gi|00000000|ref|KE557324.1|  Rubellimicrobium thermophilum DSM 16684 genomic scaffold 407583, gc%: 68.70%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
278232..278243                     attL                                                                                 N/A                 CTTCCGCCCGCC
complement(278306..279631)         PHAGE_Entero_EFC_1_NC_025453: site-specific integrase; ruthe_02984; phage(gi725950572)     5.49e-39            RubellimicrobiumthermophilumDSM16684MTKPPEKPKVVRKLRCAIYTRKSSEEGLEQEFNSLHAQREACEAYIASQRSEGWVLVRDQYDDGGISGGTLERPGLKRLLEDIEDGLVDVVVVYKIDRLSRSLADFAKLVEVFDRNGVTFVSVTQSFNTTTSMGRLTLNILLSFAQFEREVTAERIRDKVAASRKKGMWMGGVPPFGYRVENRKLVVDEDAAAHVRWIFARFLEIGSCTVLAREVATRGIRTPRGNRIDKKYLYRMLSNRAYIGEAVYKGESYPGEHDPIIDRETWDRVHAILQESPRKRAARTRADTPALLKGLLFGPDGAAFSPTHTRKGARLYRYYVSQTVLKHGAGSCPVGRVPAGEIEAAVIDQLRAVFRQPEIVAGTWKAARTLDDNITEADARAALQQLDPLWDELFPAEQARIVALLVERVDIGVNGLNLRLRVDGLGSLAREMLTGGIEAAA
complement(279628..280083)         hypothetical protein; ruthe_02985                                                    N/A                 RubellimicrobiumthermophilumDSM16684MNKPDPIPARLAALKTTSTPELKAQWRDLFDSEPPPFNRRYLESRLAYRIQELAYGGLKPETIRRLERLGEELDGGDSKKRSIRADRDRPITGTRLLREWQGVEQIVTVTSDGFEWQGRPYKSLSAIARAITGTRWNGWTFFGLKNHRGRK
280564..281802                     hypothetical protein; ruthe_02986                                                    N/A                 RubellimicrobiumthermophilumDSM16684MTRRIRNFVDRAFSRTVDLELLRRLLDPYLSQIGLDWDGLPEDETERRRRLFDLFARADRRFPARLQFALYNISTLATEAGARILQEIAAEAGVDLLAGLRRGGETDDRRFTPRFIALAAFLDHRPIFDRALGAAAFLAHASKLERDAERADAELRHDDPGVQAAFAEAVRAWFSGRYDGHFCEVHWFDEDDLLRILVLHGTKAETKNVDRDGAEDTVKFREIVQSTLEYDRRRGAIAVGSKSAPDAKKLARIFGEHVLGDAEIFEASAAEELYSLAPLQAAGAPFAFRPDPEGDITHVALREIRIDETARTAAGRLRRSPWTMTLRDTQDAIARLARVAPEIDIAEVRIVHAKIDVTIEVDGSETVVPVTIRPPRTLSMRDHSHERPILEMLEDHDVRRRRPSRRTAAAAE
281750..282748                     hypothetical protein; ruthe_02987                                                    N/A                 RubellimicrobiumthermophilumDSM16684MTSADAARLAALLLQLSDRHPIPAVAGSDLDGVEPRLLRSLRARGILIERADLRDAGDTVIIADGSGGLVEVDPETGEVVRIDDPQSVRHHDIDFAALCREIRKQSGLTGPGPVEIAARIWRLGRHAAGARTAEVCLVRGLRPHRVQEALDRIRGAIAAEIPVVLVSLSACDLPPSALRQIEGARAVLAQAQTLLAHDPDRPFAMAFGQVRLPAPRGGPEARLRIDRTGRRALFDGAELAIEHRDFGAFVLLAEEAADTGGFVSNDRIAAALKAATGHDSNPEQVDRCVHRLRNALRNHAGPRDVPKDGFIERRSRIGARLRLPAEAIGFLD
282864..283457                     Sigma-70 region 2; ruthe_02988                                                       N/A                 RubellimicrobiumthermophilumDSM16684MHPPISPSDLATLLDEADLAARRLHRRLALPEADLDDLRQDLLVDLICRLPGFDARRGSIGAFAGLVLRNQASRIAIRHHRQRRAQGGSVLSLDAPVAGSAEPLGCLLAEADGLAAWQGQDRCPIAEAELRHDLARALADLGPADRSLCARLGTCALADLVGRDGLSRSALYRRLARLRRELAMRGLGGRWDGLRAA
