gi|00000000|ref|NC_009089.1|  Clostridioides difficile 630, complete genome. 4290252, gc%: 29.06%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
1088001..1088023                   attL                                                                                 N/A                 GGAACTATTCCAAAGTATAATAA
complement(1088175..1089293)       PHAGE_Clostr_CDMH1_NC_024144: putative integrase protein; CD630_09040; phage(gi640884898)     0.0                 [Clostridioidesdifficile630]
complement(1089801..1091465)       PHAGE_Clostr_CDMH1_NC_024144: putative regulatory protein; CD630_09050; phage(gi640884899)     0.0                 [Clostridioidesdifficile630]
complement(1091736..1093184)       DNA-binding protein; CD630_09060                                                     N/A                 [Clostridioidesdifficile630]
complement(1093832..1094164)       PHAGE_Clostr_phiCD119_NC_007917: RepR; putative repressor; CD630_09070; phage(gi90592681)     1.13e-19            [Clostridioidesdifficile630]
1094326..1094514                   PHAGE_Lactob_c5_NC_019449: putative Cro-like repressor; CD630_09071; phage(gi418488172)     2.45e-06            [Clostridioidesdifficile630]
1094548..1095342                   PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; CD630_09080; phage(gi640884902)     6.32e-166           [Clostridioidesdifficile630]
1095404..1095604                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09090; phage(gi640884907)     9.85e-36            [Clostridioidesdifficile630]
complement(1095643..1096269)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09100; phage(gi640884908)     1.72e-147           [Clostridioidesdifficile630]
1096282..1096479                   PHAGE_Clostr_CDMH1_NC_024144: putative regulatory protein; CD630_09110; phage(gi640884909)     3.69e-38            [Clostridioidesdifficile630]
1096496..1096825                   PHAGE_Clostr_CDMH1_NC_024144: putative DNA binding protein; CD630_09120; phage(gi640884910)     6.72e-71            [Clostridioidesdifficile630]
1096927..1097115                   PHAGE_Clostr_CDMH1_NC_024144: consaerved hypothetical protein; CD630_09130; phage(gi640884911)     6.61e-21            [Clostridioidesdifficile630]
1097125..1097343                   PHAGE_Clostr_phiCD505_NC_028764: hypothetical protein; CD630_09140; phage(gi971819885)     4.33e-34            [Clostridioidesdifficile630]
1097442..1097684                   PHAGE_Clostr_phiCD505_NC_028764: hypothetical protein; CD630_09150; phage(gi971819886)     3.08e-50            [Clostridioidesdifficile630]
1097768..1098283                   PHAGE_Clostr_CDMH1_NC_024144: conserved hypothetical protein (Gp157-like); CD630_09160; phage(gi640884913)     1.82e-110           [Clostridioidesdifficile630]
1098285..1099187                   PHAGE_Lister_B054_NC_009813: gp50; CD630_09170; phage(gi157325334)                   4.43e-50            [Clostridioidesdifficile630]
1099200..1100039                   PHAGE_Clostr_phiCD505_NC_028764: hypothetical protein; CD630_09180; phage(gi971819889)     2.33e-111           [Clostridioidesdifficile630]
1100110..1100364                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09190; phage(gi640884918)     1.18e-56            [Clostridioidesdifficile630]
1100438..1100701                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09200; phage(gi640884919)     1.43e-51            [Clostridioidesdifficile630]
1100713..1101063                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09210; phage(gi640884920)     1.24e-70            [Clostridioidesdifficile630]
1101067..1101447                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09220; phage(gi640884921)     7.15e-83            [Clostridioidesdifficile630]
1101431..1101577                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09230; phage(gi640884922)     9.72e-27            [Clostridioidesdifficile630]
1101552..1101710                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09231; phage(gi640884923)     2.67e-16            [Clostridioidesdifficile630]
1101707..1101880                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09240; phage(gi640884924)     1.18e-34            [Clostridioidesdifficile630]
1101880..1102005                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09241; phage(gi640884925)     1.01e-21            [Clostridioidesdifficile630]
1101998..1102333                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09250; phage(gi640884926)     4.51e-74            [Clostridioidesdifficile630]
