gi|15791399|ref|NC_002163.1|  Campylobacter jejuni subsp. jejuni NCTC 11168 chromosome, complete 1641481, gc%: 30.55%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(182068..182787)         PHAGE_Bacill_CP_51_NC_025423: putative resistance protein; Cj0186c; phage(gi725949539)     1.81e-13            CampylobacterjejunisubspjejuniNCTC11168MFEWIFSIDAWITLATLSALEIVLGIDNIIFLAILVSKLPPEHRDKGRILGLAFAMITRILLLLSLFWVMKLVTPLFSVLGNEISGRDLVLLLGGLFLIVKSIKEIKEQISHQEESQSHFKASNKLWIVVAEIAVIDIVFSLDSVITAVGIAQDVTIMIIAVIIAVAVMLFASKPIADFVEKYPSIKILALAFLVLIGVVLVAESFDIHIDKAYIYTAMAFALVVQILNILDQKKEKNG
complement(182859..183425)         PHAGE_Prochl_P_SSM7_NC_015290: PRGA-formyltransferase; Cj0187c; phage(gi326784531)     2.29e-34            CampylobacterjejunisubspjejuniNCTC11168MLVKLAVLFSGNGSNLENILEKLHKKTIGENTYEIVLCLCNKKDAFGIQRAKKFGLNTVIIDHKAYNTREEFDTILVQKIKESGANLTVLAGFMRILSPVFTKNIKAINLHPSLLPLFKGAHAIKESYESDMKVAGVSVHWVSEELDGGMIIAQKAFEKRNLSFEEFEEKIHSLEHEILPLSVIEIFS
complement(183416..184786)         putative kinase; Cj0188c                                                             N/A                 CampylobacterjejunisubspjejuniNCTC11168MKAIIDNIKILEQNAINKGLDELILMENAGLNLAKLIKKEAKKIRIQRKIRKVKILFLLGGGNNASDGLVALRNLKHAKAYKIGFKENTLFKKQEQILQNYAFKFCKKEPNFKKFHIIIDCILGTGSNRCLDEKTSLIIQKVNQSKALKIACDIPTNLGFYPCFKADITFCMGALKEILLEDFAKEFVGRIKIANLGIRSKKFYPNSQAFLLEKKDLKTIDRKINANKGNFGHIYIVANASAGTLAGLGALNFGAGLVSLVAQKSFSPLLMLKEKIENNASAIALGMGLENLDFLKDEILQNTPLILDANCFLSEALLWYLNRKDVVITPHPKEFIKLYKMCFDENLDIETLQKNRFFYARKFSQNYDCVLVLKGANPIIVQKEKLFVVNLGNQALAKGGSGDVLSGMIAAHLGFGFSALEAAKNATLAHGLVAKKYKFNKNSFDALKLIKGLKCL
complement(184770..185468)         hypothetical protein; Cj0189c                                                        N/A                 CampylobacterjejunisubspjejuniNCTC11168MENKSIAIFIDAENIPAKYAKSIFDIASDYGEVIIKRIYGDWTQKNIQGWREQIAEYSLIAMQQFNFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSDSDYTSLIQKLRENKKQVIGMGLEKSIKSYVNAFSEFFYLDKDESKKEDILSKDYLRALINITEQLIDEKGRAEYAQIRTNMNRKYSDFHPQNYGFKNFRALIQKFLPKMKKFEEEREKNIYFLVKKDYESYY
complement(185470..186975)         PROPHAGE_Escher_Sakai: putative ATP-dependent protease; Cj0190c; phage(gi15833954)     2.53e-87            CampylobacterjejunisubspjejuniNCTC11168MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASTAIKESVERIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDLAIALLILLQNEELDDFFVVGELGLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEFFKEKNYENFRFSHNHPLFANPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALGMHNILFEGSPGSGKSMCAKRLVYIMPPQSLSEILMQNAYMSLDSKDCEFTKIRAFRHPHHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIESLREPLEDHKIHISRVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLYVAMDEISKDDKTSISSKEMSEKILQAFIFSKKRGQKEFNGKLKDEDLSRFCVLEKDAKDTLDLAISRYNLSLRSLNKILKVSRSIADLEQSLNISKTHILEALSFRARN
