gi|62184647|ref|NC_004552.2|  Chlamydophila abortus S26/3, complete genome. 1144377, gc%: 39.87%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(361724..363325)         PHAGE_Bacill_G_NC_023719: gp245; CAB311; phage(gi593777701)                          4.25e-09            ChlamydophilaabortusS263MLCAMSIVLDKIGKTLGTRVLFDDVSVVFNPGNRYGLTGPNGAGKSTLLKIITGSVEPTRGSISLPKKVGILRQNIDSFGDVSVLDCVIMGNARLWDALQKRDALYLEEFTDAIGIKLGEMEEIIGEENGYRAESEAEELLTGIGIPEALFNSKMSAMPIDLQFRVLLCQSLFGHPEALLLDEPTNHLDIHSINWLGNFLKDYDGTVIVVSHDRHFLNTITTHIADIDYDTVIIYPGNYDAMVEMKTASRDQEKADIKSKEKKIAQLKEFVAKFGAGSRASQVQSRLREIKKLQPQELKKSNIQRPYIRFPLSEKASGKIVFSLEGITKSYNDETPLFQPFSLEIYQGDKLGIIGNNGLGKTTLMKLLAGVESPTQGSIKTGHQVAYSYFPQNHSDVLKDCGDETLFEWLRNRKTGINDQEIRSVLGKMLFGGDDAFKQIKALSGGETARLLMAGMMLENHNTLILDEANNHLDLESVSALAWAINDYKGTAIFVSHDRTLIEECATKLLIFEKGKITFFDGTMADYTSSSKL
complement(363366..364304)         PHAGE_Bacill_Mgbh1_NC_041879: hypothetical protein; CAB312; phage(gi100037)          3.39e-30            ChlamydophilaabortusS263MVSAFYAFLDYLKNIKTASPHTLRNYCIDLNSFKTFLEKHGELTPSPPICLLTKERQEAELPFSLLTKDTVRLYILKLMQENKAKRTIKRRLSAIKSFSQYCVKQRILPDDPTETIQGPRLPKELPSPITYEQVEILMATPDLSKYTGLRDRCLLELFYSSGLRISEIVAINHWDIDFTSHLIRIRGKGKKERLVPITPHAAQWLQHYLTHPARTSIEKDAQAIFLNRFGKRLTTRSIDRKFQKYLRQSGLSGHITPHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYTHVSMKLKKQTHNESHPHS
complement(364349..365269)         ribonuclease Z; CAB313                                                               N/A                 ChlamydophilaabortusS263MSCRELVILGCSSQQPTRTRNQGAYLFRWNNEGLLFDPGEGTQRQFIFANIAPTIVSRIFISHFHGDHCLGLGSMLMRLNLDKVTHPIHCYYPASGKKYFDRLRYGTIYHETIRVIEHPIDKEGIVEDFGNFRIEARKLNHLVDTLGWRITEPDTIKFIPEKIKAAGLRGPIMQDLLRNEHVTVNGKTLYLKDLSYIRKGDSIAVIADTLPCPSIVDLAKNARIMLCESTYLEEHSHLAESHYHMTAKQAATQALAAGAQQLVLTHFSARYLNSKEFEIEAGKIFPNVTAAEEFRSYPFPKNPSSK
complement(365372..366043)         putative serine rich exported protein; CAB314                                        N/A                 ChlamydophilaabortusS263MTSSRLVPNAAISKNQTSHTITQNSEHNTAVLKRNKLITLICLLIMALLALIMVGGFLATPFFAAGMYIGMAALASLLISMVVFPLVISYLPQPSTHVRPRDLDLSKLDVRHNRLLHEIIKEDEKKYAQEQEVKQQRRQRRSLRSLPQRRPVEVSSSDEAPKPRRKTSSVLNLMRPRSSSSASSHSSSHDSDSSSGEHQTQQPMVVTRPVFPKKYENYMHCID
complement(366183..368639)         PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; CAB315; phage(gi100292)     9.28e-05            