gi|00000000|ref|LN870292.1|  Pseudomonas aeruginosa DK1 genome assembly Pseudomonas aeruginosa 6212531, gc%: 66.57%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(682357..682671)         PHAGE_Burkho_AH2_NC_018283: excisionase; PADK1_00628; phage(gi399529070)             5.17e-08            PseudomonasaeruginosaDK1MQPTIAPTTPIPRQETVELVYRIFGDVLVPLEQVRERWFRNLNKENFSKALACGRIALPVTTLDDSHKAMQFVALDHLAAYVDQRANQAGSARRAQPGADSIAS
complement(682771..683541)         PHAGE_Pseudo_phi2_NC_030931: hypothetical protein; PADK1_00629; phage(gi100019)      6.15e-94            PseudomonasaeruginosaDK1MDKSTQIPPDSFAARLKQAMAMRNLKQETLAEAAGVSQNTIHKLTSGKAQSTRKLIEIAAALGVSPVWLQTGEGAPAARSAVSVADGSPLVLEPLHPWDSDTPLDEDEVELPLYKEVEMSAGAGRTAVREIEGRKLRFSYATLRASGVDPSAAICAQLTGNSMEPLIMDGSTIGVDTATTHITDGEIYALEHDGMLRVKFVYRLPGGGIRLRSFNREEYPDEEYSPEDMRSRQISMIGWVFWWSTVRHRRAPSLVR
complement(683626..683796)         hypothetical protein; PADK1_00630                                                    N/A                 PseudomonasaeruginosaDK1MDGAPALQVPERFPIAPAPKQSAPASSVTDNRVRPCTHVKSLKGGWEVVELTPSAF
683999..684199                     PHAGE_Pseudo_YMC11/02/R656_NC_028657: DksA-like zinc finger domain containing protein; PADK1_00631; phage(gi966197900)     8.86e-11            PseudomonasaeruginosaDK1MADLADHANELVLARLDGLLAARPALAIRESAEDCEDCGEPIPQARRRAAPGCSRCIDCQDRHERR
684247..684606                     hypothetical protein; PADK1_00632                                                    N/A                 PseudomonasaeruginosaDK1MIKAIDEMLKLWAEEMHAPGSNGGGYAGGNLIAMLIASKGEVVRGHRGSRVILDRVAEVDRLVNRLPEELKTVVVEHYLNRDSFPEQKYRHCGCSRNTFYLRLHVAHQGIQDGLLRRVA
685065..685412                     hypothetical protein; PADK1_00633                                                    N/A                 PseudomonasaeruginosaDK1MGNEPQTLTEMPLWVLILLAALGGVSGEMWRADKAGLGGWALLRRLALRSGASIVCGVAVMLLALACGAALLFAAALGSLTAAAGAEIAVGLYERWAARRLGGCELPEEEPHERT
685428..686057                     PHAGE_Pseudo_MD8_NC_031091: prohead core protein protease; PADK1_00634; phage(gi100061)     7.61e-55            PseudomonasaeruginosaDK1MKLTEQQLLRIFPNARLVAGVFVAALQRAMDEREIDTPARCAAFLAQVGHESSQLTRLVENLNYSAQGLAATWPSRYLGPDGQPNALALRLARNPQAIADNTYATRNGNGDEASGDGWRFRGRGLLQITGRANYRLVGEALGEPLEAEPWRLEQPVPAARSAAWWWAGHGLNELADRGEFAAITRRINGGLNGQAERLALWQRARAVLS
