gi|00000000|ref|NC_000000|  Pseudomonas aeruginosa plasmid p727-IMP, complete sequence. [asmbl_id: NC_000000].430173, gc%: 56.40%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
222356..222367                     attL                                                                                 N/A                 CTCACTAGTGAG
complement(222838..223980)         PHAGE_Mycoba_Butters_NC_021061: integrase; -; phage(gi479336499)                     5.61e-10            MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTPALRRGTAGGGAVALNSLLGLGPADTTKLEAHNEPQNRKKEHDQLAHGTAPRNYDLTGHAVHWQRPRIRRK
224333..224989                     PHAGE_Microc_MaMV_DC_NC_029002: hypothetical protein; -; phage(gi971764756)          1.96e-15            MEKSKQLYNQVNFSHQDLQEHIFSNCTFIHCNFKRSNLRDTQFINCTFIEQGALEGCDFSYADLRDASFKNCQLSMSHFKGANCFGIELRDCDLKGANFSQVSFVNQVSNKMYFCSAYITGCNLSYANFEQQLIEKCDLFENRWIGANLRGASFKESDLSRGVFSEDCWEQFRVQGCDLSHSELYGLDPRKIDLTGVKICSWQQEQLLEQLGVIIVPD
225194..225556                     putative conserved protein, contains double-stranded beta-helix domain; -            N/A                 MKAETESRIFSVDEYVRPSNGEPIRSVVLETNDSVIVVWHAHPGQEIAAHVHPHGQDTWTVISGEAEYYQGDGVATHIKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAPANAGFALAEK
225695..226147                     Rifampin ADP-ribosyl transferase; -                                                  N/A                 MVKDWIPISHDNYKQVQGPFYHGTKANLAIGDLLTTGFISHFEDGRILKHIYFSALMEPAVWGAELAMSLSGLEGRGYIYIVEPTGPFEDDPNLTNKKFPGNPTQSYRTCEPLRIVGVVEDWEGHPVELIRGMLDSLEDLKRRGLHVIED
226270..226767                     PHAGE_Bacill_Bobb_NC_024792: dihydrofolate reductase; -; phage(gi682124184)          8.57e-35            MNRESVRIYLVAAMGANRVIGNGPDIPWTIPGEQKIFRRLTEGKVVVMGRKTFESIGKPLPSRRTVVLSRQAGYSAAGCAVVSTLSQAIAIAAEHGKELYVAGGAEVYALALPHADGVFLSEVHQTFEGDAFFPVLNAAEFEVVSAETVQATITYTHSVYARRNG
226964..226976                     attL                                                                                 N/A                 GGCTTTTTCTTGT
complement(227573..228277)         PROPHAGE_Brucel_1330: transposase, putative; -; phage(gi23502708)                    1.98e-53            MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
complement(229110..229442)         Tetracycline resistance repressor; -                                                 N/A                 MEKADAQLRFLCDAGFSAGDATYALMAISYFTVGAVLEQQASEADAEERGEDQLTTSASTMPARLQSAMKIVYEGGPDAAFERGLALIIGGLEKMRLTTNDIEVLKNVDE
229572..229697                     Hypothetical protein; -                                                              N/A                 MRVIYRQHGFGKCVEQRTLVLEMPVERWLLHPEALSQSARR
