gi|37678184|ref|NC_005139.1|  Vibrio vulnificus YJ016 chromosome I, complete sequence. 3354505, gc%: 46.41%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
530736..530750                     attL                                                                                 N/A                 AAAGCGGTTGATTTT
536292..537053                     PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; VV0552; phage(gi971760361)     2.27e-05            VibriovulnificusYJ016MILNSFNLQGKVAIVTGCDTGLGQGMALGLANAGCDIVGVNIVEPTETIALIEQTGRKFVDVRANLMKLDDIPAIVDRAVTEFGRIDILVNNAGIIRRNDAIDFSEQDWDDVMNINVKSVFFLSQAVAKQFIAQGEGGKIINIASMLSFQGGIRVPSYTTSKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTTALRADETRNKEILDRIPAGRWGEPSDLAGPCVFLASSASNYINGYTIAVDGGWLSR
537086..537643                     hypothetical protein; VV0553                                                         N/A                 VibriovulnificusYJ016MVDVFSQPLSIAQIVGLLSFALGLSTFYQKDDRRLKIVMLVFNFNHLIHYLLMGSMMSVLSSLLSALRTATAVCLSTGRCTIKGAERIAVTVFISAGAVFGLTLMDSVWELWPIVGTAIGTYALFMLKGIVMRLAFLVGASCWLINNILIGSIGGTLLELCVITINLVTIGRLLRDKKRLAVAGG
537766..538698                     sugar kinase; VV0554                                                                 N/A                 VibriovulnificusYJ016MNHIKRVAVIGECMVELRRNNGVLEQGFGGDTLNTAVYLSRLTHEHGVASSYVTGLGRDAFSQQMLSAWQVEALDTEHVFISEDKLPGIYVIETAADGERSFFYWRNDSAAKYWLRGQEIPQLAHALRHHQMIYLSGISLAILPSDCCDALLELLRLLRAQGATIAFDNNYRPALWPSQQQAQSVYRQVLALTDIAFLTFDDEQALYGDETEQQAVDRTQTLGVKEIVIKRGAEPCMVVTQVGIESIASQPVEKIVDTTAAGDSFSAGYLAKRLLGGSTGESALAGHTLAGAVIQQRGALIGTDAMPTII
538713..539336                     keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase; VV0555         N/A                 VibriovulnificusYJ016MKTLNQRLSDIKVVPVIAIEDAGKAAKLAQVLIENGLPCAEVTFRTEQAAQAIANMREAYPEMLIGAGTVLNSKQVDQAIEAGVDFIVSPGFNPTTVKYCQQRGVAIVPGVNNPSLVEQAMEMGLTTLKFFPAEPSGGTAMLKALSAVYPVKFMPTGGVNPSNVKDYLAISSVLACGGTWMVPSHLIDNEQWDELGELVVQVASIIK
complement(539463..539903)         PROPHAGE_Escher_EDL933: putative transposase; VV0556; phage(gi15803516)              8.52e-17            VibriovulnificusYJ016MAGAERQRMTEPENLERMVSILAFVAVRLIQLRECLTLAAQLRGRGLKEQAEAIESQPSTNVLTQDEWHILYLNVNKRGGRYPKKLPKEVPTLKWAYQAVAKLGGFYDSKCTGIASWATMWLGWDKLQDMLSGYYLSKETAALLNY
539992..540162                     PHAGE_Sphing_PAU_NC_019521: gp60; VV0557; phage(gi435844563)                         4.90e-05            VibriovulnificusYJ016MKLGRNDPCHCGSGKKFKRCCMSSVSKQHAQVFDDVETMLAMNPNLGRDSNMEMLC
540196..540471                     PHAGE_Entero_P1_NC_005856: InsA; VV0558; phage(gi46401643)                           1.09e-22            VibriovulnificusYJ016MATIQAQCRFCNQTEHVRKHGTGVTGFQRFRCIECKRSFQLDYVYEAYKPNVKKQIIDMAMNSSGVRETSRVLKVGYNTVLRTLKNSRQGK
540468..540893                     PHAGE_Shigel_SfIV_NC_022749: IS1 transposase B; VV0559; phage(gi557307573)           1.57e-38            VibriovulnificusYJ016MTSIPFDKANISLICEVDEQWSFVGKKKNRRWLWYAWEPRYKRIIAHAFGKRNTDALRSLLTLLKPFDISFFFTDDFSVYAKELPKEKHVVGKRFTQRIERTNLTLRSRLKRLVRRTIGFSRSEEMHDKVIGTFIEREFYF
complement(540909..542138)         PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; VV0560; phage(gi16130540)        1.62e-154           VibriovulnificusYJ016MAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGSFPDVSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKFSDRWLALKRESVKPETADKAYRALEKHILPKLGDVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIAGANITLSTRCLLEWQLHTMTRPIESATARWQDIDFENKVWVVPEERMKMKRPHTIPLTDQTLALLEIMKPISGHREFIFPSNKDPKSHVNSQSANMALKRMGFEGQLVSHGLRALASTTLNEQGFNPDVIEAALAHVDKNEVRKAYNRAEYLEQRRKLMCWWSDHITASAEGNVSLARRKGS
