gi|00000000|ref|MUZP01000003.1|  Lactobacillus reuteri strain MD IIE-43 contig_3, whole genome 100212, gc%: 39.54%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
20502..21077                       PHAGE_Clostr_phiCT453A_NC_028991: hypothetical protein; B1A73_01935; phage(gi100017)     1.10e-70            LactobacillusreuteriMNLRRKNNMSQQTKVVTGINTRLSYANIWEPKSINGGKEKYSVSLIIPKSDQKTVTAIEKAIDASIQEGIGKFGGKKPNKATLKLPLRDGDVERDDAAYQDSYFINANSITAPQIVDKHVQPILDRDEVYSGCYARVSINFYAFNTNGNRGIACGLGNIQKIRDGEPLGGHASASDDFTAIDDSNDDDFLA
21133..23067                       PHAGE_Strept_315.6_NC_004589: putative DNA polymerase A domain; B1A73_01940; phage(gi28876473)     0.0                 LactobacillusreuteriMKQISIDIETYSSTNLNQTGVYRYADSDDFELLLFGYATDFGPVKVVDLTQGEKIPPQIIEALDNPNIIKSAFNAQFERVCLSRFVGHRLKPTGWHCSRVWSATLGLPLSLRDVGSVLGLPRQKITAGKELVRYFCTPCKPTKANQNRTRNFPYHAPDKWQQFKQYNQRDVEVEMEITQKLECFPVPQNEWENYWMDQDINDRGIRIDQQLVNNAIKCQNVFHDQYLQTAKELTGLANPSSPLQLKDWLQQQGIKTNSLSKVSVAQLLQTTTGTVHQVLALRQLLSKSSVKKYQAMQKAMCQDGRVHGLLQFYGANRTGRWAGRLVQVQNLPRNSMPDLEEARELVKQGNVPALAMLYDSVPDVLSQLIRTAFIPSKNHHFYVADFSAVEARVIAWLSNEKWRQKSFAKNEDIYCASASQMFGVPVVKHGINGELRQKGKIAELALGYGGSIGALKAMGATKLGLTDDELPPLVQMWRNASPHIVQFWWDVDKAAKECIKTHLPQTTHGMKFIYRSGCMFLRLRSGRYLCYPQPKIGINRFGSESIAFMGINTVKKWDRIETYGAKLVENIVQATSRDLLAETMRRLEATGNTVVMHIHDEAVIDAPFNRSLDTMVQLMTKVPDWANGLILNAAGFVSDFYKKD
23134..23538                       hypothetical protein; B1A73_01945                                                    N/A                 LactobacillusreuteriMKGSESMSEATIAITKLRQDKPNPHYRPMIFVIAPFTEVVKSDAESIRAVRSNCRFVYQHGGIPVCPQLYLPQFINLHHSREFQVAAFINIVLLTKCAEAWSFGKPTHDMRYFIRLAKRKNKNIRYFNNEMEAN
23541..25796                       PHAGE_Gordon_GMA4_NC_030939: hypothetical protein; B1A73_01950; phage(gi100058)      8.60e-55            LactobacillusreuteriMHFTLSTAANSGQASNTIYPHQQAITNAQELEQAVRYDHVCGQFQNNQRTIANFIKADCLIMDCDNDHSDDPTTWINPANIANYFDDVSYAITFSRNNMKAKHHKAPRPKFHIYFPITEITDAKTYTELKHEIQEYFPYFDDNALDAARFVFGVPSTKAIWHEGSQTVDKFMMVQRYFAQQNIGSIHEGKRNATLSHFAGRIIMRLGNTAEARQAFQEEAAKCDPPLSKQELKNIWHSATKFGQRMASQKGYIPPEEYNQPNDDLQPDDYSDTGESYVFVNNCKERVCYTNQSGFMWFDGKVWQESEPLALGEVQRFTDKQLTDAQLRVTNSYKKIQQNGVTSALQAMGKTKASRTFNDEQLAAFKDYENAKAYEAFILKERSTRGINGILTNSRPKLVKEINEFDANPFLLNTPTGPFNLRKGMHGQQEIQADELITKSTSCVPGNQGASLWQEALTTFFCGDQALINYVQEIVGLVAIGQVYLEALIIAYGSGRNGKSTFWNTIANVLGTYTGHLSADALTTGVRRNVKPEMAEVKGKRLIISAELEEGKRLNTSIVKQLCSTDEIYAEKKYMKPFSFTPSHTIVLYTNYLPHVGGNDEGIWRRLIVIPFKATIAKHNDIKNYAQYLTEKAGPAVLQWIIEGAQRTIQQNYQLTTPAAVTKAVRAYHADNDWLGHFLNENCELDPSYEQKSGDLYQKYREYCQGIGEYTRSTTDFYTALKNAGFQRQHKQNGRFIKGLRLKVDADEFLS
26010..26291                       PHAGE_Strept_315.6_NC_004589: hypothetical protein; B1A73_01955; phage(gi28876471)     6.20e-18            LactobacillusreuteriMLEKRIETAFVKATHQRGGLCLKFTSPSMAGVPDRLVLLPDGHMGFVEMKAPGKHPRPLQVQRLNQLKQLGYQVFVCDQFDQIGGMLDAIQTA
26272..27627                       PHAGE_Strept_315.6_NC_004589: putative helicase; B1A73_01960; phage(gi28876470)      2.48e-151           LactobacillusreuteriMQYKPHEYQQYATQFILDHPVAAILLDMGLGKSVITLTAIKQLIQQGKVQRVLVVAPLRVAKQTWPEEIEKWDHLKGLNYSVVTGSKFQRIKALQQDVDIYIINRENLKWLIESSGTSFDYDMLVIDELSSFKSYRSQRFKALKRVRPLIKHVVGLTGTPSSNGLMDLWAEFRVLDMGQRLGRFISSYRMNYFDPDKRNMYQVFTYKPKPGAEQSIYRAIDDITISMKSKDYLNLPPLTMNTVPVKMSNSEQAIYDELNAQLVVSTQGKQIDALNAASLSNKLCQMANGCVYDDQQQIVQIHQRKLDALEDLVEAANGKPVLVAYWFKHDLIQIKSRFKVREIKTPRDIQDWNAGKIPLALIHPASAGHGLNLQAGGATLIWYGLTWSLELYQQTNARLWRQGQRQPVVIHHIITEGTIDENILAALKRKDKTQLALINAVKANLKGSVVA
27624..28091                       restriction endonuclease; B1A73_01965                                                N/A                 LactobacillusreuteriMSIMWNYLDKRRATVAALKDYDGMKFIIDSYQDELKLAKEQMVGVSSPRYGFSPSGSKKDNPTEHRLLHGIDQTTKLNERYQQAQLYFKWFEPAWQELSDDERFVLDVCYRTPNQSMNEGLTIMMDKYFIAKTTAYNRKNKSLDHLTLLLYGSHH
28239..28616                       PHAGE_Burkho_phiE125_NC_003309: putative class I holin; B1A73_01970; phage(gi17975232)     6.87e-19            LactobacillusreuteriMPYSPKKPCRYPGCPRLTHNTYCDAHAKQVSSHYNRYQRPKRSRPRYHRGWPKIRQRYLLHHPFCEMCLSQGRYTKATEVHHVLPLEHGGTNEFKNLMALCKPCHSRITAQMDDRWHKAPRQYHY
28639..28651                       attL                                                                                 N/A                 CCTTAAAAATTTT
28736..29278                       terminase; B1A73_01975                                                               N/A                 LactobacillusreuteriMAKDGTNRGGFRVGAGRKSKSLHDKLEAGQKATVIDLPEPANLEGHVMPPVKKYLKAKQKNGLEFDAADIFKETWEWLVERGCEKLVNTQLIEQYAVSVSRWIQCEECISKFGFLARHPTTGNAIASPYVSMSRDYMKQSSQLWFQIFQVVKENNATTYQGSTPQDDVMERLLRSRKGMN
