gi|00000000|ref|NC_000000|  Clostridioides difficile strain 7481-NonSp/ST59 [asmbl_id: NC_000000].19196, gc%: 29.68%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1..284)                 PHAGE_Bacill_Eldridge_NC_030920: sigma factor for late transcription; BGV10_12135; phage(gi100065)     3.42e-05            MTQRLMYEDVKEFIELNSECILLSKEYKNNSSNLILKCKCGNVFERSLDTFKRQKEGMRLCQKCSIVKKAKSNTFSFEEVKDFINENSLCTLLS
complement(615..1433)              PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; BGV10_12140; phage(gi640884877)     4.23e-78            MMNNLQIFKNEDFGEIRTIDIDNEIWFVGKDVAETLGYANPSKAVSSHVDDDDKIFEMIAHSQNGNMVKTQTALINESGLYSLIFGSKLETAKNFKNWVTKEVLPAIRQTGAYITNNADPDKLREKANEIESLDTVNKTIEILTPFLDNAGIDEKAKLLTAKTIYKKAGIELPLEIEEKEHFFDTVQIATKLNIYSKTNNPAFMAVCEIIKKLDIKEEEKLIVLANKKGWNGTTTKYSQSVIDKIRNWIEENNSPTKIPGEKKNFHVVYKIE
complement(1560..1736)             CopG family transcriptional regulator; BGV10_12145                                   N/A                 MPQKKMGRPTESVKDTMIRVRADKDTIDKLDECVNLLDSNRSEIIRKGIDKIYDDLKK
complement(2148..2924)             PHAGE_Clostr_phiCDHM19_NC_028996: putative tail tape measure protein (partial); BGV10_12150; phage(gi971763886)     4.83e-23            MGLFSAKEPCVICGKETRHLKISDGYVCGDCVGKCGIWLMLFPKKGKEMTKEDVISVIKRNEQREKELESFTATKKIAKYLQIDEPQKKFIIPSEYGKVGNVVLSLNDILEYELLEDGETIIKGGLGRALTGGILFGGVGAVVGGVTGKKETKAVVNNLRIKITLNDINTPVLYIDLIKSPTKKNSIIYRSNYDIAQEILSVFSVIENNNKNENVQQNNINQTPNNSLEQIKTLKELLDMGAITEEEFNAKKKELLNL
complement(2996..5800)             PHAGE_Clostr_phiCDHM19_NC_028996: putative tail tape measure protein (partial); BGV10_12155; phage(gi971763885)     0.0                 MSAGSRALEAVIRMRDEASRTLRQVRDATRALQNQTDTTSQAQERLQEQLKKVGEVASKACAGLGAGVLSIGGMAIKANEDYQKALNQIQASTGNTVQGMEHLKDAMLGVYKNNFGEDFADIANAMSIVDKSLVGTTGNIQSLTEKAIGFRDVFGYEVSESIRSADALMRNFGISGDEAFNLMAQGQQRGLDYSGELLDNINEYSVQFKKLGLSATDMFNLFESGMNAGAFNLDKIGDAVKEFSVRAIDGSNTTIDGFNKLGMNAEKMGAKFAKGGVDAKNAFYQVIDAIKNVNDPVKQSIIGVDLFGTMWEDLGPQVVTQLGSIKDKFDETKNTMNEINQIKYDSFSQGLQGIGRIINADVLIPLGQRMLPALNDFANWLKNDGVKSINSFANEIEQTIPRAIEVATKAFPLIIKSFKWILKNAPLIAAAFVSIKVASLMTTVVKSVLALKSAWKVAERAAYAYSVSLTFSANAGKIAALSMKTFHIVVAVLTKQMKVGAAVTALFGKASLLLGGPIGVIVVAVTALVAGFLVLWNTNKGFRDFVIGAWNNIKETATKVWGSICNFFTQTIPQAWQSLCTSFLNTRTWFVQMWNNIKQTFINGWNAIVAFFTQTIPSWINNIGIWFGQLPTKIGYGLGFALGKIISWGISVWTYLVTNVPIWINNIGTFFAQLPSKIWIWLVSTVQKIGQWGMAMITYAQIYSRMIINNIVVFFQTLPNRVWTWLTNTIQKVATWGSQMATKGKEGAKKLITTVVDTLKSLPQKVMDIGKNIVKGLWEGITGAGDWLKGKIGDFANGVISGFKDGFGVHSPSWKLRDLVGKFLPPGIWNGIKMTLPKLETNITGMVDSLVKRMYNPKEVEESNYTSKYKEAIAQRTEQNTINKSESKTTNKKEDNNITININLGGVTVKEEADINKLTKMLVREIQLGIAGGV
complement(5977..6447)             PHAGE_Clostr_phiCTC2B_NC_030951: hypothetical protein; BGV10_12160; phage(gi100045)     1.52e-24            MSENKLEKEIVDKKEATEVKNIVELLLKMDAGKIKMPSMTYKIFCKKVGIELPFECTALEPETFDELQSSGLKIENGSLKDLDNFKMKTNIILASCKTFKDKELLKHFKSPTPRELLRKMLLAGEINDLYNKICELNGYSESNSEKDKRIEEKIKN
complement(6479..6910)             PHAGE_Clostr_phiCTC2B_NC_030951: hypothetical protein; BGV10_12165; phage(gi100043)     4.20e-34            MATSFESKNVINGTFGECWLNEVQIAECKALKAEIKLDKAEIVRPRKMIKGQKVIGASAEGSITLYHVDSNMLKYITQIIKEGREPKFTIISKLADPDAKGVERISLTGVSFDGLSIIDWENGKEGEIEASFTFEDFEILDAA
complement(6925..7995)             PHAGE_Clostr_phiCTC2B_NC_030951: hypothetical protein; BGV10_12170; phage(gi100042)     1.46e-72            MAGLVNINIEFKELATSFIQRSKAGIVAIILKDTTKMYKELTSEDDIPISLSADNKKYIKYGFVGATDNEKVLRPSKVIISTFTEDGKVEDILEELESVEFNYLCMPEAIEAEKTKIVTWIKKIREEESTEAKAVLANIKADNEAIINFTENVVVDGEEITAEKYTTRVASLIASTPNTQSITYAPLDEVESIVKIDKASADAKVQAGELILRRLSGKIRIARGINSLTTLTAEKGEIFQKIKLVDTKDLISKDIKNIYVEKYLRKCPNTYDNKCLFIVAVQSYLTELAKQELIDSNFTVEIDLEKQKEYLEGKKIDVSKMKENEIKEANTGSNGFYLINLKLVDAMEDINIRVQM
complement(7996..8448)             PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; BGV10_12175; phage(gi90592649)     3.32e-105           MLSYKDILYSFTKELGNNFNEDIFVEGYNIQDNKKSCFFVQILPEVAQTATKKTDIKSFLVDIKYLPDWKKKKTDLFDILNKLENIFTRNIKVKDRYLTFSKKNGSIEKDEIGNYVQFLISINYHEQIYFEEEKHELMEELNMRFKGRSD
complement(8459..8809)             PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; BGV10_12180; phage(gi90592648)     4.81e-82            MSKNLRRAKNNIGNKLLRKVKPKTPVAKIDGGTARKSWKYKELNLFDGVVSNNVEYIHHLEYGHRTRQGTGTSENYRPKPNGISFVPGVFMLARSVDEMSSIIDDELNQIIIDFWN
complement(8870..9220)             PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; BGV10_12185; phage(gi90592647)     9.06e-81            MTEADILALTYFCKMTIRRCVSIKNEDTGVTYFNENVVIAEDVPCGLNGNIPNVIDTDITNSISVFELYCRPEIDLQVGDILDITLENGNVETFIASKPFPYSSHLQVNLTLKERY