1102433..1102708                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09260; phage(gi640884927)     4.24e-56            [Clostridioidesdifficile630]
1102804..1103877                   PHAGE_Clostr_CDMH1_NC_024144: putative DNA methylase protein; CD630_09270; phage(gi640884928)     0.0                 [Clostridioidesdifficile630]
1103957..1104166                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09280; phage(gi640884929)     4.97e-25            [Clostridioidesdifficile630]
1104178..1105173                   PHAGE_Clostr_phiMMP03_NC_028959: hypothetical protein; CD630_09290; phage(gi971820288)     0.0                 [Clostridioidesdifficile630]
1105182..1105907                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_09300; phage(gi90592700)     3.72e-169           [Clostridioidesdifficile630]
1105904..1106077                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09301; phage(gi640884932)     1.21e-20            [Clostridioidesdifficile630]
1106070..1106441                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_09310; phage(gi90592702)     1.89e-83            [Clostridioidesdifficile630]
1106444..1106911                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_09320; phage(gi90592703)     8.48e-109           [Clostridioidesdifficile630]
1106990..1107175                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_09330; phage(gi90592704)     2.81e-37            [Clostridioidesdifficile630]
1107180..1107428                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_09340; phage(gi90592705)     6.40e-53            [Clostridioidesdifficile630]
1107447..1107560                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09341; phage(gi640884935)     6.62e-11            [Clostridioidesdifficile630]
1107557..1108363                   PHAGE_Clostr_phiCD119_NC_007917: methyltransferase; CD630_09350; phage(gi90592706)     0.0                 [Clostridioidesdifficile630]
1108377..1108784                   PHAGE_Clostr_CDMH1_NC_024144: putative endodeoxyribonuclease protein; CD630_09360; phage(gi640884936)     2.29e-82            [Clostridioidesdifficile630]
1108799..1109524                   PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; CD630_09370; phage(gi640884937)     4.60e-174           [Clostridioidesdifficile630]
1109618..1110106                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09380; phage(gi640884938)     5.38e-113           [Clostridioidesdifficile630]
1110833..1111027                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_09390; phage(gi90592710)     1.96e-38            [Clostridioidesdifficile630]
1111060..1111638                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_09400; phage(gi90592711)     1.02e-135           [Clostridioidesdifficile630]
complement(1111883..1112200)       PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CD630_09410; phage(gi971820042)     4.48e-72            [Clostridioidesdifficile630]
1112324..1112551                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CD630_09420; phage(gi971820043)     1.36e-45            [Clostridioidesdifficile630]
1112621..1113313                   PHAGE_Clostr_CDMH1_NC_024144: putative phage terminase small subunit; CD630_09430; phage(gi640884858)     1.40e-135           [Clostridioidesdifficile630]
1113303..1114544                   PHAGE_Clostr_CDMH1_NC_024144: putative phage terminase large subunit; CD630_09440; phage(gi640884859)     0.0                 [Clostridioidesdifficile630]
1114550..1115989                   PHAGE_Clostr_CDMH1_NC_024144: putative phage portal protein; CD630_09450; phage(gi640884860)     0.0                 [Clostridioidesdifficile630]
1115979..1117472                   PHAGE_Clostr_CDMH1_NC_024144: putative minor head protein; CD630_09460; phage(gi640884861)     0.0                 [Clostridioidesdifficile630]
1117450..1117680                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09461; phage(gi640884862)     3.21e-47            [Clostridioidesdifficile630]
1117990..1118553                   PHAGE_Clostr_CDMH1_NC_024144: putative minor structural protein; CD630_09470; phage(gi640884864)     1.22e-130           [Clostridioidesdifficile630]
1118565..1119464                   PHAGE_Clostr_CDMH1_NC_024144: putative major capsid protein; CD630_09480; phage(gi640884865)     0.0                 [Clostridioidesdifficile630]
