gi|86738724|ref|NC_007777.1|  Frankia sp. CcI3 chromosome, complete genome. 5433628, gc%: 70.08%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
708438..709700                     PHAGE_Aeromo_31_NC_007022: hypothetical protein; Francci3_0624; phage(gi66391812)     4.58e-98            FrankiaspCcI3MHQPPIPHLAVADPELAGLVEAEATRQFSSIRLIASENYVSTAVLEASGSVLTNKYSEGYVGRRYYEGQQVIDPIETLAVDRAKALFGVEHANVQPYSGSPANLAVYLAFAEPGDTVMGLSLPMGGHLTHGWSVSATGTWFRSVRYGVRADTGRIDLDEVRDLALAERPRIIFCGGTAIPRTIDFPGFAAIAREVGAVLVADIAHIAGLIAGGAHPSPVGHAPVISTTTHKTLRGPRGAMLLSDAEHATAIDKAVFPGLQGGPHNHTTAAIAVALREAAAPAFRDYAHAVVANARALAEALVERGFDLVTGGTDNHLILIDLTSRDIGGKPAARALDQAGIELNYNAVPFDQRRPFDPSGIRLGTAAITTRGLGVGHMPVLAGWIDDVVKAAVVGDTATITRVREQVTELTAAFPMPGFA
709861..711132                     PHAGE_Mycoba_Backyardigan_NC_042308: hypothetical protein; Francci3_0625; phage(gi100057)     1.94e-06            FrankiaspCcI3MAKTVGAIAGSRTARATGSLGVVGAAAVAAGLVAERRMIRRRRETADLASDARMGPIGGWVTTVIAGDGVPLYIEETGPSDAPVTLVFVHGFCVTADSWILQQRALTDLGRMVFYDQRAHGRSGPSEVKNCTIDALADDLFRVITERVPRGPIILVGHSMGGMTVLGLADTHPELFDDRIVGVALLATSAGELARLTFGLPASVTGVVRRVLPGFAVGMRHAPSLLERARRRGSDLSWELTRRIGFGSTELPPSVVSFLETMVADTPIPVIAAFLPTLLDHDRLAAAERLAEIPTVLIVGDVDLMTPLAHSRTLAEALPRAELIVEEGAGHAIMLERPDVVNAAIREIARQATAPRAMPRPRSGSAQTGRSAPAQTGRSAPAQTGRSGRTGRSGSGRTGRSARSETFSVSPRGPRSEATTEGA
711129..711602                     hypothetical protein; Francci3_0626                                                  N/A                 FrankiaspCcI3MNTVEVSTAERMREFGAWLATLLRPGDLLVLSGPLGAGKTVLAQGIAAGLGVRETVTSPTFVLARIYPDGRIPLVHVDAYRLGGVVEVDDLDLDADVDTSVTVVEWGAGLAERLTQDHLEIVISRPRADEVGETRIVRLVPSGASWIERLRARAPVS
711715..712479                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; Francci3_0627; phage(gi16129761)     8.07e-11            FrankiaspCcI3MALDTSTAACSVALAELTSSDPARPVSGTGGERAAPGVHVWPRAVMVTVDARRHGELLAPSMRAVLAEGGARPTDLDAVVVGAGPGPFTSLRVGMVTAAAFADALGVPVHGVCSLDAIGAATGGSVAVVTDARRREVFWACYRDGVRVGDPAVGRPADVVRFLRGLGVDRVVGPGTVLYPEIFAELAGTTAGATAGEVPAPGAGQPDDGYPRPELLVGLAGADVLAGRAPQPLVPLYLRRPDAAEPHTPKPVTV
712476..713063                     PHAGE_Erwini_vB_EamM_ChrisDB_NC_031126: hypothetical protein; Francci3_0628; phage(gi100098)     8.64e-06            FrankiaspCcI3MTQPRPHPAGPDGPDLLLAPMRWWHVAMVAELEQTVFDIDPWTAELFWSELAQGEQRRYLTALWRPQGVPTHDTSAIVGYAGLALAEDGAYIQTIGVVPRMRGRGVGARLMIALLRDARRAGARNCGLEVRTDNQAARALYSRLGFVDIGLRRGYYQPSGGDAYVMRVRKIDTVGYAELLDRVEATLLITSRVEP
complement(713181..713816)         phosphodiesterase; Francci3_0629                                                     N/A                 FrankiaspCcI3MPHLLHVDSSLATESSTSRSIATIFAEAWREAHPDGIITYRDLSVTPPPHLDWATVSARFTPPEQLSAEQAEAVKKGEELIAEVEAADEYLLSVPMYNYAVPSTFKAWIDQIIVMGRTVRQAPDDSALTGKKVTVVTAQGGSYGPGTPKEGWDHQQPYVAHILAALGATDIEFIRVEMTLAPVNPALAEFIDLFQRSKAEAAAAARLRASV
