gi|00000000|ref|MF150911.1|  Ralstonia phage DU_RP_II, complete genome. 42091, gc%: 62.17%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
8063..8075                         attL                                                                                 N/A                 CCAACGCCAGCGC
19634..22150                       PHAGE_Ralsto_RSK1_NC_022915: bacteriolytic protein; R2B_p016; phage(gi560186037)     0.0                 MTIQSQTTRVDYTGNGATTNFPVPFYWLQDADLLVIRTDNAYTPPAVATLALTTDYVVAGSGNQSGGSITTTVAPTATQKLSILRNVPFTQLTHYVPNDPFPAASHEQALDKLTMETQQLNEGLSRSLTLPPNVTAVSTNLPAPVASNLIGWNPTANALQNVDLTTIATSVTYGNAKGDLFSGNGATVNFNLSANPGGVNNLDVSIGGVAQRPGIDYNWTAGTTLTFTTAPPSGTNNILVRYTQALPIGTAAAGNVAFDNTTLDQQFLRRVNRVVDSIAALRGLSKTTYTRAFVTGYYAAGDGGGGAYWYDPTDTTSTDNGGTIIVAADGGRWKLIITTSFVSAKQFGAKIDGVTDDSTVINNAKAPLDALGKRLYFPAGICKIGTAIMPPLAGVFGDSPQSSVILCNGVSAFNFPSTFGLGRPACLIEKLGIKSYNNTCDGLFAFNAPGVASGAAVVYNSGLTVRDVEIGTGGRFGGAFSLKDFFRVNIENVGCTDVSQVINLAGSVVQCTFRNITANGDNAPTILQRTGLSTTAATYSSGLLTPEHISCWDCSFIRFNIGVNHQAGLMIDFNQMDMETFQYGFYLRAACNINGGIINPAPNSAGTAAWIGVFKDVQDFEITNGAIIDGLDVNALNVPGTPGSSYGMVIGNGVNKCVGTTIKNCRFRGSASSFLSAISAPLMGGEIILENNQVSGTVATGTTFSVTGASYARVVGNRCATGGTVNGSMSITDSGAGTVGTVLGNEFATITNTVNAYSGAWAPGTIANLVAASTTVAVPGAIAGDRVVAGLSSLIGSGNCIISGYVSSSGNVTVMLLNASGGSQTIPSGTLSVSVIKP
22522..22740                       PHAGE_Pseudo_vB_Pae_Kakheti25_NC_017864: holin; R2B_p017; phage(gi388542661)         1.10e-10            MKLIDDWKTCHRLYSQQINAAGVAIGSAYVMFYDQLRDMLPAKHLAVLTVVLFAVNCVARIIKQEPKHGPRS
22724..23236                       PHAGE_Klebsi_F19_NC_023567: endolysin; R2B_p018; phage(gi589890543)                  2.41e-17            MALDRKKKSLAAVMGASAAAALVAFTAPREGVSLTPYSDHLANGLATVCYGETNVRMRRYTLPECKQMLADSLADYATRVRDMTPGFDSLTDGQKVAVVDFAYNAGPKNYERSTLRRLYIAKDFPAACDAFLQWRFVAGGTKDCFNPANKCSGIAERRRAARAACLGDTP
23233..23757                       PHAGE_Ralsto_RSK1_NC_022915: hypothetical protein; R2B_p019; phage(gi560186041)      1.61e-42            MTFDWIKLGGIAAVVFGLVMGAVGLHHHVYKQGYEAGAAAVQKQFDAAKEAAEAKRLADVEAARAEEQRRAQAQAEIANDATKQADAARADAAAANTAADGLRARVAQLVAAARASRNSAVASAGAAAGDPLDVLANVLTRADRRAGDLAAYADSARVAGTACERAYDSLTAAK
