gi|00000000|ref|NC_000000|  Clostridioides difficile strain 7457-NonSp/novelST [asmbl_id: NC_000000].25434, gc%: 29.86%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(186..824)               PHAGE_Clostr_phiMMP04_NC_019422: peptidoglycan-binding lysin domain protein; BGU90_13075; phage(gi414090456)     4.43e-129           MEMWLRQSNDAFRFPILPTSFEISGSINTSTTNVLKLGEVIVCGGTGLRTTEINSFFPGKQYHFCNYKDFPQPYDCVNKLKKWMEQGLILRYIITETDVNMEVIIESFKHGKQDGTNDVYFTLSLKEYKRIQIPKVNTNNDEKLSSVKDVPLTKGFEVKKQRTHKASKGDSLWSLAKKYYGNGDLWKKIYDANKKLIKNPDIIQDGWVLVIP
complement(824..2578)              PHAGE_Clostr_phiMMP04_NC_019422: tail tape measure; BGU90_13080; phage(gi414090455)     0.0                 MARRHIGAVISLKDNMSATMRGIRREQKQFQNEVRRTRNEMRSASRERMRIRMDATPAHRTIQDLRRKFAPLRTKLVKAVVIKDLATEKIERIKSNVKSFGKFIARPVVKLKDETKGMIDKIKNRLTSLSTIVPVGAAVGAAGMAVKSGMELEQQQISMRHFMGVGNKGKSSKELDGMSASYLKDLRNNANATPFETGEVISAGTRSLQIAGGNTKDAMQMVKLAEDMAALNPGKTVGDAMEALADMNIGEMARLTEFGVKASSTDDPKEVQKKLETMYAGGANKLAESGSGLLSTIMGKLKSNIADIGLGMLEPLKPVMTGLIGFIDQASPKILEVGTKITSGIGMAIGWIQQQMPTLAPIFQTAFGAVSSIVSTVAPIIGQVIGALSPVFMGLLSVASSALSGIASAVKTVAPVVSSLISKLAPIFLNVGSTLKSMGKIFKNVFDSVMKIVKKASDFIKPLINGIIGATKGISDGVSWVAGKLAGNATGTKYWSGGLSVVGEHGPELVSMPRGSKVFTNAESKSMINKSIPNLRQVQGGNTNCNITIPKIAEAVIVREDADIERITSSLIKKIQMAKMGGVV
complement(2571..2750)             PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13085; phage(gi414090454)     5.39e-32            MEMQMISHYLEKGVDLDKLTNLNMIEKNFHIACMLYEEEEKIKLISELIGAMFGGVKNG
2621..2635                         attL                                                                                 N/A                 GTTTTATTTTTTCTT
complement(2762..3145)             PHAGE_Clostr_phiMMP04_NC_019422: XkdN-related protein; BGU90_13090; phage(gi414090453)     9.35e-71            MDNKKEMVTIEDILRRKEYFAKKSEETKQLYIPSLDGNIEISKPDRMLCLDAIEMEDAVEGDKYFVYEIVKSPNLKSEKLHAEFGCKDNPLDIVDVLFEAGEITDIVKIATKFAGFGVVEEIEDLKN
complement(3188..3637)             PHAGE_Clostr_phiMMP04_NC_019422: XkdM-related protein; BGU90_13095; phage(gi414090452)     5.78e-44            MGKENIVGSSQISGTWGKLWWDGTLIAEVLSFEAKVTANREEIQFGMSKDSKITSLSGEGTVKLGKVYSRGKKKLLEAWKKGEDPRSTLTSKIKDPGTPGKQAETVTINNVWFNELALAQFEKGGKIEEELSFGFTPNDSDMMDEIEEI
complement(3651..4718)             PHAGE_Clostr_phiMMP04_NC_019422: tail sheath; BGU90_13100; phage(gi414090451)        0.0                 MGLPSAIIEFQRRSRTVKFRSRRGIVALILKDSTAIKKSYSIDFLTDINETEFTKENYDYIRLAFLGKPSKVIIEVINDSVDSERSLDDALKALRENKFNYLAIPFISEEVDKTKIVNWIKTARREKEIYKAVLPSVTNANEKAIINFSTTGIKVGEKVYTTAEYTARVAGILAGISLSESCTYFVLDEVTEIEPTENPDEAVDEGKLILINNNGIRIARGVNSLITSSKEDTEDLKKIKIVEAIDMIQDDILQTWNENYVGKVTNKYDNKILFLSAVNNYFKELQRDEVLDNSQEAYAQIDIEAHKKYLKEKGIDYSEMTEQQIKEANTGSYVFIEGNITVTDAMEDLKFKIYM
