gi|00000000|ref|NC_000000|  Clostridioides difficile strain 5489-M/ST15 5489_contig000030, [asmbl_id: NC_000000].46490, gc%: 28.56%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(48..320)                PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; BGU05_16730; phage(gi90592691)     2.80e-56            MKYECEKVFLECDKGSFEINDTRTEEVTFEGTEIDNPFKRVKYEGKATFEIVSGWEYLQREMLWFKILHLSAVVAKIMQYKMLGILIREM
385..396                           attL                                                                                 N/A                 TTAACTTAATTA
complement(394..810)               PHAGE_Clostr_phiCDHM19_NC_028996: putative ssDNA binding protein; BGU05_16735; phage(gi971763933)     1.83e-99            MNTITLVGRLVADAELKYLPNSGTPKITFSMAVDRRFKDKNGNKITDFIQCEQLGKHVENLVQYLVKGKPIYAVGELNIYNYKDENGCWKSITKVNVNALELLSSKSDSNNHKEQQEYIPPGLDPQGFQAIDDDDIPF
complement(826..999)               PHAGE_Clostr_phiCDHM19_NC_028996: putative resolvase protein; BGU05_16740; phage(gi971763932)     2.41e-33            MARIYAQRSGSLNEQDRLELLRLLGKAGYIVKIAREKQNSKTTYTYFVEYTEEQEEK
complement(1058..1939)             PHAGE_Clostr_phiCDHM19_NC_028996: putative DnaD protein; BGU05_16745; phage(gi971763931)     0.0                 MGIIRVSKDKDNPYVVLNKTCLEDAKLSWQAKGLHSYLISKPDHWKIYVNDLYKRSKNGRDSTANILKELIENGYITRKPCRDSNTNKMLGGYDYEVYEIPLENPQKLKSRKTDFPETGFPGNRVSRKPENTEVVSNDFKVNNDITTIVINEQSNKDKTTYIKKYFEKYIGVITPNNFIELMSYLDDGMEADVIIRAIDEAIANGVKNYKYVKTILNNWIEAGVKTNLELTEYQNEFERKKKNKQDKKQSNSKAVNTPNVSKNKFHNFNETFTQYSPDELDDIIKKSQKVKFK
complement(1949..2557)             PHAGE_Clostr_phiCDHM19_NC_028996: putative essential recombination function protein; BGU05_16750; phage(gi971763930)     1.37e-143           METNNVYIKLVNIQNTLKAPKNQYNNFGKYNYRSCEDILEGLKPILKEEKALVILDDNIVQIGNRFYVEATATLIDAETGEKISTKALAREDETKKGMDLAQVTGSVSSYARKYALNGLFCIDDTKDSDATNKHGNEQKKKEVNESELNILYSLGESIEKDKNRVDSEVYKKFGKLAVDLTKQEYEKVLNGYKSILEKQKQE
complement(2567..3076)             PHAGE_Clostr_phiCDHM19_NC_028996: conserved hypothetical protein (Gp157-like); BGU05_16755; phage(gi971763929)     1.43e-113           MSTLYELTTDLLEIEEGLTETTGNEAEKLEEIKEIIKQEIQNKNTRIVSVILNIDSDINSIDSEIKRLQELKRVKKNTLDRLKSNIKDCMELLGTKKVETILGNISIRKSAGSLVIEDEEKIPAIYKTVEQVVKVDKNIIKDFIKKGHEVEGCRIEYGTTLTIPKAKKE
complement(3160..3477)             PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; BGU05_16760; phage(gi971763928)     5.70e-65            MKSLIIVRNAIEQQLNRANLEINKNEQLYTKLRKKEERDILEDIALSNALREKSVNERLKIFAESLLEIIDTQIEIKEYEESEDYKIFQLILEELERDIPIDVQI
complement(3480..3674)             PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; BGU05_16765; phage(gi971763927)     8.06e-38            MRIIYKNKVYKVEQDRKLFRITYYDEQKNNRKFNNNKKVKRSVLTRDIELVNLYLPSKLKIKGD
complement(3776..4105)             PHAGE_Clostr_phiCDHM19_NC_028996: putative repressor protein; BGU05_16770; phage(gi971763925)     5.07e-73            MSVALQFIDTKDLVQELMQRDDTTDIIKMFLDRKGIKRMNLVTLKEFKEYLKVSDVTARNMVKEAEAQNLYTVFKIAGCYRIDLISFEEYVMKNAMKDRDVMKKRKEVI
complement(4122..4319)             PHAGE_Clostr_phiCDHM19_NC_028996: putatve repressor protein; BGU05_16775; phage(gi971763924)     6.28e-39            MAINDSINKILRDRDLKAWKLAKEIGVDSGNLYAILRGENKNPTIDTLIKIADYLDVTLDKLAGR
