gi|00000000|ref|MZ090005.1|  Listeria monocytogenes strain 09/09/S plasmid pLIS25, complete 77818, gc%: 37.47%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
4419..4431                         attL                                                                                 N/A                 TATTTTTATATAT
8064..8077                         attL                                                                                 N/A                 TCTGTTGCAAAGTT
13508..14944                       PROPHAGE_Deinoc_R1: transposase, putative; pLIS25_00066; phage(gi15807743)           2.59e-22            ListeriamonocytogenesMSNKKILANYSEEQRLKALKKFRVLQPYLKKEIPLSKVSEENDISTRTLRKWISNYKKSGLVGLITKERSDKNSMKISEDLCKIIKHIYLENKNVSITSIYRRTVSWCKENNIQEPSYYQVRKIIQLVPDKLKVLAHQGSKIYMNHYELVHIRETTAPNIIWQADHTLLDIEVLNAKGYPERPWLTIIMDDYSRAITGYFIAFESPNSLRTALTLRQAIWRKDQADWPICGIPRIFYTDHGSDFTSQHLEQVSADLKIELKFSKVGVPRGRGKIERFFHTVNSMLLQDLPGYIKNRKAKSMLTLEEFSDIFRNWLLRIYHQKQHSTTKEKPIAMWNNYDFLPNMPNSLEDLDLLLIKVKKERVVHSDGIHLFGMKYVHPTLSAFVSEPVVIRYDPRDISDVRVFYKNVFLCTAVSTSFEQYAIGIREIEKERSKLKRELKRELIVSTNKVIEKLVGRQKENSSTVKNNVSSLRRYENE
14937..15366                       AAA family ATPase; pLIS25_00071                                                      N/A                 ListeriamonocytogenesMNELNFIETKEYKKFAEFCRACMKYKYIGICYGNPGVGKTISAKHYANWHRLETILTRKGNRLNPELVIDKLKGIKTNTLFVTAPATKPSSLSSQLSSLAIDIAHVNEIISSTENKVIPKTDRIDYMATSIDRIVENIFYAVDT
15370..15384                       attL                                                                                 N/A                 TCTGTTGCAAAGTTT
15440..16120                       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; pLIS25_00076; phage(gi985761246)     2.74e-89            ListeriamonocytogenesMNHFKGKQFKKDVIIVAVGYYLRYNLSYREVQELLYDRGINVCHTTIYRWVQEYSKVLYYLWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLHKQFGEPKAIVTDKAPSLGSAFRKLQSVGLYTKTEHRTVKYLNNLIEQDHRPIKRRNKFYQSLRTASSTIKGMETIRGIYKKNRRNGTLFGFSVSTEIKVLMGITA
complement(16240..18123)           heavy-metal translocating P-type ATPase; pLIS25_00081c                               N/A                 ListeriamonocytogenesMISYLIKSRQGQFLAIGILFAAAGFIFGTMNSEYSRWLFYAAIFFLGFYASKNAIVETVRYKSPNVDLLMILAALGAVIFDFESEGAALLLIFAAAEVLEDYANNKSTSAISELMAQVPETAQVLKENGEVVTVPTEDLNVGERVVVSKGEQIPIDGIIDRKSIVNESALTGESVPVVKEAEDEVFAGTINEGDVFYIDVTKSSDETVFSNIIRMVEEAQSRPSRISKFIDRIESKYVISVLVIVPIFIVVMYALMDLPFEEAFYRGMVFLTVASPCALVASATPATLSAISNGAKNGILFKGGAAMEALSTMDILYTDKTGTLTYGEFKVDEYSAPDDVLKEVIYMEQQSSHPIARAIVTAFKETDLSSVDHNEPVSEIAGSGIKKGTVRVGKPSAFSTFKNYDRFKQYFQKGNTIILAAKEEEVVGYFSLSDQIRRQSADAVANFQKEGIKVTLLTGDNEEVTETVAEVVGVDDYKASMLPEDKIAYVRESQDKEEVVGMIGDGINDAPALANADIGIAMGSGSSVAMESSDVVVVKNDLSKLFYSYKLSKKLNKIILQNVIFSISVIVTLIVLNLFGVLGLPLAVLFHEGSTILVILNGLRLLGSKGPKQEERVSDPSLKSVKV