complement(9300..9572)             PHAGE_Clostr_phiCDHM19_NC_028996: putative head connector protein; BGV10_12190; phage(gi971763876)     2.20e-56            MLDNIKLILNLKDDTYDNLIELYIKKYTTLVLAYCNIETLNSALENIIEDKVIVKLKETILSSSDTSENNKISSISRGGYSVTFNVATAKT
complement(9601..9822)             PHAGE_Staphy_CNPx_NC_031241: hypothetical protein; BGV10_12195; phage(gi100008)      3.01e-05            MFILIKENIERRVEDSILKDKLIQDGFKLLEDKKNIDIENSTLEELKSLAKENDIEGYSKLKKDELIEKLNNI
complement(9835..10773)            PHAGE_Clostr_phiCD119_NC_007917: putative capsid protein; BGV10_12200; phage(gi90592716)     0.0                 MANTLAYGQVLQQGLDKQATQELLTGWMDSNAKQIKYEGGKEVKIGKLSTDGLGDYSRGSANAYVGGDVKFEYETKTMTQDRGRKFTLDAMDVDETNFLVTATTVMGEFQRLKVIPEIDAYRLSRLATIAIGIKGDTNVEYSYSVNSSTIINKIKTGIKIIRENGYNGPLVCHLTYDSMFAIEEKVLEKLTAVTFAQGGIQTQVPSIDGCALIKTPQNRMYSSILLNDGTTSNQTAGGYLKGTKALDTNFIIAPVDVPLAITKQDKMRIFDPETNQTANAWSMDYRRYHDLWVTDNKANSVYANFKDAKPVG
complement(10797..11393)           PHAGE_Clostr_phiCDHM19_NC_028996: putative scaffold protein; BGV10_12205; phage(gi971763873)     8.97e-138           MEWLRKILEGIKIEENKFDIEEILKSVNTEFPKHAVPKETFNKVNEQLKEADKTIKSFNSKMTQEDVEKLKTEHQTEIKKIEENHKLEVEKIQNESLKTRKLSAVEKALLTNKAKHTDLLTNKFDLEKITIGEDGKIVGIEEQLKGLQESYKDLFESSTTETTTQTNTPFYKYIPGGSGETNETANMETVVNEILGVK
complement(11514..11744)           PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; BGV10_12210; phage(gi971763872)     1.23e-48            MKEYIIWFKSGNSISGIVDEDVADKLMKDFMEADSDCRYLKGYLDEDGTTIIDLSQIEAISINNCSENNNIGFSKS
complement(11786..11980)           PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; BGV10_12215; phage(gi90592644)     2.68e-35            MCILAQVIVVVCVVQIVINCVANVNVGILCNKLKKENKANIDKVSDEILKRVMEELNKSLDKSL
complement(12002..12631)           PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; BGV10_12220; phage(gi90592643)     5.55e-149           MAKFKKKAVEVEAFRLGYDTLPKWFIENDRVCNFIQEKCINGHVSCDLETLEGTMRANKGDYIIQGVKGEIYPCKADIFEMTYQKVEYTATIENLTNYAENLEQKNRYIDKEKVKKNNLELSAKIKLDTTDFEENIKSATKEIETFNEGVNRLEENLNRVFGKEKLNEIKIKIESPKKQLSDEDLEYIREIASKDIKARFAKEGKIKDY
