gi|00000000|ref|KE347830.1|  Gardnerella vaginalis JCP8017A genomic scaffold Scaffold203, whole 9435, gc%: 37.44%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1640..2952)             PHAGE_Lactob_phiPYB5_NC_027982: putative integrase; HMPREF1577_01331; phage(gi937456185)     1.06e-26            GardnerellavaginalisJCP8017AMSANVTIIPPRKIAGNTVDKHKDKPKLRVVAYCRVSTDSEEQATSYDTQVQHYTDYISRNPLWEFAGIYADDGISGTSTKKRVGFNDMIHDCMSGKVDMVITKSISRFARNTIDCLKFVRQLKDKNIPIIFEKENINTMEASGELLLTIMASLAQQESASLSQNVKLGLKFRYQEGKVQINHNWFLGYTKDDEGNLVILEQEAKVVRRIYREYLEGASLRDIAEGLEKDGIKNGAGHLKWNLSNIKGILQNEKYIGDALLQKTITTDFINHVRIKNDGTEPQYYVKDSHASIIPRDIFFKVQEEMVRRANMFSGEENKKRRVYSSKYALSSLCVCSKCGDVYRRIAWNNRGVRSVVWRCCTRWENGPSACDAPTVQENELQSATVKAINKVFSIPDEVLDTLNNNIREIIAGNNLNEIETVDKKIADKQAILLTLLKA
complement(2949..3359)             PHAGE_Brocho_BL3_NC_015254: gp29; HMPREF1577_01332; phage(gi327409421)               2.06e-07            GardnerellavaginalisJCP8017AMAHIPYGYRIVDGKAVIDEKEAQKVRELFRKFLEFGTISETARAVNINKTHSVISNILKNKTYLGTSLYPSLLDEETFNKVQQLRANNFRKKPRTTELKPLTTTNVTYEIGVIEKKHDDPYRQAAYAYSQIKGGVK
complement(3329..4921)             PHAGE_Bacill_Gamma_NC_007458: site-specific recombinase; HMPREF1577_01333; phage(gi77020163)     1.00e-44            GardnerellavaginalisJCP8017AMKMITKLEAKQPDNSLRKIRVAAYARVSTDSDEQLLSLEVQKEHYENYIKSNPCWEYAGLYFDEGISGTKIDKRESLKQLLKDCENGQIDRIITKSISRLARNTVDCLEIVRKLTGLGIYLYFEKENIDTEHMSSELMLSILSSIAQSESKSISENNTWSIQKRFENGSFVIPCPAYGYKNENKKMIIVPEQARVVKEIFNMALSGMGGKAIARVLTDKKIPTKKGGSWTSTTVNAILNNKTYTGDVIFQKTYTDDSFKRHKNCGEKKQYVIENHHEAIISHETFNNVHELRQKRKLKLNITGGSNKYLARYVFSAKLYCGNCHSRLKKHDRHKKDGAYVVWCCTKHIREIKCCPMKAVKEEYVKLAFLQMLNKLKATSAQILAPFIKSLRNVNSKDGLNKVIELEEKKLKLQEQEQVLNKLLAGGYIEMDSYYLESNQLKTEIETCLKEKLQLSNSLNGNLTHLNEAQKLQRFVSVTEVFSEFKDEDFLDFVDDVVVKSRTEFIFHLKCGLELEEEVKETWHTSHMVTE
complement(4983..5195)             hypothetical protein; HMPREF1577_01334                                               N/A                 GardnerellavaginalisJCP8017AMQISNDAHGLTDVKARAWTKESMQADFCFEIAEKLTVSLFKKGLISEQEKEKISRLNREKFHPFYKELLG
complement(5182..5675)             hypothetical protein; HMPREF1577_01335                                               N/A                 GardnerellavaginalisJCP8017ASASFTKKIKKPSDFILSQGYLIGGGLFMNMEEQRKVKLLRDEGLSYTQIANRMDISVNTIKSYCKRNSLGVIQSTKTQTELCESCSKPIKQNKGRKVKRFCSDACRNTWWNKHTQLVKRQANYECTCLNCTNSFISYGNKTRKYCCHACYIEHRFGGEHHANK