1119464..1119697                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CD630_09490; phage(gi971819970)     1.80e-46            [Clostridioidesdifficile630]
1119698..1120108                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09500; phage(gi640884866)     2.99e-91            [Clostridioidesdifficile630]
1120102..1120449                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09510; phage(gi640884867)     1.13e-78            [Clostridioidesdifficile630]
1120449..1120874                   PHAGE_Clostr_CDMH1_NC_024144: putative tail protein; CD630_09520; phage(gi640884868)     2.05e-98            [Clostridioidesdifficile630]
1120867..1121304                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09530; phage(gi640884869)     5.86e-96            [Clostridioidesdifficile630]
1121297..1121473                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09531; phage(gi640884870)     2.74e-27            [Clostridioidesdifficile630]
1121475..1122785                   PHAGE_Clostr_CDMH1_NC_024144: putative tail sheath protein; CD630_09540; phage(gi640884871)     0.0                 [Clostridioidesdifficile630]
1122802..1123272                   PHAGE_Clostr_CDMH1_NC_024144: putative core tail protein; CD630_09550; phage(gi640884872)     5.85e-95            [Clostridioidesdifficile630]
1123344..1123784                   PHAGE_Clostr_CDMH1_NC_024144: conserved hypothetical protein (XkdN-like); CD630_09560; phage(gi640884874)     1.68e-64            [Clostridioidesdifficile630]
1123784..1123978                   PHAGE_Strept_EJ_1_NC_005294: hypothetical protein; CD630_09561; phage(gi39653729)     5.87e-08            [Clostridioidesdifficile630]
1124125..1124286                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09562; phage(gi640884875)     7.61e-18            [Clostridioidesdifficile630]
1125950..1126510                   PHAGE_Clostr_phiCT9441A_NC_029022: lipoprotein; CD630_09570; phage(gi971821698)      1.65e-15            [Clostridioidesdifficile630]
1126554..1127123                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CD630_09580; phage(gi971819983)     2.60e-46            [Clostridioidesdifficile630]
1127194..1129545                   PHAGE_Clostr_CDMH1_NC_024144: putative tape measure protein; CD630_09590; phage(gi640884879)     0.0                 [Clostridioidesdifficile630]
1129561..1130250                   PHAGE_Clostr_CDMH1_NC_024144: putative cell wall hydrolase/LysM protein; CD630_09600; phage(gi640884880)     1.59e-157           [Clostridioidesdifficile630]
1130243..1132213                   PHAGE_Clostr_CDMH1_NC_024144: putative cell wall hydrolase protein; CD630_09610; phage(gi640884881)     0.0                 [Clostridioidesdifficile630]
1132227..1132487                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09620; phage(gi640884882)     7.30e-53            [Clostridioidesdifficile630]
1132492..1132911                   PHAGE_Clostr_CDMH1_NC_024144: conserved hypothetical protein (XkdS-like); CD630_09630; phage(gi640884883)     4.97e-95            [Clostridioidesdifficile630]
1132912..1133961                   PHAGE_Clostr_CDMH1_NC_024144: putative baseplate-J protein; CD630_09640; phage(gi640884884)     0.0                 [Clostridioidesdifficile630]
1133954..1134571                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09650; phage(gi640884885)     2.57e-142           [Clostridioidesdifficile630]
1134583..1135386                   PHAGE_Clostr_CDMH1_NC_024144: putative tail fiber protein; CD630_09660; phage(gi640884886)     0.0                 [Clostridioidesdifficile630]
1135395..1137101                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09670; phage(gi640884887)     0.0                 [Clostridioidesdifficile630]
1137118..1137411                   PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_09680; phage(gi640884888)     1.47e-59            [Clostridioidesdifficile630]
1137411..1137593                   PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; CD630_09690; phage(gi971763899)     1.02e-32            [Clostridioidesdifficile630]
1137628..1137858                   PHAGE_Clostr_phiCD481_1_NC_028951: hypothetical protein; CD630_09700; phage(gi971820125)     1.46e-47            [Clostridioidesdifficile630]
1137878..1138138                   PHAGE_Clostr_phiCDHM11_NC_029001: putative holin protein; CD630_09710; phage(gi971764687)     1.28e-53            [Clostridioidesdifficile630]
1138135..1138950                   PHAGE_Clostr_phiCD119_NC_007917: putative lysin; CD630_09720; phage(gi90592671)      0.0                 [Clostridioidesdifficile630]