686054..686416                     PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; PADK1_00635; phage(gi966197840)     1.71e-17            PseudomonasaeruginosaDK1MSRLALLLPAVLLVLLAGALLGGGLVARHYRPQLEEALGQLTASRVASGQLEALLDEQQRALAAVRASAERRAKDAEQALGEARAQAAEQYAAAVRLLQEPDIGVDCQAAGAAIDRELGL
686413..686670                     PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; PADK1_00636; phage(gi966197838)     7.57e-24            PseudomonasaeruginosaDK1MTRLLLGLCLLFAGCAASPTTPRPVRVEVPLAVPCRVPDVRPPSWASATLQAGDSLQAKVRALLAERRQRQGYELELQAALRACR
686986..687480                     PHAGE_Pseudo_D3_NC_002484: putative major tail protein; PADK1_00637; phage(gi9635608)     1.22e-70            PseudomonasaeruginosaDK1MSILTQGTQIYALVPPVSGTGAATVLEIEGVTSFNPGGNPADQIEDPCLSDTSRKYKKGLRTPGQATLGINADPRLASHVRLFQLSEKDGETSVKWAIGWSDGIDVKPTVSTEGDDFVLPPARTWFTFEGYVSDFPFDFASNTLVATQATIQRSGAGKWTPKSA
687492..687839                     hypothetical protein; PADK1_00638                                                    N/A                 PseudomonasaeruginosaDK1MNLNELRAAGGFIESALVRKEISWTRVPAGRKKAVSDTFQVFVRRNSFGAVERLFSAEGDLQSRNARYLAECIRLGETGEESLTYEQAYDLDPALGFLLLQAVGEVNRVEDAEKN
687869..688123                     PHAGE_Pseudo_PMG1_NC_016765: hypothetical protein; PADK1_00639; phage(gi374531663)     3.72e-16            PseudomonasaeruginosaDK1MLNGVGGSTIAEAKERLSYAEYRAWVAYLNKRGSLHPGHRLELALARIAALLGHALGADADPDAFRPHMALQPLSLHQAMDQWA
688170..690008                     PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; PADK1_00640; phage(gi966197865)     2.37e-36            PseudomonasaeruginosaDK1MATNTDGSLTLDLVLRSEGYRAGMDKVGRINDQKMRAMEARAEKAGKAIGKSLDSSALIASSVLDQALDMLGRTSRQAGQAKKPVQSAQDKVLAEWKTRQKELGEAWKSYREPLQDLSKLNEALLKNSSDKLDKALLNLSETGKLSLANVGKAAYADAARLASRQMTLMLLDGLFGWVASVGTEKPKVDDKAGKGQAKAGDDEKEQPSLQSQVFKQWLLQMNSVWGAYRAPLQDISGMTDELFRNASEKLEKSLFNFATSGKLSLSNFAKTVIDDVARIAARQLSMLALDGLFGWMNGKAGITEAQLASQKPYTSLLEKARADAGQAAAGAPAAQGAAPMPAAAMDVGAMVATASGQTGDGSKVSAGGASASAGKPVGSWVEQMDASWASLRDQAQDVSGMMDMLFTNAFTNMENALFTFATTGKLSFKDFADSVIQDMARIAARQATLQIIGGIVGAVSGFFGSGATAGSRISDYTGSDMANWVSKQRAGGMPGFARGGAFNDGIQSAPALFSMAGGRPALIGERGPEAIMPLSRGSDGVLGVRALGGGEGGNVFNFSTSVSLGGGREGAATASGDDGTGQQLAGMINDAARNVVAQELRPGGLVWRMVNG
