gi|00000000|ref|JALIGA010000023.1|  Salmonella enterica strain SAC32 54551, gc%: 52.60%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
42772..42785                       attL                                                                                 N/A                 CTGCGGGCTTTTTT
42902..44098                       PHAGE_Entero_P4_NC_001609: integrase; MUT85_22300; phage(gi9627511)                  1.02e-77            SalmonellaentericaMARTTRPLTNTEVLRTKALEKDLTLHDGDGLFLIVKTSGKKLWRFRYQRPATKQRTMIGLGAFPALSLADARGLRADYLALLANGIDPQVQAEVVEEQQQIALDSIFSTVATNWFQLKSKSVTSDYANDIWRSLEKDVFPAIGETPVQQIKARTLVEALEPIKARGALETVRRLVQRINEIMIYAVNTGLIDTNPASGIGMAFEKPKKQNMPTLRPEELPKLMRSLIMSNLSVSTRCLIEWQLLTLVRPSEASGARWVEIDLDAKLWTIPAERMKAKREHIVPLSPQALDILEVMKPISAHREHVFPSRNDPKQPMNSQTANAALKRIGYGGKLVAHGLRSIASTALNEAGFNPDVIEAALAHSDKNEVRRAYNRSTYLLKRIELMNWWGELIRVSFR
complement(44135..45544)           hypothetical protein; MUT85_22305                                                    N/A                 SalmonellaentericaMKFSESFNMEFQQSNLDFIDIPLDTDLQFFIDPTSIRALKTNWGGSLEKLIQDYFADVLASIKNGDLKRAGILLSSLKESNSFHLGYSSKKSSGKALGVKTAELILDSLKKSKAAQSGLLHDLEDTALTIDGIASDRISDSVCNILKLPFIEYTQKICEFYNVDTSDVSGIRLWDPNSGRWVKRTFKLPIYNGEEVILIPKVLAREKIAYSHSKFYRRYIIPEIRAEHIKAGSALVTLLKGKQTVTAKKIIEEFGQSKGFIEEQIVKYPDAIKQYKEELLLSPPPPLPHKSFDDSTGAVTSPLSSDIENLKLSIKENDEQLYVDSLKKIFLTIFYPSLFYPCLISGNMNDYRFTMLNESRAGFFFDFSVFEIPAEKILVNIVMSSSHINENYLESLTQEMDVIKTSVCLLACCEATNELQKEKIKALAKSKGKYIFIINSVAINGILDEYYKIGEQHFSMLRDKFKELN
complement(46077..46643)           PHAGE_Entero_P4_NC_001609: amber mutation-suppressing protein; MUT85_22310; phage(gi9627520)     2.14e-71            SalmonellaentericaMTTLTLQQAFEACQTNKTAWLNRKTELAAAEREYQELLLDDNASGSRRLQSLRDLIDVKKWEVNQAAGRYIFSHEEVQRISIRNRLHDFMQQNGAELTAALAPELMGIKNQPAMIKNRALDRSASYLREALSVWLTAGNDINYSAQDKDILTAIGYRPDAPSRDDNREKFTPAQNMIYTRRRAGLVAQ
complement(46660..46902)           PHAGE_Erwini_ENT90_NC_019932: transcriptional regulator; MUT85_22315; phage(gi431810990)     2.82e-17            SalmonellaentericaMMRCPFCRTAAHVRTSRYMSESVKESYLQCQNVHCSATFKTHESIFEVIRSPVVDEKPAPVPTAPAPRRVKGCYSSPFRH
complement(46899..47636)           PHAGE_Entero_P4_NC_001609: head size determination protein sid; MUT85_22320; phage(gi9627518)     6.79e-109           SalmonellaentericaMTHTAVIPDYLKPAMERLETARSAHLANASRMDETTTAISQVQTQKNELEQENGNDSGAWRAAFRAGGAVITDELKQRHLARVARRELAQECDSMNEVLSFELDRLKGACDRTARAYRQAHHGVLSQYAEHELDAALRESCGALIRAMKLNILVLNNPLANTTGHQGYIEPEKVVMQQVKAWLEQAVKGCNIRLTDEPVLFKTGLSASTMPHMEHDVAATPVQRKFWQEKMREREADLKARGLLS
48174..48440                       PHAGE_Entero_P4_NC_001609: transcriptional regulator; MUT85_22325; phage(gi9627517)     1.59e-40            SalmonellaentericaMHTAFSSPSSAPAAPLMQVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMTDRIAERNRGYDA
