gi|108802373|ref|NC_008147.1|  Mycobacterium sp. MCS plasmid1, complete sequence. 215075, gc%: 66.61%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
149207..150646                     PHAGE_Strept_Caliburn_NC_028892: serine integrase; Mmcs_5572; phage(gi971753190)     6.29e-48            MycobacteriumspMCSMAKAKTPGQRVGVGSAAIYARISADVEGTGLGVARQVQDCRKLAADRGWQVGDEYVDNDVSAYSGKPRREYARMLDDLKSGARDAVIVYNLDRLHRRPVELEEFVALCESVGVRDVATVTADIDLGNDDGLFMARIFAAFAAKESGRKSARIRRKMLQNAEQGLPHGSARPFGYEPDKITVCSKEAKVIREMVARYLAGASIRSLTIWLNDAGLAPAVAKSWQTTAVRQILASGRIAGLREHHGEVIGPAAWPAIITHAERDRILARMTARSVTKTRAPRTYLLSGLLRCGRCGNRLFSQARHNNPQNRVRRYVCLKGPDHGGCGRLTVVALPVEELLTDAVLTRLDSPHLANVLAGKASVDADVAALSAQLEADTTRLDELAALYAQGAVTAREWIAARDPITDRITATRRDIAAATDTTNVTELAGTGHLLRGQWDDLDIDRQQTIIKAVLDHAVIAAGTPGARSLDINRVRPHWGV
150851..151822                     PHAGE_Acidia_virus_NC_029316: AAA+ ATPase; Mmcs_5573; phage(gi1002166819)            9.28e-15            MycobacteriumspMCSMREAEVARADLLLDLVEAERRGDRDRFRVLVEAVIAEERANQHHLLADRLSELITTTGQGLVRDDRAAAIRDLVHEVVPNRRLDDLELAPVPRRVVAELIEEQKRAELLRSYGIEPRNRLLLSGPPGNGKTSVAEAIAAELMLPFYVIRYEGVVSSFLGETAARLHNAFEFARTRRCVLFFDELDTIAKERSDAHETGEIKRVVSTLLLQIDGLPAHVLFVGATNHSELLDRAAWRRFQIRAELEPPSRSQATRFLERLAIRLGGDLGFAPRTLADKLAGASYAELEEFALDVRRRAVLELPDSNLKRIVQERLEHRRGQAAE
151897..154431                     hypothetical protein; Mmcs_5574                                                      N/A                 MycobacteriumspMCSMPRLSRPGAGRQGQRLTPQFRELTAAFDAERARLATDTPDEVDPALVVVFDLAGSVKDFRNAINQIDGLEFLSELLGDRTDPDDDFYMTERNVGRTDKPVSHSLYLVMSNARAIDELLRLFTLWQQDPSVSFERGLGKFKDAFQQLTAIRRWGPEDRIRETGLRERWEETLQVVGRSVSTVVVEAELWYRHDAAQRATAESHVAQVITASGGRILDRAQIADIRYHALLAELPIQQVHSVLNDGAESIRLLTTDEVMFVSPFIPMSVTPPTLDPVAAVQLPPGKHIDGLPRIALLDGLPFSNHAVLAGRLVIDDPDRLGENYPLSSRHHGTAMASLIIHGDLSVPGEPLDRPLYVRPIMCPHELAAGSEEVLPNQLFTDLLHRAVRRIVEGESGREPAAPSVRIINLSIGAQARALARRMSPVGRLLDWLAHTYNLLFVVSAGNHLDPITIPADSANDPAVARVAATRAVYDATILRGILPPGDALNVLTVGATHDDGLGEIDIPDTVWDITQPGAPAHYGATGPGVDRSVKPDIHHVGGRALYTRPVAASGRETVEVEIARTAIAGPGVQVAVPGRAGATNTTVFTTGTSNATALVTREASRVFDTLEAAVSGAEDAPLPDGQYHPLLVRALLAHASSWGEWDARLRHELGLDNQQARRQLTALLGYGRVDVNRLGTAATNRAVLVAGGLIARNERHTYELPLPPSLRARAEWHRFTITLAYMAPTVGQLTRYRGAKVYFATPDTGLAGGDRTGAEYNTVRRGSLQHEIIQGTTAMVFGEGDVFPIHVECMDDAQRLRAGNRVRYALVVSVETAEQTSTTIHDEVQARLRDQVRDRARGRVQG
154691..154702                     attL                                                                                 N/A                 GACGCCACATGA