complement(4735..5151)             PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13105; phage(gi414090450)     8.30e-88            MLKIVSVKKAIVEKLKSLNIKIVANEIRSGFEKPAFFIQIIPIEMASDPSFSNSTLLVNIHYFSKEKTELENLKMIDKLNILFQDCILEIDGGELTIEEKSVEIYENVLQYKFNLQVVEIIEEDESKYEFMEELEMNI
complement(5163..5576)             PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13110; phage(gi414090449)     1.38e-83            MSSTDFNTNGLDDYTNKLFRRIAKEYPKKAEKLMNVSLGKCKGEAIARTPKSDKKPKKYKRAKHMKDNWKTKVQSKNGNFVGVLKNDSPHAHLIENGWVTKNGGYVEGTHMLQQTMEHQRAKIDKRIEKMVDETFNL
complement(5569..5907)             PHAGE_Clostr_phiMMP04_NC_019422: head-tail adaptor; BGU90_13115; phage(gi414090448)     1.29e-73            MNVGKLTQRIEIQIYGEIENDIGEITKGWSTYKKLWANKSLLRNSNNYVLDKENIEYSYRFKIRYRTDITEAMRIVCNDVIYDIKHVNSIKELNKYETNIDCILYKEGVYNE
complement(5909..6196)             PHAGE_Clostr_phiMMP04_NC_019422: head-tail connector; BGU90_13120; phage(gi414090447)     3.29e-59            MIVSLEEIKEYLRLEADYEEDDNLLLSFLKAAEEDLENRTGKVFNENNKSELVSLYVKMYVAEQYEKRGATESNSEKVRFVLENIISQISICSRY
complement(6206..7474)             PHAGE_Clostr_phiMMP04_NC_019422: major capsid protein; BGU90_13125; phage(gi414090446)     0.0                 MTREEYFKKRQEMIDEAQKLLDDEIGEEGTGEEKTEEAEKIANKIKALDEEYERNVKARANLRALQDDFKVNPTIFNLTNNKGKIEGIEGTVVKDKQEQYKNAWAKDMLGKPLNLEEQEIFNSINSEYRAEVQTSENNTILIPKTVASGIWKEIGDMYPLFGDASPTFVTGDLTIIAEEDGGDDAAWYDEETEVKEDGYKLKEITLRGCELAKDITVSWKLKKMSIDEFVPYITTLLAEKMGVALAKAIVDGKGKPGESDSFKPQPLGIKTALTKEVSKAQIIEYTDKIAYTDITKMMAVLKKWSNGACIYANSTTIWTQLAEILDTTGKPIFIPDAVNSDGVGRMFGRVVKMDDSMVDGEVLAGNIAKGYAININENVTLYTDEHVKSRKTDYLTYSLIDGNVISNKAFSMIVKKTSAVTK
complement(7467..8204)             PHAGE_Clostr_phiMMP04_NC_019422: ATP-dependent Clp protease; BGU90_13130; phage(gi414090445)     1.79e-148           MANNNLNEFLKIKNSTETSSDLYFYGDIVCDEWDAWAEEDQYPLSIKNFLATEQGKDLNIYINSGGGSVFAGMAIYNMLKRHEGFKTVYVDGVAASIASVIALAGDKVVIPENAYFMIHKPWIGLWGAYNSDKLIKASQDLDRIEEGILNVYQDNLKEGIDIEEIKEKLNEETWFTGKEASNYFNFEVDEKKKVAACVSDYFTKYNKIPYALKNKTDKISIGKENNNKKRVQMKLNLLKLGGLND
complement(8210..9364)             PHAGE_Clostr_phiMMP04_NC_019422: phage portal protein; BGU90_13135; phage(gi414090444)     0.0                 MNIFKSKKKNKEAPGKVMMELISDSGNGFYSWHGNLYRSDIIRSIIRPKAKAVGKMTAKHIRSNETEFKTNPEPCIKFLLENPNPFMSGQMLQEKMVTQLELNGNAFAMIVKDDDNIPVKIYPLNALNFEAIYEDEVPFLKFLLENGKVVTCPYSNIIHLRKDFNETDLFGKSPAKVLEPLMEVVNTIDQGVVKAIKNSNTIKWLLKFKTALRPDDIKKEVKKFEKNYLQIDSDSGGAAATDSKYDAEQVKAESYVPNAAQMDKAVQRLYSFFNTNEKIIQSKYTEDEWNAYYESEIEPVGLQLSNQYTEKLFTKKERSFGNKIIFEASNLQYASMSTKLNLVQMVDRGSLTPNEWRKIMNLSPIENGDKPIRRLDTATVKGGE