713983..714567                     MarR family transcriptional regulator; Francci3_0630                                 N/A                 FrankiaspCcI3MAAGLPPGLESLPDGPGKDLGWLLGQVRYGYAAASAAAVGRVPGGLRGLHVLGAAVEGEARNQIEVARRFGIDRTVMVRLVDDLERAGLVERHPDPADRRARIITATEHGVQLYRASQEDRLLVDQHVLSPLTAAERATFIDLLRRVAAHMLAVDPTHGAAACDAARREIDARDIGMACAPDGTCPGQSAPSDG
complement(714678..714953)         hypothetical protein; Francci3_0631                                                  N/A                 FrankiaspCcI3MIWMWEAKAAPGRASGLRDWAIDALAGRDGEVYVSSQRGEDLVVIMLRTPPDAGMSVQTTGDTRCPLPKPPAELANGDPHTWQFEQVHPPH
715256..715561                     PHAGE_Serrat_BF_NC_041917: L-shaped tail fiber protein; Francci3_0632; phage(gi100266)     4.11e-08            FrankiaspCcI3MTTATKVAIKPLEDRIVVQPSDAEQTTASGIVIPDTAKEKPQEGIVLAVGPGRFEDGKRVPLDVKVGDVVLYSKYGGTEVKYSGEEYLVLSARDVLAIIEK
715686..717326                     PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; Francci3_0633; phage(gi526178751)     1.72e-99            FrankiaspCcI3MPKILTFNEDARRALEHGVNALANAVKVTIGPRGRNVVIDKHYGAATITNDGVTIAREIELEDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQEMVRFGLKQVTAGAAPLTLKLGIEAAVEAVSAALLKQAIEVNSKETIAQVAAISAQDPQVGELIAEAIDKIGKDGVITVEESQTLGLDLELTEGMQFDKGYISPYFVTDAEAQEAVLEDAYVLLYPGKISALNEILPVLEQVVQERKPLLIIAEEVEGEALSTLVVNSIRKTFQVVAVKAPGFGDRRKALLQDIAVLTGGQVVASEVGLSLDAVTLADLGRARRVVVDKDNTTIVDGVGEASSIADRVRQLKQEIEVSDSDWDREKLQERLAKLAGGVAVIRVGAATEVELKERKHRLEDAVSATRAAIEEGIIAGGGSALTHVASVLDDGLGRTGDELAGVRIVRRALDAPLSWIARNAGLEGAVIVSKVKELEPGRGYNAATGEYTDLIAAGVIDPVKVTRSAVANAASIAALLITTEGLVVEKPAEPAPQDGHGHGHGHSHPQGPGF

#### region 2 ####
1021783..1021794                   attL                                                                                 N/A                 CGCTGGACGGCC
1021971..1022333                   PHAGE_Mycoba_Che9c_NC_004683: gp41; Francci3_0877; phage(gi29566149)                 1.08e-07            FrankiaspCcI3MSAGRQGSVRKDASGRWFFVVDITAAGGPRRQARRRGFATKKAAQAALTGFLGKLAAGTYVEPSRLTVREFIETRWLPAVEGELRPSTLASCRRNLRLHVLSRLGGVRLQLLDTATLQAL
1022447..1023736                   PHAGE_Brevib_Abouo_NC_029029: integrase; Francci3_0878; phage(gi971767210)           5.78e-25            FrankiaspCcI3MGPDPTQPGGPDQAAAAEGPGRAAHEDPHLDERRTPDLPRRHPRRTDLRPAPHLATTGVRRGEALGLAWSAVDLDAGRISIRRTLVNVTTSDTGRVPVFSDPKTVRGTRVIALDTATVTALRDLRESKLKELALLGREPEADLVFTHWDGRAMHPERNSRAFLRRVRRLGLPVIRLHNLRHTWATLALASNVHPKVVSERLGHASITITWRSTATFCPACTPMPRKSSPGSSSALAGRPTRTRRTGPTAVATRPTRTTPMAWVMTMRNRVRLRQTARPPARGLLVRPLRSRPGRDQSVTKRAQTIRGGTVGEHLTCENAAVQRVHLLGRYSNTPEVLTDLQTVWAVVAETPGQGETQELPGLTGSGQVPRRHAIVDRLPASDIETLISLYLAGSTARALAARYSISLTAVKTLLRKRGIRRNRRSAEPS
1023820..1024800                   hypothetical protein; Francci3_0879                                                  N/A                 FrankiaspCcI3MEHAPSHERIINQADVLPAELSHDERLIKQGIEAAAQEERPIDDRTARYIAGQLHGGQVSALYSLASTGNIIEDTVYHELYEDLESHTPEVASWVEALRAYCQARPDKGPVRGWTEHAAILDRIDATRERARMLGGIAIAPELAEANEAPGKDHALNPDRLDELFGEPPDEEVGRADELGWFGLIVDHGTGGGTIISQDEQGFRYVWETANGEALDQRWQAILREYGTYEDSLVDLERRGLDARHERVGYACLACEEPIVEQANGLDRSTWTHQDGEPLCPVVDGTGYEPAKPGVWRDGEVVPLADEADGDDAHWRRTASLCGQLG