complement(154729..155166)         hypothetical protein; Mmcs_5575                                                      N/A                 MycobacteriumspMCSMAHPNTVNDTPGTVVPDLRNPTTPGDLPLVLALFYLVVDRRTTPLLLDQPEENLDNETIASKLVPAIHEAAGRRQTLVVTHNANLAIVGDADQIVHCQMHDRRFTVSSGSIAELDVAKFALNVLEGTKPAFDNRRHKYEAFPELA
155196..156398                     PHAGE_Paenib_Vegas_NC_028767: transposase; Mmcs_5576; phage(gi971741608)             9.60e-60            MycobacteriumspMCSMTHRKTHDAMTHDHSALLAQLDALKSADVGAVFAELIRAGLQQLIEAEATAAIGAGRYQRTDGRTVHRNGHRPKTVSTTSGDVEVQIPKLRAGSFFPSLLERRRRIDKALHAVIMEAYVHGVSTRSVDDLVFAMGVETGVSKSEVSRICAGLDKEIEAFRTRSLAHTEFPYVFCDATFCKVRIGAHVVSQALVVATGVSIDGTREVLGTAVGDSESFEFWREFLASLRARGLSGVHLVISDAHAGLRAAVAQQFMNSSWQRCRVHFMRNLHTAVAAKHAPAVTAAVKTIFAHTDPMEVAQQWDRVADTLAGSFPKVAAMMAEAKTDVLAFTAFPRAHWQKIWSNNPIVIWSPAVGVVDVRHEASGSLVLLSGRGYLQPSRKQSLRRKSACYTGGFANLVG
156433..157467                     PHAGE_Bacill_1_NC_009737: DNA integration/recombination /inversion; Mmcs_5577; phage(gi155042957)     2.36e-14            MycobacteriumspMCSMAPIERYLRYLTDIERSPNTIKAYAHDLKDWFTFLAGRGPDWTAVQLEDVGAFVSWLRLPMALRQSGIVMLPTMEHHCGEATVNRKLSALAAFYTYAARDGVAVGELLTTWQVGGSRGGWKPFLHHVSNRMPRSRRMVTLKTAKKLPRILTPVEAQAVLDSCDRLRDRFLLAVLYDTGMRVGEALGLRHSDIAAAECEITIRRRDNDNGARAKSVSSRTVPVSPELIRLYADYLHDEYGDLDSDYVFVNLWGRPHGHPWTYAAVYDLVRRLRRRTGIDFDPHWLRHTAATRMLRDGIGLEVVAKLLGHANVTTTAATYGHLTVEDARKVLQQAGWFDGSGQVHL
157512..159677                     PHAGE_Vibrio_X29_NC_024369: integrase family site specific recombinase; Mmcs_5578; phage(gi658311198)     1.29e-06            MycobacteriumspMCSMAGVRNEFRSDVLEFDAEDPVFGGGSCLVDGCERSARGRGLCPGHHQRWSNAGRPALDEFAASTDHRWRKQRPNQCCRARACGYGSARGGLCQLHAQRWERAGRPDLDQWCEDPPPIKKPVPDARCRIEHCSLWPQAQLAFCHTHANTWKANGRPDIEEFASRFASTEIPPNETIVLGSLTPQLKLEMQYVLQFRHDERRGKLTPTIVARVVRLLAQAGVASLLEHDEDAWREHSASLRTDTRSRGLLIYAYRTVVDLAEAGGWEAEYRRDVWRMHRLGFEGRYTLQFNRIPQPWLREPAKRWIRLRLSRGLGLEAGGGRPVLAIARFAQFLAAAGIDRIELIDRALLERYLADLHRELRPQHQGSHTGLLNGFFAAIRQHRWSPDLPATAMFFTEDYPQRGEHLPKALAEHVMTQLEHPDNLDRWDNPTYRLITIILMRCGLRITDALRLRGDCITTDADGAPYLRYFNHKMKRDALVPIDPDLADLIGAQRDRTSQRWPDGTPLLFPRPTKNLNGQLPLAIPTYREALGRWLHACDICDEHGHQVRVTPHQWRHTLGTRLINRDVPQEVVRRILDHDSPQMTAHYARLHDTTVRRAWEAARKVDIHGHTVALDPDGPLAEAAWAKQRLGRATQALPNGYCGLPVQQSCPHANACLTCPMFLTTPEFLPHHRAQRHQTLELITTAEARGQNRLAEMNRQVLGNLDTIIASLDTEAPAHEG
159667..160077                     Tn554 transposase C; Mmcs_5579                                                       N/A                 MycobacteriumspMCSMKADNSIHIATAAKQRHEYTRAKAIAALHELDQAGTAITFEAVADHAGVSRSWLYTQPDLKDEIRRLRSMRQRNPTDPTPSRQRASEESLRQRLDIATRRNRELAEENQRLRRQLAKALGQLRDDNVNPRNHISVR
160236..160418                     PHAGE_Coryne_Poushou_NC_042139: hypothetical protein; Mmcs_5580; phage(gi100031)     2.04e-05            MycobacteriumspMCSMEIFPNPAAFLRLATAVVIESHDEWQVTRRYLSDVSMDELRTVIAAKHAAAALAKQHQIT