29278..30504                       PHAGE_Strept_EJ_1_NC_005294: transferase; B1A73_01980; phage(gi39653711)             1.14e-77            LactobacillusreuteriMKFVKKKITDLIPADYNPRKDLKPGDPDYEKLKHSMKEFGYVDPIIWNQQTGRVVGGHQRLKILQDEGIKEAECVVVNLNEDKEKALNVALNKISGDWDKDKLALLMTDLQASDLDVSLTGFDENEISDLLSTADDTHDDDFDVDSELDKPTFSKPGDLWHLGKHTLLCGDATKTESYQKLLGDHKVNLVLTDPPYNVDYSSKAGKIKNDHQADDKFYQFLLAAFQNMNQAMANDASIYVFHADTEGLNFRRAFQDAGFYLSGCCIWKKQSLVLGRSPYQWQHEPVLYGWKKDGKHEWYTGRKESTIWEFDRPKQSKEHPTMKPIPLLAYPIMNSTMSNCTVLDPFGGSGSTLIACEQTNRICYMMELDPKYCDVIVQRYIEQVGSSKNVSVERNGKTILYSKVKKPA
30577..31197                       hypothetical protein; B1A73_01985                                                    N/A                 LactobacillusreuteriMEIKFNVHGQQRKELVTKLADYTHRKAEYQYTPTYAYQIGKYTVNKDGVLTSPDEIPANLLDYLEQQGFHPTEIIKLNLAYQRDKFTDQALDNLRHLIWAKGQLIKDACQLEALPLNVDEKQVSFDWFKEVKLDDALAYQQFVDKLVQYAISHQRIMSEPHEESNEKYAFRCFLLRLGFIGPKFKDQRKVLLRNLTGSAAFKNQGD
31200..31406                       DUF5049 domain-containing protein; B1A73_01990                                       N/A                 LactobacillusreuteriMNRIKDELAKRNRIRQQVLKIRNTGEANMFDVENVKRLAYYYNYHDLIDYLNTDRAGYVNLILTGKFN
31510..33071                       PHAGE_Gordon_Nymphadora_NC_031061: hypothetical protein; B1A73_01995; phage(gi100002)     3.49e-92            LactobacillusreuteriMAKDSTYNKDAADFAVSFIECLCHTKGTWAGKPFDLIDWQEKIIRDIFGILKPDGYRQFNTAYVEIPKKQGKSELAAAVALLLCCADGEERAEVYGCAADRQQAAIVFDVAADMVRMNPALKKRCKILASQKRLIYEPTNSFYQVLSADAYSKHGFNVSGVIFDELHTQPNRKLYDVMTKGSGDARTQPLYFLITTAGNDEHSICYQVHQKAIDIMKGRKHDPRFYPVIYGAGRDEDWSSPEVWKKANPSLGITVKMEKVKDAYNSAKENPAEENTFRQLRLNQWVKQDVRWMPMDKWDACAFPVDPDELRGRDCYGGLDLSSTTDITAFVLVFPPRDDSEGYTLLPYFWIPEDNVDLRVRRDHVPYDIWKQQGYLQTTEGNVVHYGFIEHFIDDLGKKYHIREIAFDRWGAVEMVQNLEGMGFTVVPFGQGFKDMTPPTKELMRLTLEKKIAHGGHPVLRWMMDNIYIRTDQLGILNLTKLSQLKKLMVWPPLWDWIVLSEMRIMVTLFMMVEVYCCAA