1024784..1025314                   PHAGE_Rhodoc_CosmicSans_NC_028677: ArdA; Francci3_0880; phage(gi966199624)           9.96e-23            FrankiaspCcI3MASLADYSNGYLHGRWVAADRDTEDLQAAVDRILATSPARQHGEAAEEWAIHDYEGFEDDVTSTLGEWPSLQDLSKVAKGIAEHGLAFGAWVAHLGRADDELVDRFEEFYRGEWGSLTDYAEDYLQNIDFYRFLDDLPEDIRHYVSVDVEQYAEDIACDLHVADTPEGGVWVFSVS
complement(1025431..1027164)       PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; Francci3_0881; phage(gi26989833)     1.16e-33            FrankiaspCcI3MLRCVTVVESGAGAAASGEVAEGAALLAENAWLRARVAELLTDIAGLVAREATREAEVVELRLQLEALQAELATLRRMLFGRSSERECGGSPAVGSPDGGDGCGDGARGEAAGSAGRRRGPGARSGRRSYDHLSRDEVDCDFEGGGYGCLSCGQPFTPWGEHVVEQLDWLVTVRVRVSRRRRYRRGCRCGGSLTVTAPGPSKAIGKGLFTHRFLAMLIVERYVAGRSQNSLVTGLARHGAQLSPATLTGACAQVAGLLAPLAEQIVGRSRGSWHLHADETTWRVFTPTGGGGPARWWLWVFLGPDSVCFVMDATRSTAVLAEHVGLDPDSGQLTDDADGGPRRLVLSSDFYTVYVSAGRRADGLVNLYCWAHARRYFVRAGDANPAQLGIWARQWVERIRALYTAHGELAAAWHTAAAAPSPATEKRLAAAYAGWDTAITVIDTVRREQTASPGLQEPARKALATLDREWDGLVAHRDYPMIGMDNNPAERAIRGPVVTRRNAGGSRTEDTARHAATIFTVTATAAMHNLNLLTYLENYLDACGRAGGKPPTGADLDRFLPWAASPEDLTTWQQPPG
complement(1027311..1027859)       PHAGE_Mycoba_Che9c_NC_004683: gp32; Francci3_0882; phage(gi29566141)                 1.01e-14            FrankiaspCcI3MNPPIRRTSSEIRAIELLKDCGYANYIPVPVDRIAASLRAVVRYQPFEADDISGLLLRQDGQPAIIGVNSVNAPVRQRFTIAHEIGHLLLHEGKGLILDRLVRVNFRDAVSSTATDRQEREANAFAAALLMPDERIVEQLDQLTSGRLRSDTAIVQHLARTFDVSRQAMEFRLINLGLLSPA
complement(1027856..1028206)       PHAGE_Thermo_THSA_485A_NC_018264: transcriptional regulator, XRE family; Francci3_0883; phage(gi397912660)     4.19e-06            FrankiaspCcI3MQDVELQRGLAQSVRKHRRQRGWSQAALAERLGLTRTTITNIEHGAQGITLLTFVRLAEQLNVGAPELLAEVIAGRPAPSAAPEAPGPYREWVASIASMPGDDNVSAHVADDGNTS
1038183..1038194                   attR                                                                                 N/A                 CGCTGGACGGCC

#### region 3 ####
1426429..1426473                   attL                                                                                 N/A                 TGGAGCGGGTGACCGGGATCGAACCGGCATGGCCAGCTTGGAAGG
1433734..1434030                   PHAGE_Mycoba_fionn_NC_027365: gp49; Francci3_1200; phage(gi849254306)                7.56e-06            FrankiaspCcI3MADTAPRDNRTPTRPASKPTPATLPAPCRAVYTVAEAAHMLSLSLASTYDLLRRGDLPGRRLGRRWVIPRDRFHTWLDNLPAADPHDTDPADGQDNQP
1434027..1434914                   PHAGE_Liston_phiHSIC_NC_006953: hypothetical protein; Francci3_1201; phage(gi62362410)     2.38e-08            FrankiaspCcI3MTTPRPSMLPAAVTYADQGWPVFVLGRTKRPVANCEPCAQAGPDHDREACPCLTCHSFYAATTDRNRIVAMLAAVPDGLLAIRTGTAAGLAVIDIDPRNGGTLDRSLMTPTAAVATGGGGWHLYYRHPGHPVLSRPLTGAPGIDIKADGGLVVAPPSLHPTTGRPYQWAGTRPVAEMPPALIAAVAADPPMTKPAPPRSCTPARVSSRAGEAGGISNPAALLAAHLAAVARAPEGRRRTTLYGAARGIARMVAAGHLTTTEAWAALTDAGHTADQTDRDINAAITGGFHAEGVPT