complement(186972..187499)         PHAGE_Synech_ACG_2014f_NC_026927: prohead core and protease; Cj0191c; phage(gi100217)     6.37e-15            CampylobacterjejunisubspjejuniNCTC11168MVRKIITYPNPRLFLNSEIVNKFDTELHTLLDDMYETMIASNGVGLAAIQVDIPLRVLLVNIFDENDEQKKEDLLEIINPEIIPLDEEMITCTEGCLSVPDFFEEVKRYNHILLKYQDRFGEFKELEAKGFLAVAIQHENDHLNGHLFIEKISFAKRQKFDKEFKKKKKNHKKEK
complement(187535..188119)         PHAGE_Agroba_Atu_ph07_NC_042013: ATP-dependent Clp protease proteolytic subunit; Cj0192c; phage(gi100676)     3.03e-76            CampylobacterjejunisubspjejuniNCTC11168MFIPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEYGLIDKVLEKSFK
complement(188119..189453)         trigger factor; Cj0193c                                                              N/A                 CampylobacterjejunisubspjejuniNCTC11168MEVKAKQLDSVNATASVKIPSGMIKSEVENLAKKASKSVKMDGFRPGKVPVSAVLKRYERELTQDAEQNLFKSAVNSALQELKKENKELVGEPYFEKFDRKDGEIIAELILSFKPEIKLEGYEKLIPEYQTPKVSKKEIDEKKDELLKRFATPEAIKTKRALKEGDFAKFDFEGFVDDKAFEGGKAENYVLEIGSKQFIPGFEDGMVGMKIGEEKDIKVTFPKEYGAAHLAGKDAVFKVKLHEIQELKIPELDDEMLKKLLPGEEKASVEVLDEKLKEQIKNEKLFKLVNDELKGKFADALIEKYNFDLPKGIVEQETDMQMRAAFNTFSEKEIEELKASKEKYQEKRDSFKEEAQKSVKLTFIIDELAKLRKIEVNDQELIQAIYFEAYRYGMNPKEHLENYKKQGALPAVKMALIEEKLFNDIFIPKTEKSEKVSKKEKEDK
189596..190168                     PHAGE_Pseudo_PaMx25_NC_041953: hypothetical protein; Cj0194; phage(gi100037)         4.07e-62            CampylobacterjejunisubspjejuniNCTC11168MQKKFEDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQNVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQALMENVDAKGVGVVIEARHMCVEMRGVQKANSTTTTSALRGIFLKNEKTREEFFSLINSAKQVRF

#### region 2 ####
complement(1064895..1065881)       PHAGE_Stenot_vB_SmaS_DLP_5_NC_042082: hypothetical protein; Cj1131c; phage(gi100085)     8.40e-43            CampylobacterjejunisubspjejuniNCTC11168MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKTRAFKFFEQDLSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNKFIFSSTAATYGEPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCILRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIHVDDISSAHLAALDYLKENESNVFNVGYGHGFSVKEVIEAMKKVSGVDFKVELAPRRAGDPSVLISDASKIRNLTSWQPKYDDLELICKSAFDWEKQC