complement(18586..19380)           ISLre2 family transposase; pLIS25_00086c                                             N/A                 ListeriamonocytogenesVIHRIVIHEGVNREKKRHTLINPMVFSSVESSQDAFKQAAHYLNQVYNLKDTIVVTNSDGGSGYEADKFESMDGYSKQHEHFRDLFHVHKKIKERLSFDKPMAKQVEKAIYQYDWDRIETLCATIESRLIDLPEVIIEDRLEQIRKLKNYLSRNWVYIKPFKKRELSIDRGTGAGETGHRLYTYRMKRQGRSWTKKGASHVVAILTAEKNGLLQTALTAEITDKVESLGEEIKGAVRQALKKIDSTAKQSKRVLSSIMVRKAAL
complement(19541..19861)           hypothetical protein; pLIS25_00091c                                                  N/A                 ListeriamonocytogenesMEFFGKKDISGKMISFFSSVMTNNKNIRLGIISGIKKLYDADLIPYHREQFRTSIMYFNLMGGVRILEILSFEEVEEITIELLKEKIVSLTKISKFFKKHNKYPLK
complement(19861..20100)           hypothetical protein; pLIS25_00096c                                                  N/A                 ListeriamonocytogenesMNTVEASQETIWFTLINTVHQDFLFYRLISEIEIKKIKSIKSGTLFTQGEPRSLIVHILSRLWWLDIIQRMIVAKILMS
20221..21090                       glycine/betaine ABC transporter; pLIS25_00101                                        N/A                 ListeriamonocytogenesMFKKMSLLVATVIGLLFTFGSEDSYKTTVGADSGGQTVTLATVNWESEIASTNVLAQVLKEAGFNVQITTVDPAIMFSSVAEGQLDAMVGGWVPTTHQAYAEKYGDSMVDLGANLEGAISALTVPTYMEDINSITDLTDENDSTITAIEPGAGVTNSAQNAVKEYDNLSDWEVSVSSTGAMIAELDQAINNEEDIVVVGWKPHWMFMDYDLKMLDDPENVFGGYEEIHSYAREGLKEDNPEAYKIIDNFYWEVEDMSSVMEELATDVEPEEAADNWIEANRETVDGWLE
complement(21336..22700)           oxidoreductase; pLIS25_00106c                                                        N/A                 ListeriamonocytogenesMKYVIVGTSHAGFEAVQTLLKKDSDAEIVVFEAGSTASFLSCGIQSYLEDISKSLDELHYANEASYKEQGVDIRMNTSVIAINPETKEITTRTTDGVEATESYDKLLLSPGGVPGTIPNVDDQHENIFYLRGRNWADKVKNRMSSAKKAVVVGAGYIGIEAAIAYAQAGIDVTVVDFVDSILPTYLDSEFTSLLTKHMEEKGMKIKTGEGVKEFKVNENNEVTAVVTDKGTYEADTVIISVGVRPNTQWLKDTLTLDGRGFVEVNEHMETSVKDVYAAGDATAIPFAPTNDKAYIALATNARRQGVIMARHASGDADAKIGRVNGTSGLAVFDYKFATTGIKDANANSYQGNVKSVYKEDLIRPSFMHDEEKVLMKLHYDADNGRILGAQLMSTYDILQAINAVSVAIEAEWTVDQLAQADFFFQPEFSRPWNFLNVLAQEAQGQPYGADTMLF
22818..22831                       attL                                                                                 N/A                 GGTTCTGTTGCAAA
22892..23246                       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; pLIS25_00111; phage(gi985761246)     4.39e-52            ListeriamonocytogenesMNHFKGKQFQQDVIIVAVGYYLRYNLSYREVQEILYDRGINVSHTTIYRWVQEYGKLLYQIWKKKNRQSFYSWKMDETYIKIKGRWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKC
23247..23260                       attR                                                                                 N/A                 GGTTCTGTTGCAAA
23250..23263                       attR                                                                                 N/A                 TCTGTTGCAAAGTT
23250..23264                       attR                                                                                 N/A                 TCTGTTGCAAAGTTT
23324..24004                       PHAGE_Staphy_SPbeta_like_NC_029119: integrase core domain protein; pLIS25_00116; phage(gi985761246)     3.00e-91            ListeriamonocytogenesMNHFKGKQFQKDVIIVAVGYYLRYNLSYRDVQEILYNRGINVSHTTVYRWVQEYGKLLYNIWKRKNKQSIYSWKMDETYIKIKGKWHYLYRAIDADGLTLDIWLRKKRDTQAAYAFLKRLVKQFDEPRVLVTDKAPSIASAFKKLQAHGFYQRTEHRTVKYLNNLIEQDHRPIKRRNKFYRSLRTASTTIKGMEAIRGLYKKNRKEGTLFGFSVCTEMKILLGIPA
complement(24061..24183)           heavy metal-translocating P-type ATPase; pLIS25_00121c                               N/A                 ListeriamonocytogenesMANKEDHMNMKNMSAKNMGNNESNMSHMDHDDMKMDHDMTE
complement(24434..24865)           PHAGE_Clostr_phiMMP02_NC_019421: regulatory protein; pLIS25_00126c; phage(gi414090405)     8.01e-07            ListeriamonocytogenesMKDAKNVTITDSEWMVMRAIWTMGHATSRELIDAMNELEGWSASTTKTLLHRLIQKQAVAQHGGSRPFTYKPVVGEKESMAAAADDLFDHMCAMRAGSTIAGVIQSRELSRADIANLQAILAEKAKTAPEEVQCNCLPGDQTC
25240..25446                       hypothetical protein; pLIS25_00131                                                   N/A                 ListeriamonocytogenesMIFMTYSMPSFITYEDTPKNKTPSETNDVLVVYTIDKDELVLIGIRVGSHDRLFPGQNRSKRYRKNNE
complement(25560..28682)           PHAGE_Entero_P1_NC_005856: Res; pLIS25_00136c; phage(gi46401632)                     1.60e-57            ListeriamonocytogenesMKLQYKNQQFQLDAVEAITSIFEGQPRQTNMSYMMDIGKEKNITLDIVNGFKNAAISLSDSDLLKNIQATQKKNGILTDNKLVKMSIGGKDKNTKIDNSKDCLTLTVEMETGTGKTYTYIKTMLELNKQYGWSKFIIVVPSIAIREGIAKTFESTSEHFKQAYGIGIRHFIYNSSPSQLAKIEAFASDAGINVIIVNTQAFNARGADARRIDMILDQFRGRRPIDVIAATNPIMIIDEPQSVLGNGSKAELNATRVGLAKFNPLFFINYSATHRDNYNMVYRLDAVDAYQKNLVKKIAVKGIEISGSNASSGYLYLEAIKEKPALKARIQFEKLSATGNVVKTSKLLDKGDNIYPLSGEIESYNSGFVVSEINAVDQFVEFTNGQKLSVGEVVGNTNDEDLRRIQIRETIHSHLAKEESLFKREIKTLSLFFIDEVVKYKDYGVIDDKGTYARIFEEEYENIVRDRLTDTLLDEKYRTYLERELESPEKVHAGYFSIDKKGKSVDSKIKRGSESSDDISAYDLIMKNKERLLSFEEPVRFIFSHSALKEGWDNPNVFQIATLRQSSSDIKKRQEIGRGLRLAVNQKGDRQDEQSLGENEVQQVNVLTVIANESYETFARDLQSEIADAIKNRPKLIEPKLFEGRELVVEDSNGQVTAKMVVDNTQAAEIWACLKTGKLIEKNKQTSVTYQKLSVTEKLEAIQEVLDEELQVFALPIQKLINSVYNLKDLPIENENKRTTLKLNREKYASKEFKNLWSKINRKSYYTVDFDDQEIIEKSIQLINKNLTVKTLKARITEGNMQATDTGTIFTVDGKRTTDIYSPVNTVKYDLIGEVSQNVGLLRKTVAYILSGIHPEQFAKYQSNPENFIVQISNLINAVKAQNIISHIVYNKLDEVWDEDAIFANSDIQGIMGQNVFDAKKHLYDKVRVDSEVEKRFASDLDVEQNVEMYVKLPGGFYINTPVGKYNPDWAVVLNEPDHKHVYFIAETKGVSENIELNLKGVENAKIEAARQHFKIISNSEVTYEVVDSYDKMMDKLSSHI