1138967..1139263                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_09730; phage(gi90592672)     1.02e-64            [Clostridioidesdifficile630]
1139776..1140372                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_09750; phage(gi90592673)     1.72e-135           [Clostridioidesdifficile630]
1140390..1140821                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_09760; phage(gi90592674)     4.51e-99            [Clostridioidesdifficile630]
1140823..1141527                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_09770; phage(gi90592676)     9.27e-93            [Clostridioidesdifficile630]
complement(1141775..1141963)       PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CD630_09772; phage(gi414090402)     1.08e-36            [Clostridioidesdifficile630]
1142224..1142367                   PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CD630_09771; phage(gi414090403)     3.43e-25            [Clostridioidesdifficile630]
1143302..1143688                   PHAGE_Clostr_CDMH1_NC_024144: putative regulatory protein; CD630_09790; phage(gi640884897)     5.63e-87            [Clostridioidesdifficile630]
1143874..1143896                   attR                                                                                 N/A                 GGAACTATTCCAAAGTATAATAA

#### region 2 ####
1413527..1413539                   attL                                                                                 N/A                 AATAAATATAAAA
1413722..1413733                   attL                                                                                 N/A                 AAATATAGTATT
1419691..1420605                   PHAGE_Thermu_P2345_NC_009803: XerD-like integrase; CD630_12220; phage(gi157265299)     4.84e-13            [Clostridioidesdifficile630]
1420647..1421819                   phosphopentomutase; CD630_12230                                                      N/A                 [Clostridioidesdifficile630]
1421866..1422678                   purine nucleoside phosphorylase; CD630_12240                                         N/A                 [Clostridioidesdifficile630]
1422867..1424207                   PHAGE_Geobac_E3_NC_029073: putative pyrimidine nucleoside phosphorylase; CD630_12250; phage(gi985758391)     4.24e-167           [Clostridioidesdifficile630]
1424420..1425499                   aminodeoxychorismate lyase; CD630_12260                                              N/A                 [Clostridioidesdifficile630]
1425671..1426345                   PHAGE_Mycoba_Papyrus_NC_022053: Mdmc O-methyltransferase; CD630_12270; phage(gi530545246)     6.65e-15            [Clostridioidesdifficile630]
1426332..1427579                   U32 family peptidase; CD630_12280                                                    N/A                 [Clostridioidesdifficile630]
1427651..1429315                   peptidoglycan glycosyltransferase; CD630_12290                                       N/A                 [Clostridioidesdifficile630]
1429402..1429413                   attR                                                                                 N/A                 AAATATAGTATT
complement(1429412..1444739)       PHAGE_Bacill_Grass_NC_022771: RNA polymerase sigma-70 factor; CD630_12300; phage(gi568191747)     4.26e-20            [Clostridioidesdifficile630]
complement(1429719..1431236)       PHAGE_Thermo_THSA_485A_NC_018264: Recombinase; CD630_12310; phage(gi397912662)       3.34e-179           [Clostridioidesdifficile630]
complement(1431361..1432182)       lipoprotein; CD630_12320                                                             N/A                 [Clostridioidesdifficile630]
1432373..1433800                   PHAGE_Clostr_phiCD211_NC_029048: Cell surface protein (fragment); CD630_12330; phage(gi981220894)     7.54e-89            [Clostridioidesdifficile630]
1433950..1434102                   PHAGE_Clostr_phiCD38_2_NC_015568: hypothetical protein; CD630_12331; phage(gi333798140)     4.38e-11            [Clostridioidesdifficile630]
1436823..1436978                   PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; CD630_12333; phage(gi640884902)     2.08e-05            [Clostridioidesdifficile630]
1437003..1437104                   PHAGE_Paenib_Vegas_NC_028767: DNA-binding anti-repressor; CD630_12334; phage(gi971741623)     5.72e-08            [Clostridioidesdifficile630]
1437224..1437475                   hypothetical protein; CD630_12340                                                    N/A                 [Clostridioidesdifficile630]