229862..231052                     Tetracycline efflux protein TetA; -                                                  N/A                 MKSNNALIVILGTVTLDAVGIGLVMPVLPGLLRDIVHSDSIASHYGVLLALYALMQFLCAPVLGALSDRFGRRPVLLASLLGATIDYAIMATTPVLWILYAGRIVAGITGATGAVAGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAISLHAPFLAAAVLNGLNLLLGCFLMQESHKGERRPMPLRAFNPVSSFRWARGMTIVAALMTVFFIMQLVGQVPAALWVIFGEDRFRWSATMIGLSLAVFGILHALAQAFVTGPATKRFGEKQAIIAGMAADALGYVLLAFATRGWMAFPIMILLASGGIGMPALQAMLSRQVDDDHQGQLQGSLAALTSLTSIIGPLIVTAIYAASASTWNGLAWIVGAALYLVCLPALRRGAWSRATST
complement(231108..231236)         Type IV secretory pathway, VirB4 component; -                                        N/A                 MRTRGQDPTLPEMRRVRLLEMADAMDMFCQGLVCAFTVLRKN
231324..231470                     Resolvase; -                                                                         N/A                 MKRLLLQNVCDLSNNMNGLRFPCFVKSGNAEVPYVLLKLPATESGTNR
231502..231780                     Resolvase; -                                                                         N/A                 MSGLISYSELQQSAPLPVAIDYPAALALRQMALIQGKLPKYLLAPEVSALHHYVPDLHRRMLLATLWNTYICINEALALTLSDFSLVPPYHC
231777..231998                     Hypothetical protein; -                                                              N/A                 MKATAHHAFADIEPCRPIGLRLSAQETAGDERILFRRLVAVALGVAADEPAGVALAEQRKADLATTSPRPPIV
complement(232138..232842)         PROPHAGE_Brucel_1330: transposase, putative; -; phage(gi23502708)                    1.98e-53            MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
232833..233660                     PHAGE_Burkho_KS14_NC_015273: gp37; -; phage(gi327198306)                             5.16e-18            MGSCAAPSAKGDDKFITTDYLQQCRVHRNTAYQALKDACDDLFARQFSYQSLSEKGNTINHKSRWVSEVAYIDNEAVVRLIFAPAIVPLITRLEEQFTKYEIQQISNLTSAYAVRLYEILIAWRSTGKTPLITMYDFRQKIGVLETEYKRMYDFKKYVLDIALKQVNEHTDIIVKVEQHKTGRSITGFSFSFKQKKSATHSVESKRDPNTLDLFSKITDKQRHLFANKLSELPEMSKYSQGTESYQQFAVRIAAMLQDAEKFKELLPLLRKLGFQ
complement(234196..234312)         Hypothetical protein; -                                                              N/A                 MLALKLALQKTGVLANHMEGKSGLGSLSSSVLVQHAPG
complement(234628..235512)         Aldehyde dehydrogenase; -                                                            N/A                 MTIQDIQSLAEAHGLLLTDKMNFNEMGIDFKVVFALDTKGQQWLLRIPRRDGMREQIKKEKRILELVKKHLSVEVPDWRISSTELVAYPILKDNPVLNLDAETYEIIWNMDKDSPKYITSLAKTLFEIHSIPEKEVRENDLKIMKPSDLRPEIANNLQLVKSEIGISEQLETRYRKWLDNDVLWADFTQFIHGDLYAGHVLASKDGAVSGVIDWSTAHIDDPAIDFAGHVTLFGEESLKTLIIEYEKLGGKVWNKLYEQTLERAAASPLMYGLFALETQNESLIVGAKAQLGVI
complement(235568..237043)         PHAGE_Bacill_G_NC_023719: gp245; -; phage(gi593777701)                               2.03e-13            MSLIIKARNIRLDYAGRDVLDIDELEIHSYDRIGLVGDNGAGKSSLLKVLNGEIVLAEATLQRFGDFAHISQLGGIEIETVEDRAMLSRLGVSNVQNDTMSGGEETRAKIAAAFSQQVHGILADEPTSHLDLNGIDLLIGQLKAFDGALLVISHDRYFLDMVVDKIWELKDGKITEYWGGYSDYLRQKEEERQHQAVEYELMMKERERLESAVQEKRQQANRLDNKKKGEKSKNSTESAGRLGHAKMTGTKQRKLYQAAKSMEKRLAALEDIQAPEHLRSIRFRQSSALELHNKFPITADGLSLKFGSRTIFDDANFIIPLGAKVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQTGYKFNTHKSVLSFMQEECEYTVAEIRAVLASMGIGANDIQKNLSDLSGGEIIKLLLSKMLLGKYNILLMDEPGNYLDLKSIAALETMMKSYAGTIIFVSHDKQLVDNIADIIYEIKDHKIIKTFERDC
