gi|00000000|ref|MKQH01000014.1|  Lactobacillus reuteri strain 121 scf7180000000041quiver, whole 1570268, gc%: 39.03%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
393741..393756                     attL                                                                                 N/A                 TCACCCGCACGGGGAT
complement(393816..394904)         PHAGE_Lactob_LF1_NC_019486: phage integrase; BJI45_05495; phage(gi418489411)         1.02e-107           LactobacillusreuteriMSYAKKAKKGYYGIAEFKDKDGKRHQKSAGCFRLKREALQAGDELERELNKVNLDLRDVTLFDYFKRWFDLYKSSKAQSASAQNQYRIMKKFINEYFADTKLREIKRSDYQEFINWYGSNHAYKSVSKLNGAIRSCVGYAIDDDIINKDFTHNVNITYNKALERKVDYLTTSELQTLKKNVISKLERYNTSRYMILTAIYTGMRKSEIQALTWNDIDFLHSTISISKSWDEKKKAFKSTKTESSNRVIKVNRQLLKRLEDLKANNSIMVFQNVLGTIPTSNALNKCLHSIMNDSNINKQGFHFHSLRHVHVAFLLSKGVDIYAISKRLGHSNITVTLNTYSYLIDEYKAKNDTLIVDKLAEL
complement(395613..396437)         PHAGE_Lactoc_bIL311_NC_002670: repressor; BJI45_05500; phage(gi13095660)             1.05e-10            LactobacillusreuteriMTNKELGKRIKEIRLKLGKSQEEFGKLFDPPAPKSAVSRWEHGGKPNKKRLVKIAELGGTTVDELVNGSLVDAINTLTSVLYNEYFEYLDYMSNEGTTWKSYVVSKASNSSAETNYTNMSQLFAFLEYDNFLNDRDKDNLGDYNRQNLIAGFKYCANEVLKIATSEGISPTDTPLLIRLFLDVETKHFSNMKSDNEGLFNTAIDALNTAISSVHNLVYGFDQKLLRKGSLGETKIPNTIDKEIYNEVNKILFTTRKQLIRLAEDNNIKIDKDIR
396590..396775                     DNA-binding protein; BJI45_05505                                                     N/A                 LactobacillusreuteriMPGYFNYKQAMAYMNIKSKTTFGKYLANGLPTIKVGNSKRIAKSDIDKFMADHRVVATQDK
396788..397399                     PHAGE_Lactoc_bIL311_NC_002670: Orf3; BJI45_05510; phage(gi13095661)                  1.80e-27            LactobacillusreuteriMNDLVFMHGLNEEPYTTDKIISECSKNQLDNVKHLIRNHKRDFEEFGVLGFEIRKLNGRGRPQKTYHLNEQQATLLITYLDNTPEVNQFKKNLVHEFYRMRKELNQRQINRAIEKPQRKSLMDAVKDWSHVTQWSYRNMTQLLLKRATGLTAQQIKKQRHVKIALDGLTLKEQERYKQLENIAIGLVGLNKTWDEVKGVLLLA
397417..397692                     PHAGE_Lactob_Lj965_NC_005355: hypothetical protein; BJI45_05515; phage(gi41179256)     4.12e-06            LactobacillusreuteriMESLQVQLPNDLREATKAMIGDALSEAIKDAQNKNSFPPYLNKGEASAYCGVSRGIFNAWLKKYDIPTIKIEGVSRFRRKALDEFMQQHEK
397887..398201                     PHAGE_Strept_M102AD_NC_028984: hypothetical protein; BJI45_05520; phage(gi971763197)     1.36e-07            LactobacillusreuteriMKQLDKEEQQLLDLLPKGIERPRPLKELVKLTGWSNRRVRGIINRLIVIHHQPIGAKYEHPNNGYYIITNNKERQQALAPLTSQITMMSKRAEIISNAELESEE
398371..398640                     hypothetical protein; BJI45_05525                                                    N/A                 LactobacillusreuteriMKKFNIDQVEDANITLDTVLGLAQTINDLLEDNVSLFTEYPSTHKGVKWQADNLVTKLLALAKATITATTNAQNQIETVAEDFYKGGNK
