gi|00000000|ref|MNLH01000001.1|  Gardnerella vaginalis strain KA00225 Contig_1, whole genome 458962, gc%: 39.50%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
371057..371070                     attL                                                                                 N/A                 TATTTTGAGAGTCA
383060..385543                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; BFS05_01450; phage(gi371496158)      7.89e-21            GardnerellavaginalisMRNINTNCSTTGNTSCNTNVNTNCITACNTTGISRIASRSNTNASQEIKADFTTPVILRDICFSYDNGNTWILNNVNLTINSGERVAIVGANGSGKSTLSKIISGLTAPDSGYVHLCGEKVFDNTTAHSLAYKEARKHIGTLFQSPEDQIITTVVEDDIAFGLENLQIPREKMQNRISKALQAIHMENKRYANPSSMSGGQQQKIALASSIAMNSQLLVLDEPTSMLDTYSRKSVDDLLNNLHKNGTSIVQITHSLEECKNANRILLLENSKLKEISFEDLETHFSNINSANNNFIKISERKNSTENSNCVNKSDDAIKISNLTVKYDKTSPAVIDDYSLTVKSGEIVAIISKNGSGKSTLAKTICGLLKADSGTITVDGIPVTGKTSRDDRRKLRSTIGYVMQLPEQQLFADTVRNDVAYGPQNFGLKGDALKRRVDETLRLLHIEDLAEKSPFALSGGQQRLVAIAGVLACKPRVLVLDEPTAGLDFEAASRILDILYTLHNQGVTIVLITHNIQEAKALGARIVSIEQSGNKNNQVDKNHQVDKNKVYKNQKDKRKNTSNIKPAERPEKSLLAYFDPRVTLFSCFIIMLSAFSITNYTQLTILAIATILLTFIARISLIKLLSSLHMIIAVFIFSGLLNILSVRTGTVLANIATIPITSDGINYSILFATRFSLVIIIGAIVVLTMSQTVLTESCARLLSPLKHICIPTQEISLIMSLAMRFLPTLASEAHAVALAQIARGSSIHDGSFKQRIHAITAIIVPGFASVIRHADTLALALDSRCYTPGAKRTHLHTWRVRIKDIALLVTSLIIVSAIIACKILYLY
386030..386335                     ribosome assembly RNA-binding protein YhbY; BFS05_01455                              N/A                 GardnerellavaginalisMALTKKQIKQLRALANTLSPLLYVGKNDITDAAVKQADETMQHHELMKCAVQDGSGLSAKEAADALAEKLGAEVVQVIGNRFVLFRVSTLDNVEHIVLVRE
complement(386559..386881)         IS256 family transposase; BFS05_01460                                                N/A                 GardnerellavaginalisCTHPIPPTNNAIESMNSRIRDMLRNHRGLSLLKRIHAVCWWCYLNTNEPQDKSWIIANSFTSECIEQLYQQAWERSEQGLSEVFGIPASMVLVLIGMSSIRVVNTTSAG
387252..388019                     hypothetical protein; BFS05_01465                                                    N/A                 GardnerellavaginalisMSKKKMYISLGTLLLLVLFVFTGIFIIGNNPASKNSGNIANKLMPVNVAYAETLDDIKGSMNKLMVELETETKTNPQVAMQAHPGKFIRNSKNYQRILKLGLKAIKPLYDAIYDSRDAGCYEYILAMAIEDITGEKFVYNSDYGWKNSLEFRMAYDEKVNNTRFNVERISNNETLNDHDRTQKFKELGIFAVSDLIKEYRKSDSKVSKPSILEAVKGITSKYKELAITERTPTESILDETQLFDSLVSLNGRAYK
388136..388879                     PHAGE_Geobac_E2_NC_009552: putative Clp peptidase; BFS05_01470; phage(gi148747731)     1.58e-54            GardnerellavaginalisMRKFWQWKNQKENNETNENNEIFERTLFLNGTIAEESWFDDDITPQLFKDELNAGSGNITVWINSPGGDCVAAAQIYNMLMDYKGCVTVKIDGIAASAASVIAMAGTKVYMSPVSMLMIHNPMTVAFGNRSEMEKAISMLDEVKESIINAYEIKTGLNRVKLSHLMDSETWMDANKAVELGFADGVLTRGETTDIGIPQVSTLYSKLSVQNTLLEKISKACRISGKETNNISADDLMDRLFLIKNWR