complement(12699..13739)           PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; BGV10_12225; phage(gi100027)     7.52e-70            MNNNIEYWEEREKQRLNARLKDEKEVLKELDKQYKIAMKNIEKEIANLFYKYAKQNKLTYAETQKNLTNNEFKVWRMDIKQYIKLIEQTNDERLLLELNTLAMKSRINRLEELFYQISKEIYNTFDIQNNRVEKLLEESVKDSYYKSIYETQKFVGVGTSFSKLDKETLKDIITYPWSGKNFSQRIWKNRDLLSEVIKEEITQMVIRGESLKKIANRVSGKMDSSYENAIRLVQTEHSHFMSEADKKAYESQGVDKYQFLATLQDNTCKRCRNLDMKVYLVKEAKEGENYPPIHPRCRCTTIPYFKHEKGETRTARLPKGKTYEVSANLTYNEWYKEHVIKNIEVV
complement(13752..15107)           PHAGE_Clostr_phiCDHM19_NC_028996: putative portal protein; BGV10_12230; phage(gi971763868)     0.0                 MELEKIRAIISADAARRQEILQAKSYYYNKNDILKKGVVVQNRDENPLRNADNRISHNFHEILVDEKASYMFTYPVLFDIDNNKELNEKVTDVLGNEFTRKTKNLAIEASNCGTAWLHYWIDEEYSGEQVINQNFKYGVVNTEEVIPIYRNGIERELEAVIRYYVQLEDVKGQIQKQAYTYVEFWTDKILDKYKFFGVSCCGSQIEHITVQHRFNSVPFVEFSNNIKKQSDLSKYKKILDLYDRVMSGFANDLEDIQQIIYILENFGGEDTSEFLKELKRYKTIKTETDSEGDSGGLKTMQIEIPTEARKIILEILKKQIYESGQGLQQDTENFGNASGVALKFFYRKLELKSGLLETEFRTSFDKLIKAILYFLGVTDYKKIQQTYTRNMMSNDLEDADIATKSVGIIPIKIILRHHPWVDDVEEAERLYLEEKKIQASKVSDDYNNFAE
complement(16148..17515)           PHAGE_Strept_9872_NC_031094: hypothetical protein; BGV10_12235; phage(gi100002)      1.65e-175           MDKKLIQLEAKKELARREFFYFCNLLAPNFYKEDRAYLVETCNKLQDFYYSDDEVLIINMPPRHGKSRSAGLFVEWILGKNKNEKIMTGSYNETLSTMFSKNVRNAIQEEKADIDTIIYSDIFPNTKIKHGDGAMNLWSLEGGYNNYLATSPSGTATGFGCSLMIVDDLIKNAEEAYNENVLEKHWDWFTNTMLSRLEEGGKIIIIMTRWSSKDLAGRALEHYKEEGKKVRHINMKALQEDGNMLCEEVLSLNSYKSKVRAMGEDIASANYQQEPIDLKGCLYTKFKTYDNLPVDEKGNILFTSIKAYVDTADEGADYLCSIVYGVYNKEAYVLDVLYTKESMETTEYKTAKMFYENEVNKADIESNSGGRAFARNVQRILKEKFKSNKTIIKWFHQSKNKNARILSNSSWVMEHIYFPVNWRDRWQDYYKAMVSYQREGKNKHDDACFEEGTQIS
complement(17508..17960)           PHAGE_Lactoc_98201_NC_031064: hypothetical protein; BGV10_12240; phage(gi100030)     3.32e-59            MAKYEYWITEEGLIKIEGWARDGLTDEQIALNIGINVKTLYDWKKKYSNICNALKKGKEVIDRQVENALLKRALGYEYDEITYEEGRETKRVTKHVVPDTTAQIFWLKNRKPAEWRDKQIVESTNEITINNPFEELSTEELKRLAKLDDG
complement(18022..18699)           PHAGE_Clostr_CDMH1_NC_024144: putative regulatory protein; BGV10_12245; phage(gi640884940)     1.21e-164           MLKILQEKNVKVMWSKNGEEVWFNANDVGEELGIVNIRDTLRNIDREYKKKFNESTVGDSYTRNFKDKLPNFGTTFVTEEAVYNMSFRSNKPEAKLFTKWVTKTLKQIRIHGYYIATEKDQEWLDIRTEGKKVRKDFTDEIQEFVYYATSQGSNKPQMYYKHFTELVRKKLGIPKGVKRDELNQSELFDIQALERIISMKLPKLIDKDMNYKEVYKKIKELIEMI