1437796..1437909                   hypothetical protein; CD630_12341                                                    N/A                 [Clostridioidesdifficile630]
complement(1438696..1439079)       hypothetical protein; CD630_12350                                                    N/A                 [Clostridioidesdifficile630]
complement(1440754..1440873)       hypothetical protein; CD630_12371                                                    N/A                 [Clostridioidesdifficile630]
complement(1440934..1441251)       hypothetical protein; CD630_12380                                                    N/A                 [Clostridioidesdifficile630]
1442312..1442701                   PHAGE_Clostr_phiMMP02_NC_019421: regulatory protein; CD630_12390; phage(gi414090405)     2.41e-29            [Clostridioidesdifficile630]
1443026..1443535                   teicoplanin resistance protein; CD630_12400                                          N/A                 [Clostridioidesdifficile630]
complement(1443637..1443831)       PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CD630_12401; phage(gi414090402)     9.82e-08            [Clostridioidesdifficile630]
1444975..1444987                   attR                                                                                 N/A                 AATAAATATAAAA

#### region 3 ####
1571945..1572145                   PHAGE_Lactoc_bIL312_NC_002671: Csp; CD630_13550; phage(gi13095918)                   6.83e-21            [Clostridioidesdifficile630]
1572566..1572994                   CBS domain-containing protein; CD630_13560                                           N/A                 [Clostridioidesdifficile630]
complement(1573137..1573892)       peptidyl-prolyl isomerase; CD630_13570                                               N/A                 [Clostridioidesdifficile630]
complement(1574013..1574429)       membrane protein; CD630_13580                                                        N/A                 [Clostridioidesdifficile630]
complement(1574593..1575099)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CD630_13590; phage(gi209901280)     1.31e-09            [Clostridioidesdifficile630]
complement(1575181..1575501)       PHAGE_Clostr_CDMH1_NC_024144: putative repressor protein; CD630_13600; phage(gi640884900)     3.19e-17            [Clostridioidesdifficile630]
1575670..1575867                   PHAGE_Brevib_Jimmer1_NC_029104: XRE family transcriptional regulator; CD630_13601; phage(gi985760854)     1.12e-09            [Clostridioidesdifficile630]
1575972..1576412                   PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CD630_13610; phage(gi209901307)     2.43e-40            [Clostridioidesdifficile630]
1576661..1577104                   PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_13620; phage(gi90592649)     2.98e-22            [Clostridioidesdifficile630]
1577109..1578173                   PHAGE_Clostr_phiCDHM19_NC_028996: putative tail sheath protein; CD630_13630; phage(gi971763880)     2.73e-112           [Clostridioidesdifficile630]
1578187..1578615                   PHAGE_Clostr_phiCDHM19_NC_028996: putative tail core protein; CD630_13640; phage(gi971763881)     6.39e-40            [Clostridioidesdifficile630]
1578741..1579187                   PHAGE_Clostr_phiCTC2B_NC_030951: hypothetical protein; CD630_13650; phage(gi100045)     5.62e-17            [Clostridioidesdifficile630]
1579214..1579381                   PHAGE_Clostr_phiCDHM19_NC_028996: hypothetical protein; CD630_13651; phage(gi971763883)     8.14e-05            [Clostridioidesdifficile630]
1579381..1581834                   PHAGE_Clostr_phiCD481_1_NC_028951: hypothetical protein; CD630_13660; phage(gi971820114)     8.52e-14            [Clostridioidesdifficile630]
1581834..1582256                   PHAGE_Clostr_phiCD481_1_NC_028951: LysM domain protein; CD630_13670; phage(gi971820115)     3.28e-61            [Clostridioidesdifficile630]
1582538..1584067                   PHAGE_Clostr_phiCD481_1_NC_028951: NlpC/P60 family protein; CD630_13680; phage(gi971820116)     0.0                 [Clostridioidesdifficile630]
1584083..1584409                   PHAGE_Clostr_phiCD481_1_NC_028951: hypothetical protein; CD630_13690; phage(gi971820117)     4.81e-65            [Clostridioidesdifficile630]
1584409..1584837                   PHAGE_Clostr_phiCD481_1_NC_028951: Phage protein XkdS; CD630_13700; phage(gi971820118)     2.28e-83            [Clostridioidesdifficile630]