1435019..1435345                   excisionase/Xis, DNA-binding; Francci3_1202                                          N/A                 FrankiaspCcI3MAQSLTSPQAGGVVLAIPARHRASTRPAAGTTSPPAPLGDILTVEQAAARMNMSVRYVRRLVAERRIAFHRIGRSIRLTSADVDAHIAAGRVESLTVSKVWRDVRSVI
1435345..1436529                   PHAGE_Mycoba_L5_NC_001335: Integrase (Y-int); Francci3_1203; phage(gi9625463)        1.67e-53            FrankiaspCcI3MAARRRFGSIRRRESGRYQVRYPGPDGQQRTAPETFARKSEAERYLTLIEGQILRGEWIDPERGKVTLTDYAARWIVERPNLRPRTIGLYSGLLTRHITPYIGGIPIGKLTTPIIREWRTKLLESGVSVGTTAKAYRLLRAVLMTAVREDELIRTNPCRIPGADQENAPERPVLTVSQVFALAEKLGGRYRALVLVTTFASLRWGEVAALQRRDLDTDDGIVHIRQSLVEIGGQGVVLGPPKSRAGVRTVSLPAVILPWLRIHLAEYVADDPAAFVFTGPKGGFLRRGNFRKLVGWSDAVAAIGMPNLHFHDLRHTGNTLASRTGASLRDLMTRMGHDSPRAALIYQHASTEADAAIADALSAVLAAQQGSVPPPAPRPDDTPEDGAAGALVPA
complement(1436620..1436693)       tRNA                                                                                 N/A                 GCGGGTGTAGCTCAATGGCAGAGCCCCAGCCTTCCAAGCTGGCCATGCCGGTTCGATCCCGGTCACCCGCTCCA
1436620..1436664                   attR                                                                                 N/A                 TGGAGCGGGTGACCGGGATCGAACCGGCATGGCCAGCTTGGAAGG
1436741..1436816                   tRNA                                                                                 N/A                 CGGGGCGTAGCGTAGTGGCTAGCGCGCCTGCTTTGGGTGCAGGAGATCGGGAGTTCGAGTCTCCCCGCCCCGACCG
1436871..1438322                   trigger factor; Francci3_1204                                                        N/A                 FrankiaspCcI3MKATKETLSPTRVKLTVEVPFDELKPSLEATYRKLARQVRVSGFRPGKVPPRILDQRLGRGVILDEAVQEALPQLYSEAVQAEEVDVLSRPEVDITEFADGGQLVFTAEVDVRPEVTLPEFSELEITVDAVEVTDEQVEEQLGALRDRFAVLTPVERAVQAGDYVSLDLSAEADGTPIDGAEATGLSYEVGSGNLVEGLDDAIIGATDGETRTFTTELLSGEQAGQPAQVTATVRGVKEKELPALDDDFATTASEFDTLDELRADIRTRLEQSRRTEQVGQAREKLLESLLERVEVPVPGSLLAGEIEAREHRLSRELEYIGTDRPSYLETLGQTEEEFDAEVRESAGKAIRSQFILDAVIDAESIGIDQGELMEQLILRAQRSGVQPDVYAQQLAQGEGLTALMADVLRTKALFLLLENAKVVDGAGTPVELALPARSQPDTDADADHDRDVTVAAEAVAPGDGDATVEPVEPVEAETDGNG
1438658..1439299                   PHAGE_Agroba_Atu_ph07_NC_042013: ATP-dependent Clp protease proteolytic subunit; Francci3_1205; phage(gi100676)     8.68e-59            FrankiaspCcI3MSNIAAPRLPVPGPDLRAPGQGGPAFDDQVFNRLLANRIVFLGSVVEDSIANAICAQLLLLNAEDPTRDIFLYINSPGGSVSAGMAIYDTMQFVENDVATVSLGLAASMGQFLLCAGASGKRYSLPHARIMMHQPSGGIGGTASDIAIQAEQMLYTKRMMQERIAFHTGQPIEQIERDSDRDRWFTAEEAKDYGFVDHVVQQARQVPSEGPVS
1439356..1440036                   PHAGE_Agroba_Atu_ph07_NC_042013: ATP-dependent Clp protease proteolytic subunit; Francci3_1206; phage(gi100676)     1.77e-60            FrankiaspCcI3MFHDTLYQQMRHEQARQAAAQPQGRYVLPNIIEKTSRGEYGMDPYSKLLKERIVFLGVQIDDVSANDVMAQLLFLESEDPDRDISIYINSPGGSFTSLTAIYDTMQFVRPDISTICMGQAASAAAVLLAAGTPGKRFALENSRILIHQPSAQGEGQSSDIEIQAREILRMRSLLERMLAVHTGKKEEDIRKDIERDKIFSADEAKEYGLIDEVIKTRKSSRLATAR