23790..25256                       PHAGE_Ralsto_RSK1_NC_022915: hypothetical protein; R2B_p020; phage(gi560186043)      0.0                 MTVEGVTAAQITELQNHQSALIFVQAAGANNVAPNTAFASILPTTSSVTITGGGDGLDTQLIGYTKATQYFLGAGSSYTFNTLPVSGNVSDLKLTRKISDGTVAVLTYVASGPTGTQWTGAISGGAVAITLGTALNSGEYIRAEDPYAAIATGGQAPSYGSIHGGYDNSIQSGLMNHIVSSAHSHIDDQDGTPGHTMIFGGSAHYITGSIAYSSILGGTGNEIRSGAGNGSVILGGLYSKVSGATAAVLAGERCKVTATYGIASGQSQTVSGTASVALGRGHTVSGANALAIGQGNTVSSDNSIALGNTGTVNSSHAYSALMGGYKARSVMAGNSVNWAYRDSSVGANPLVQDDRIYMGAYFSDQSTHLLPNHVDGVTTDIPVTAGSMTTYQIRVEARGGNIRGGWWTLTAVVQAPAVLAAGTPAVIVAQSVDFSYVDPGLGAGANAVDVSLSINASTGAALNITVKQRVDSAVGTKWSAIVSRAELA
25266..25664                       PHAGE_Ralsto_RSK1_NC_022915: putative polysaccharide deacetylase; R2B_p021; phage(gi560186044)     2.50e-84            MRKLTIGSTVVEQLDNSGNYTIAGKLLSGLPADYNGTQGQFNGSVSVTAVGAGYRVVEGANAKQGVATLSSGAAVVSNTSVTANSRIFLTAQDNNSTGVLRVSARTAGTSFTITSSVITDSGVVAYQIFEPA
complement(25801..26949)           PHAGE_Pseudo_PMG1_NC_016765: integrase; R2B_p022; phage(gi374531680)                 2.29e-16            MAQQSTTAASARPAQELNERSAKAAQPGDVLRDASVRGLHLRCFCERKSFYLYYRTKAGQERKPKLGDYGSITLTQARKIAQELLARVAVGGDPQAEREAARAERTLAELWAEYWKRHGSKKKSAGADQGIWDRYLRDKLGSRKLSTIAYTDIADLHESMAAKPIMANRVLALASKMFSFAHKPLEWTDGRNPAKGVQRYRETKRKRYMRAEEAARIAAALAAESTENPASVAFIYLLILTGARKGEIASAKWSQLDGAKLVLQEHKTDATGHDRVIHLPPQAMAVIDRLPRTSGTITGIQSPQALWEKVRAAAHCPDLRLHDLRHSFASAAIGAGMTLAQIGELLGHTSTQTTARYAHLVEEAAAKAAAETANRIGSTMGL
complement(27138..27320)           PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: hypothetical protein; R2B_p023; phage(gi937533333)     1.63e-05            MNLLPKEAAARLRVHDKTLARWRVTGEGPRYIKHGRKVLYPVKEIEVWEQEKLRVNTAEC
complement(27317..29485)           PHAGE_Pseudo_MP1412_NC_018282: integrase; R2B_p024; phage(gi399528988)               1.04e-69            MSRLEHALRLAERGFYVFPVAPDGKLPAIKDWVNKATREPEQISKWWSNRDYNIGISTTRFGDDKALCVVDVDTKEGKDGERSLLQLELQGQELPVTLEQATPSGGRHLVYLVDAPLRQGVDVLGNGLDIRSRGGFILGPGSEIGGRKYAQINGHGVLASAPGWLVDRLGHAPERRAAVTDPLAGVDADRAQARARDWLMNHAPLARQGDGGDITTYKVAAQLKDFGLTEEYAFGLMLDTWNEANEPPWNANELADKVAHAFRYGKDQPGIAAPEAVFAAAEPPAPADGDEQHPAEALNREFAFIKRGAFILQETRDEEGRFTTERMSPADMHAWFANKMMQVGDKKVPLSKLWMSRPTRREYDAVVFQPGRASDPRFYNLWRGFSYEPKAGGHKALDAFLEHAKVNVCGGNEGLFRWLMGWFAHLVQHPDEKPLVATVFRGAKGTGKNALVERVGALLGEHFMVADDDRYLLGNFNSHLESNLFFVLDEAAWAGDKRAEGRLKGLITGTKHTIERKGQEPYRSRNLTRVAIIGNEEWLVPASQDERRFAVFTVGNGRRQDRKFFTDMRVGMERGGYSHLLHYLLHFDLSTVDVNEAPKTEGLIEQKIASLEPPEQWWLDCLTHGYIAGGDMGGEWPGLIPTNRLRDAYLRWAKNRNIRGWLLEERGFGRRIKKLIPGATRKRTGASQMGDATWSYILPTLDAARAAMDALVDGTIDWENDE
complement(29487..29693)           PHAGE_Pseudo_pYD6_A_NC_020849: hypothetical protein; R2B_p025; phage(gi472340758)     7.91e-10            MADIIDQAQEQAERILQAELSAQRAAGPEATGYCLACGETVAHGMRWCNVMCRDDYQRMEAARCRNGN