1584830..1585882                   PHAGE_Clostr_phiCD481_1_NC_028951: XkdT protein; CD630_13710; phage(gi971820119)     9.01e-180           [Clostridioidesdifficile630]
1585879..1586577                   PHAGE_Clostr_phiCD481_1_NC_028951: hypothetical protein; CD630_13720; phage(gi971820120)     1.33e-66            [Clostridioidesdifficile630]
1586578..1587564                   PHAGE_Clostr_phiCD481_1_NC_028951: putative phage tail fiber protein; CD630_13730; phage(gi971820121)     3.44e-58            [Clostridioidesdifficile630]
1587586..1592817                   PHAGE_Clostr_phiCD211_NC_029048: hypothetical protein; CD630_13740; phage(gi981220878)     4.02e-176           [Clostridioidesdifficile630]
1593450..1593710                   PHAGE_Clostr_phiCD111_NC_028905: putative holin; CD630_13760; phage(gi971820067)     2.15e-48            [Clostridioidesdifficile630]
complement(1593918..1594373)       hypothetical protein; CD630_13770                                                    N/A                 [Clostridioidesdifficile630]
complement(1594601..1595020)       PHAGE_Brevib_Abouo_NC_029029: transcriptional regulator; CD630_13780; phage(gi971767216)     2.80e-10            [Clostridioidesdifficile630]
1595319..1595528                   PHAGE_Bacill_BCJA1c_NC_006557: cro; CD630_13781; phage(gi56694875)                   1.21e-10            [Clostridioidesdifficile630]
1595548..1595769                   hypothetical protein; CD630_13782                                                    N/A                 [Clostridioidesdifficile630]
complement(1595986..1596384)       PHAGE_Paenib_Vegas_NC_028767: helix-turn-helix family domain XRE family transcriptional regulator; CD630_13790; phage(gi971741618)     2.42e-09            [Clostridioidesdifficile630]
complement(1596805..1599297)       PHAGE_Mycoba_Enkosi_NC_028936: transporter-like protein; CD630_13800; phage(gi971757643)     5.34e-11            [Clostridioidesdifficile630]

#### region 4 ####
3367045..3367056                   attL                                                                                 N/A                 GATTTATTAAAA
3368193..3368204                   attL                                                                                 N/A                 AGGTTTTCTTAT
complement(3380278..3380421)       PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CD630_28890; phage(gi414090403)     1.91e-26            [Clostridioidesdifficile630]
complement(3381114..3381818)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_28900; phage(gi90592676)     4.31e-92            [Clostridioidesdifficile630]
complement(3381820..3382251)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_28910; phage(gi90592674)     4.51e-99            [Clostridioidesdifficile630]
complement(3382269..3382865)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_28920; phage(gi90592673)     1.72e-135           [Clostridioidesdifficile630]
complement(3383378..3383674)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_28930; phage(gi90592672)     1.02e-64            [Clostridioidesdifficile630]
complement(3383691..3384506)       PHAGE_Clostr_phiCD119_NC_007917: putative lysin; CD630_28940; phage(gi90592671)      0.0                 [Clostridioidesdifficile630]
complement(3384503..3384763)       PHAGE_Clostr_phiCDHM11_NC_029001: putative holin protein; CD630_28941; phage(gi971764687)     1.28e-53            [Clostridioidesdifficile630]
complement(3384783..3385013)       PHAGE_Clostr_phiCD481_1_NC_028951: hypothetical protein; CD630_28950; phage(gi971820125)     1.46e-47            [Clostridioidesdifficile630]
complement(3385230..3385523)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_28960; phage(gi640884888)     1.47e-59            [Clostridioidesdifficile630]
complement(3385540..3387246)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_28970; phage(gi640884887)     0.0                 [Clostridioidesdifficile630]
complement(3387255..3388058)       PHAGE_Clostr_CDMH1_NC_024144: putative tail fiber protein; CD630_28980; phage(gi640884886)     0.0                 [Clostridioidesdifficile630]
complement(3388070..3388687)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_28990; phage(gi640884885)     2.57e-142           [Clostridioidesdifficile630]
complement(3388680..3389729)       PHAGE_Clostr_CDMH1_NC_024144: putative baseplate-J protein; CD630_29000; phage(gi640884884)     0.0                 [Clostridioidesdifficile630]
complement(3389730..3390149)       PHAGE_Clostr_CDMH1_NC_024144: conserved hypothetical protein (XkdS-like); CD630_29010; phage(gi640884883)     4.97e-95            [Clostridioidesdifficile630]
