gi|00000000|ref|NC_000000|  Clostridioides difficile strain 20110869 scaffold00059, whole [asmbl_id: NC_000000].79459, gc%: 24.91%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
complement(18155..18310)           PHAGE_Clostr_phiMMP04_NC_019422: hypothetical protein; BER30_004283; phage(gi414090473)     8.21e-13            MNEFLLSVLASLAASVIIYLISKLNKKVKSHSVRKSSFSFELKVKFKKNNQ
18821..19066                       hypothetical protein; BER30_004284                                                   N/A                 MIKFLVGKTYETSSICDRDCKFKIKIISRTEKTLVYEDEDGNRARTKIHKLEDINTEFIRLGNYSLAITFKADNNLINDCI
19083..19490                       hypothetical protein; BER30_004285                                                   N/A                 MYNSNINNRLIEINTNKCTLKNIEIVLMEGSKDYIKNFKIIYTKLLSLQLQSVSLQYFGNNIILITDTYSKTLELLDEELLKQYLHIKHLSSDNFDSDILENCKLESYKINKHLISNRIFRLIKNEIDCISLKKL
19508..19837                       hypothetical protein; BER30_004286                                                   N/A                 MKKNKISFRKWFKFYLIGCSCICIIVSLFMLIYFGSNRIETMETHSAYNFIESKIPTNAKYQGYKKNHINAKTVLYYSYKDSIHTVELYHPENNLNEVDWNEVTDIKFD
complement(20183..20713)           PHAGE_Pseudo_phi2_NC_030931: hypothetical protein; BER30_004287; phage(gi100012)     1.03e-08            MSDKITNRLCFLGEEKEIKEILEFIKNDEIGVGSIDFNKIISMPSWIYKGSLSKNECKKHRDENCWLEWCMKNWGTKWNAIGGIDKRSTDDTIYFFTAWSNVTQIIIKLSLIFPTVEIEYSYCNEEFGTGVGMIKFRNTRIIEEYIPNDYSKEAYEGSLEIEKSKPEDYNIIFDEN
complement(20785..21081)           hypothetical protein; BER30_004288                                                   N/A                 MEYIIHNKFDTNKFNIYKAIRLEYFDIAGWYKFSRDVLITNINETEIKFMYAVKDWNGLATSFGVVKVEDILREYIKIKFLEVVDNKKSDGRSKQHNK
complement(21110..22294)           PHAGE_Rhodob_RcapNL_NC_020489: C-5 cytosine-specific DNA methylase; BER30_004289; phage(gi461474996)     9.00e-85            MKELIIDNFAGGGGASEGIELATKRKVDIAINHDPSSIRLHKTNHPNTKHYCENVWDVDPVEATQGQPVALCWFSPDCKHFSRAKGKTPVDKKIRGLAWVAVRWASKVKPRVIILENVPEFKTWCPVKNDRPVKSKKGETFHKFINALERLGYKVEYKELKACDYGAPTTRKRFFLIARCDNKPIVFPEPTHGENKIPYIPASEIIDWDIEVPSIFNRKKPLSENTLVRIARGINKFIIEDKPYIVNKSAYFLTHYYTHQGLETRGSSLRKPINTIPTANRFGLVRVDFNDIRLPDNEELYEFLKYYGSEIGQSLNRELQKINDIGLRMLTPRELFRGQGFPESYVIDRDYKWNLYPKTEQVARCGNSVPPILSKVLVESNLPELCGISYSNAI
complement(22360..22935)           PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; BER30_004290; phage(gi981221006)     1.08e-09            MNIAKSKVKKCIRETIEVTSIENLKCCGFYIIEDKIHHYIHCEGQTLDENIYNGEYDYLYDYDDIIRIYNQKKFTLKDIDEKVFDKIQEMINKKEKYDTTIAMFIKSIKEINNKKLQICKFNGKVKKLYREYIGNFKKWSEFYEEDITEYKSHIYDLEEINLFLKVDFELINENKENLLKSTIKLYGIEIF
complement(23191..23529)           PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; BER30_004291; phage(gi100005)     2.04e-05            MSMTEKIDKLLNSKNITKSQLSKESGIPYTTISGFYVKGTDNVKLSTLKKLADYFQCSLDYLVYDDVGLNENIVFNGYINMFAKLNREEKELTYKAIRILYKNKEGINYIGN
complement(23563..24102)           PHAGE_Clostr_phiCT19406A_NC_030950: hypothetical protein; BER30_004292; phage(gi100005)     5.80e-22            MSEKDGIIRLNLIELRKILKLTQEQMSASLKISRSNYGNIETGKVGLTERVKSDICDIYNVNKEWLETGTGEIFSKESNCGKKINELRKNRNLTSEQLSELSNVPKGTLDKILNGTTKDPKFETLKSLARALNCTLNDFDDMNTINIDIKAKEFNYLFAQIDNETKDLIIGIMKKVLNN