388882..390066                     PHAGE_Azospi_Cd_NC_010355: Phage major capsid protein; BFS05_01475; phage(gi168495136)     1.56e-35            GardnerellavaginalisMMNTISNMVEKRNKAWQGAKAFLESKRDKDGLISEEDAKTYDEMEAKVKAYSKEIERLEQMEKMDKELSKPTSEAIVAKPMKTGVNLEKQGRARDEYKQAMLTALRSNFKRVDNVLQEGVDADGGYLVPEEYDNRLIETLKEENIIRSLATTITTSGEHKINVAMSDPAAAWIEEGASLNFGDSKFAQILLDAHKLHVAVKVTEELLHDNAFNLENHLLTSFGMALANAEEDAFLNGDGVGKPTGIFNKKDGGTFLKETTSIKTDDLIDLIHALRRPYRKNASFIMNDKTVASIRKLKDNNGAYVWQPSYQDDEPNRILGYPVYTSAYAPENMVAFGDYSYYNIGDRGSRSFKELTELFAGNGMIGFVAKERVDGKLVLKEAVQILPVKTSVAA
390097..390375                     PHAGE_Geobac_E2_NC_009552: putative DNA packaging protein; BFS05_01480; phage(gi148747734)     3.94e-07            GardnerellavaginalisMIVTVEEAKNYLRVDSKEDDELINTLIHSAEKLCQGVARKNDTSLISENFDEYRLAVLYATGYLYEHREEADHHALTLTLRSMLFTVRKTGF
390376..390708                     PHAGE_Clostr_phiCT19406C_NC_029006: head-tail adaptor protein; BFS05_01485; phage(gi971821549)     1.22e-07            GardnerellavaginalisMRISLLNERITLLKNSVEVDEVGNHKIKWSKYYECYATVSAESPSEQTSAGNVWDESKIDFTIRYSKETAAISSTRYRVIFHDTVYEILGVDHMNYKKKSLKLHCKRCKK
390705..391085                     PHAGE_Bacill_1_NC_009737: hypothetical protein; BFS05_01490; phage(gi155042941)      3.83e-18            GardnerellavaginalisMSKVSIGSLSKEVIRELKTYAKVTTGKVKEAVKTAGKTAKEEINMTAPKRTGAYAKSWAVKTLSETGSRLVLVVHSRNKYQLTHLLEYGHAKRGGGRVEARAHIAEAESKAVRSFEKEIEEAVKNG
391078..391416                     PHAGE_Bacill_1_NC_009737: putative aminopeptidase; BFS05_01495; phage(gi155042942)     9.41e-23            GardnerellavaginalisMGNLLNIMREIGFPFAYHHFAEGESPNPPFLLFLTPASSNFAADGKTYFKANEVHIELYADYKNPVLEEQVEAVLDRHGIFYNKTEAFIESEKLYETLYIFEMEVTINGKQG
391400..391972                     PHAGE_Bacill_1_NC_009737: hypothetical protein; BFS05_01500; phage(gi155042943)      4.88e-46            GardnerellavaginalisMGNKVKYNLKNVYAAKLKKDSSGFSYDEPKPIPGAVSISLEAEGESSPFYADGIVYFRSTANNGYSGDLEIALIPEWFRTEILREELDKNGVLVENAKISETEKFALLFEFDGDVNAIRHVLYNCSATRPSIESETKEDTIEPGTETLSLTADPREDGLVKSRSGDTTSKETYEKWYKSVYVPQVNTEIK
391990..392355                     PHAGE_Bacill_1_NC_009737: hypothetical protein; BFS05_01505; phage(gi155042944)      1.18e-16            GardnerellavaginalisMLEKTVKVNGKDVKFRSSATIPRLYRIKFKRDIFKDLSKLEQSFKNNEGVFEIADLEIFENVAYIMAYHADNSIPASIDEWLDEFEMFSIYEILPEILELWGANLETEVKSKKNLKQQHGK
392644..393300                     PHAGE_Clostr_phiCTC2B_NC_030951: ribonucleotide reductase A subunit; BFS05_01510; phage(gi100062)     3.29e-05            GardnerellavaginalisMIYSNERKLYLSGWLKNNDNTSYETPLKLQKFLLFYEAFTKVSGETPDFSHLRGYKKGPVFSNVWGDYTKERASFNVAAQNAYDKNVEAINVKRAEKCAFIVGTMTEKELSDLTHQMNLWKSKENRIVSGEYQVDLDESDFNYNDKKLIDALDAMYSTNMVENSKIINLDKKYFVFSKSDSELLTEKHFDMMLTLAENEELHNPVFVDIDEEGRLLID