complement(9380..11029)            PHAGE_Clostr_phiMMP04_NC_019422: terminase; BGU90_13140; phage(gi414090443)          0.0                 MTYIEEYYQKILNGEIVACSRIKQVYKKLVQDLYNPKENWVFDEELANRPIEFIETFCKQAQGKLGEPLKLELFQKAKHQAVWGFVDKETRFRKYQEVLDIRGRKNGKTTELAADELFMLIADNEGSPEVYNIATKYEQAQKGFKECYKMVQQSKILSKHIKKRKSDLYFHANYGFLQALASNSNGLDGLNSHMVTIDELAAIKNRDIYDLMKQSMGSRNQPLLNCITTNGFVREGIFDAQYEYACNVLDGKIKDDRFIAFIYELDDKDEWDKEECWIKANPGLGAIKKRDFLRDCVNKAKTDPSFKPTVMVKDFNMKENSATAWLRWDELNNETKFNVNEMEFRYGIGCFDLAETTDLASAKVLLKKRYDDNIYTLSMYWVPSERLKQKVDEDKIPYDLWEKQGLLRVCEGNKINPYDLLLWFREIKEEHDIYIPWIGYDPWHVDSSLLLAYENEFGKDAMIKVRQGVYTLSAPMKELRADLKANKVIYNNNPIDKWCLSNMEIKTDINGNIQPIKGMDRRRRIDGGVTLIIGYVVLKEKMAEYENMI
complement(11026..11394)           PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13145; phage(gi414090493)     4.72e-52            MIYEQLEKEKKIKQEVSRLKKNYKDLEKEKVKILDGLVNEAAFLKISLEETREILTKEGLTEIFKQGKQEFERERLQVKIYLNFMKLYSNVMKQLIDIIPSDMKQEEEDELIKFIKKGRLNK
complement(11513..11806)           PHAGE_Clostr_phiMMP04_NC_019422: HNH endonuclease; BGU90_13150; phage(gi414090491)     5.05e-64            MAREFSRSFYNSKAWKECRQSIIKKHLGLCAECGKLGEEVHHIKYLTPANIHDADIALGEENLILLCKDCHSKKHKSKKDITRAGLKFNENGELISI
complement(11806..12096)           PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13155; phage(gi414090490)     3.46e-39            MKEIELDDKEIKLIISALDLKISRNLDKAYNSFPYPFDEKEEYKRDVATMELLIDKFLSKLDEVECEEVDKEALVIDWNIEEFKEILKEAIEGVLI
complement(12293..12871)           PHAGE_Clostr_phiMMP04_NC_019422: integrase; BGU90_13160; phage(gi414090489)          7.78e-115           MKRTQEVLDIQDYLRYKSYRNYVIFMLGITTGYRAGDLVKLKVRDVKEALRRQEFTIMEGKKVNSKNIREKNRKPRTVEVRPKIAQILKKYIKDKHDYEYMFPSRKKKYPHIGVEAVSKALKEAGEYFGLCDITAHSMRKTYAYKIYIDSGKDIVAVKELLGHSSIEETKMYLGLDKELYHHYSESLDDFVR
complement(13065..13526)           PHAGE_Clostr_phiCD506_NC_028838: hypothetical protein; BGU90_13165; phage(gi971819958)     5.72e-95            MKIKKEYFDKVENALKMLGDKYRKLRVLKKEIAILKHKENYREINYEELGFKVQKSVKGIDDMVVTIEDAIYNKETEIEIIERKLEFYNIYLKELSEIEQKIIELVYFYSWDGKMPITKMARELKYDRTSLYNKKAIAINKIALMIYGDEALE
complement(13774..14034)           PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13170; phage(gi414090487)     6.51e-54            MNFKMIANIPGSWTVQKQFEKVLEEILELKEAIALDDNKKILEEGLDVFQAILTLFKIIGIHNIREGLKEHNKKLRRRKWKLEKID
complement(14152..14409)           PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13175; phage(gi414090485)     1.66e-54            MNKINVTQALEKFDSLLDKYNDLPDYVYTLEYRCKFYEWIRELERKKELKNYRIVNVLTAERNRETAPFWDLEKDVAKWIRKGKF