complement(160415..161491)         hypothetical protein; Mmcs_5581                                                      N/A                 MycobacteriumspMCSMQRSEEIETTRSNLLTRRSTNEQQQAQLRQRLAAMETIAHSAEVIRTDVIELTRKAEELLGGDDDPFLSLTINTTRYDTWRAATEAALTSLKTEHDVLAHDIETQEQARTENADALAAADSARERARQRVLQSEERVVALIGDENDEESHAGLTSLLHRIKEAPTKLSELREQIVERSRHIHQALDAQLRAVESLYAPASNFIARSEVVKTAGLEFNAELRILPTWRSVSSGLDGRRNGEFLDWLAELPQRVEDTSWGQLAAQLTEALDRLEHERGDTDSELRDPASALRSTTTLDDFLMSMFDLSWLEVRFGLTGDGLPLSQLSPGQRGLVLIASRGVVDFGSGVVHALRSTSRVER
complement(161878..162792)         PHAGE_Burkho_phiE125_NC_003309: putative transposase OrfB; Mmcs_5582; phage(gi17975200)     2.07e-74            MycobacteriumspMCSMLTEHAVPIAPRTFHAWAVRAPSKRALWDATITEILAGYYEPDEHGRRRPESLYGSLKMWAHLQREGIPVAKSTVERLMRKNGWQGVRRQKRVRTTIPDPEAVRPPDLVDRQFGVAAPNVLLVADFTYVKLVTGVFVYVAFVIDAYAGSIVGWEASASKHTRFVESALRQAAALRARQGHPVDGAIHHSDAGSQYTSVRFGETLSLSGIRPSVGSVGDAFDNALAETTIGLYKNECVRADSPFRRGPLNTVGDVEYITADYVAWYNQQRLMHRLGRIPPAEAEARYYSQLVTGRPAGSQKPEGA
complement(162858..163055)         PHAGE_Burkho_phiE125_NC_003309: ISBt3 transposase subunit protein; Mmcs_5583; phage(gi17975201)     1.60e-09            MycobacteriumspMCSMNAETLRNWIRQQQVDDGDRDGVSSEAAAEIRALKRRNAELEQTIEILKAATSFFVRESDPRNRR
complement(163033..164427)         PROPHAGE_Shewan_MR-1: ISSod4, transposase; Mmcs_5584; phage(gi24373869)              4.48e-27            MycobacteriumspMCSMLTVVHDAIEANESTGGAGRSLLDEIVRDGARQMLAAALQAEVAAYVAQFADQLDEKGHRLVVRNGYHQVREVLTAAGAVEVKAPRVNDKRVDPDTGERKRFSSAILPAWARKSPQMSEVLPLLYLHGLSTSDFTPALEQFLGSGAGLSASTITRLTSQWQDEAAAFGRRDLSGSDYVYLWVDGIHLKVRLDQEKLCLLVMLGVRADGRKELVAITDGYRESTESWADLLRDCKRRGMTAPVLAVGDGALGFWKAVREVFPATKEQRCWFHKQANVLAALPKSAHASALSALKEIYNAEDIDKAQVAVKAFTVDFGAKYPKAVAKITDDLDTLLEFYHYPAEHWIHLRTTNPIESTFATVRLRTKVTKGPGSRAAGLAMAYKLIDAAAARWRAVNAPHLVALNHPAFDAHLLPWEGACHAEQVRPGDPSEGGPSGARAPGGLSERVGGDYRGVQTVGDERRDAA
164466..165242                     hypothetical protein; Mmcs_5585                                                      N/A                 MycobacteriumspMCSMIGPSDIQIILGKVRPLSRPLTEAHPQVLIIAHMRLGACQTWMNTTPTLAGLAYAIGEYDRRVYVGLEPPALSRIRKNPERFIERVQVKSEKDDHSLFDHDLPLNSGFVAVVGNKGQGKSALLDCIALGGNSSRSNEFAFLRPSRFLSAPNQKLAREYRTKLVWATGVHRETRLNQSHDRAEPVLVEYLPQMFVELNHPAFDAHLLPWEGACHAEQVRPGDPSEGGPSGARAPGGLSERVGGDYRGVQTVGDERRDAA
165220..165417                     PHAGE_Burkho_phiE125_NC_003309: ISBt3 transposase subunit protein; Mmcs_5586; phage(gi17975201)     1.60e-09            MycobacteriumspMCSMNAETLRNWIRQQQVDDGDRDGVSSEAAAEIRALKRRNAELEQTIEILKAATSFFVRESDPRNRR