complement(5776..6255)             PHAGE_Clostr_phiCT453A_NC_028991: exonuclease A; HMPREF1577_01336; phage(gi100018)     3.20e-39            GardnerellavaginalisJCP8017AREDELQPLVDAWRSSNPMVTTLWWDVDRAVKQCVHEHVSVRTHNIVFTYKSGFLIIKLPSKRCLYYVKPRVEENKYGGESVTYEGVGSTKKWERLESYGPKFVENITQAIARDILLYAMQTLKEYRIVAHVHDEAIIETDKSVSVQSVCKLMGRTPPWAE
complement(6356..7462)             PHAGE_Clostr_phiCT453A_NC_028991: exonuclease A; HMPREF1577_01337; phage(gi100018)     1.03e-130           GardnerellavaginalisJCP8017AESLGKKEVAKELKTVGKELVEVLRLRQQLAKSSVKKYTVMKNAACMDYRERGMFRFYGANRTGRFAGRLVQLQNLPQNHLPDLAEARSLVKQGNVEALEMLYEDIPDTLSQLIRTAFIPRTGLKFIVADFSAIEARVLAWLAGEKWRMRVFAEGKDIYCSSASQMFSVPVEKHGVNGHLRQKGKIAELALGYGGSVGALKAMGALDMGVREDELQPLVDAWRLSNPMVTTLWWDVDRAVKQCVHERISVRTHNIVFTYKSGFLIIKLPSKRCLYYVKPRVEENKYGGESVTYEGVGSTKKWERLESYGPKFVENITQAIARDILLYAMQTLKEYRIVAHVHDEAIIETDKSVSVQSVCELMGRTPPWAE
complement(7563..8008)             PHAGE_Bacill_PBC1_NC_017976: DNA polymerase; HMPREF1577_01338; phage(gi389060355)     6.15e-47            GardnerellavaginalisJCP8017AYRERGMFRFYGANRTGRFAGRLVQLQNLPQNHLPDLAEARSLVKQGNVEALEMLYEDIPDTLSQLIRTAFIPRAGLKFIVADFSAIEARVLAWLAGEKWRMRVFAEGRDIYCSSASQMFGVPVEKHGVNGHLRQKGKIAELALGYGGSV
complement(8109..8689)             PHAGE_Strept_315.6_NC_004589: putative DNA polymerase A domain; HMPREF1577_01339; phage(gi28876473)     6.08e-52            GardnerellavaginalisJCP8017AIWSATLGLPMSLESVGAVLGLDKQKLTEGKNLIKYFCLPCNPTKVNGGRTRNKYFHDKEKWELFKSYNKRDVEVEMSIQEKLSRFPVPDFLWQEFYLDQEINDRGIGIDPLFVESAIKLDQEVKTHLMSELKHVTGLENPNSVLQMRSWLKEHGLEMESLGKKEVAKELKTVGKELAEVLRLRQQLAKSSVKK
complement(8790..9010)             PHAGE_Bacill_PBC1_NC_017976: DNA polymerase; HMPREF1577_01340; phage(gi389060355)     4.08e-20            GardnerellavaginalisJCP8017AMDLETFSSVNLGKCGVYKYAESDDFEILFFGYSVDGSEVKVVDLAQGETIPEVVLSALTDETVTKWAFNAQFE
complement(9211..9435)             PHAGE_Bacill_PBC1_NC_017976: hypothetical protein; HMPREF1577_01341; phage(gi389060352)     2.46e-18            GardnerellavaginalisJCP8017AIVDKQVKPIMDRSEVYSGCYARVSINFYAFNSNGNKGVACGLGNIQKIRDGEPLGGRSLATDDFTTLEDDDFLA