complement(29712..31718)           PHAGE_Pseudo_PaMx74_NC_028809: putative DNA polymerase; R2B_p026; phage(gi971745275)     2.81e-116           MTILHIDLETCSACELRDRGLHNYAADPTTDVHCAAYAFDDEPVEIWLPGQPCPPRVSAHIKSSGRVIAHNFFFEIELTNNVLARKHGWPKLSIEQGACTMAAAYAMGLPGALENAAPALGLAQRKDAAGKRVMLQLAKPRAEGGFWAPETAPEKFEQLYAYCKQDVEVERALHHRLMELSDDEQRIWQLDYRINQRGIRVDLESIDKAIALVEQEKRRLDEEMLRVTGGVVGKCTEVQVLVKWIRTQGVEMNGLAKADVLDALAGDLPPAVEAALRLRKEAAKSSTAKLVAMKERASADGRVRGCFQYHGAATGRWAHRGIQPGNMPRPRPGMGEDEINDVIANLHRHAYIDMMYGPTMDAIADSLRGMIVAEPGNDLAAVDFSAIEARVLAWLAGQESVLDIFRTHGKIYEHAAASIYHVPMERVTKGQRQIGKVSVLALGFGGGVGAFQSMARVYGVKVPDAEADEIKSAWRAVHPAIVSYWYDLERAAIRALTDGGVQAVGPRGREVKFRKAGSFLWLQLPSKRVLCYPYPELRIVDTPWGEQKEALTYMTELDSTTRKKLGNKVLPDPNANGNWCRISTYGGSLAENVTQAVAADLLRYSMETLESAGYPITLTVHDEAVVEIASSCDDRTLERIEELMAQTPAWAAGLPVSAEGWRGPRYRK
complement(31890..32444)           PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; R2B_p027; phage(gi100017)     1.18e-28            MADNIITPEFRGAFVSVFKASGMKGQPDSAKKFSVRAVFLPNADLSAMKAQAQAAAQEKWGSNVPKTLRSPFRRNEELDNPVVGVPDDAIVMTFSANEDRRPGVVDANLQDIIDEAECYSGAWYRAQVRAFAYEQSGNKGVSFGLQNLQKLRDGEPLGGRIPASKAFDAVPSEGGSKTAGGMFD
complement(32463..32903)           PHAGE_Staphy_phiIPLA_RODI_NC_028765: hypothetical protein; R2B_p028; phage(gi971741332)     3.97e-28            MNTADVRSEYRAWVKLRNRCNNPNNPQYKDYGGRGIFVCERWRSFSNFIADMGRKPSPLHSIDRINNNGPYSPENCRWADKKTQVRNTRPRSDLGLSGLYRYPNGKFRVRINIGYKTIYIGTTDDFFEACCLRKSAENRYWSDTSV
complement(32903..33817)           PHAGE_Achrom_83_24_NC_028834: PD-(D/E)XK nuclease superfamily protein; R2B_p029; phage(gi971747988)     1.13e-34            MENELLVEQRFHLHELHSDLFGTSDAIVWQPHLERLSVIDLKYGAGVPVEVEDNPQLQYYALGALLANKQWKPREVEVVIVQPRCPHPDGPVRTQVLQVVDLLDFAADLVEAVKRTEEASAAYLCADSGPLEAQWQRMYLEPGDHCRFCPAAAICPAQKNKAQQLAKQAFAPGLPYDAKQLAETLEWLPVLEAWIKNTREFAYAEAEKGHDIPRHKLVEKRATRKWRELSAVDITRLEIAVGGEVYDEPSLKSPAAIEKLLPKDQRKILDDLCIKESSGHTLVHESDRREAIKVDARSAFSEVK
complement(33807..34061)           PHAGE_Staphy_2638A_NC_007051: ORF010; R2B_p030; phage(gi66395460)                    1.29e-13            MNLPAHSKIGASSMKRWSKCPGSVKLSEGIESRSSVFAEEGTKAHELGEKWLKEGETAIAGYPVDMVEHVSVYVDAVMERVNGK
complement(34058..34570)           hypothetical protein; R2B_p031                                                       N/A                 MELKFNLDTMSSSQLGWLIDSLDAYRARRDGFTQHAQPEVAHNTGSTEPAPPFTGDPAGQPESAAASEPPADAAAPAVTEQKRGRGRPRKEAVQESAAPAAEEQAPAEPATESAQPITIDDLRAALQVFTAKNGIEAGMPLLAKYNARRISEMAEQPEDAKAAFIKECQA