165483..166397                     PHAGE_Burkho_phiE125_NC_003309: putative transposase OrfB; Mmcs_5587; phage(gi17975200)     2.07e-74            MycobacteriumspMCSMLTEHAVPIAPRTFHAWAVRAPSKRALWDATITEILAGYYEPDEHGRRRPESLYGSLKMWAHLQREGIPVAKSTVERLMRKNGWQGVRRQKRVRTTIPDPEAVRPPDLVDRQFGVAAPNVLLVADFTYVKLVTGVFVYVAFVIDAYAGSIVGWEASASKHTRFVESALRQAAALRARQGHPVDGAIHHSDAGSQYTSVRFGETLSLSGIRPSVGSVGDAFDNALAETTIGLYKNECVRADSPFRRGPLNTVGDVEYITADYVAWYNQQRLMHRLGRIPPAEAEARYYSQLVTGRPAGSQKPEGA
complement(166474..166791)         ATPase involved in DNA repair; Mmcs_5588                                             N/A                 MycobacteriumspMCSMLGVGKTEWRDIKWNDQSIAAKKNVINSAQFIFSAYEDTARWRDDVSDLRKSKVTHQLLDCSDAHYFSDSDQHMRRGIVNTCGSACFRRPPFRLADRRLRAVSVG
complement(166960..167787)         PROPHAGE_Xantho_33913: ISxac3 transposase; Mmcs_5589; phage(gi21231086)              3.85e-44            MycobacteriumspMCSMAVTCRVLKLARQPYYRWRAHPVTDAEIVEAYRANALFDAHKDDPEFGYRYLVEEARDAGEPMAERTAWRICSQQGLWSVFGKKRGKNGKPGPPVHDDLVERDFTASEPNALWLSDITEHRTGEGKLYLCAIKDVFSNRIVGYSIDSRMKSRLATAALSSAVARRGDVDGCILHSDRGSQFRSRKFVHALHHHGMVGSMGRVGAAGDNAAMESFFSLLQKNVLDRRRWDTREQLRIAIVIWIERTYHRRRRQLTLGRLTPIEFEAIMTTPASQAA
complement(167814..168122)         PHAGE_Burkho_phiE125_NC_003309: ISBt3 transposase subunit protein; Mmcs_5590; phage(gi17975201)     3.30e-09            MycobacteriumspMCSMPRPYPREFRDDVVRVACNRGDGVTIEQIATDFGVHPMTLTKWMRQADIDEGTKPGKSTSDSAELRELRRRNRLLEQENEILRRAAAYLSQANLPGKGSTRS
complement(168174..168767)         plasmid replication initiator protein; Mmcs_5591                                     N/A                 MycobacteriumspMCSMNSSTTSAQLVLPGVPDTVDTARVVEQMVRRAASMGYESWWRRAESVGFCAHPIQLIGADEYGRQRVVWTRCNNRRAHICPSCSDLYARDTWQLVHAGAAGGHHGMPTTVGSHPQVFLTLTAPSFGAVHTATMSQDKTAQVCRDQHRIGGYRRCPHGKPLWCNTTHDYSAPLVGQPLCPECYDYAGHVLFTWGLLHD
complement(168760..170202)         PHAGE_Bacill_1_NC_009737: FtsK/SpoIIIE family protein; Mmcs_5592; phage(gi158348423)     4.44e-11            MycobacteriumspMCSMTSKKNTTNNGPDNNDWFAELVVSLFTAAGYVLWWAVLFPAISLPIIASLVLAISHGPRVGLICAIVCSAAYAVWAWLQPGSFRAWVTEPVRRRWLTWSRYARTWESTCTLHGLTNTLSGRTLTPALRAVTIGKTTDVLAVRIVTGQSVADWHKQSDALAAAWRADRIGITATSPGELRITLMRADVLAEPIALPMPTPATPVDLVSVRVGITEMRHWWQVPLLGHHVLIAGATGAGKGSVLWSLIAGIAPAVKTGLVRLCVIDPKGGMELGAGAPMFTVFTHDATDTTLELLRQLATVMHARANRLRGHTRLHTPTTSEPLFVVVIDEIAALTAYVTDRKVRTEIEQLLGLLLSQGRAVGISVVAAVQDPAKDTLPVRQLFTVRIGLRLTEATQTTMVLGQGARDAGAECDRIPDATPGVGYMMVDGTAQAQRVRAFHVTDHDITALATRFRRPARRPNNNHQPRSTDTGHTAGEGSGE
183300..183311                     attR                                                                                 N/A                 GACGCCACATGA