complement(14402..14677)           PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13180; phage(gi414090484)     8.05e-15            MNRFRLDEAISITRRDIKELSGYSNDIKECKKVKVTIIKKNGTKVPITFSNELLYDFLKKGFEISFKSMCEEAAETEKELLRIKEGSVRNE
complement(14737..15069)           PHAGE_Clostr_phiCD146_NC_028958: hypothetical protein; BGU90_13185; phage(gi971820196)     1.04e-69            MKIGKYLIVSQEQMDRNIECLKEEIKIRDDKIRLHECIMSNNEELIQILEEQLKEYKSELKEYKSELDVYSLFIDCILNKETRKAIAIYNRTKSIRIRQKCLNSIPIKKG
complement(15284..15997)           PHAGE_Clostr_phiCD111_NC_028905: hypothetical protein; BGU90_13190; phage(gi971820086)     1.24e-158           MLVDLFNKVMETGARKIETREVNGVTYTTDHLIPIHPKTVEEIELNTLDGLIEYIKSEVDKDTKGNRLIVQIKSPKNVRLCSELLEGGKRNTYVDCKALLPLIDFNFSLDTEEFNIMLQSSFVDTEDKKLLLKVSGNVKETSVKTVQDDGVSQVVAMSTGVASVEDVILPNRVSLKPYRTFAEVDQPESEFIFRVKEGITFKLIEADGGAWRLDAIKNIKEYLEKKLEGIENIDIIA
complement(16026..16439)           PHAGE_Clostr_phiCD38_2_NC_015568: replication terminator protein; BGU90_13195; phage(gi333798149)     4.20e-73            MISLETLCNGEAKEKIENGFIEIFKNMQDPNTPATATRSLTVKVTFKPGKNRSHVGTQIQVIPKLASVLPSETDIIVEKDFKTGEVNANEYGSQLPGQVKLGDLESKETSETDDKEVTKNDEVTENNVCKFKSLKDL
complement(16502..16936)           PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13200; phage(gi414090480)     3.39e-16            MIKVILCNTVDEYMEYERVEGAKDCYLIDMAISDNCTEKEAEKALNILQNSKFRIVSEAEKLNWIFGENFISKGLEQGIKEGSKIKRKICCERCGASVDSSEQLTSMPILSDYNNTQDVSDQLGNIDICPNCLLEVTHICNSPF
17286..17675                       PHAGE_Clostr_phiCD506_NC_028838: putative Helix-turn-helix domain protein; BGU90_13205; phage(gi971819949)     5.61e-87            MDMNNISPQSKRIRELRIELQLSQEDFAERLKLKRNTISLIENGKRNASNRTLKDICDAWSVSYDWLVNGIGNMFCAKDTDKEFAQLIGKLSKAENELERELILKMFKLNKKYLALFNNMLDSLLEIEE
complement(18191..20350)           PHAGE_Clostr_phiCD38_2_NC_015568: putative DNAse/helicase protein; BGU90_13210; phage(gi333798142)     0.0                 MKNVNKNNIDKMFLEECNTERAEHEKENYSEFNRHEIYEIKKYIDEKPLGIRTAIANAINGGKTLFIAPTGAGKSYSFINTLKKLKTKALFILPNASNVEQAMHEYNIAGAYDKIPAKQALEGNNLVVMTWDKTEQLINDDLSEYIIVVDEIHQTYTDAYRAKAIKNLNNIMTKCKGRIDITATPTKLEFEIYDYIIEYTQKQKTEYDVKLYNDFDNKNFTEIINIINKSNNSAMLMNDISTLEFIRDSVNKNAGVVYADGKEENELYNRIVKNSDMKGYETLLNTTTILAGVNINNKNITDIIIVNMKDVGAIKQYIARFRNLKKANIHIFNKYEEECNVYQIEWLVNKNIEKAMILKEAYNKVSKHMLHFETVGINATPIRMDSNVYYCTKDNCYKVDKLYIKSQVYSNYYNTRTVQSFKVLLEEYFDNVNITNTKEIETNEKELKEYKKVVKEIKEATRNILKEHKEILVGYRQIKSDSKSFSLMQYHNDMKLSSEGCLKAYKEYDIHNLVKKSKSNSMLELYSNYVLDNKFSLELAWKLANTANRKRGAIFNKLNTLIYRELKEEYPEFLNDELIQVTVFNYIDKIFGIGTSYTKLHLQELSNDLRIILGENWGLNTKKLEIMLNGIFVIENKNYRSGSVLENIFFYKNINPNTEPGSRIRINNIKRYITIDDIKKDLELDEKDKSLERAIKYTKERMLNSLDEEEKLLLLKGLM