#### region 4 ####
complement(2079005..2079445)       PROPHAGE_Pseudo_KT2440: transposase, putative; Francci3_1746; phage(gi26991145)      1.80e-05            FrankiaspCcI3MPANIRSRVLALTRATPPAETGLTHWSSRELAKYVTRTTGVSISWHFVAKLWRENHLQPWRQGTFKLSRDPEFADNVMDIVGPYLPADGRGGAQLRREDAGPSTGPYPAVAADHVRRHREAYPRLRPPRHHQPLRDNRSRNRQGLR
complement(2079853..2080584)       HAD family hydrolase; Francci3_1747                                                  N/A                 FrankiaspCcI3MRRVEAVLFDWAGTLTPWANVDVAGFWALAAAYVVGRNPEKTAAALLAAERELSVRARERHSSATLAELFSLAGVPHTEQAAAAYLDAWTPHTLLDPLAPRLLTELRERGLRVGLLSNTTWPRERHEAIFARDGVLDLFDGAVYSSEIPWAKPHPEAFRCALRAVGDVPPENAVYVGDRLYEDVYGARVAGLRAILIPHSEVPEKELVAIEDTTPDAVIYRLDDLLAIIDGWNAPGVPVEGVS
complement(2080581..2081159)       PHAGE_Pseudo_PaMx25_NC_041953: hypothetical protein; Francci3_1748; phage(gi100037)     1.56e-36            FrankiaspCcI3MSLTYPDGRAGLADEVADGTDPLEGLARQLLVEIGEDPGRDGLRETPARYARWWREFVGFDPGNTETAFEQVNHGQLVQVNDIRVWSLCEHHLLPFWCDISIAYLAKDKLLGLSKFARIAHHHAHRLQVQERLTGAIADAIEALCGVPDVAVRAKGEHLCMTMRGIRSPATMSTLVLRGVFKDDPHMRNLLS
complement(2081150..2081731)       PHAGE_Burkho_Bcep1_NC_005263: gp18; Francci3_1749; phage(gi38638625)                 1.90e-05            FrankiaspCcI3MNGKRPVEPPAEPRTTDRFTRPLPAALVVIPGTNGTVTFVHQQKGPYAGNWLLPGGGIEPGETAEAAARREALEETGCQVESLRPVAVYEFFGRWRNGDYHLLMFAFAAAEPVTVPRGFRGDGVGRIIQARIDEIQLHSTDLQILTDAGFAAFGRDDINRALSADRITMVAHAIAGSTTMAPGRTEGGIDSCR
complement(2081734..2082996)       3-polyprenyl-4-hydroxybenzoate decarboxylase-like protein; Francci3_1750             N/A                 FrankiaspCcI3MTSTLDHLAPIDLPQFGLGPHYAATKVRMCAEPLSTDVEVMRRLAEFERLLGRRPTTLFTQLTDRPGTVLLGHPYPRAVLLAALGTDEGHWLDEVAARLAGPAPAPAAGARPALTELPGLSALPIIRHRPGDVGRYVTAGVGVTTRPDRDGVNLGIYRIQVVGEHEARIFLDPRTDGHANLGAWTDVGEPMPISVFLGADPVHMMVAASRLPARDGAALDNVEDDYRVAGMLLGRAVRTHGSPPVPESATHVLHATVRPELAREGPFGEFKGYYAEERMSNVLDVWEVLAAPGAPMPTILAGGESGLTLMSMQNEYLMYAHLTEIGVPVRTVHYPLPARGEFLALVETDEPTREVLAEAMRFDVRSKVVVCGPDLKSIWQALATHGFSSRVEPYLRKGRVEGERLGLLLDIPPTGRPVEY
complement(2082993..2083529)       PHAGE_Cellul_phiST_NC_020842: hypothetical protein; Francci3_1751; phage(gi472339898)     2.63e-07            FrankiaspCcI3MIQQTDATPMWTRRGPYVFEWADVGRACERLRASVLADGFAPTVVYGVARGGLVTAAYLYSALEVPRLVSVRARRTVSDERYAAKQTPVVESSVELDPEDRVLVVDDIAGTGVTAEAVSRKLVGVAEHRFAVLARNHLCPVPIHYCGFTADDWVVFPWERGYRKRPSDWRQIPWTEEQ
complement(2083526..2084683)       PHAGE_Staphy_42E_NC_007052: ORF012; Francci3_1752; phage(gi66395520)                 2.85e-44            FrankiaspCcI3MTIFGQPIRTGLSFDDVLLVPHRTRVRSRADVDTTVDLAPGVRLWVPVIGANTQWCTGGAMAAALARVGGLGFVHRMQTVERQATHIASVKSGPVGTGPATVDPVGRLLVGAAVGTKGDYLDRAALMVEHGADLLLVDVAHGHSDQVIDTVGKLHARHPRVPIVAGNVATAGGTNDLLDAGADVVKVGIGPGGVCTTRLVAGSGVPQLTAIIDCAHAAAQRDATVIADGGVRQSGDLAKALAAGAAAVMLGSALAGADESEAGVVDLPDGSRYRCSRGFATLGMANTLRAAAGGRLTRDDVVGYIPEGVEMTFAPSGPVADTVYQLVGGLRSAMSYTGAADMAEFRRLAEFIRVTPAGRAENAPHAAERAPQPAPDFRAEAVAQI