690001..690342                     PHAGE_Pseudo_YMC11/02/R656_NC_028657: minor tail protein M; PADK1_00641; phage(gi966197864)     2.40e-21            PseudomonasaeruginosaDK1MADLERFTWDISIDSAGQANQLVRQVQYGGGYSQALGDGLNNLSETWQVSRTGDLALIGPIRDFLKRHGGYRSFLWTLPTGEPVRVRAQGWQLRPRGNGVFTLNTTFQQVFNP
690350..691045                     PHAGE_Burkho_phi6442_NC_009235: gp18, phage minor tail protein L; PADK1_00642; phage(gi134288683)     2.57e-82            PseudomonasaeruginosaDK1MTITADDQALEPGALVRLFDLDCTGFGGEMLRFHGHLQQGPIHWQGNAYQAWPLEARGFEQRGDGRASSPTLSVGNIDGSISALCLFFDGLVGARLTVRETYAHYLDAANFAEGNPQADPSQERLNIWFLEQKTAENSVQVTWELSAPPDFQGQQIPARQITSLCHWCITNEYRGQDCNYTGTAMFDADGNPVDDPALDRCGGRVSDCKLRFGADNPLSHGGFAGAGLVRM
691048..691818                     PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; PADK1_00643; phage(gi966197862)     6.68e-89            PseudomonasaeruginosaDK1MELSRSLQRAIAAHAAREHPRECCGLIVRGVRQRRYVACRNAAGSPSEHFVIDHQDWCAAEDQGEVLAIVHSHPDVPATPSMADRVSCELHGLPWVILSWPEGDVAHLAPEGYRAPLLGREFAHGVLDCWSLCRDWYRREAGLELPDYPRRDGWWETGESLYEQHYAAAGFRPVPLAGIRRGDMLVMQVGRALHPNHAGIYLGNDWRLDSEPVQALGGDGPFLLHHLYGRLSTRDVFGGPWIERTRLVLRHTQMPQ
691873..692475                     PHAGE_Edward_eiAU_183_NC_023555: putative tail assembly protein; PADK1_00644; phage(gi589889267)     4.24e-68            PseudomonasaeruginosaDK1MSDTLSQGLTTIRLYGVLGKRFGRMHGRLLESGTVREAMSALKHTMEGFETFMREAESKGLTFAVFRGRTNLSGEQLDMRGREDIRIVPLVIGSKQAGLFQTILGAALIVVGGFTTFFSGGTSSFLVTVGVSMLAGGVMQMLSPQPKGLKGREAPENAPSYAFGGPVNTIAQGHPVGVLYGKRRIGGAVISAGIYAEDRL
692534..696202                     PHAGE_Pseudo_YMC11/02/R656_NC_028657: hypothetical protein; PADK1_00645; phage(gi966197849)     0.0                 PseudomonasaeruginosaDK1MNKTITGHKGGSKKPRQPVEMPDSVRSIARAKILLALGEGEFDGGVDGRSIYLDDTPLLAADGSVNFPGVTWEFRPGSVDQEHIAGVPAVENELAVGVELKSDAPWVRAVNNTQLSAVRLRLSWPAIQRQQENGDVVGYRIDYAIDIAVDGGAWQEALKASLDDKSTSRYERSHRVDLPEARSGWQVRVRRLTPNQNNNRIADTMRVEAITEVIDAKLRYPNTALLFVEFDASQFQSIPQISVEARGRRVRVPSNYDPQTRSYSGTWDGSFKSAWTSNPAWHWYDIVLHKRFGLGRRIDASMVDKWSLYRIAQYCDQSVPDGKGGQEPRFSCNLYLQSRAEAWTVLRDLAAIFRGMSYWSGAEMVAVSDMPEDEAYTFSPSNTVRGDDGSHFNYSSSRQRDRHTLALVNYDNPGNGYQSQPVAVNNDRAQRRYGISQLEITAIGCTSEGEAQRRGQWALLTEELEQDAVTFRTGMDGRGLAPGKIIAVADPVKSGKQIGGRLSAVDGRALTLDRDVEARPGDRLLVNLPNGKAEARSVQSVVGRVLSVTASYSETPRPQGQWALQSNSLTTQRFRIMSITRPEDNLFEITALQHNASKFDAIDNGARIELPPVTSIPPGVQAPPQNVRIKAFTKVDQGLAVTSLSASWDAAPNAVAYEAEWRKDSGNWVRVPRTSALGFDVPGIYAGRYLVRVRALNVMEVGSVYASSEETALEGKTTPPPALAYLRCVAGPWRIGLEWGFPASGAADTAYTEIQQSATPGGSEETARALGLFAYPGNTHLVSPIPAGERLAFRGRLIDRSGNVGAWSNWVTGTSSSDASEYNQLITQEYVESALGQQFFSDIERMQVDIGGLQKQVGDLADILLYDPAKVYAKNDMVRQGQRLYQALKAVPAKTAPPNAAYWSDIGQSLETANGLAQQVASHTAEISELDGSLTAQASRLGVLQAATRDDADDGNGAMADALRGWKAVARAAQEETVRATENEAQATRTTLLEARTADAEGRIATVERVATSDRQATAQRLDQLSASIGGTAASLQSEQTARANADSVLAQRIDTVQASTDTNSAAIQTTSQAVTSLDGNVKAMYSVKLQAHANGQKYAAGWQLGFDSGTSVSTMAFQADRFIWFDSSSGTAVAPVSIVNGQMFIKSALIQDGTIDNAKIGDEIASNNYKPDRTGWRLDKNGRFEINGVVEGQGRVTITNNAIKVFDDKGRLRVHIGDLSA
696501..697175                     PHAGE_Pseudo_Pa2_NC_027345: hypothetical protein; PADK1_00646; phage(gi849120675)     7.74e-36            PseudomonasaeruginosaDK1MTYGVRLVNDRDQINVDDNNPIYYVVQEGVYTQTVKYPNSIVFDESYRHTLQTPLVFVKPNAGGGQLCMLLKYFGSAGNWQGCEWHTTTVPGAAPGVVGGRYKVVVPFMPKSTGWGMHVMDSAGQIVFDSGYKPAIFTGGSQYWTYYAWNPNPPGGGGSGVNSWQSVPGMPADTYFCITGLMEDWDGRNTMIGDLWGNRQYLYVVQWRSYQNKGVYPSPLLMIK
697617..699011                     PHAGE_Pseudo_JBD93_NC_030918: sliding clamp; PADK1_00647; phage(gi100053)            1.80e-83            PseudomonasaeruginosaDK1MPWYSTGTVSVVLNSDTVTGSGTAFSANARAGDAFRGPDGRWYEIGNVSSATVLTIKPAYQGATANGQAYSITPVQGYSKALADQLRDLNNLWGSTLAAVKPWATAATGPAALDDMGFGVTGKALAVSATPVAARSALGVPAVGDYGIGLTAGSSNTLSDANVVIPNGIYRVASTTAGTMLGSYIGQMLHAEQQGGYGVQLVMAAQTPPQMRMRVKNAGAWQAPVDILTSNDAANMPLVNLMPDSGRYAGTVNPLAITLAQPWANSTFSSGWNGASFMDGGKFTHDNSSNGGGGAELNARIQSLLQTMGRSAGGARYGVEFHVAVMTAGIGRANESVGLDGGSRFLAMTNNSRALFCSNQWATVVMWVRVESGSMHIATPAQTTVAVWINGAAKSPGHVLTPAEGWVHVRVATRAWGGYDNAFPYFHTVPGSAVAMACPAWFGGLADVGIHTAPIATINGASAA
699008..699292                     PHAGE_Pseudo_H70_NC_027384: hypothetical protein; PADK1_00648; phage(gi849255430)     2.61e-34            PseudomonasaeruginosaDK1MMKRILLDGELFAENSLSTLAEVAILADIDVSRLSFHPDDLFAEANKKRQDAYRLESDPLRLEAEYDALKAGSEPDYRAWVAKIDEIKARYPLP
699699..700304                     PHAGE_Halovi_HGTV_1_NC_021328: carbamoyl phosphate synthase small subunit; PADK1_00649; phage(gi509140368)     4.25e-09            PseudomonasaeruginosaDK1MLLMIDNYDSFTYNLVQYFGELKAEVKVVRNDELSVEQIEALAPERIVLSPGPCTPNEAGVSLAVIERFAGKLPLLGVCLGHQSIGQAFGGEVVRARQVMHGKTSPIHHKDLGVFAGLANPLTVTRYHSLVVQRESLPECLEITAWTQHADGALDEIMGVRHKTLNVEGVQFHPESILTEQGHELLANFLRQQGGVRGEGN