33166..34365                       PHAGE_Klebsi_phiKO2_NC_005857: putative portal protein; B1A73_02000; phage(gi46402090)     1.67e-85            LactobacillusreuteriMSFFFGSSMAGQNVTERTAMQNTVVYACVRVLAEGLAELPLHIYQYTNDGGKQRAINHPLYFLLHDAPNPEMTSFIFRETMMNHLLLWGNAYAQIIRNGQGEITGLYPLMPDRMDVNRAANGEIYYTYTRNYDDYQAKNKSKQVILLSDEVLHIAGLGFDGLIGYSPIAMAKNAIGLSMAAEQYGATFFKNDATPGGVLEHPNVVKDPERLRKSWQSQFSGSNNHSIAVLEEGMTFHQLSIPPDQAQFLDTRKFQLDEIARIFRVPPHMVGDLDRSTFSNIEQQSLEFVKYTLNPWCIRWEQAMNQQLLSADDQRKYFVKFNVDGLLRGDYESRMNGYAIGRQNGWLSANDIRELEDLNRIPTNEGGDEYLVNGNMLPLNQAGNFYNSQPSKESEEPKE
34362..35033                       PHAGE_Geobac_E2_NC_009552: putative Clp peptidase; B1A73_02005; phage(gi148747731)     3.68e-45            LactobacillusreuteriMKRFWNWSGPQNQRVLTISGTIAEDSWVDDEVTPQVFQDELSQGKGPIDLWLNSPGGDCVAASRIYTMLMNYPDDVNVKIDGIAASAASVIAMAGTKVSMAPTAMIMIHNPLTIVGGQKEDLDQAAQMLAETKESIINAYELKTNLPREKISAMMDDETWMNVNKAIELGFADAMLGDNKNVTDCYSYSDKQSDLVLLNKLKPKAKSTISVKSLQKRLSLLSH
35052..36230                       PHAGE_Azospi_Cd_NC_010355: Phage major capsid protein; B1A73_02010; phage(gi168495136)     3.90e-42            LactobacillusreuteriMNKITELQEKRARIWKQAKYFLDTKQKEADVLSAEDNATYEKMEQDVVNLGKEIDRLHKQAQIEAELNQPTTKALTNTPTAGELPKGQDAYAQNFWQMMRGHAVVDALKEGTDPDGGFLVPNEFENQLIQKLQEANVLRTISHVIQTNSGEHKIPVVASEGTAAWLEEEAAYTESNTQFSQVSLSAHKLGTLIKVSEELLNDSAFDLMSYLSDEFGRRLGNAEEQAFLTGTGTGQPTGILTDTNGASAGSTAAKADTLTFDDLIELFYSLRAPYRQNAVFLMNDDTVKTIRKMKDNNGQYIWQPSVQAGQPDRILNCPVYTSPFMPSMAASNKPVLFGDFNYYWIADRQGRTFKRLNELYAVTGQVGFLGSQRVDGKVILPEAIKTLAMAAK
36247..36525                       hypothetical protein; B1A73_02015                                                    N/A                 LactobacillusreuteriMAAITLAEAKAYLRVDNTVEDDLITKLIGSATATVENVLRQPLSAFDSLPDDIHTAILYTVAYLYEYRETADFDAMIKFLRAILSPYRKEEF
36525..36908                       PHAGE_Clostr_phiCT19406C_NC_029006: head-tail adaptor protein; B1A73_02020; phage(gi971821549)     1.15e-13            LactobacillusreuteriMQQQNKRVSKIADIGELDRRITLMKKKYVGENPNTGMSMYKDVRLGDVWAKVSALHGQEYYTAVTVKLEKQLSFIIRYRDDVDEETNIWFEGRGYNIGFIDDVKYNHEYLEIKAEYSRGVDDPNEDN
36895..37308                       PHAGE_Bacill_WBeta_NC_007734: phage holin; B1A73_02025; phage(gi85701395)            4.90e-31            LactobacillusreuteriMKTTSLTVINSCFGAIGAFLGWFLGGLDGFLYVLLIFMVVDYITGVLCAINEHKLSSEIGFRGLTRKVLILLLVGIAHCLDIYLLKNGSAIRTATIFFYISNEGISLLENTSRLGLPVPDKLKSVLQQLHDKDGDHQ