complement(2084720..2085475)       PHAGE_Mycoba_Godines_NC_042050: DNA topoisomerase II large subunit; Francci3_1753; phage(gi100005)     1.49e-41            FrankiaspCcI3MTAKESCRPNTSPTGHDVLVVNEIFGPTVQGEGPSTGRRCVFLRLGGCNLTCSWCDTPYTWDWWGVSDTGRRFDPGRELHAMSAAQVGDRLRGLGSGLVVISGGEPLSQQRRLLGLVTGLVDDGIEVEIETNGTVAPLEELAESGVAFNVSVKLAHSGVAEPRRLVPEALAAFAGNPSARFKFVCADRDDLDEVGTLVDRFNLAPVWIMPKGATPSAVLTGLAMLTDAAVARGWNVCTRLHVLVWGDERGR
complement(2085472..2086419)       PfkB; Francci3_1754                                                                  N/A                 FrankiaspCcI3MLDSARLLAPLGPGRAARPERVGVLGSMVLDRRWSRSGSMSGLPVWTVLSGHGGIARNVAENLARLGAEAGFVGLGEPGPVGAAFERRLTGLGAAVLTAPVARSIGQFDCEISTEGDPVWAGIHLPAADELSWPVVAAATGWLRGARAVLVETGSPLATLTRLRVWANRRGVPLWGLPTDIAASGPRWELFRSLALMVLNQFEAAELLGGGTGDPVTDALALTARGLPAVVVTTGARGAVCAAADGSWSTYPARQVSCVDATGAGDAFVAGLAVALARGEPWIAAVDHAMAAAAVIVGCGRSTCARLSRLDKDPI
complement(2086421..2086855)       PHAGE_Pseudo_NP1_NC_031058: hypothetical protein; Francci3_1755; phage(gi100037)     2.58e-05            FrankiaspCcI3MGSCANWFAALAVGLAWKGQPVFAIRKEFGFSASHVLDHLPADHPCSRMHGHNYTVVLELKAQESGLNEAGFVRDYRDLGEFKAWTDDTLDHRHLNDVIIDLNPSAEQLARWIFTTWREKLPELVAVSVSETPKTWAEFRPRVD

#### region 5 ####
5026458..5026469                   attL                                                                                 N/A                 AAGCGGAGATCG
complement(5026684..5027664)       PROPHAGE_Escher_MG1655: IS30 transposase; Francci3_4210; phage(gi16132105)           1.97e-84            FrankiaspCcI3MTVEDRELISRELSRNRSARFIAKALGRHHSTISREIERNGGESAYRAVDAQARCDAMRKRPKERKLVASAALHDAVNAALVEKWSPKQISERLEKDFPDDESMRVSHETIYECLYLQARGELRTQLTIALRKGRARRVNRSRTAVARGRIVDIVNISERPKEAEDRAVPGFWEGDLILGKGNKSQIATLVERTTRFVMLVRIPYDRNAEKVAYLLARKMETLPDFMKKSVTWDQGKEMARHAKFTVATGMPVYFCDPHSPWQRGSNENTNGLLRQYFPKGTDLSLHTQAELDKLAEQLNGRPRQTLGWAKPVEVFNDLLANHASL
complement(5027998..5028930)       PROPHAGE_Escher_MG1655: predicted transposase; Francci3_4211; phage(gi16131356)      1.18e-11            FrankiaspCcI3MTHRVDSYPADHGHSGSSLSRDHAPSPPNLRQSRPLDRLLRGAAGPDGKTPHLLAAVTHATGAVLAEHQIGAKTNEVPAFVPLLRELHTYHPPTGHVITADAAHTNRAHAEAIVTELGAHFVFTVKNNTPALAVDCHQVTDWTKAPIGHTTEGKAHGRLEKRTIQLAEASEAIRARHPHARTVARIRRRTTRTVTRGTPRRRVTRRTTTTTTVHVITSLAPGEVTAAELATYVRDHWTVENRVHRVRDVTFREDASRVRTGPPPRVLATFRNLAIGLLRQAGHPRISPTPRRLRHDPALLTAILGLENPA
5028950..5029804                   PHAGE_Ralsto_RSA1_NC_009382: transposase IRSO15-like; Francci3_4212; phage(gi145708108)     1.89e-10            FrankiaspCcI3MKVAFSGLSPLVVEEVVDDGELVRLRARTPDATASGPSCGAETSRVHGYHLRTVADLPLDERRVVVVVRVRRLVCPTRGCRQTFREQLPGVLDRYQRRTSRLARQVGVVVRELAGRAGARVLSALGVVVSRHTALRALLRLPLPARRVPRVLGVDFALRRRRYATVLIDAETRQRVDILPGRLAGSFEAWLRAHPGVEIVCRDGSGAYAEAVRRVLPDAVQVGDRWHVWRVRREALVRREALRIEGGARPPRWAVAAVRWELSAVRPGRRRGGREAALRACPGS