700306..701355                     PHAGE_Geobac_E3_NC_029073: putative pyrimidine nucleoside phosphorylase; PADK1_00650; phage(gi985758391)     3.11e-05            PseudomonasaeruginosaDK1MDIKGALNRIVNQLDLTTEEMQAVMRQIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKAMKYAAGPRRELGLRTLFNMLGPLTNPAGVRHQVVGVFTQELCKPLAEVLKRLGSEHVLVVHSRDGLDEFSLAAATHIAELKDGEVREYEVRPEDFGIKSQTLMGLEVDSPQASLELIRDALGRRKTEAGQKAAELIVMNAGPALYAADLATSLHEGIQLAHDALHTGLAREKMDELVAFTAVYREENAQ

#### region 2 ####
4564903..4564914                   attL                                                                                 N/A                 TTTCAGGGGCTT
complement(4565298..4566290)       PROPHAGE_Pseudo_PAO1: bacteriophage integrase; PADK1_04214; phage(gi15595925)        3.41e-145           PseudomonasaeruginosaDK1MSITKLPDGRWLADVEPIKGKRFRKRFKTKGEAQRFEATVRQKCIENPVWSIKPKDRRRLSELVKLWYDLHGHSLRDAPRRLSKLLQLAARLGDPVATALDASSYASLRRKRLEEGISGKTLNNELGYVRAVFNELKDLKQIDYDNPLAGVKLLKLQERELSWLTTEQIGELLDSIRNGCDNPHTELVTLLCLATGARWSEAEKLPVQRLQGNVVTYAGTKSGKVRHVPIPLDLADRVRAHWRMHGPFTSCITSFRRALERTTIQLPQGQASHALRHTFASHFMMNGGNILTLQKILGHSTLTMTMRYAHLSPDHLQDALRFGPDILSQL
complement(4566290..4567582)       PHAGE_Pseudo_Pf1_NC_001331: hypothetical protein; PADK1_04215; phage(gi9625374)      0.0                 PseudomonasaeruginosaDK1MKKISHQIRVSIESDGQVLESPKGRLFFDDTTAQFTDLSGVRILRCGVDTVRQLYNGKLRPEVMALFDLSVDVVEFAGYEWSKGRIGRDSGYQYRLQNAELGLILLIKNHNIKVDTLGSHLKIEVSPHALDGADPRILQGVLDDLAAAVLSHCETNQAAVHIALDVQGWKPPRDLVDRMHCRSRRVRQISGIERIEFDGNASVYGRGETYMFGSANGLQLSIYNKTLQARATDKLDYWESVWATLNGDPFGDGDPAYNPLETVWRLEFRFHHSIVQQFSEGSRMASGEVIGCRTYEGLCPHLQGLWNYACESFKLLSRTAVYDPFWSLISQDARVQVECDPLIERTEYRRYYKTAKGFSGRNCEMFLGQFISLIARERIPAKKAIESARKLEFWHVIEDHYLAKGWTRRDLERHIHKLMCDRYLRRGYAV
complement(4567714..4567815)       hypothetical protein; PADK1_04216                                                    N/A                 PseudomonasaeruginosaDK1MIDWEFLVPVAMGWALHHWWTVMTALAAVGVPP
complement(4567812..4569095)       PHAGE_Pseudo_Pf1_NC_001331: putative assembly protein; PADK1_04217; phage(gi9625373)     0.0                 PseudomonasaeruginosaDK1MSIKIHHGPNGSYKTSGAIQDDAVPALKDGRVIITNVRGFTLERAYQVFPDLPNTAEIINLDLESLEDLEKMRTWFQWAPRGAFLIFDETQLLFPKSWREKDLERFDYPGGPEAAHAADRPMGWLDAWTRHRHFNWDIVLTTPNISYIRDDIRMTCEMAYKHSNLAVIGIPGRYKEAQHDAQLNRPPADGTIIEYKRIRKQTFALYQSTATGKTQDTKAGKSLFRSPKLVLLLALLAGTIGFVSYMGPMRVIGAKPDPAASAPTPKPLPTATAPAAVAAPARPAANSFLPPGLVPDGPAAAPVDLNAHPFADRRISILAHAYMPSKGDIYMFALDDPAGRHLELTSWQLVGSGYAIKPRGECVAELLYGEWEGTVTCAGSSVRPVAVAGVPPLLNLPPSAAGAREPDKVPLTIVPDSEYASRPWRQK