398640..398924                     hypothetical protein; BJI45_05530                                                    N/A                 LactobacillusreuteriMTKNIDDLIADHETMSGLISSLIDYQERLNDYLTPCLKDDYTHNDLISLVLTVNYQKDIISSLHECLERLNDNDLEALQQLATLELKGGDAECN
398915..399385                     hypothetical protein; BJI45_05535                                                    N/A                 LactobacillusreuteriMQLVTLTTPDGHRERWDIKTTYLALLSWYSYLKDTDNAKEPTELATRISKFVGGDIKQVHTFLVYLDGFNGDLYSKLSLLTNNDDKNTTRLYFIMKSINNHDYLSHNKKKEREREKIIDRIEQVTSNDENTLKRLIRLTKLFVDGQLSYKNMEVCK
399385..400431                     PHAGE_Entero_vB_IME197_NC_028671: replication initiation protein; BJI45_05540; phage(gi966198985)     2.41e-18            LactobacillusreuteriMAERRMISRKIAEDDRFVDMHPVSKLLYFYLVLNADDDGFVGSVKMINFLTNADQSNYDELLENNLILEPTKSGVYVITDWYAQNKIEPKIYKATEYLSVRALLFIKTNFAYTTNPDEKDIISPVDYWIKQGRDKKTPPEIQAQQYLEQFQETSKKVPRSVEETSKKVLAQNRLDKNRLDKSRLEQNRPDQTRKEKISKENNYKYINSSSNGGMGENLLNGSRSTSSIENNATTENKGNSAENSGVDNRVNNQLDTNNNQDNINSLFNYLNGISTTDIPKDNKRLANVFDMLIHNGYEIEDIQSGIDNIMNVANQMPQYQNEQSLTKLLIQHLPEYTKQILEQSSSND
403036..403051                     attR                                                                                 N/A                 TCACCCGCACGGGGAT

#### region 2 ####
complement(1440768..1442345)       PHAGE_Geobac_E2_NC_009552: putative recombinase; BJI45_10530; phage(gi148747753)     7.68e-33            LactobacillusreuteriMGKVRIIPAHQQKGNSVQPQKNRLPFEQLRVAAYCRVSTDYDEQASSYETQVAHYKELIQKEPTWEFAGIYADDGISGTNTKKREQFNQMIAACKAGKIDLIVTKSISRFARNTIDCLKYIRDLKAINVAIFFEKENINTMDAKGEVLITIMASLAQQESESLSQNVKMGIQYRYQQGKVFVNHNHFLGYTKDAQGNLVIEPEEAKVIKRIFYSYLNGMSMKQIADSLKADGILTGGKTKNWQSSGVSKILKNEKYMGDALLQKTYTVDFLSKKRVKNNGIMPQYYVENDHPAIIPKPVFMQVQQLIKQRQNGITTKNGKHRRLNGKYCFSQIVFCGKCGDIFQRNMWYRPEKVAVWRCASRIKRSKTGRRCMIRNVKEPLLKEATVEAFNQLIEGHKLAGKQIKASIMKVIKNSKGPTLDQLDKQLEEVQMQLIQAANQHQNCDALTQQIMDLRKQRAKVQSREAKQQAKLHSIDEINKLIEFHKYGLVDFDEGLVRRLVEKITIFKRYMEFKFKDGEVIRINK
complement(1442338..1443999)       PHAGE_Geobac_E2_NC_009552: putative recombinase; BJI45_10535; phage(gi148747753)     3.22e-30            LactobacillusreuteriMSTITKIQGYQRDVKQLRVAAYCRVSTDNIEQLESLENQRSHYQKYINNHPNWELAKIYYDEGISGTKLTKRNALKELLTDCRNHRIDLVVTKSISRLSRNTTDCLEIVRELQQLNIPIIFEKEHINTGEMASELFLSIFSSLAQDESHSTAGNLRWAIRQRFASGKFHVSSAPYGYSIKDGNLVINHTEAKTVRQVFQRFLSGISASQIAKKLNQKQVPTKRGGQWRSNTVINILRNINYTGDMLCQKTYRDDQYHRHFNQGEITQYLIEDHHPSLINHRSYHRAQVLIKEAAQKHHIEVGSHKYQQHYLFSGKITCGYCGTVFKRQTRPHKICWACQQHLKSAQQCPVKAVSEKSLEAAFCNIINKLVYSEKFLLRPLLEGLKEEANANSDGQLISLTKQIKTNDHKAETLTELMHASLLDKAIYVNQTAKLEQDTYQCREKIKQLNGQNTDSANNFEDVRALLRWCQQGQMLTEFDGTLFQEFVRQVVVNSSNEATFNLKCGLSLPEKLNKAATIEKHFYRDIIKQRYNDPIKQAEYLYSIIESEGDLIG