complement(542304..542379)         tRNA                                                                                 N/A                 GGCCCCTTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCCCCAGTTCAAGTCTGGGAGGGGCCACCA
complement(542525..544456)         PHAGE_Synech_S_CBS1_NC_016164: group2 RNA polymerase sigma factor; VV0561; phage(gi356870821)     1.71e-34            VibriovulnificusYJ016MVCISHTNSFTRLRSWIPSMDHNPQSQLKLLVIRGKEQGYLTYAEVNDHLPAEIVDSEQVEDIIQMINDMGIKVVETAPDADDLALSDETNITDEDAAEAAAAALSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQSSVAEYPGTIPYILEQFDKVQAEELRLTDLISGFVDPNADETAAPTATHIGSELAESDLEDEDNTDIDDEDEDEDEDGDSSSDSEEDVGIDPEMALEKFTQLRNSYQNLQLAVNEHGRESAQTAQAHELMLDVFKEFRLTPKQFDHLVNELRTAMDRVRTQERLIMKSAVEIAKMPKKSFIALFTGNESNEEWLDQILASDKPYVEKIKLHEEDIRRSIAKLRAIEEETSLSVNNIKDISRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPLPEELAERMQMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATATSLKAATKDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSETLRSFLDE
complement(544499..546295)         PHAGE_Helico_phiHP33_NC_016568: DNA primase; VV0562; phage(gi371671350)              2.09e-49            VibriovulnificusYJ016MYLPFSFLLGFMAGHIPRSFIDDLLARLDIVDIIDARVKLKKKGKNYGACCPFHNEKTPSFSVSQEKQFYHCFGCGAHGNAIDFMMEFERLEFVEAIEELASYLGLDVPREQRSTNTKFSQAPQASSSQKRSLYDLMASISQFYRNQLKLSSGKIAIDYLKNRGLSGEIVQKFGIGYIADEWDLVRKNFGQHPEAQEMLVAGGMLIENEKGNRYDRFRGRVMFPIRDRRGRVIGFGGRVLGDGTPKYLNSPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHLQVLFRQTSTVVCCYDGDRAGREAAWRAMENALPYLNDGRQLKFMFLPDGEDPDSYIRQFGKAQFEQQVTNAMPLSEFMFSSLAQQVDMSSKEGMAKLTTLAVPLIDKVPGGTLRLYLRELLGRRLGLVDERQLQQLIDRQGQTDKKPQPHRELKRTPMREVVALLIQRPSFSQLVPDLTPVKHLTIPGLSLLIEVLERCQARPNITTGQLLESWRGSQNEQLLSRLAGWEIPLDDDNEEDIFLDSLDKILAQCVEKQIENLQAKDRSIGLSADERRELMALMLDLKA
complement(546349..546792)         PHAGE_Bacill_G_NC_023719: gp509; VV0563; phage(gi593777964)                          4.27e-14            VibriovulnificusYJ016MALIEQLKEEQKLAMKAKDKQRLGTIRLALSAIKQREVDEQITLNDDDILAVLTKMVKQRRDSVTQFEAAGRQDLADAEKAEITVLEEFMPQPLNEDEVAALIDSAIAESGAAGMQDMGKVMAVLKPQIQGRADMGKVSGLVRAKLA
complement(546821..547036)         30S ribosomal protein S21; VV0564                                                    N/A                 VibriovulnificusYJ016MPVVKVRENEPFDVALRRFKRSCEKAGILSEVRRREHYEKPTTVRKRAKAAAQKRHAKKLARENARRVRLY
547265..548284                     PROPHAGE_Escher_MG1655: glycation-binding protein, predicted protease/chaperone; essential for genome maintenance; VV0565; phage(gi16130960)     0.0                 VibriovulnificusYJ016MRILGIETSCDETGIAIYDDEKGLLAHKLYSQIKLHADYGGVVPELASRDHVKKTIPLIKEALKEANLTAKDIDGVAYTAGPGLVGALLVGATIGRSLAYAWGVPAVPVHHMEGHLLAPMLEDNPPPFPFVAVLVSGGHSMMVEVKGIGEYKILGESIDDAAGEAFDKTAKLMGLDYPGGPLLSKLAEKGTPGRFKFPRPMTNVPGLDMSFSGLKTFTANTIAANGDDEQTRADIAYAFEEAVCATLAIKCKRALEQTGMKRIVIAGGVSANRRLRAELEKLAHKVGGDVYYPRTEFCTDNGAMIAYAGMQRLKNNEVSDLAVEARPRWPIDQLTPVMK
548406..549224                     PHAGE_Mycoba_Milly_NC_026598: hydrolase; VV0566; phage(gi764160985)                  3.28e-06            VibriovulnificusYJ016MKTFVIDDKSMAYQDVGQGPVLLFGHSYLWDSQMWAPQIEFLSQSYRCIVPDLWAHGESESAPTRCNSLVDYAQHLLALMDHLQIETFSIVGLSVGGMWGAELVSQAPARVTSLVMMDTFIGLEPEVTHQKYFAMLDAIAQSQMVPAPIVEAVVPLFFANDTKEQKPQLVSDFEQRLASLSGERAVEVARVGRMVFGRRDVIEDAEKFALPTLIAVGQQDKPRPVFESYLMHDVITGSQLVEIPNAGHISNLEQVEFVNQMLETFLAAVYAQ
550864..550878                     attR                                                                                 N/A                 AAAGCGGTTGATTTT