complement(237142..238023)         PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfB; -; phage(gi557307549)                      3.25e-131           MRLKYAFIKKHSTDYPVRRLCQTLKVHPSGYYAWLAEPQSARAKEDQRLLGLIKHAWLESGGVYGYRKIHDDLRELGEECGRNRVRRLMQAEGLRSQTGYRRRPGFYGGKPTVASPNHLARQFKVSEPNKVWVTDITYIRTYEGWLYLAVVLDLFSRQVIGWSMKPRMCSDLAIDAMLMAVWRRKPQQQVMIHSDQGSQFSSSDWKSFLKANNVISSMSRRGNCHDNAVAESFFQLLKRERIRRKIYTTREEARSDIFDYIEMFYNPKRRHSSAMQLSPVEYEKRYFLSLESV
complement(238014..238292)         PHAGE_Shigel_SfIV_NC_022749: ISEhe3 orfA; -; phage(gi557307550)                      6.58e-29            MSRQRYPEEFKIEAVKQVTEKGKPVADVAQRLGMSVHSLYAWIKVYSKPQEQRQQDDDQQAELRKLRAELKRVTEERDILKKAAAYFAKECG
complement(238677..239852)         PHAGE_Shigel_SfII_NC_021857: transposase; -; phage(gi526244660)                      2.75e-56            MNVKAMLADFLTFVTPKSMHKARFSVLLDAVTALAKDACCTVTAIGRAMPGSSDKVSIKRADRLLNNPNLQRELPLIYAALTASIVGHKTKPMILVDWSNADTAKRHFILRASIAADGRALTLLQKIAAAEDYTCPHLHGAFLKQLKAMLPKDCKPVIVTDAGFKVPWLKQVRKLGWHYVARVRGNVKLKLAEQDKFISVNQLYRQAKKDPKSVGKIMLAQTQHYETQAVLVGKGYKLLKRDKNKTYKEPWLLVSSLADCHGYADKIAKCYSSRMQIEESFRDQKSHRYGLGSDLHGTKKKSRLEILLLLAALVNWFHYLLGSAAEKAGLHLRYQANTVKNRRVLALNFLGILLCKEPKQRIRRQYYQQGLKQILQWVVQWDWAVIKQADS
239910..240095                     putative permease; -                                                                 N/A                 MFPNQLTFYFNYRISGDTSGGLQLFGLIGLIYGPIIFALTMVLLRLYTIEFKDFLERQDNS
complement(240577..241545)         Ribosomal RNA methyltransferase; -                                                   N/A                 MIGHGATPYRNGRVLHSVFAAALIGLVVRGAKTVVVRGKNRILTRNRKKPEMTVPIKYLTCRFFQMDKNDVVKKILESKKYENLDSDIVEKVVSISEKKYKLKEVENYSKKKLHQIWGSYYSAYPNWDKLLKKYNQGQLSIEDLLKIHSSTNERVATLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIGNELVYITSGFQK
241534..242550                     PROPHAGE_Escher_MG1655: IS30 transposase; -; phage(gi16132105)                       1.58e-70            MSYHELSATERVTIQIGLCNGFSQRRLARLMNRSPSTVSREIRRNRNAQGEYVADDAQRLMHTRRVVCRPAKRLVPGNELFELVAHLLRQRFSPEQIAGKLRTMKSPSFEDAYVCRETIYNAIYALPVGELRKELIICLRQGKTTRRPRSGGVDRRGQIPDMVSIHVRPPEIEDRLMPGHWEGDLIKGKANASAVATLVERTSGYLILAKMNDATATSAVEGFSAALNRMPLAVRKSMTYDQGREMARHAEITQKTGVAIYFCDPHSPWQRGSNENINGLIRQYLPKGTDLSVYSQEQLDAIAYELNIRPRKRFNWKCPIEVMTEVVALQHDAPASIQ
complement(242779..243615)         PHAGE_Entero_HK022_NC_002166: IS903 transposase; -; phage(gi9634149)                 6.31e-103           MDEQAIKQWHCLVHHGRRGRGFHYSDTAIETALMLKGLFKLPLRALEGFINSLFQLMAVPLQSPDYSCISKRAKTVDIKYRLPSQGPVAHLVIDATGLKVYGEGEWKIRKHGKEKRRVWRKLHLAVDATTHAVIAAEVSLETVADNEVLPTLLNPLRRKIKQVSADGAYDTKACHALLKKKGAKATIPPRKNAAPWEEGHPRNEAVTALKAGELKQWKKDSGYHQRSIAETAMYRFKQLIGPTLSLRNYNAQVGEILAGVKVMNKLIGLGMPVRQPVN