complement(1065939..1066733)       PHAGE_Brucel_Pr_NC_019447: putative DNA-PolB associated Exonuclease; Cj1132c; phage(gi418487886)     3.90e-08            CampylobacterjejunisubspjejuniNCTC11168MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQKEQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKIDGQNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNGRGIKLDTLCSMVGLPGKYDVHGDEVMKLFYENKLEKIHEYCESDVLNTYMLFLKYELIKANVDEEDYVGFLSYMRDFLCAKKSDRSYTEVFAKACESEISKVRS
1066799..1067827                   heptosyltransferase I; Cj1133                                                        N/A                 CampylobacterjejunisubspjejuniNCTC11168MKIAIVRLSALGDIIQSAVVLQFIKNFKKDIEIHWFVDEKFEGILKNHPLINKLYALPLKDKKILKSLKILLKARKNNYNAVIDLQGLIKSAIVSRILSRNNFGFDKNSLKESFAHNFYNQKLELDYNENVFVRYLSLTSFMLNTDFNVKNLAFKQDIFSVDENLKQLLNNKLKLDKNEKNILIHVGSSVENKIYPKTKLAILCKLLINEFQQTKIWLAWGNVKEYEFAKEVLNLSGIDETHIELAPKFNLEELMAFTKMMNLIIGNDSGPTHLAFALNKASITIFGATPSYRNAFQTHINKIIDAGKKIQNAKHIDKSDFCITRIEEEDIFKLAKGLLNEK
1067817..1068704                   lipid A biosynthesis lauroyl acyltransferase; Cj1134                                 N/A                 CampylobacterjejunisubspjejuniNCTC11168MKNSDRIYLSLYYILKFFVTFMPECILHFLALIVARIAFYLNKKHRKIINTNLQICFPQYTQKERDKLSLKIYENFAQFGIDCLQNQNTTKEKILNKVNFINENFLIDALALNRPIIFTTAHYGNWEILSLAYAAKYGAISIVGKKLKSEIMYEILSQSRTQFDIELIDKKGGIRQMLSALKKGRTLGILTDQDCVENESVRLKFFNKEVNYQMGASLIAQRSNALIIPVYAYKEDGKFCIEFFKVKDSQNASLEELTLYQAQSCEEMIKKRPWEYFFFHRRFASYNKEIYKDAK
1068701..1070248                   PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; Cj1135; phage(gi9630147)        5.27e-07            CampylobacterjejunisubspjejuniNCTC11168MNLKQISAIIIVKNAKQTLLECLNSLKDFDEIILLNNESSDNTLNIANEFKKDFANLHIYHSAFIGFGALKNLALSYAKNDWILSIDADEVLENECIKELKNLELQEDNIIALSRKNLYKGEWIKACGWWPDYVWRIFNKNFTRFNDNLVHESLVLPSNAKKIYLKNGLRHYAFRDISHLIDKMQYYSSLWAKQNIHKKSGVLKANLRAFWTFFRNYFLKNGFLYGYKGFIISVCNALGTFFKYMKLYELQKQKPKTCALIITTYNQKERLKLVLDSVKNLAFLPNEVLIADDGSKEDTARLIEEYQKDFPCPLKHIWQEDEGFRAAKSRNNAIKASKSEYIILIDGDMILEKDFVKNHLEFAKRKVILQGSRVILNKNESEEILKNNNYSLAFNKKGFKNQRSIFLAKCVYKFSKLTKKFFKKSQLVKGSKTCNMSFYKSDFEAIEGFNEKFIGWGREDSEFVARFLFNDGVFKRLKFNALAYHIYHEENSKNMLEINHQIYLETIKNEKTTWR
1070252..1071424                   PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; Cj1136; phage(gi30043988)     2.41e-06            CampylobacterjejunisubspjejuniNCTC11168MKKVGVVIPIYNVEKYLKECLDSVINQTYTNLEIILVNDGSTDENSLNIAKEYTLKDKRIILFDKKNGGLSSARNVGIEYFSGEYETQYIEKENELNVFKIIGDNPQNIYKIYKYKNALASDKLEISKIDYIIFLDSDNYWELNCIEECVVRMQNVDVLWFDHACIYDDGIEDKGQKTRMNVFNFTQECTITPRDYAKQAIKVGSRDISFSWGGMIDFSFLKQLKLKFINKIINEDIHFGMVLFASADSIYILPKRLYLCRLRANSISNHDKKVTKANVSEYFKDLYEFFGENAKEAKNYLKAASRMITALELIEFFKDQKNENSQAIKEAFLPFYVKKALMIKKFKKDPLNLKEKLPIIKPFIQTKIPYDLWKIWQKIKGILDKINFAK