393293..393706                     hypothetical protein; BFS05_01515                                                    N/A                 GardnerellavaginalisMINEKDVVRMKVPYPSISDGMAVASHMYICNKHSGTVYEYIKCQTLKPYMLIRNPMVHYHDEQPDISRNPFTRPTRIDCDKLFLTTTVHYDDRLKTLNRPDVCEDLFRSVRVELLKDGYTNININEIELKNLNRLIY
393792..396359                     PHAGE_Geobac_E2_NC_009552: putative tail tape measure protein; BFS05_01520; phage(gi148747742)     4.00e-43            GardnerellavaginalisMANRIKGITVEIGGDTTGLDKSLQQVNSTIRSTEQSLRDVNRLLKLDPTSTQLLSQKQAFLQKEIQETSNKLNVLKQADKQAKVQLENGELGKDKYDALQREIVETENSLDSLKEKLKQVGSVSLTKLSSQFDSTSKKIKKLGDGMSSLGQSLSTKVTLPIAAIGTAGFTAAADLQDAMGATEQIYGKSADRMLKWSGSLKSYYGIAQGQALEYANTMGAMLKNIGGKSDAEAAEMSQKLVALAGDLSAMFGGTTESAVLALTGALKGNNAMLDNYGMGVNEATIKAKALAMGLHDGRGAMSLQAKQAATLALIMEQTADAQGQAGREAAGASGSMKILKTELQNIAATIGNVLLPVITPLMQKISAWLSKFKQLSPESQKLIVTLGLIAAAVGPFLVVLGTCISKIGVAIQGFSKLALFIGKMFASFTSGSSILEGLGAVLGGVSAPILAVVAVIGVLVAAFVTLWNTNEEFRNSVIAVWEKIKETFTGFVNGVKEKLSSLGIDFTSIVEGLKTVWNGLCAILAPLFEGALNLSFTSFKTVLDLITGVLDVFIGLFTGNWSQLWNGVKEIFTAVWNAVKNTFITVFNTLKNVFNVFLSFFGTSWNKLWSSVKNFFMNVWNGIVSFFTNVLNGIKNTATSVWNGIKTAIMSVVNGIKTSISTVFNSVANMVKSVFNGIKNTVVSVWNGIKNAIITPIEAAKNKVKAVIDAITGFFSGIKLSLPHIKLPHFSIKGQFSLTPPSVPYLAIDWYKKAMNKPMLLNGATIFGEKNGRMLGGGEKGPEVIMGLDTLQNMSAGANTQMLSVMNQILAIMDAYFPQFSNQSIVLDTGELVGGIAHRMDSELFKLQTRKTRGW
396362..397024                     PHAGE_Clostr_phiCT19406C_NC_029006: tail protein; BFS05_01525; phage(gi971821558)     2.87e-06            GardnerellavaginalisMYGMLINGLHSFNDLGLVATSRPRVQLPEPKLEYLQIPGRQESIDISESLAGEVLYEMREGCFEFIVANKNKWSETCHRVKTLIHGKSVKLSLDDEPLFYYQGRMWVSGFKSDKNYSTLTLNYKLQPYKYSVDDSDGVHTIWGVQVDDKREITLVHDFDMTLIPEFNNLSSNSMLLDSNGKKYEIKTGVNRFPQLRSKISMSLTFVGNGMVNISYKRGWL
397037..399844                     PHAGE_Clostr_phi8074_B1_NC_019924: putative phage tail protein; BFS05_01530; phage(gi431810378)     1.27e-18            GardnerellavaginalisMLDGNTIYYPNDDKAVLDDITLNLELNTAGTLTFTCPSQNPCYELIKNRKSIVSVWRDDEEIFFGEVREQVKDLYGSKKVTCVGLLTYLADSIQPQKEYHDQSSYQLLEKLLQAHNSQVDDYKKIRIGFVTVSDSNDSLYRFTNFETTLEAIMGKMVEKLGGYLRLRKEDGKLYLDYLHLEEIGKATSQHISFGLNLLEYAENLSAEDVTTAVIPLGKELENENGENEVLKKHVDITSINNGKNYIVSREAQKTFGWVCKVINFNNVTVPTNLMRKATKWLQDNQFEHVEISLSAVDLSELGLHYATIKCGDRVRCLAPQFGMDRVFPVVKKTIPIQKPGEVRIVLASRISKGYVQNVSHAVQTLKEEAVEARKIDNERVKAAIDNIKAQMGNSQSGYKISEYDSKGMWVRDLYMDTPDKNTATKVLQVNMNGIAGSHNGFSGPYNTAMTLDGMVYGDRIIGHSIDAEKLSVSYTSQVEKQISKAKNEAIKDTGRRLENYYTISEINTKLNVTDGKIEAGVESVNHSLKQKNGNYYGSYTPSHFNAPMSLWLTDSEKMQHVGDFFYDTSTGYAYRLIVKQESLAVKFNEKSHTESAFDDFVDIFYKYEDKIYAIPGLTGEKISGATVFVPSSEFWLHFRTNWSPFDNYGFKIDSIKKEYSGEISGYVSKLPEDINIIEVEGENYPESEHPYKGGTSKLWHYVSADSISSFRTFDWLRVKDKDIEAAKFTADKAISKLTIVEDSISSMVKKGDFGSFMQQNYNSFLLGFNHSSKYVQITPGQIELYDGEVDEDHKRAVFDKNGNNFYRNGVYIGYVGTGEWEEDNSHKGLVFHLTNDGKYMAFAQRKTADEETYATMLCFSRSQSIYKEYGIHAGCNFYMHGNKIIDPVWQDGAGVDADINYVQIIEMNQDGKASKWGSNAHMVFKNGILMKVKYY
