUT85_18525; phage(gi764159894)     5.09e-06            SalmonellaentericaMAMQHDDYPKYLLAPEVSALLHYVPDLHRRMLLATLWNTGARINEALALTRRRLFAGATISVFAAGPLKQRAEKARLWEITNRMVRTWIGEAVEAAAADGVTFSVPVTPYTFRHSYAMHMLYAGIPLKVLQALMGHKSFSSTEVYTKVLALDIAARHRVQFQMLGADAAAMLKGISWFFLNLIILTR
complement(125298..125600)         ribbon-helix-helix domain-containing protein; MUT85_18530                            N/A                 SalmonellaentericaMRNGANTPPRDEAAFINGGTADLDNAKKSSDKSSVVSKAKPVSISFFEENLKDIDDLITAEMVSGKGRVNRSDVVRAAVEALTTLSKTEISRLIAEAKQR
complement(125613..125822)         IS110 family transposase; MUT85_18535                                                N/A                 SalmonellaentericaSTADDLYLRSLLVQGARSVLIGAEKRTDFSRWVCSLVERRGYWRADVAIAAKNARLCWASLHYGDDFS
125816..126229                     PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfB; MUT85_18540; phage(gi557307549)            8.19e-27            SalmonellaentericaLLKQDFYASGPKQKLGNITYLRTGEGWLDLTVVIDLWRRKRPENVIVHTARGGQYCSADYQALLKRHNLHGSMGAKGCCYDNACAESFFHSLKVECVHGERFIRREIMRTMVFNYIKYDYNRWRRHSACGGLIFAA
126484..127068                     hypothetical protein; MUT85_18545                                                    N/A                 SalmonellaentericaMNLHKQLQNGLSLIEAAMVLALSAIVISGVMFYYNSTQSNYYLNTAEETIIAIQQRVMTLYANRNRIDDALSLSMLHMPGIKTVPDNPNIGVLPGNITFKVEHGWIEDGLLPSDTELGVSNRFYVILSGVTPEQCAVLGGGAYGKSGSFRGAYILSDMSYTNISDLNLKQRLEYCSQNDLKKTIGLIFSLAGSD
127342..127353                     attR                                                                                 N/A                 TCAGGTATCCGC
complement(127583..127735)         hypothetical protein; MUT85_18550                                                    N/A                 SalmonellaentericaMKELSEQGIQFVSGAGAADDEQKIAGMIGGIVNGITGLFGFKDIFVQSVG
complement(128106..129494)         PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; MUT85_18555; phage(gi971757643)     1.92e-11            SalmonellaentericaMMNKNNQIMYSVMPWIASIAFFMQTLDASILITSLPKMADSLNESPLNLETAVICYSLTLAIFIPVSGFVSDRFGTRNIFIFSLGIFSLGSFCSAVSVSLFWLDVSRVIQGIGGAMMVPVSRLVLLKIFDKKQLLTALNRAGLLGLIGPFIGPVLGGYLTDNLSWHWIFLINIPFGILGIMLSLKFMPNIKNDTASNDYAGLVMVSLSFIFITLSLEVIDENNNWLFSFLLFFAGIFSIVMYVIYAKKNSHCENDKSIFKLLLFTIRTFRLGLLGNSLGRMGSQAITFLIPLFLQLVFGYSALSAGLTLTPVALSAIFVKGIIPSVLGRYGYKMCLMFSTVIVGIAIGCLSLVTTHTPVYLIVMTLLLIGGFNSLRFTALSSITLADLPPEQSSSGNSLLSTSQQLAITFGVSLASVLIRLLESNETLVDAFKISFFVFGVITILSSGVFMQLRLKDGSNLI