complement(1071408..1072403)       PHAGE_Synech_ACG_2014f_NC_026927: hypothetical protein; Cj1137c; phage(gi100232)     5.78e-13            CampylobacterjejunisubspjejuniNCTC11168MQIQQNNSLIYNTLTKKLSSFIPIKSTRRKLRNHIQYKLEHPKVTNYLSNNYINPFLEGKIPHFDFEKKHYFKNDKIIWQFWYQGKNQASPMIQQCFNSVQSQMKDDYTIIILDKDNIKDYLDFPPFVIEKLENNFFGEKTITFFSDLLRVCLLATYGGIWCDASIFLSSKIPSELCDKDFFTFERSKIKPSKEKLKKFIKSGYFSYGYFNWNDDFKVKMLSSFMIAKTNNTFIQTLKDILMNYWKNEQSSENHYYFILHIIFELLKEHGFVNDIYKNMSDIECHLLQFSAKEKFNSTLWEEIQKQSFLHKLTHFKSIKKDSMIDKIILQS
1072461..1073630                   PHAGE_Staphy_phiN315_NC_004740: probable ss-1,3-N-acetylglucosaminyltransferase; Cj1138; phage(gi30043988)     9.71e-06            CampylobacterjejunisubspjejuniNCTC11168MKTVGVVIPIYNVEKYLKECLDSVINQTYTNLEIILVNDGSTDENSLNIAKEYTLKDKRIILFDKKNGGLSSARNVGIEYFSGEYKLKNKTQTIKENSLIEFNIEGNNPYEIYTVYKSYKAFNNEQDLTNFTYPIIDYIIFLDSDDYWELNCIEECVPRMDGVDVVWFDSIEYHDIEKSYFKHHSRLKDINIKKECRINPIEWLKLLRQNKIKDFAFAWSGIIDFDYIKDKKMKFKDAIFAEDHLFGILLFSQAKNIYVYPKVFYYYRIRANSLTNQDKKITKDNILPYFKDIFIAFEENATLAKEYFKYVSWVETSLELVRFVENYHDKKISSLLKDTILYFYIKNAFKIKKFDKDPLCIKEKLQLLKPYKISKIRYKVMKFLISLRN

#### region 3 ####
complement(1358036..1358701)       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; Cj1423c; phage(gi100148)         8.39e-09            CampylobacterjejunisubspjejuniNCTC11168MQAIILCGGLGTRLKSIIKDIPKPMAPINDKPFLEFIFEYLKKQGIKEVILAVSYKYEVIKEYFKDEFLGIKIKYSIEKEPLGTGGAIKETLKFVKNEAYVLNGDTFFDIDLSKLKLNESKICLALKQMNDFDRYGTVNVDEQDLVISFEEKVFKKQGLINGGIYLLTKDIFNDFALQEKFSFEEFLQENYKKLKARACIFDDYFIDIGVPEDYYHFLINN
complement(1358689..1359294)       PHAGE_Caulob_Cr30_NC_025422: phosphoheptose isomerase; Cj1424c; phage(gi725949171)     1.44e-20            CampylobacterjejunisubspjejuniNCTC11168MENLNSYIKGHFADSILVKEQILKDENLITLIKNASLEVIKAYKNGNKTLLAGNGGSAADAQHIAGEFVSRFYFDRPGIASIALTTDTSILTAIGNDYGYENLFARQVQAQGVKGDVFIGISTSGNSKNILKALEFCKQKEIISIGLSGASGGAMNELCDYCIKVPSTCTPRIQEAHILIGHIICAIVEEELFGKGFSCKQ
complement(1359282..1360301)       PHAGE_Caulob_Cr30_NC_025422: D,D-heptose 7-phosphate kinase; Cj1425c; phage(gi725949173)     2.03e-21            CampylobacterjejunisubspjejuniNCTC11168MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIKREDGKIIFDSPDTNSYCEYESKEFLGNDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFAEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQDQYAATFGGFNFMEFYNNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKMKEALFRADFGTLAQILGKSWRSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALRKEQGYVQDFSFTKEGVKSWRI