complement(28717..30615)           PHAGE_Campyl_PC14_NC_031909: hypothetical protein; pLIS25_00141c; phage(gi100154)     2.24e-25            ListeriamonocytogenesMSDRPEKINLSDVHSRQVDTDLLNELRDLFVKAEEQKERYDFTWNGKAKAYFEAAAPTTKTLRAQPEESVNFEGSENLFITGDNLEALKLLQESYLGKIDMIYIDPPYNTGKDFVYQDNFKKTKKENDLSEGILDEEGDRLVKNEKSNGRYHSDWLTMIYPRLKLARNLLSDSGIIFVSIDENEIANLELLLTEIFGENNLAGTIVWDKRNPKGDSKGVSMQHEYIVAAAKNINIFSEFKEFKRPKKNAEIILNKSKEIFKKINDKFTLSDANEEYRKWINSKKDLSGGEKAYSKLDEKGNVYREVSMAAPDKPEKRSHRPLTHPLTGKQTSVPAKGWRYIDKTMDKLLQQDLVIFGSDEKTIPNQKYLLVENMMEKLPSLYYNGASGSGDITKIGFKQNIFDNPKPVDLIRQLIVSTTKKNEVILDFFAGSGTTADAVMQTNSEDGGNRKFIVATLDEETPENSEARKVGYSTIDQISRERIRRAAEKIGDTSGFRTLKVDSTGLKEDVFKTAGELDQVDLLQDIDNHSDNRSDYDLLYDVLVDGALEYNRPITIDTMNDEQIIKYDYLGELSGVVCYFGENLTDELTRQIAILKPLLAVFKESTFDKSAQKVNVMEQFRIISPDTKVKVI
complement(30618..31175)           hypothetical protein; pLIS25_00146c                                                  N/A                 ListeriamonocytogenesMIIEIPKQAVVNRIVPKDRFNFDDATKIERIRWLGKLGPTTINLPAKKIQEIEIFSVDMIDFDLSVIKEIVSKIPQEILFIINDEILIMYYQGYCISKRVENHLQIKGLSIDEVRDNFIRQLLDLKDISKPLKQQVANIKIINELEFEIDRINTQIKRSIQTNKKQALARERYTIEQNLAKLRGE
complement(31176..34370)           PHAGE_Pseudo_PH1_NC_031908: hypothetical protein; pLIS25_00151c; phage(gi100006)     1.21e-06            ListeriamonocytogenesMKNFNNIDERVVDDLKKELKAQSKLKIAAASFSIYAYEELKKELEKVDQIQFLFTSDLFTKEKAPKEKREFFIPRLNRESQLYGNEFELRMRNELSQKAIAKEAAEWIRQKVTFKSNISGQRSDNFMVVENKGNINVYAPFDEFTTAEIGTTKGEKLFYNISKFENENTQQFLNAFEQVWHNQDYVDEVTNTVLDNITAAYQENAPEFIYYIALYNLFGEFLSDLDQDYIPDERTGFKDSKIWSLLYDFQKDAVLGSISKLEKYNGVILADSVGLGKTFSAIGVIKYYESRNKNVLVLVPKRLKDNWNNYKNNYKNNPLAEDRLRYDVLFHTDMDRERGESNGIDLGKINWGNYDLVVIDESHNFRNGEGTTHKKEEGVENRYQKLMRKIIKLGVKTKVLMLSATPVNTDFSDLRNQLMLASEGDSSNLTKTLTTKKTVTEIFGQAQRAFKDWSSLETENRTTEYLLDMLDFDFFELLDSVTISRSRKHIEKYYDQSDIGKFPKRFAPINESPKLTDLDITYNDLFQFIDLLNLEVYTPLKYVYPSKIEKYTEQATAGASSWANREKGRNQLMITNLLKRAESSIHAFKLTSERILENISLKLQVIEEYKQSKNGIVKSDSDDFEDDVFTVGQDLKIDIADMDYQSWEKQLVADKYVFTELLDVVNRIIPEHDTKMATLQEIILKKIENPINKGNKKVIIFTAFSDTADYLYKYLSNQLIQKDGVHTALISGTRTESTIPGRKNDFNELLTLFSPKSKNRDALGLDGEIDVVIATDVISEGQNLQDADYLINYDIHWNPVRIIQRFGRIDRIGSTNDNIQMVNFWPDISLDEYINLKARVENRAKLVAISSTGEDTIDNTDPDMEYRKKQLETLQNEVVDLEDMSSGVNIMDLGLNEFQLDLQKLREKYGDYEAKPYGIHAITKADSNHPAGVIFVLRNRNNAMNIDKQNRLHPFYLVYIAENGKIISNHFNPKKILDDMRYLSSEKSVPIENLVQSFNIETLEGKDMSKYSNLLNQAIDSMISVKEEKDIDSLFTTGGTTALENDINGLNDFELIDFLVVRGE
39900..39912                       attR                                                                                 N/A                 TATTTTTATATAT