ChlamydophilaabortusS263MDSTINNDSQILDPNPEEVEKLLDESEEVEEKSDDRSLPADLFILPLNKRPFFPGMAAPILIESGPYYEVLKLLAKSSQKYIGLVLTKKEDADILKVGFNQLYSVGVAARILRIMPIEGGSAQILLSIEERIRIVEPLKDKYLKARVSYHKDNKELTEELKAYSISIVSVIKDLLKLNPLFKEELQIFLGHSDFTEPGKLADFSVALTTATREELQEVLETTNMHDRIDKALILLKKELDLSRLQSSINQKIEATITKSQKEFFLKEQLKTIKKELGLEKEDRAIDLEKFMNRLKKRQVPDYAMEVIQDEIEKLQTLETSSAEYTVCRNYLDWLTIIPWGIQSKEYHDLKKAEIILNKDHYGLEDIKQRILELISVGKLSKGLKGSIICLVGPPGVGKTSIGRSIAKVLHRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKMVQALKQSQAINPVIMIDEVDKIGASYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFILTANVLDTIPDPLLDRMEILRLSGYILEEKLQIATKYLVPRARKEMGLTAREIVFQPEALKHMINNYAREAGVRTLNGNIKKVLRKVALKIVKNQEKAHPKYTQYKINVNNLQDYLGKPIFSSDRFYDHTPVGVATGLAWTSLGGATLYIESVQVPSMKTDMHLTGQAGDVMKESSQIAWTYLHSALERYAPGYSFFSKSQVHIHIPEGATPKDGPSAGVTMVTSLLSLLLDTPILENLGMTGEITLTGRVLGVGGIREKLIAARRSRLNVLIFPEDNRRDYEELPAYLKKGLKIHFVAHYDDVFKVAFPHMN
369284..369925                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; CAB316; phage(gi16129761)     5.54e-05            ChlamydophilaabortusS263MYFHRYVIIDTSGYQPFLAYVDHQKVLKQWDLPVGPDQGLVLEFIFKNSSLSFQGIGVAVGPGNFSATRVGLSFAQGLALSRKVPMIGYSSLEGYLTPKDKGKALMLPLGKKGGVLTLSSDLSEDGFIHEKNGVGPGILLPYGEASKYCVANNCYHVISPNPELFIESFSNRIRIEKAAPSVDHIRRNVVSQLMILECSQQLTPDYRSCSCFF
370125..370301                     30S ribosomal protein S21; CAB317                                                    N/A                 ChlamydophilaabortusS263MPSVKVRVGEPVDRALRILKKKVDKEGILKAAKAHRFYDKPSVKKRAKSKAAAKYRSR
370331..371506                     PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; CAB318; phage(gi100293)     1.06e-15            ChlamydophilaabortusS263MDYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKDGPFAGAGGFGGAGMSNMEDALRTFMGAFGGELGGSGSFFEGLFGGLGEAFGMRGDPAGARQGASKKVHITLTFEEAARGVKKELLVSGYKTCETCSGSGASSKQGIKCCDRCKGSGQVVQSRGFFSMASTCPECGGEGRMITDPCSSCRGQGRIKDKRSVHVQIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEAHPVFERRGDDLILELPIGFVDAALGMKKEVPTLLKEGACRLTVPEGIQSGTILKIKNQGFPNVHGRGRGDLLVRVSVETPQNLSEEQKELLRKFAATEKAENFPKKRSFLDKIKGFFSDLTV
371541..373577                     PHAGE_Synech_S_SM2_NC_015279: transketolase central region-containing protein; CAB319; phage(gi326781943)     9.82e-11            ChlamydophilaabortusS263MVAIQHELGSSIKEVLKLVWSLRFAENKMLLLSRQSDSGGTFQLSCAGHELVGVVAGKSLLRGKDWSFPYYRDQGFPVGLGCDLSEIFASFLGRLAPNHSSGRMMPYHYSHKKLRICCQSSVVGSQFLQAAGRAWAVKHTKSNEVVYVSGGDGSTSQGEFHEMLNYVALHKLPLVTVVQNNAWAISVPFKDQCSTDLVRLGESYQGLSVYEVDGGDYFKLVDTFSKAVDQARHTSVPALILVDVMRLEPHSNSDNHEKYRSREDLDHCKSHDPLIRLERLMIDECGISPAEILDIKAEAEAEVTRACEIAEGMPFPSKGSTSHDVFSPHTTSLIDYENSLEAQRLRDTQPKVMRDAITEALIEEMSRDSGVVVFGEDVAGDKGGVFGVTRNLTDRFGSERCFNTPLAEATIIGTAIGMAMDGIHKPVAEIQFADYIWPGINQLFSEASSIYYRSAGEWEVPLVIRAPCGGYIQGGPYHSQSIEAFLAHCPGIKVAYPSNAADAKALLKAAIRDPNPVVFLEHKALYQRRIFSACPVFSSDYVLPFGKAAITQVGSDLTIVSWGMSLVMSMEVAKELAALDISAEVIDLRTIVPCDFSTVIESVKKTSKLLIAHEASEFCGFGAELAATVAEQAYAYLDAPIRRVAGLHAPVPYSKILENEVLPQKEKIFQAAKSLAEF