complement(1360321..1361172)       putative methyltransferase family protein; Cj1426c                                   N/A                 CampylobacterjejunisubspjejuniNCTC11168MKKEQLEVLKEALNGLIYQIDNHQQARKPIADVERIISELQVLNHWNKQENVYNALHLIQGAIADPQGLGRLNLLLDNARIPKQYYDIFYKMLYVDKYGGGDGYRPVCIDCGGHAGLITDIILHCGGQSYIFEPNIYLNYFLRKKYENNINVKLFQKAVSDRNYETDFIMFGNRILSQGNRIVESVQDSQTEKTYKVQVIDLCEFIENEILTQHKRIYFLKLDIEGMEFEIMKKIIEKKIYKKIDYIACETHEYMFDDSEKKIGELKQLINKCNIQNILLDWI
complement(1361191..1362132)       PHAGE_Synech_ACG_2014f_NC_026927: hypothetical protein; Cj1427c; phage(gi100233)     2.88e-13            CampylobacterjejunisubspjejuniNCTC11168MSKKVLITGGAGYIGSVLTPILLEKGYEVCVIDNLMFDQISLLSCFHNKNFTFINGDAMDENLIRQEVAKADIIIPLAALVGAPLCKRNPKLAKMINYEAVKMISDFASPSQIFIYPNTNSGYGIGEKDAMCTEESPLRPISEYGIDKVHAEQYLLDKGNCVTFRLATVFGISPRMRLDLLVNDFTYRAYRDKFIVLFEEHFRRNYIHVRDVVKGFIHGIENYDKMKGQAYNMGLSSANLTKRQLAETIKKYIPDFYIHSANIGEDPDKRDYLVSNTKLEATGWKPDNTLEDGIKELLRAFKMMKVNRFANFN
complement(1362156..1363196)       PHAGE_Synech_ACG_2014f_NC_026927: hypothetical protein; Cj1428c; phage(gi100224)     2.55e-68            CampylobacterjejunisubspjejuniNCTC11168MQTNSKIYIAGHKGTAGTALVENLQKRGFNNLVLKTRQELDLVNQQAVAKFFKEEKPEYVFLTAVLPCGAANVAQRADFIYENLMIQNNVIHNSFLNNVKKLVFFGSGYMYPENAKNPLKEEYLFQGDLEYGAYSFGAAKIAGAIMCESYNIQYGTNFITLVLNNLYGTKANFDFGKSRVLPALLRKFHLAKLLSEGNITQILQDLKMNNFEEAKEYLHNFGISKKSVEIWGTGKVRREFIHSDDLADVAIYTMQNIDFKDLIKDRKSKNTHINIGTGIDYSIKEVALMVKNIVGFSGELVFNTSRPDSTMDRLMDCSKIHSLGWKHKIELKDGIKMMYEWYKTQN
complement(1363196..1364122)       hypothetical protein; Cj1429c                                                        N/A                 CampylobacterjejunisubspjejuniNCTC11168MEKLLKELNNNIKLSNQLSYQILMSNIISNLDIDKKDKEILLLLLQARDRNYIRINNNEQCYQNIINYLNLIRPLELPLCDLLRIGGNGDGGYVMYNGGGDMSDINAKALSLGVSDSSPWDLEMAQRGFKVIEYDASIEKCPYDHENIVFHKKFIGNVNNENTITLVQALKDNNLDENKPNILQCDIENCEWDMLENIDISILNKYFSQVIFEFHGCNPEEQDGVEKRISLLKKLNEYFVPMHTHFHNHGKIFYSQGLFFSTTLEVSYLRKNLINLDIMKYRDVAGGFKNLDFPWISNPEIPIRFRGY
complement(1364126..1364671)       PHAGE_Escher_phAPEC8_NC_020079: putative dTDP-4-dehydrorhamnose 3,5-epimerase; Cj1430c; phage(gi448260371)     4.86e-22            CampylobacterjejunisubspjejuniNCTC11168MAIEFDIQESKILKGVYIITPNKFRDLRGEIWTAFTDEYLSKLVPDGIKFKHDKFINSHFNVLRGIHGDVKTYKLVTCVYGEVHQVVVDCRKDSPTYLKWEKFIISYKNQQLILLPPNMGNSHYVSSKEAVYYYKLAYEGEYMDAPDQFTYAWNDERIGIDWPTNTPILSDRDILATKNKG