complement(4569099..4569455)       PHAGE_Pseudo_Pf1_NC_001331: hypothetical protein; PADK1_04218; phage(gi9625372)      1.14e-65            PseudomonasaeruginosaDK1MEWLSGFLDQIIAFFQWIWDFFAQGIYDFVRDGLVVATKASMYAALQTLILLIDVSYTAARELIDSLGVPQMIRSMYAALPGPIAAGLAFFGVPQALNIIMVAAATRFCMRFVPFIGR
complement(4569460..4570788)       PHAGE_Pseudo_Pf1_NC_001331: hypothetical protein; PADK1_04219; phage(gi9625371)      1.16e-41            PseudomonasaeruginosaDK1MRIEKRARWFALVRQVCAVLLVLCSWSAYAEPYYWQLNGPTAPDRFTSPSAACEVGLGMYKAQYPTVEMVINSREMRGSTNYVCTVFRYFNGNRIEPNFTISVMRKGTGCAEGSTYNAQTGVCETPPENNCIKGLTDLFSSPPSNIFVSGGRNFVNSSPPTGCKNGCQYLPTTSKTTSCYRYPGSDNQGFCNYVLMTDGSACAADSGNPGMTGPSLNDTPPTNPDEPPSDPNDPGCPPGYSWSGTTCVKTPTDPTEPGGDGGDGGDGGNTGGGDGGGDNGGGNDNGGGDGGTGGSDGSGGNGEGGGDGSGGGDGSGGGTGGGDGGNCDPAKQDCSPGPAGPGGELKEPKPGTWDDAIATWELKVEQAKKELKDKVRANVDQMKGAFDLNLAEGGGQLPCESVTIWGRSYSLCVADYADQLSNLRVALLLMAALIAAFILLRD
complement(4570942..4571190)       PHAGE_Pseudo_Pf1_NC_001331: major coat protein; PADK1_04220; phage(gi9625370)        6.06e-48            PseudomonasaeruginosaDK1MKAMKQRIAKFSPVASFRNLCIAGSFTAATSLPAFAGVIDTSAVEAAITEGKGDMSSIGGYIVGALVILAVAGLVYSMLRKA
complement(4571203..4571454)       PHAGE_Pseudo_Pf1_NC_001331: hypothetical protein; PADK1_04221; phage(gi9625369)      7.33e-54            PseudomonasaeruginosaDK1MSGVVAVQVCTAWTSTPEGFMACRELAWQQAYLIPPEAAGYVDILVNGGFSPEAFGIGAAGVLGSFVTGLLIGWVASLLRKAK
complement(4571467..4571559)       PHAGE_Pseudo_Pf1_NC_001331: hypothetical protein; PADK1_04222; phage(gi9625368)      1.82e-12            PseudomonasaeruginosaDK1MLRYLSLFAVGLATGYAWGWIDGLAASLAV
complement(4571576..4572010)       PHAGE_Pseudo_Pf1_NC_001331: ssDNA binding protein; PADK1_04223; phage(gi9625367)     6.45e-99            PseudomonasaeruginosaDK1MNMFATQGGVVELWVTKTDTYTSTKTGEIYASVQSIAPIPEGARGNAKGFEISEYNIEPTLLDAIVFEGQPVLCKFASVVRPTQDRFGRITNTQVLVDLLAVSGKPTAPTAQAPARPQAQAQAPRPAPQPQGQDKQDKSPDAKA
4572525..4572536                   attR                                                                                 N/A                 TTTCAGGGGCTT