complement(3390154..3390414)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29020; phage(gi640884882)     7.30e-53            [Clostridioidesdifficile630]
complement(3390428..3392398)       PHAGE_Clostr_CDMH1_NC_024144: putative cell wall hydrolase protein; CD630_29030; phage(gi640884881)     0.0                 [Clostridioidesdifficile630]
complement(3392391..3393080)       PHAGE_Clostr_CDMH1_NC_024144: putative cell wall hydrolase/LysM protein; CD630_29040; phage(gi640884880)     1.59e-157           [Clostridioidesdifficile630]
complement(3393096..3395447)       PHAGE_Clostr_CDMH1_NC_024144: putative tape measure protein; CD630_29050; phage(gi640884879)     0.0                 [Clostridioidesdifficile630]
complement(3395518..3396087)       PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CD630_29060; phage(gi971819983)     2.60e-46            [Clostridioidesdifficile630]
complement(3396131..3396691)       PHAGE_Clostr_phiCT9441A_NC_029022: lipoprotein; CD630_29070; phage(gi971821698)      1.65e-15            [Clostridioidesdifficile630]
complement(3398355..3398516)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29071; phage(gi640884875)     7.61e-18            [Clostridioidesdifficile630]
complement(3398857..3399297)       PHAGE_Clostr_CDMH1_NC_024144: conserved hypothetical protein (XkdN-like); CD630_29080; phage(gi640884874)     1.68e-64            [Clostridioidesdifficile630]
complement(3399369..3399839)       PHAGE_Clostr_CDMH1_NC_024144: putative core tail protein; CD630_29090; phage(gi640884872)     5.85e-95            [Clostridioidesdifficile630]
complement(3399856..3401166)       PHAGE_Clostr_CDMH1_NC_024144: putative tail sheath protein; CD630_29100; phage(gi640884871)     0.0                 [Clostridioidesdifficile630]
complement(3401168..3401344)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29101; phage(gi640884870)     2.74e-27            [Clostridioidesdifficile630]
complement(3401337..3401777)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29110; phage(gi640884869)     4.03e-96            [Clostridioidesdifficile630]
complement(3401767..3402192)       PHAGE_Clostr_CDMH1_NC_024144: putative tail protein; CD630_29120; phage(gi640884868)     2.05e-98            [Clostridioidesdifficile630]
complement(3402192..3402539)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29130; phage(gi640884867)     1.13e-78            [Clostridioidesdifficile630]
complement(3402533..3402934)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29140; phage(gi640884866)     3.85e-89            [Clostridioidesdifficile630]
complement(3402944..3403177)       PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CD630_29150; phage(gi971819970)     1.80e-46            [Clostridioidesdifficile630]
complement(3403177..3404076)       PHAGE_Clostr_CDMH1_NC_024144: putative major capsid protein; CD630_29160; phage(gi640884865)     0.0                 [Clostridioidesdifficile630]
complement(3404088..3404651)       PHAGE_Clostr_CDMH1_NC_024144: putative minor structural protein; CD630_29170; phage(gi640884864)     1.22e-130           [Clostridioidesdifficile630]
complement(3404961..3405191)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29190; phage(gi640884862)     3.21e-47            [Clostridioidesdifficile630]
complement(3405169..3406662)       PHAGE_Clostr_CDMH1_NC_024144: putative minor head protein; CD630_29200; phage(gi640884861)     0.0                 [Clostridioidesdifficile630]
complement(3406652..3408091)       PHAGE_Clostr_CDMH1_NC_024144: putative phage portal protein; CD630_29210; phage(gi640884860)     0.0                 [Clostridioidesdifficile630]
complement(3408097..3409338)       PHAGE_Clostr_CDMH1_NC_024144: putative phage terminase large subunit; CD630_29220; phage(gi640884859)     0.0                 [Clostridioidesdifficile630]
complement(3409328..3410020)       PHAGE_Clostr_CDMH1_NC_024144: putative phage terminase small subunit; CD630_29230; phage(gi640884858)     1.40e-135           [Clostridioidesdifficile630]
complement(3410090..3410317)       PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CD630_29240; phage(gi971820043)     1.36e-45            [Clostridioidesdifficile630]
3410441..3410758                   PHAGE_Clostr_phiMMP01_NC_028883: hypothetical protein; CD630_29250; phage(gi971820042)     4.48e-72            [Clostridioidesdifficile630]
complement(3411003..3411614)       PHAGE_Clostr_phiCD119_NC_007917: hypothetical protein; CD630_29260; phage(gi90592711)     6.67e-144           [Clostridioidesdifficile630]