399892..400074                     hypothetical protein; BFS05_01535                                                    N/A                 GardnerellavaginalisMEKLIIHTNKIVANKGTRLKDVTESITTPVVDNTKILCEISHKLDIILKRLEESSGKTDN
400055..400426                     toxin; BFS05_01540                                                                   N/A                 GardnerellavaginalisMVKPTISYAVAVQKYKAELNEKIVELNKQIPIPTYMIEGIVASVLSDMRSAVIAENSMEYEVYVKQLEDYFNSRERELNDEILKIKAEKAEKDEKDEKDEKDEAAGKSVKDEMVDEGEKDGKE
400603..401022                     PHAGE_Bacill_WBeta_NC_007734: phage holin; BFS05_01545; phage(gi85701395)            1.91e-30            GardnerellavaginalisMRGFWNSAQLAFTLVGGWLGYFLGGCDGLILALVLFVVTDYITGVMCAVTDKKLSSSIGFKGIFRKVLIFMLVGIANIIDFHVLKQGSVIRTAVIFFYLSNEGLSLTENAAHLGLPVPEKLKNVLEQLHDKNRKDNTHE
401015..401788                     PHAGE_Geobac_TP_84_NC_041918: hypothetical protein; BFS05_01550; phage(gi100028)     8.94e-20            GardnerellavaginalisMSKKGIDVSEWQGDIDFNAVKASGVEFVIIRAGYGIGCKDKWFEQNYRKAKTAGLDVGAYWYSYANSGFEAAEEAQSCANMLSGKSFEYPVYFDLEEKSQLNRGRAFCDSLITSFCNKLETCGYYAGFYTSLSTANNLVSSHVRNRYALWIAQWNTHCSYQGSYGLWQYSSSGSVPGVAGRVDMDYAYVDYPSIIKNAGLNGCKNGGSDQAARTSSIDEVAREVINGAWGNGSTRKQRLTSAGYDYATVQKRVNELL
401940..402350                     RNA polymerase subunit sigma-70; BFS05_01555                                         N/A                 GardnerellavaginalisMNVEEKQQVKLLRDEGLSYTQIANRMDVSVNTIKSYCKRNSLGVIQSMKTQTELCESCSKPIKQNTGRKVKRFCSDACRNTWWNKHTQLVKRQANYECACLNCKNSFISYGNKTRKYCCHACYIEHRFGGEHHANK
402337..402549                     hypothetical protein; BFS05_01560                                                    N/A                 GardnerellavaginalisMQISNDVHGLKDVKARAWTKESMQADFRFEIAEKLTASLFKKGLISEQEKEKISRLNREKFHPFYKELLG
402611..404206                     PHAGE_Bacill_WBeta_NC_007734: putative site-specific recombinase; BFS05_01565; phage(gi85701406)     1.18e-40            GardnerellavaginalisMKEIIKIDSTMRKTGFEKKTRVAAYARVSSDSDEQLLSLEVQKEHYENYIKSNPCWEYAGLYFDEGISGTKIGKRESLKQLLKDCQSGQIDRIITKSISRLARNTVDCLEIVRKLTGLGIYLYFEKENIDTEHMSSELMLSILSSIAQSESKSISENNTWAIQKRFENGTFVISCPAYGYKNENKKMIIVPEQARVVKEIFNMALSGMGGEAIARVLTDKKIPTKKGGSWTSSTVNAILTNKTYTGDVIFQKTFTDDNFNRHKNCGEKQQYVIENHHEAIISHETFNLVKEIIAWRRSENNIVCGSGKYNKLYAFSGKIRCGECGSKCKRRIIYQHNKAYGIWVCITHLEDIHACSQKSVMESYLKISFLQMLNKLKAGYVQMLTPLVESLRGVNNKDGLNKVIELEEKIAKLQEQEQVLSKLLAGGYIEMDSYYLESNQLKTEMDTCLKEKLKLSNSLNGNLTHLNEVQKLQRFVSVTEVFSEFKDEDFLDFVDDVVVKSRTRFLFILKCGLELEEEVKETWHASHMVTE
417290..417303                     attR                                                                                 N/A                 TATTTTGAGAGTCA