48437..48988                       PHAGE_Entero_P4_NC_001609: putative CI repressor; MUT85_22330; phage(gi9627516)      1.80e-47            SalmonellaentericaMMMTIQQTAPFSGLLLFIVSRYSFPAVAKSAAGRGNPSNLTATPDAPCVFFCVYALVHLLLAQWFHDLCSYRVMVAQAGPTSVGPVSVRAGISTPVWATTTERGNSGGSITCYLTEVALMATILTPSYPQFVFVFAAVRRADRKPRICMLRTVAGDEQAARLSLVRDYVLSFAGRLPVAEVRA
48985..49212                       hypothetical protein; MUT85_22335                                                    N/A                 SalmonellaentericaMRHTTITARDLECLEHMRNVGQLVNELMQVQDCATVRRDPVQQSQLTSVIYLMTAQLDGVVERCNQRWLTGEGNV
49209..49529                       PHAGE_Entero_P4_NC_001609: hypothetical protein; MUT85_22340; phage(gi9627513)       1.35e-65            SalmonellaentericaMKNPLPPVLRAALYRRAVACAWLTLCERQHRYPHLTLDALESAIAAELEGFYLRQHGEEKGRQIACALLEDLIEAGPLKAAPSLSFLGLTVMDELCAHHITAPVLH
49544..51877                       PHAGE_Entero_P4_NC_001609: DNA primase; MUT85_22345; phage(gi9627512)                0.0                 SalmonellaentericaMKMNVTETVKQACGHWSRILPALGVKVIKNRHQACPVCGGSDRFRFDDKEGRGTWFCNQCGAGDGLKLVEKVFGVSASEAAGKVDAVTGNLPPVALEVIAAAEAETEADRKAAAALAVKLMEKTRPASGNAYLTRKGFPGHECVMLTAIHKTGGVTFRAGDMVVPLYDNAGALVNVQLINSDGLKRTLKGGAVKGACHTIEGKKQAGKRLWVAEGYATALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLNGNGQSKAAAAADACEGIVALPPVFGDWNDAFMQKGEEATRKAIYDAIRPPADSPFTTMSEAEFTAMSTSEKAMRVHEHYGEALAVDANGQLLSRYEAGIWKIIPPSDFARDVAGLFQRLRAPFSSGKIASVVETLKLIIPQQDAPARRLIGFRNGVLDTATGTFSPHHKSHWLRTLCDVDFTPPVEGETLETHAPHFWRWLDRAAGGKPEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKSILAEIATMLAGEDNATSATIETLESPRERAALIGFSLIRLPDQEKWSGDGAGLKAITGGDAVSVDPKYKDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVILHFPEQIAPEERDPQLRDKIARELAVIVRQLMQKFSDPMTARTLLQSQQNSDEALSIKRDADPAFDFCGYLEALPDPDGMYIGNANIIPRQPRLYLYHAYLAYMEAHGYRNTLSLTMFGKGLPAMLKEYGLSYEKRRKNQGIQTNLTLREESNADWLPKCDDPIAK
52257..52270                       attR                                                                                 N/A                 CTGCGGGCTTTTTT
complement(52477..52698)           helix-turn-helix domain-containing protein; MUT85_22350                              N/A                 SalmonellaentericaENIAPGGTETIRQRIDSFAAARATTARTLKAPDRKELIIKLRKEGLLNLRKSMDTVAQHPGVSRATAYLYARQS
complement(52726..53265)           PHAGE_Salmon_SSU5_NC_018843: putative repressor of phase 1 flagellin; MUT85_22355; phage(gi410491531)     8.36e-17            SalmonellaentericaMECIAVNDISYGREAEIWPRDYSMLARRVQFLRFNDIPVRLVSNHARIITGYIAKFNPRENLILASDKPKGNNRIEVKLESLAILEELSGNDAFNLSLVPADEFNLQQYTPSRRDYFSICNKCYKQGVGIKIYMKYGQVLTGKTTGVNACQVGVRKSNGNHMQVMFDWVSRITSSDYAE