4390..4572                         PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; BGU05_16780; phage(gi971763923)     1.44e-35            MQFSKDILHTLTLEILKEKYDFKNSSEEELLKHYHEIFLKLSEVNNSFSKGDGLSVFKQT
complement(4559..4756)             PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; BGU05_16785; phage(gi971763922)     2.75e-38            MKISFESVVNNVNNETELILSKEELQIAKRILNILNENEQSILSSKDILDFCKEALKYNLVPTFV
complement(4757..4951)             PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; BGU05_16790; phage(gi971763921)     8.68e-40            MKNNTIDSRVKYFCKCPYCGFDNEVEVKKGLKPKICCICTKEVEYEKLEQQSTPANIEIKGVCN
complement(5035..5790)             PHAGE_Clostr_phiCDHM19_NC_028996: putative regulatory protein; BGU05_16795; phage(gi971763920)     0.0                 MNNLQIFEKLEFGQIRMVEVDKKPYFVATDIAKCLGYANTSKAINDHCRWVTKSYIPHPQNENKILEVNAIPESDMYRLIVNSKLPNAEKFESWVFDEVLPTIRKTGGYIHTTEDMSDDEIMARALQVAQRKIESKNRELEEKNRFINQIASSKNSLLVREVAKVISKSNGIIIGEKRLYEKLRVWGLVFKNSTEPKQFAVEKGYLETVEGTRETSTGVFTYRTTRVTGKGQEYILKRLLKEEEEQLSMLS
6084..6395                         PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; BGU05_16800; phage(gi971763918)     1.16e-67            MTTITVRIYTPLNENLEKISYQTGILKSSLILYAINDIIRNSKVNELQSISYKSDDTVRSTLRIPGVLKELLEKTAKENNLSINSLINNVVHSFCISDWLIYL
complement(6594..6803)             PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; BGU05_16805; phage(gi971763916)     2.09e-44            MVNNLARYRKFMEMSQKEMATVANMCLTSYYMKEKGAREFTQAEMFNIYNCIKKRVPEITIEEIFYRES
6832..6843                         attR                                                                                 N/A                 TTAACTTAATTA
6893..6904                         attL                                                                                 N/A                 AAAATATACATT
6980..7375                         PHAGE_Clostr_phiCDHM19_NC_028996: putative repressor protein; BGU05_16810; phage(gi971763915)     5.43e-89            MTNTFGNRLKNLRSEKRITGEELGKILNVTKVAVSNWESDRRFPDQDTLKNIADYFDVSVDYLLCRSDARNTINDKVNTSNTTFDIIENSDANKKVKELMKKIYSLNDDDRNAIEKIIDNAYIIKTKKEEN
7979..8176                         PHAGE_Paenib_Harrison_NC_028746: toxin HicA; BGU05_16815; phage(gi971482391)         1.09e-22            MKSYSSREILKILNADGWYEVNCVGDHHQFKHPIKKGKVTVPHPKKDLPIRTVKSIFKQAGINIS
8217..8618                         PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; BGU05_16820; phage(gi971763913)     5.46e-88            MKKDIYVYPAILSYDADGISVEFPDLPGCYTCGDTTEEALKMAKEALGLHLYGMEDDDDIIPDATTIDNLNLEKNQIPTLIEIYMPIHRKAIENYSVKKTLTIPQWLNREAEKHKVNFSQILQEALKNHLNIH
8677..9795                         PHAGE_Clostr_phiCDHM19_NC_028996: puative integrase protein; BGU05_16825; phage(gi971763912)     0.0                 MNIKSAFIRKRGEKFHVYVEYVEEETGKKKQKSYGSYEKKKDAEKHLIEIKSTINNNKFVAPNSVTLVERCYIYLEEKKDNFSPYTLRNRRSVIRNHIEPFFGDMKLIDISPNILQTYVNKIYKKYSLNSAKNSISFLTALLHEAYRLREIQEDVSSFVITPNKKDASVTNFYTKEEAQLLLERCLDTDLAIPIYFMLGLGLRFGEAVGVRWSDVQLSEGIINVRQTMVHVDGKVTFKSPKTTKSKRRLTAPAELMVLLKEEKLRQNKLKLQGILKNELDLICLNKKFQPWTQQKFFKPFKRLLESNNLRYIKLHELRHTNATLMLLSGTNIKTISERLGHTDIKITMNKYSHVLEEMDKEASENLSKILFK
15901..15912                       attR                                                                                 N/A                 AAAATATACATT