complement(1444035..1444268)       hypothetical protein; BJI45_10540                                                    N/A                 LactobacillusreuteriMAKKVQSVTHQPLQQASNKINSEQLMNDLHYQQSRQIIQELLKKGLITPDEFNQIDTLNKQSFSPLLGPGNVDTSRF
complement(1444736..1445614)       PHAGE_Strept_Scap1_NC_042042: DNA topoisomerase medium subunit; BJI45_10545; phage(gi100004)     2.70e-23            LactobacillusreuteriMIPGIDISEWQGHVDFNAVKASGVKFVLIRAGYGRSASQEDRYFAEHYTQAKAAGLQVGAYWYSYAISPEDAANEARACLTVLGNRHFDYPIYFDLEEQWQFHQGRAFCDSLVKSFCCVLEQNGCYAGLYISRSPLQNYISSAVAQRYAIWVAEYGPRCNYSGNYGIWQHSSTGSVPGVNGNCDLDYSYIDYAAVINKKQPITRKNPNELAAEVLDGQWGNGADRQQRLTAAGYDYAVVQEKVNRLLNRKSVDQIAREVIRGSWGNGNERINRLKQAGYDPTQIQKRVNQLL
complement(1445611..1446024)       PHAGE_Bacill_250_NC_029024: holin; BJI45_10550; phage(gi971766651)                   4.57e-30            LactobacillusreuteriMKTTSLTIINTCFGDVGAFLGWFLGGLDGFLYVLLIFMVADYITGVLCAINEHKLSSEIGFRGLTRKMLILLLVGIAHSLDVYLLKNGSAIRTATVFFYISNEGISLLENTSRLGLPVPDKLKSILQQLHDKDGDKS
complement(1446011..1446394)       PHAGE_Clostr_phiCT19406C_NC_029006: head-tail adaptor protein; BJI45_10555; phage(gi971821549)     1.02e-13            LactobacillusreuteriMQQQNKRISKIADIGELDRRITLMKKKYVGENPNTGMSMYKDVRLGDVWAKVSALHGQEYYTAVSVKLEKQLSFIIRYRDDVDEETNIWFEGRGYNIGFIDDVKYNHEYLEIKAEYSRGVDNPDEDN
complement(1446394..1446672)       hypothetical protein; BJI45_10560                                                    N/A                 LactobacillusreuteriMAAITLAEAKAYLRVDNTVEDDLITKLIGSATATVENVLRQSLSAFDPLPDDIHTAILYTVAYLYEYRETADFDAMIKFLRAILSPYRKEEF
complement(1446689..1447867)       PHAGE_Geobac_GBK2_NC_023612: minor capsid protein; BJI45_10565; phage(gi589893767)     1.85e-42            LactobacillusreuteriMSKITELQEKRARIWKQAKDFLDTKQKESDVLSAEDNARYEKMEQEVVDLGKEIDRRHKQAEIEVAMNQPTSKALTNSPIANQLPKAQEAYAKDFWQMMRGHAVVDALKEGTDPDGGFLVPDEFENQLIQKLQEANVLRTISHVIQTNSGEHKIPVVASEGTAAWLEEEVAYTESNTQFSQVSLGAHKLGTLIKVSEELLNDSAFDLMAYLSDEFGRRLGNAEEQAFLNGTGIGQPTGILTDTNGASAGSTAAKADSLTFDDLIDLFYSLKTPYRQNAVFLMNDDTVKVIRKMKDKNDQYIWQPSVQAGQPDRILNCPVYTSPFMPTLSASNKPVLFGDFNYYWIADRQGRTFKRLNELYAVTGQVGFLGSQRVDGKVILPEAIKTLSMAAK
complement(1447887..1448558)       PHAGE_Geobac_E2_NC_009552: putative Clp peptidase; BJI45_10570; phage(gi148747731)     1.92e-45            LactobacillusreuteriMKRFWNWSGPQNQRVLTISGTIAEDSWVDDEVTPQVFQDELSQVKGPIDLWLNSPGGDCVAASRIYTMLMNYPDDVNVKIDGIAASAASVIAMAGTKVSMAPTAMIMIHNPLTIVGGQKEDLDQAAQMLAETKESIINAYELKTNLPRAKISTMMDNETWMNVNKAIELGFADEMLGQNKNVTDCYSYSDKQSNLVLLNKLKPTTKTTISVKSLQKRLSLLSH
