gi|111017022|ref|NC_008268.1|  Rhodococcus jostii RHA1, complete genome. 7804765, gc%: 67.52%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
7055617..7055628                   attL                                                                                 N/A                 CGGCGAGCACGT
7055865..7057607                   PHAGE_Mycoba_Severus_NC_021307: integrase, s-int; RHA1_ro06554; phage(gi508179854)     3.83e-146           RhodococcusjostiiRHA1MDPQHKPTRALIVIRLSRLTDETTSPERQLEACERFCAARGWEVVGVAEDLDVSAGTTSPFERPSLSQWIGDGKDNPGRIGEFDTVVFYRVDRLVRRVRHLHDVIAWSERFDVNMVSATESHFDLSTTIGALIAQLVASFAEMELEGISQRATSAHRHNVQLGKFVGGSPPFGYMPEETPDGWRLVHDPDVVPIILEVVDRVLEGEPLRRITDDLNARGATTARDLVKQRKGKETEGHKWHSNVLKRRLMSPAMLGYALRREPLTDSKGKPKLSAKGAKLYGPEEIVRGPDGLPVQRAEPILPKPLFDRVVAELEARELQKEPTKRINSMLLRVLYCGVCGQPVYRAKGQGGRSDRYRCRSIQDGANCGNPSVLTYELDDLVEESILVLMGDSERLAHVWNPGEDNASELAEVEARLADRTGLIGVGAYKAGTPQRATLDTLIEADAKLYERLKAATPRPAGWTWEPTGETFAEWWAALDTGARNVYLRNMGVRVTYDKRPVPEQVSAGEKPRVHLELGEVRKMAEQVAVTGTIGTLTRNYTRLGEIGITHVDIDAGSGKAVFVTKSGERFELPLNIPEE
7058836..7059144                   hypothetical protein; RHA1_ro06555                                                   N/A                 RhodococcusjostiiRHA1MMRCGRCRPCLTRPDHELPGTQPGTALPRWQEQSRPGGEPTTRVVGHTTSPRRDAHMKDTFDRLPASWRREIRILRTDCKMYRLRLRAAEQRIAELEASRNV
7059137..7059994                   PHAGE_Lactob_LL_H_NC_009554: putative dnaA analog; RHA1_ro06556; phage(gi148750873)     5.90e-06            RhodococcusjostiiRHA1MSSRNIVRHHGLVGDKRGAHAPGGGFLYAGIPMALARDTKLSAHARSVALLAWSHDEKWQQSAADIAKELGMGRNTVAAALIELEERGWMVREVHYKPGKKVAQVWDFEIWHLQMSNIPFAPDEVERLRQPAPNGSRSTTEPAPNGSRGCSEREQVPAPNRSTIGIDREMHPEMHLSNASTDQETGHGSRSLAVAGPEPTAEDRPAKSRQADPDPEPASAGASEAPEEYRPTGLHPLAQPTLSADPFASEPAWRVEAVASEKRAARLLVPVAASAPHRIPDPFAS
7060320..7060535                   hypothetical protein; RHA1_ro06557                                                   N/A                 RhodococcusjostiiRHA1MSRYERPATFEAWWERHGQQYEAAVIEGGGTPWPLDPEKRAETAKRLGLPDDTNPMTLREALWMRRNRKAA
7060532..7061029                   hypothetical protein; RHA1_ro06558                                                   N/A                 RhodococcusjostiiRHA1MTTSETTTSIPGAESNADGVSTDSDTDTPEAPNEPQKGNKEARYRVERNEAREELVTANARIERMQRAEVERLATEAGLSHGSDVFTLSGNGPADYLDDHGNVDSAKVAADVAAVLEERPGLRKNAPAFDPTQGTGGGKPKAAAPSWESMFSGSGATPNLYFVGS