283477..283821                     hypothetical protein; ruthe_02989                                                    N/A                 RubellimicrobiumthermophilumDSM16684MLVMPPTAFAPARPRPLTDIEFCAWVGQALPGDRLEYHRGFLGIDSAPVVSTLPEPDRRRLAALGDAAFRAFEAGLVHLAQLRLGPDRFAYLAIARGRPRNAPVPFARLLAEAA
283821..284339                     hypothetical protein; ruthe_02990                                                    N/A                 RubellimicrobiumthermophilumDSM16684MAVPFPSTGVPAMPHPDNTPHFNDLERLALGDIAALPPEMLLDLQTTALAETARVKRLRDRLEAGIAQRYEGAAAAERTAQGKTSGTVRVEDEGVVVVADLPKKVSWDQDRLAAMAERIRAAGDDPTEYLEIAYRVPERRYGAWPAAMREGFADARSETTGKPVFRLEARDR
284444..285301                     PHAGE_Idioma_1N2_2_NC_025439: putative ATPase AAA; ruthe_02991; phage(gi712913853)     1.06e-21            RubellimicrobiumthermophilumDSM16684MAFRIITADERLSAAENKTSMAIFGPPGVGKTTLLKTLPAEETVCLDLEAGMKSVQDWRGDSIPVRSFTDFRDLVVLIGGHDPAQHPQSWYGAEYHAWLQQQYLGTGIEDFLARKRIVFVDSITDLTRQAMAYARQQPEAFSERTGKPDVRGAYGLLGREVIQALKHLQHARGKTVIFVGVLEKVTDEFGATTWQPQMEGTKAGRELPGIVDQVVSMQLFGRDAKGDWTLDETSAERRLVCRSGNPWGLPAKDRSGRLDTTEPPDLGALIAKIDGRAPAHSAKPS
285324..285974                     hypothetical protein; ruthe_02992                                                    N/A                 RubellimicrobiumthermophilumDSM16684MSYDLNDAQPQMAPIGELIPDGTFAKVRLTVRPGGVDGATPMDARLLKASQSSDAKMLDCEFTILEGPHARRKFWQSFTVAGGKVDEKGQSIGWKISKSTFRAMVDSALGLDPRDESPDTKAKRVLPGLKHLDGIVFAARIMVEPASNPQYRDQNRIANVVLPDEPQHAAIMRGETVPPEPVNAPPRKAASAPAPGWQAPTPAWGAQPQAPAAAPAW
complement(286075..286148)         hypothetical protein; ruthe_02993                                                    N/A                 RubellimicrobiumthermophilumDSM16684MPVAGAPPGADGEDAGGCWAGGCCG
286250..286480                     hypothetical protein; ruthe_02994                                                    N/A                 RubellimicrobiumthermophilumDSM16684MTPDEWQAHVTREAALEIGRWLEARGRLHAPIASLGLGDLEAMASNAISRWIVLQSEKLQRAGWPPEDPIGSFLLG
286438..286848                     hypothetical protein; ruthe_02995                                                    N/A                 RubellimicrobiumthermophilumDSM16684MAARGPDRELLARVALCAVCAREARGFGYCHGLRWDRHPYHRFCSRRCQDVGSTIARRNNGMIDKTAREAQAIRDARTHFAEALTDLGLMEPFFHRSAQDIDRLIEAAVTGYIDSMQDQAARKERTGTVLDDPLPF
286861..287283                     PHAGE_Phage_vB_EcoP_SU10_NC_027395: HNH homing endonuclease; ruthe_02996; phage(gi849255943)     7.70e-34            RubellimicrobiumthermophilumDSM16684MTNGEIWRTVPSAPDLLVSSEGRVMLAPYRGPMPKGGERSYGGTPTFGVWNKQDARFIIVVRGTTYKVARLVAEAFHGPAPFDRAVVMHLDENAANNRADNLAWGTQRENLNAPGFLEYCRGRTGDRHPVAVGKRRRARS
287280..287495                     hypothetical protein; ruthe_02997                                                    N/A                 RubellimicrobiumthermophilumDSM16684MIDLNEDTASCSWKPLLEAATENAVTDFEIEFCDSLREKLARFGDSARLTDAQFHKLTCIAQAGGFWERER