complement(24140..24232)           PHAGE_Clostr_phiCD211_NC_029048: putative Helix-turn-helix domain protein; BER30_004293; phage(gi981221002)     4.96e-07            MCDIGKRIKILIENEKIKQVENVRLIKLKN
complement(24238..24618)           PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; BER30_004294; phage(gi981221003)     1.18e-78            MSDETISTRIRKIRKDANLSQPAFGEKLSVSKDVISNIEYDRVEPKPLLINHLCSVFNINKEWLINGTGDMYVSVEDDIYSTLGEVFYKIASSKDENLKELIINISKLDATYIASLNEIVKRSIQR
complement(24638..25006)           PHAGE_Clostr_phiCD211_NC_029048: Transcriptional regulator; BER30_004295; phage(gi981221004)     1.12e-78            MIDIDTNKRIKEIREDINLSQQKFGEKLGVSRDVISNIENNRVEVKTVFITHMCEVFSVNQVWLETGEGRKFIEQECDIVLGEVFANITVSKNENLKELIINISKLNDTYINNLNEIVKGLI
complement(25017..26462)           PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; BER30_004296; phage(gi981221005)     0.0                 MKEELNIIPFLAETLSTNKKCYKLIDKYYNENKLKYSNLAKENIFYDSRIASEGSIIQEYYFKKSLGILLEKDEKKITRIFKVGYTIAYNYIISVPIFKASTFLRKLMLKNKMEKFSDDELNGNMLVAISLCGALEKEVDESDEIYVKVIKNLILRNESYKCEKFFSIDKLSKEEQKLISKIELKLKSIYLKEYTPSSYAIRVNNESTGTFKIDDLSYLDRNLLCFDYVYDLEAISVISIVGKDIFKSKQIQELILCYCSLQNNIEDENSINYEDLLRFIIPAIDLRYLLVEYKKAKQFFFNNFDEELKESIEEKDIELITLKKENSLLREENKNIKLELELLQKDKLRLENEIKAQITSKEELVQLRNFMFSKQQEYIENIPTDERDLKNIKAIIFGGHPNWILKMKDKLINFEFISAETINFDVNILNSYEYVFINTNYVGHAMYYKIIENLNENNKLRYINNINIDRAIRDIKDAIKI
complement(26565..27164)           PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; BER30_004297; phage(gi981221006)     1.07e-63            MKRITKKEIKKYVREATSNNFNWKLSRCGFYIKNDKVQFFISYVGQGMDENIYNNDYEEIIYIEDIIEEYRRKEYNLEDIDTIIYENVNNMIYNYNERIEDIEDFIQEIKDSIGEEFTIFEYDNFVQGKHNHLSDKLDSWDYFTEGDINDYLESGSYTYIFFYEDLNRTVNLNIGFEVIERNEEEICESKIKIREIILL
complement(27429..27923)           hypothetical protein; BER30_004298                                                   N/A                 MFFTYGVGVLSKEKFNKPNATNKYNKINGGLWCCPKNNLYSEWFVVTLACPELVRDPVPYDIFISDNANILKLTSENISSYTDSNKYIDFNSVKMYDAIHFTKDLVEKVEEFKMYLVESIQILNFDIISYENCYVDEKYVLSENFIKNMNIVLDKIENIISFYE
complement(27953..28987)           hypothetical protein; BER30_004299                                                   N/A                 MDATRALNDIKKVLLKDMLDRYYNRIMFTSKLNIFSMDESIDKEYVDSIFKYAKIKRMKFLLDSCVEKLKNINDKDEEEKHIILISIETSIDELDDLILINYDIDKIKDDLKDDIDSSSIISISDIRKYKEIFERELENVCHEYVEKIENIIKTNREFLDNSIVYVTSFDENSFCLDKYKHESINKSDYNILFGILRDTKICKLSESSTIKMKFEYKINLNKLKKYNIKYEILNKKFVRTIELKELNDIPFELRKLNGKTFSSSSGYYVAKCDENGEIISFLTTIIGRSNSGATVTYKFEKYEFENGYYTVKYSEGRYADKEIYKYHNGKWYRVIYNKNIVYEN
complement(29066..30715)           PHAGE_Lactob_Sha1_NC_019489: minor tail protein; BER30_004300; phage(gi418489814)     1.55e-06            MDKKEEILKEIKKDPYFLKYVKVQTEDMCLLAVRCIGWTLEFVHNQTEEICKEAVKQNGLALKDVKEQTEEICLLAVKQNGRALKYVHNQTEEICKEAVKRNGLALKAVKEETEEICSLAVKQNGDALKYVKKQTEVVCKEAVKQSYEALQYVKKQTEEICIEAVKQNYKALQYVKKQTEAVCIEAIKQNRKAFELVDERTEAIYIELVRQNGLDLEIVDEQTEAICIEAVKQNGKALQYVKKQTEAICKEAVRQNGRVLFYVEEQTEEICLLAVKQNGFALKDVKEQTEEICKEAVKQEGGALEYVKKQTEEICLLAVKQYGGALKHVIKQNYEICKEAVKQSGWSLFYVKEQTKELCSIAINNKAYALTSVKEQTRELCLIAIRKEPLTLKYVREQTEEMCLEAVKRNGMALKFVDKRTEEICIEALKQDKHSILYIDDKEKYLKMFSDDIKFLNSLEQLKRDNKYKFAFSNIEFKEAEEEIQNIIAIKEDGKWLFTLCNLFYLDDGWKDMSKGRFIYKIYNEEGGYNIHHRVNLYRQIYLEFLEKF