7061179..7062006                   PHAGE_Pseudo_PPpW_3_NC_023006: putative major capsid protein and peptidase U35; RHA1_ro06559; phage(gi564292486)     9.44e-07            RhodococcusjostiiRHA1MAVLNSGLENAFTPEDYGKLIDTEVDAKSVAFQAATVVNTDKHQIRVPILVSDPSTGWFAENTEITLVDPETDELVIVPTKVAGRTQISNEAADDTDPAAASIIGKALARDIANKTDAAFFGNTVTNGPSGLLSVSGVQVVDTGAGWTTLDYVHDAKSEALANGAELTHIVLAPDVALALAKAKTATGSNQGLLETVDDGVKLAGLIALVSPYVTAGNAWALDSSQVLTVRRKGTTLATSKDAAFGSDATQIRAVSRVGFGFANPAGIVRLHDAA
7062193..7062447                   hypothetical protein; RHA1_ro06560                                                   N/A                 RhodococcusjostiiRHA1MTSAVGQNCSYLCRAIAQELENTQRTCEYIGDTPLTTELWTEAVALSDACSRYLELGYQLRIKAMEVGISPKQWQEIRKGRAGR
7062466..7062792                   PHAGE_Mycoba_Turbido_NC_023707: gp4; RHA1_ro06561; phage(gi593776044)                4.00e-31            RhodococcusjostiiRHA1MTRGPEVSSWDDKIASQAQAIEPMDDFEAIPLEGPGRWAHPYEGVTLYTNDDNILFPESDGTPAANGARSLLLQALDKAFQAGESATSAFDRLRNGAPVTTGDLSELA
7063247..7063543                   PHAGE_Mycoba_Bernal13_NC_024135: terminase small subunit; RHA1_ro06562; phage(gi640883689)     1.28e-19            RhodococcusjostiiRHA1MRPRMPKGFGSAGQKLWRTVLDEYELDNEPAKLEILAHACRVSDTIAELDRATADQPLTVRGSAGQMVIHPLISEVRFQRALLAQLLARLNFAPAEED
7063561..7063953                   hypothetical protein; RHA1_ro06563                                                   N/A                 RhodococcusjostiiRHA1MSPTRRRNRKPSATSPEALAALLPNDLRSLEGLYTPGDYQAMRRQVVDWLNHAAPGHDHKLPPAVMNAAGCSAADYYRHALSMPVGIYEWAAPPPPVIEKPYEPTQEDLDLQAARAERLRRSQKRVFVTR
7064024..7064428                   PHAGE_Mycoba_Serenity_NC_028932: head-to-tail connector protein; RHA1_ro06564; phage(gi971757169)     7.12e-65            RhodococcusjostiiRHA1MAYAVAADVTTLWAKEPEPEVMALIERRLEQVERMIIRRIPDLADRITAGSIDQADVVDIEADAVLRVVRNPEGYLSETDGGYTYQLQSDLSSGKLTITDEEWEILGVNSVSRMAVIVPNLTTPQPNVAFAMGG
7064428..7064703                   PHAGE_Mycoba_Benedict_NC_042331: hypothetical protein; RHA1_ro06565; phage(gi100016)     2.18e-12            RhodococcusjostiiRHA1MSRRTDLVTVYPETVVIDDDGNTLTRPGAVGVLTRAVVQTDDSTPSKHRLRLVGYPGQLAAQSAVEWNGQRYMIDGGSPRTAQAEYVMIRK
complement(7064767..7065090)       PHAGE_Strept_BillNye_NC_042105: hypothetical protein; RHA1_ro06566; phage(gi100055)     2.57e-12            RhodococcusjostiiRHA1MSVPGRATVTTAEYRRYINSPEWRRTRERYWSSKLPTDCYCCGRPRHPGMHLHHRTYKNLGAERLMDLVPVCAECHDEIHRLHRGDPRWKSKGLWYVTKHVRKTKRP
7072621..7072632                   attR                                                                                 N/A                 CGGCGAGCACGT