20785..21507                       PHAGE_Clostr_phiMMP04_NC_019422: DNA polymerase III alpha subunit; BGU90_13215; phage(gi414090475)     5.83e-108           MFNSVKRFLKTLKEPVLTEFDIAKQYDFSKKLSDDIISSFKSKKEIEYEKFIKFTNSKSKVLEHYVVFDLETTGLDASKEDIIEIAAIKFERDVPIEIFSTFVKPSKSIRKNITDITGITDEDVVNAPKIEEVLSHFLNFIGDYTLIAHNAIFDMEFILDKLYKNGYKKITNKVIDTLALSRKYIRTYEGKKLKSYSLPSLHEELGLNYSSHRALEDCKSCSSVYKTCKSEMKFKDELVY
22519..23337                       PHAGE_Clostr_phiMMP04_NC_019422: ParA-like protein; BGU90_13220; phage(gi414090470)     0.0                 MSISLNTISIFNVKGGVGKTTLTILTAMYLSKLNKKVLIIDGDFQANTTQFIHNTLYEGNTMFEALAYKTKADDIIIKSPLKEFSNIDLIGSKLECCVLGELLVTETNREKAVYRWFAKNIDILSEYDYILIDLSPSYDVVTRNFLLISDSIITPLEYQDIASIRGCNLFYTKFKEDLEKLEIDNDVKKAIVVNRYTSRKLSTGDEFNNQLEKYEDMKKVLLNTRISEGTVVKNAILNKTDIEEYCKKIKKAHKVRGEFKNFMNELFERGIL
23341..23700                       PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13225; phage(gi414090469)     5.38e-72            MKFDLEENENKINYRDVTEKRIQDTFRKNSNSIVTSLLEVKENEEVKKESVSIYFESDDINVLKAVAQIKKTTINKLVLDVLRPVISATRTDLEGNENIEKLAKSYDKRKRGRGRKIEK
complement(23817..24614)           PHAGE_Clostr_phiCD506_NC_028838: Endolysine; BGU90_13230; phage(gi971819935)         8.56e-174           MKVALVPGHTLTGKGTGATGYIDEGKENRILTDLIVKWLKQGGATVYTGKVDKSSNYLAEQCQIANKQDVDVAVQIHFNANKTTLNPMGTEIIYKTKNGKAYAERVNEKLATVFENRGAKSDVRGLYWLSHTKAPAILIEVCFVDSKADTDYYIKNKNTVAKLIAEGILNKKIDNEGVKQMYKHTIVYDGEVDKIPATVVGWGYNDGKILICDIKDYVPGQTENLYVVGGRACEKIGSITKENYTMIKGNDRFDTLYKALDFINR
complement(24614..24871)           PHAGE_Clostr_phiC2_NC_009231: holin; BGU90_13235; phage(gi134287369)                 9.12e-43            MDNLISFIPEQLLLLVVALNVLGFGFKKYKQLDNKYIPIILLVLGIVFSIWMLGFNPSSILQGILCWGVAIGANQVYKQLKDGDK
complement(24891..25121)           PHAGE_Clostr_phiCD481_1_NC_028951: hypothetical protein; BGU90_13240; phage(gi971820125)     1.77e-47            MNEEVIKEKIKRNEIRINRHSDEIDELKIANIESKAELKALCENLNSLTSMLKWLIGTMITTLVGFFIFAIQKGIF
25088..25102                       attR                                                                                 N/A                 GTTTTATTTTTTCTT
complement(25157..25339)           PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13245; phage(gi414090466)     4.13e-33            MNINNVVVRILAERILNKGLNPLKNRPFELDDVTNTEYRKAVEDYIIKESGVVEGTEPTA
complement(25339..25434)           PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BGU90_13250; phage(gi414090465)     5.32e-12            IPVFVSEEEKRIQELENQLLIAENEKVGGIL