37305..38183                       PHAGE_Strept_DrGrey_NC_042016: DNA topoisomerase medium subunit; B1A73_02030; phage(gi100004)     1.01e-20            LactobacillusreuteriMISGIDVSEWQGHVDFNAVKASGVKFVLIRAGYGRSASQEDRYFAEHYTQAKAAGLQVGAYWYSYAVSPADAANEARACLTVLGNRHFDFPIYFDLEEKWQFANGRNFCDSLVKSFCSVLEQNGCYAGLYISRSPLQNYISPSVAQRYAVWVAEYGPCCNYNGNYGIWQHSSTGSVPGVNGNCDLDYAYIDYAAVINKKQPVTRKNPDELAVEVLNGQWGNGTDRQQLLTAAGYDYAVVQEKVNRLLNRKSVDQITREVIRGSWGNGNERINRLKQAGYDPTQIQKRVNQLL
38450..38683                       hypothetical protein; B1A73_02035                                                    N/A                 LactobacillusreuteriMIKKVQAVTHQPLQSIKNNISSEQLLNDLHYQQSKQIIQVLLNKGLISTTEFKEIDDLNKQSFPPLLGPGSVDTSRF
38719..40380                       PHAGE_Bacill_Gamma_NC_007458: site-specific recombinase; B1A73_02040; phage(gi77020163)     1.62e-34            LactobacillusreuteriMSTITKIQGYQHDVKQLRVAAYCRVSTDNFEQLESLENQRAHYQKYINNHPNWELAKIYYDEGISGTKMTKRNALKELLTDCHNHRIDLVVTKSISRLSRNTTDCLQIVRELQQLNIPIIFEKEHINTGAMASELFLSILSSIAQDESHSTAGNLRWAIRKRFASGKFHVSSAPYGYSIEDGNLVINHTEAKTVRQIFQRFLSGTSASQIAKELNQKQVSTKRGGQWRSNTVINILRNSNYTGDMLCQKTYRDDQYHRHFNQGELAQYLIEDHHPSLINHENFNRVQVLLKEAVKKRHIETGSHKYQQHYLFSGKIICGQCGTIFKRQTRPHKIYWACQQHLRSAQQCPTKAVSEASLKAAFCNMINKLVYSKKFLLQPLSEGLKEEANVNSDGQLISLTKQIKANDHKAETLTELMHAGLLDKAIYVNQTARLEQDTYQCQEKIKQLNGQNTDSANDFEDVRTLLRWCHQGKQLTEFDEGVFQEFVQQIVVNSSNKATFILKCGLKLPEKLNKNATIDGHFYRDIIKQRYNDPIKQTEYLYSIIESEGDLIG
40373..41950                       PHAGE_Lactob_phiPYB5_NC_027982: putative integrase; B1A73_02045; phage(gi937456185)     8.92e-28            LactobacillusreuteriMGKVRIIPAHQQKGNSVQPQQSRQPFEQLRVAAYCRVSTDYDEQASSYETQVVHYKELIQKEPTWEFAGIYADDGISGTNTKKREQFNQMIAACKAGKIDLIVTKSISRFARNTIDCLKYIRDLKAINVAIFFEKENINTMDAKGEVLITIMASLAQQESESLSQNVKMGIQYRYQQGKIFVNHNHFLGYTKDAQGNLVIEPAEAKIIKRIFYSYLNGMSMKQIADSLKADGILTGGKTKNWQSSGVSRILKNEKYMGDALLQKTYTVDFLNKKRVKNNGIMPQYYVENDHPAIIPKPVFMQVQQLIKQRQNGITTKNGKHRRLNGKYCFSQRVFCGKCGDIFQRNMWYWPEKVAVWRCASRIKRSKSGRRCMIRNVKEPLLKEATVQAFNQLIEGHKLADKQIKANIMKVIKNSKGPTLDQLDKQLEEVQIQLIQAANQHQNCDALTQQIMDLRKQKEKVQSRETDKQTKLHSIDEINKLVEFHKYGLVDFDEQLVRRLVEKITIFKRYMEFTFKDGEVIKVNK
43303..43315                       attR                                                                                 N/A                 CCTTAAAAATTTT