complement(5029811..5030335)       PROPHAGE_Xantho_33913: IS1480 transposase; Francci3_4213; phage(gi21231089)          7.40e-26            FrankiaspCcI3MVDSQSVKGAQTVGADSRGYDAGKKVNGRKRFVIVDTLGLLLTVLVVPANVQDRDGGRRLLIDHYFTHHRCRHLFADGGFAGQPVAWARTIMRTTVEIVRKKPGQKTFEALPKRWVVERTLVWLTAHRRLARDYERHPATSASFIHWAMIRTMVRRLVRGNPVPRRQPRDTTER
5030772..5032019                   PROPHAGE_Shewan_MR-1: ISSod7, transposase; Francci3_4214; phage(gi24375048)          1.43e-23            FrankiaspCcI3MTDTGSQLTDWISLGVLTSFVSRDAVDGAIEATGRGARRSDTTIPPRVAVYFVMALALFADDDYEAVACRLAATLDDLDVVGPRWEPTSGGLTKARQRLGSAPLAELFCQVAGPVADLDTVGAFLGPWRLMSIDGLEWDVPASRENVAAFGLPAGRDGAPGALPKVRAVTVSECASHAPVLAAFGPAGGAKSASEQALARTLYPRLAERWLLLADRNFYSWTDWCTAADTGAALLWRVKASLRLPPLRALSDGSYLTVLVNPKIGGKARDALVAAARAGEVLDPAKARYARLVEYDVPDRDGDGKHEIIGLLTTICDPREATATALAGAYRHRWEHEIGNKQLKTYLRGPGKVLRSKHPDTVYQEIYGYLLTHHAISALTCQAATAAGIDPDRIKFKRAVRIIRDRVVTDPAFSP
5032291..5032659                   hypothetical protein; Francci3_4215                                                  N/A                 FrankiaspCcI3MQKDPGQALTDRLPRGPASSMSVTYTAELPLGAHTVARRAVLLVAERKRRGTRAGTRRLSCWDQAVFVLRWFCDGTRMRQLCKDHRVSRSAGYRYLHEGIAVLAWQAPNGTYRAAVRQARFR
5032806..5034080                   PROPHAGE_Escher_CFT073: transposase; Francci3_4216; phage(gi26248352)                1.63e-19            FrankiaspCcI3MDLLEAAGPGAERRETRMLFVGDDWAQDHHDVEVQDETGRRLAKGRLPEGVAGIARLHALIGRHLAEDAGPEQVVVGIETDRGPWVRALVAAGYQVIAVNPLQAARYRERYSTSGAKSDAGDAHSLADMVRTDRHQLRPVAGDSDTAEAVKIVARAHQNLIWDRTRQTQRLRSALLEFFPAALAAFDDLDTPDALELLAKAPSPAEAARLTVAQISAALRHARRRKIPERAAAIRAALRAEQLPVTPAATTAYAAVVRAQAGLLAALNGEIARLEEQVADHFDQHPDAKILLSQPGLGPVLAARVLAEFGDDPTRYADAKARKNYAGTSPITRASGKKKTVLARYARNNRLADALHQQALSALSASPGARSYYDAIRARGTSHHAALRQLGNRLVGILHGCLKTHTPYSEATAWTQKATLDVAA
5034097..5034663                   transposase, IS4; Francci3_4217                                                      N/A                 FrankiaspCcI3MSDLPGALLAAKAAGYDHVIVDGTVIETDRVRLPGPTPGVDLWWSAKAHNHGGNIQVVSAPDDGWPLWTSDVRPGREHDSTALRASGALPVPADWTTEVGEILTDLGYEGLRDQVTIPAKRAKGGGLTLDQQNHNRTHNPLRAVGERANALLKVTFRALRNVTLDPWKIGQITKAALVILHTEHGRTT
complement(5034800..5036101)       PROPHAGE_Escher_MG1655: predicted transposase; Francci3_4218; phage(gi16131356)      8.73e-19            FrankiaspCcI3MPVQSRMPVTPTDLGQAGSGQLVRMRRSLRVLGAHGGEVQGLADVLAGVPDPRDPRGIRHRLPVILGLSAAAVAAGEKSVEEIAAWAAHAPTQVLTALGARVHPVTGQPQAPSVDTMIRVLSAVDSSALARAVGMFAAARARQARGGGRRVVAVDGKTLRGAAGPEGRAPHLLAVAEHGTGVVLAEHEVGAKTNEVTAFAPLLRELHSHDPLDGVVVTADALHTTRAHADLIVTELGAHFVFTVKANTPALSVDCHQATDWTKIPIGHSAEGRAHGRFERRTIQLAQASEAIRARYPHARTVARIRRHVRRTVTTGTGRARVTRTIPSTVTVHVLTSLTLDAVTPADLAGYARGHWTIENKVHWVRDVTFREDASRVRTGPLPRIMTTLRNLIIGLIRLAGHNRIAPTIRRIRHDNALLLAILTLDNPADLHQ
5046469..5046480                   attR                                                                                 N/A                 AAGCGGAGATCG