complement(243852..245393)         Mobile element protein; -                                                            N/A                 MSLARNATASQSPTQTNGYERHQPDQTLLYQLVEQHYPAFKASLEAQGQHLPRYIQQEFNDLLQCGRLEYGFMRVRCEDCHHERLVAFSCKRRGFCPSCGARRMAESAALLIDEVFPKEPIRQWVLSFPFQLRFLLARHPQLMGQVLSIVYRTLSTHLIKKAGYTKASAQTGSVTLIQRFGSALNLNVHYHMLFLDGVYAEDDYGKQRFHRVKAPTYDELNTLAHTLSHRIARCMEKRGILERDAENTWLTLEEGEDDTLTQLHGASVTYRIAVGPQQGRKVFTLQTLPGREDKADSSSRVANHAGFSLHAGVMAEAHQRDKLERLCRYISRPAVSEKRLALTANGQVRYELKTPYRNGTTHVIFEPLDFIAKLAALVPKPRVNLTRFHGVFAPNSKHRVQVTPAKRGKKPDKSEGLDTNWRDKSPAERHRAMTWMQRLKRVFNIDIEVCEHCGGHVKVIASIEDPKVIEQILKHLKQKTAKANAAKQRELPPERAPPLTPSLFDPSQSRLFD
245603..245615                     attR                                                                                 N/A                 GGCTTTTTCTTGT
complement(245798..246637)         Dihydropteroate synthase; -                                                          N/A                 MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFLSPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA
complement(247135..247767)         Chloramphenicol acetyltransferase; -                                                 N/A                 MTNYFDSPFKGKLLSEQVKNPNIKVGRYSYYSGYYHGHSFDDCARYLFPDRDDVDKLIIGSFCSIGSGASFIMAGNQGHRYDWASSFPFFYMQEEPAFSSALDAFQKAGNTVIGNDVWIGSEAMVMPGIKIGHGAVIGSRSLVTKDVEPYAIVGGNPAKKIKKRFTDEEISLLLEMEWWNWSLEKIKAAMPMLCSSNIVGLHKYWLEFAV
complement(247905..248780)         Beta-lactamase; -                                                                    N/A                 MLAVKIKPFTKPILIMKNTIHINFAIFLIIANIIYSSASASTDISTVASPLFEGTEGCFLLYDASTNAEIAQFNKAKCATQMAPDSTFKIALSLMAFDAEIIDQKTIFKWDKTPKGMEIWNSNHTPKTWMQFSVVWVSQEITQKIGLNKIKNYLKDFDYGNQDFSGDKERNNGLTEAWLESSLKISPEEQIQFLRKIINHNLPVKNSAIENTIENMYLQDLDNSTKLYGKTGAGFTANRTLQNGWFEGFIISKSGHKYVFVSALTGNLGSNLTSSIKAKKNAITILNTLNL
complement(249253..249927)         Beta-lactamase; -                                                                    N/A                 MPDLKIEKLDEGVYVHTSFEEVNGWGVIPKHGLVVLVNTDAYLIDTPFTAKDTENLVNWFVERGYRIKGSISSHFHSDSTGGIEWLNSQSIPTYASELTNELLKKDGKVQAKYSFSGVSYWLVKKKIEVFYPGPGHAPDNVVVWLPENRVLFGGCFVKPYGLGNLGDANLEAWPKSAKLLMSKYSKAKLVVPGHSDIGDSSLLKLTWEQTVKGFNESKKSTTAH
complement(250068..250700)         PHAGE_Staphy_SPbeta_like_NC_029119: bifunctional AAC/APH; -; phage(gi985761240)      1.83e-15            MLWSSNDVTQQGSRPKTKLGITKYSIVTNSNDSVTLRLMTEHDLAMLYEWLNRSHIVEWWGGEEARPTLADVQEQYLPSVLAQESVTPYIAMLNGEPIGYAQSYVALGSGDGWWEEETDPGVRGIDQSLANASQLGKGLGTKLVRALVELLFNDPEVTKIQTDPSPSNLRAIRCYEKAGFERQGTVTTPDGPAVYMVQTRQAFERTRSDA
250783..251925                     PHAGE_Mycoba_Butters_NC_021061: integrase; -; phage(gi479336499)                     5.61e-10            MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTPALRRGTAGGGAVALNSLLGLGPADTTKLEAHNEPQNRKKEHDQLAHGTAPRNYDLTGHAVHWQRPRIRRK
252396..252407                     attR                                                                                 N/A                 CTCACTAGTGAG