287492..288061                     PHAGE_Idioma_1N2_2_NC_025439: putative Cas4-domain exonuclease; ruthe_02998; phage(gi712913847)     4.62e-09            RubellimicrobiumthermophilumDSM16684MIDLNHGSGFLYGAGAPRPPIAQAVSAAIDTALSARNRAERPRTYVSSSGLGRDCLRQIQYDFLAVPKDEGQEFAPRTLRIFEAGHRAEDIVAGWFRIAGFDLRTERPDGRQFGFEALGGRFKGHIDGCFVSGSVSMDYPALWENKALGAASWKDVVKRGVSLARPVYAAQIALYQAYMDLRPRRSSQR
288073..288279                     hypothetical protein; ruthe_02999                                                    N/A                 RubellimicrobiumthermophilumDSM16684MELHAELVPFDAHLAQEMSDRAVAVVRASEAGEWLPRAAAEPTAVLCRGGMAAGKWHAPCAWAKRCWG
288286..289035                     PHAGE_Pseudo_Noxifer_NC_041994: hypothetical protein; ruthe_03000; phage(gi100262)     5.08e-06            RubellimicrobiumthermophilumDSM16684MIPDAYELKRIVRAHRDRSWCSDLLRAAEFAPIYFFDDQASFDGDSVDRAMTRVLTGQLRLPHPSVIFEVREQRASPSGLIVCARADGDIVEATFLMRKRAPRGWTDCLVRIWMHPDGKTEIEGNPAEQSDETVRGHGEVAAGIVWRALTILGASPDIRDRKVSLAERSRLSREGVRGWVWRQVAIDPERLRAATPPQGGSHASPRWHIRRGHWRQLADGRRVFVRQCEVGDPTRGGIVKDYAVEMPHS
289032..290351                     PHAGE_Sinorh_phiM7_NC_041929: putative virion structural protein; ruthe_03001; phage(gi100294)     3.48e-76            RubellimicrobiumthermophilumDSM16684MTEFTPSATQAAAIREIKEWFETRTEQQQVFRLFGYAGSGKSTVLKFALEELGLSPHRSAKDGRCVPGVVTATFTGKAALVLTRKGTPARTIHSLIYSVIESTEEEIEEAARKIALAERDALRLTGFARTTADAAIEAMRQGLSAMKHPRFALNPQSDAADARLIVLDEVSMVGEEMARDLMSFGKPILVLGDPGQLPPIRGEGAFTRDEPDVMLTEIHRQAAESAIIRLATMAREGRPIGFGVYDDHVAKLRKGDITPEQALRGGQLICGLNATRLQINNAMRAAAGLGGTWLPTGPAEKIICLKNQNDLGLINGMFVTLEDIVDEGSLYFSAVVHDEDGRRIGEPYEDGRPGRLRIYKGHFEDHVAYDDKRHDRDYKEKRLLTEATFGWAITAHKAQGSQWENVIVWDDGLGRTEIDRRRWLYTAITRAERGLVLLA
290360..292954                     PHAGE_Staphy_StauST398_2_NC_021323: virulence-associated protein E; ruthe_03002; phage(gi509139907)     3.77e-62            RubellimicrobiumthermophilumDSM16684MIDLNDIAVAKTRHDLAAVKERLACTAADWLPGLFPEARLARDRRSLRCADLSGRRPRKEGSCTIHLDGPYAGWGFDYATGERAGPIDLIAQATGLCDGALFDEAARLAGMDFPAPRTAPAAPLRARPDHSSEIARLVDGAVPLAGTLGETYLRARGLSDPGSPDLLFHPDLPDFDSCRGWPGLIAILRLPGGERAPGIHRTFLLDDGSAKAPPGKKMLGSVKDAVVRLFPMPEDGHIGIAEGIETALAAHALFGTSVWAALSADGLARFQWPEDTRRITIYADAGDAGRQAAATLSDRLNRADIPNEIVAPLHGDDFNDDLLRGARAEDYARGTDAAAEPQTEDPVDAETATPVVASADDPATLIAAAEALTNPPEFEALSTLLGRIALAKLDPLPERQVIARIKSATGIGMSVLTQQLAELRRRVNATGDPHAPIPKPAWFRRLRLDLAGAPERNEANVIVALTSDPAFAGVLAFDEFGQEIVVRQPLPWDGVATSLPRPWEDADDIRTAEWLQLRGINVAPVVVSRAVGAVARELRIHPVRDWLDTLKWDGTSRIETWTSAYLGAEPTAFHHTIGALWLISAVARIYRPGVKADHMLILEGPQGARKSTAIKVLAGEDWFTDELPELGSKDAALHMQGVWIVEIAELDAIGRAEVSRIKAFLTRTTDRFRPPYGRYTVEVPRQCVFAGTVNPDTYLRDETGNRRFWPLRCGAIDIAALARDRDQLWAEAVHRFRAGAIWWIDDPALLAEAREEQDRRYQSDAWDDLIEHWLTHEIRTVSDGFPDYGNSRTESVPRPEPLKDVSVGEILEEAIGLEPARWTRGDQMRVSAYLKANGWERYRRRDEGGREAPREWRYRTRPAE
292372..292383                     attR                                                                                 N/A                 CTTCCGCCCGCC