complement(1448555..1449754)       PHAGE_Klebsi_phiKO2_NC_005857: putative portal protein; BJI45_10575; phage(gi46402090)     1.67e-85            LactobacillusreuteriMSFFFGSSMAGQNVTERTAMQNTVVYACVRVLAEGLAELPLHIYQYTNDGGKQRAINHPLYFLLHDAPNPEMTSFIFRETMMNHLLLWGNAYAQIIRNGQGEITGLYPLMPDRMDVNRAANGEIYYTYTRNYDDYQAKNKSKQVILLSDEVLHIAGLGFDGLIGYSPIAMAKNAIGLSMAAEQYGATFFKNDATPGGVLEHPNVVKDPERLRKSWQSQFSGSNNHSIAVLEEGMTFHQLSIPPDQAQFLDTRKFQLDEIARIFRVPPHMVGDLDRSTFSNIEQQSLEFVKYTLNPWCIRWEQAMNQQLLSADDQRKYFVKFNVDGLLRGDYESRMNGYAIGRQNGWLSANDIRELEDLNRIPTNEGGDEYLVNGNMLPLNQAGNFYNSQPSKESEEPKE
complement(1449849..1451447)       PHAGE_Gordon_Nymphadora_NC_031061: hypothetical protein; BJI45_10580; phage(gi100002)     2.21e-106           LactobacillusreuteriMRKLKDYKPTRFMAKDSTYNKDAADFAVSFIECLCHTKGTWAGKPFDLIDWQEKIIRDIFGILKPDGYRQFNTAYVEIPKKQGKSELAAAVALLLCCADGEERAEVYGCAADRQQAAIVFDVAADMVRMNPALKKRCKILASQKRLIYEPTNSFYQVLSADAYSKHGFNVSGVIFDELHTQPNRKLYDVMTKGSGDARTQPLYFLITTAGNDEHSICYQVHQKAIDIMKGRKHDPRFYPVIYGAGRDEDWSSPEVWKKANPSLGITVKMEKVKDAYNSAKENPAEENTFRQLRLNQWVKQDVRWMPMDKWDACAFPVDPDELRGRDCYGGLDLSSTTDITAFVLVFPPRDDSEGYTLLPYFWIPEDNVDLRVRRDHVPYDIWKQQGYLQTTEGNVVHYGFIEHFIDDLGKKYHIREIAFDRWGAVEMVQNLEGMGFTVVPFGQGFKDMTPPTKELMRLTLEKKIAHGGHPVLRWMMDNIYIRTDPAGNIKPDKAKSTEKIDGVVATIMGLDRAIRNEDNGDSVYDGRGLLML
complement(1451515..1451721)       DUF5049 domain-containing protein; BJI45_10585                                       N/A                 LactobacillusreuteriMNRIKDELAKRNRIRQQVLKIRNTGEANMFDVENVKRLAYYYNCHDLIDYLNTDRAGYVNLILTGKFN
complement(1451724..1452344)       hypothetical protein; BJI45_10590                                                    N/A                 LactobacillusreuteriMEIKFNVHGQQRKELVTKLADYTHRKAEYQYTPTYAYQIGKYTVNKDGVLTSPDEIPANLLDYLEQQGFHPTEIIKLNLAYQRDKFTDQALDNLRHLIWAKGQLIKDACQLEALPLNVDEKQVSFDWFKEVKLDDALAYQQFVDKLVQYAISHQRIMSEPHEESNEKYAFRCFLLRLGFIGPKFKDQRKVLLRNLTGSAAFKNQGD
complement(1452417..1453646)       PHAGE_Strept_EJ_1_NC_005294: transferase; BJI45_10595; phage(gi39653711)             2.59e-76            LactobacillusreuteriMCQFVKKKITDLIPADYNPRKDLKPGDPDYEKLKHSMKEFGYVDPIIWNQQTGRVVGGHQRLKILQDEGIKEAECVVVNLNEDKEKALNVALNKISGDWDKDKLALLMTDLQASDLDVSLTGFDENEISDLLSTADDTHDDDFDVDSELDKPTFSKPGDLWHLGKHTLLCGDATKTESYQKLLGDHKVNLVLTDPPYNVDYSSKAGKIKNDHQADDKFYQFLLAAFQNMNQAMANDASIYVFHADTEGLNFRRAFQDAGFYLSGCCIWKKQSLVLGRSPYQWQHEPVLYGWKKDGKHEWYTGRKESTIWEFDRPKQSKEHPTMKPIPLLAYPIMNSTMSNCTVLDPFGGSGSTLIACEQTNRICYMMELDPKYCDVIVQRYIEQVGSSKNVSVERNGKTILYSKVKKPA
complement(1453670..1454593)       PHAGE_Staphy_StauST398_4_NC_023499: putative transposase; BJI45_10600; phage(gi588498272)     2.09e-65            LactobacillusreuteriMGTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNGEYQAELAQSDFERKVGQRGRKSSLTKNLKHLIEEKIQTQKWSPEQVAHVVGIAYKTVYNWIDQGLLDVQLPDLPDHGIRRHRAKEKRGTFSHGRSIEERPHKIETRQEFGHFEADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQAIEQLTGTQVYFAHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDYQLVQINWYLNSRPLKCLNWHTPIEIFLLNLRH