#### region 6 ####
5036963..5037415                   PHAGE_Pseudo_phi3_NC_030940: protector from prophage-induced early lysis; Francci3_4219; phage(gi100001)     1.87e-06            FrankiaspCcI3MVHGTREHVDALHGQVSRVLAGMGLALSPAKTRIVHLADGFDFLGFRIVWKRKRGTDNWHVYPFIADEPVASLKRKIRSLTRKLSHLDYRIALIRINQIPRGWAAYFQHAVAKQGDPQSLFVQVDGVRRGAGGWGRWWCEDPGPAAVSSL
5037618..5038919                   PROPHAGE_Escher_MG1655: predicted transposase; Francci3_4220; phage(gi16131356)      8.73e-19            FrankiaspCcI3MPVQSRMPVTPTDLGQAGSGQLVRMRRSLRVLGAHGGEVQGLADVLAGVPDPRDPRGIRHRLPVILGLSAAAVAAGEKSVEEIAAWAAHAPTQVLTALGARVHPVTGQPQAPSVDTMIRVLSAVDSSALARAVGMFAAARARQARGGGRRVVAVDGKTLRGAAGPEGRAPHLLAVAEHGTGVVLAEHEVGAKTNEVTAFAPLLRELHSHDPLDGVVVTADALHTTRAHADLIVTELGAHFVFTVKANTPALSVDCHQATDWTKIPIGHSAEGRAHGRFERRTIQLAQASEAIRARYPHARTVARIRRHVRRTVTTGTGRARVTRTIPSTVTVHVLTSLTLDAVTPADLAGYARGHWTIENKVHWVRDVTFREDASRVRTGPLPRIMTTLRNLIIGLIRLAGHNRIAPTIRRIRHDNALLLAILTLDNPADLHQ
5038986..5039198                   putative maturase; Francci3_4221                                                     N/A                 FrankiaspCcI3MIRWVMHRHRRSWTAIRRWLRTPHGGRKDIELDGMTLFHLGQVPITRYRYRGGNIPTPWPDALTGPTPTA
5039812..5040123                   insertion element IS466S transposase; Francci3_4223                                  N/A                 FrankiaspCcI3MAACPEMTALAGLVRSFAAMLTPADGNAERLTAWISQARTEDLPHLHAFTRGLELDRDAVNAALTCAYHNGGTEGVNTKTKLIKRQMYGRAGFALLRHRILLG
complement(5040136..5040582)       hypothetical protein; Francci3_4224                                                  N/A                 FrankiaspCcI3MSRGEALGGLWACSRGWRQRGPVGTGLPRSHPREAPLPVQSRKPAEVSHPAGEAQEALAVLATAGGPVAECFEQIPDPRDPRGVRHRLPVVLSLCAAVLCGESGLAGVAAWVAAEGPGDPTGEGCRWPRPGIAVDGAVKFSALSQIRW
complement(5040649..5040888)       PROPHAGE_Brucel_1330: ISBm1, transposase orfB; Francci3_4225; phage(gi23501425)      1.17e-11            FrankiaspCcI3MIPEKADQKANRKKRGSLGGRPVSHDATLYKDRNTVERSINKIKEWRGLATRYDKTPESYAAGLHLRGSILWLRSLPTP
complement(5041222..5041638)       PROPHAGE_Brucel_1330: ISBm1, transposase orfA; Francci3_4226; phage(gi23501424)      5.53e-22            FrankiaspCcI3MTRGDLTDGEWELIEPYLPLGASGLIPDLRSYVNAVMWRFRTGSPWRDVPERYGSWSTIYDRFRLWAQDGVFQTLMDAMITEAAARDDVDLSLASVDSTVARAHHHAAGMVVDPDLLVDLEKALTEEKGLQKPGKTTV
complement(5041868..5043166)       PROPHAGE_Mesorh_MAFF303099: transposase; Francci3_4227; phage(gi13475318)            2.45e-26            FrankiaspCcI3MVVLTVVFMRVAVVGMELGEMGRVRPVIERFAGEMFADLPRRDQRGKGELYVQRLLTDGKRKSMVPMAARLGVDPQQLQQFVTSSTWDYRQVRRRLTGWAAGFCDPVALVVDDTGFPEGRAASPGVARMYSGTLGKVGNCQIGVSVHAVTDWASAAVAWRLFLPTCWDDTTLTDPTEVAAARARERAAIPDKARHREKWRLVLDMIDELAGWGMPVRPVVADAGYGDAAAFRQGLTDRNIPYVLAVKPTATAYPADAVPVTAPYPGNSRRPTPAYPDPPRDLKSLVMAAGRRTGRSVTWRHGTHRTPANPTAGMRSRFLALRVRPAGRNITRNPDRSLPVCWLLAEWPVGQPEPTDYWLSTLPTGIPLRDLVRLAKIRWRIEHDYRELKDGLGLDHFEGRTFAGWHRHVTLVRVAQALCTQLRRTPKVPAPA