complement(34641..36023)           PHAGE_Rhodot_RM378_NC_004735: similar to DNA helicase; R2B_p032; phage(gi30044094)     2.23e-52            MIVPLETPFPYQQVGAHFLSNHRQALLADEMGLGKSCQAVVGADIIGANNILVLCPAAVRINWEREFTRFSPLDRPCTVLLTGKDRVPTSGVVVCSYDLLANEKTREQLKRIRWCLLVLDEAHALKERSAKRTKAVYGHRSNAPGLMANAVRTWRLTGTPAPNNASELYTHLKSAGLIEMPYWDFVARFCTGFDSGFGFKITGHKNVDELKQLLGRFMLRRKKEEVMTELPPITFQEVTVERTSVDLLPFTEQLRGKTTEQFMAELKLADSTLKAAFLSIKDSKTPFQDRLKVLESMANGNMTTLRRYLGLAKLTRIGDILEEELATGAVQKIVIFGIHKDVIEGCRRRFAKYGAVTLYGGTPGEKRQANIDRFQKDPKCRVFIGNIQAAGTGITLTAAHEVAFVEADWVPANNAQAAMRCHRIGQDKPVRVRFFSCAGSVDEEVMDTLRRKTRELAKLD
complement(36369..37646)           PHAGE_Ralsto_RSK1_NC_022915: hypothetical protein; R2B_p033; phage(gi560186056)      5.01e-68            MQLTEQQINLLRELLERVEYDPAGPTEEKVHKALEALDGLRAQADARPVAWQYRSHGSGHWMTTTKEVHDDYRDRGITECRELFIHPAAPARPEEPTVAALEAIAGGDHDGHARVNGGVYRAPVAWVRYCSDGTFDGPIMDTDIRMAGARRASGAWTPLYAHPSAEPCRADNVIRKPCLDTAEMLEMRITEAMTRLDEAKAEVKELRHALAVARDQMRFMANWFRHSSPAEPAAGEWKMWVDAWMGRQDIVMRIEAYDELIAAQSGQRAGVAEGWKLAPVELTDEMRQAAYDAFIAQSKKRNGLVEAYRAAIAAAPTTQQRAEPAADEWAEFETALKQYAEACHRSESCSAMDAARARVCAIFSRAAQSGQRAGVAEGWQLVPKVPTQAMRDAGFEAIPGIMCALAVNVWDAMIAAAPAHHTDQS
complement(37938..38417)           PHAGE_Caulob_karma_NC_019410: putative RNaseH-like domain protein; R2B_p034; phage(gi414089557)     9.68e-20            MTLIIGIDPGVSGAVAFINGASACVCDMPTTKAMRGKAALDVCGERLRSLLEPHASPVTTAYVEQVQSRPRQAGQFAFGMNYGRVLGVLEALGIPIVHVPASKWKPAMGLRGQDKATSVALAAQLFPHLKDQLYGPRGAPLDGRAEALLIAYYGSKQCN
complement(38976..39263)           hypothetical protein; R2B_p035                                                       N/A                 MTKRIKGAGKHGRPTYNQSAKIIAKFGGEAAFAKAIGISRITAYRHQYSKPYGTDGLIPSPLISKIEKAARLHGVLLTPADWLPEKINYEEQEDA
complement(39260..40003)           PHAGE_Edward_MSW_3_NC_020082: hypothetical protein; R2B_p036; phage(gi448261087)     2.98e-33            MAIEIRNRWTGAVILTVEAENLRDADLRDADLSYADLRGANLSYADLSDANLSYADLSCADLIYADLSDANLIYANLIDANLSCANLIDANLRGANLSYANPRDANLSGANLSDANLSYADLSDANLRDANLSDANLRGANLSDANLSYADLSDANLRDANLSYAAGNLKQVKSIHADRWVVTYTADTMFIGCQTHALTDWWGFDNRTINAMDTGALKWWRKWKPVLQAIIEASPAEPTKPETEAAP
40717..40729                       attR                                                                                 N/A                 CCAACGCCAGCGC