complement(3412606..3413754)       PHAGE_Clostr_phiCD27_NC_011398: putative phage DNA-binding protein; CD630_29270; phage(gi209901309)     0.0                 [Clostridioidesdifficile630]
complement(3413788..3414543)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CD630_29280; phage(gi209901308)     1.02e-178           [Clostridioidesdifficile630]
complement(3414864..3415352)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29290; phage(gi640884938)     5.38e-113           [Clostridioidesdifficile630]
complement(3415446..3416186)       PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; CD630_29300; phage(gi640884937)     4.36e-88            [Clostridioidesdifficile630]
complement(3416249..3416656)       PHAGE_Clostr_CDMH1_NC_024144: putative endodeoxyribonuclease protein; CD630_29310; phage(gi640884936)     1.33e-81            [Clostridioidesdifficile630]
complement(3416646..3417044)       PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CD630_29320; phage(gi414090437)     1.04e-59            [Clostridioidesdifficile630]
complement(3417187..3417513)       PHAGE_Clostr_CDMH1_NC_024144: putative peptide chain release factor protein; CD630_29330; phage(gi640884934)     6.44e-67            [Clostridioidesdifficile630]
complement(3417584..3417955)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CD630_29340; phage(gi209901301)     6.56e-72            [Clostridioidesdifficile630]
complement(3417948..3418121)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29341; phage(gi640884932)     1.05e-21            [Clostridioidesdifficile630]
complement(3418130..3418513)       hypothetical protein; CD630_29350                                                    N/A                 [Clostridioidesdifficile630]
complement(3418525..3419520)       PHAGE_Clostr_phiMMP02_NC_019421: hypothetical protein; CD630_29360; phage(gi414090433)     0.0                 [Clostridioidesdifficile630]
complement(3419615..3419890)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29370; phage(gi640884927)     1.35e-59            [Clostridioidesdifficile630]
complement(3420498..3420878)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29380; phage(gi640884921)     3.83e-79            [Clostridioidesdifficile630]
complement(3420882..3421232)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29390; phage(gi640884920)     6.77e-74            [Clostridioidesdifficile630]
complement(3421244..3421507)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29400; phage(gi640884919)     1.24e-51            [Clostridioidesdifficile630]
complement(3421581..3421997)       PHAGE_Clostr_phiMMP02_NC_019421: single-strand DNA binding protein; CD630_29410; phage(gi414090424)     7.16e-99            [Clostridioidesdifficile630]
complement(3422013..3422186)       PHAGE_Clostr_CDMH1_NC_024144: hypothetical protein; CD630_29420; phage(gi640884916)     7.07e-34            [Clostridioidesdifficile630]
complement(3422246..3423196)       PHAGE_Clostr_phiCD27_NC_011398: putative phage replication protein; CD630_29430; phage(gi209901292)     0.0                 [Clostridioidesdifficile630]
complement(3423205..3423795)       PHAGE_Clostr_CDMH1_NC_024144: putative essential recombination protein; CD630_29440; phage(gi640884914)     1.75e-136           [Clostridioidesdifficile630]
complement(3423805..3424314)       PHAGE_Clostr_CDMH1_NC_024144: conserved hypothetical protein (Gp157-like); CD630_29450; phage(gi640884913)     2.70e-107           [Clostridioidesdifficile630]
complement(3424400..3424717)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CD630_29460; phage(gi209901289)     1.52e-68            [Clostridioidesdifficile630]
complement(3424817..3425035)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CD630_29470; phage(gi209901288)     1.37e-34            [Clostridioidesdifficile630]
complement(3425019..3425207)       PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CD630_29471; phage(gi209901287)     1.00e-37            [Clostridioidesdifficile630]
complement(3425273..3426067)       PHAGE_Clostr_CDMH1_NC_024144: putative anti-repressor protein; CD630_29480; phage(gi640884902)     2.75e-171           [Clostridioidesdifficile630]
3426103..3426114                   attR                                                                                 N/A                 AGGTTTTCTTAT
complement(3426115..3426336)       PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; CD630_29490; phage(gi209901282)     4.40e-46            [Clostridioidesdifficile630]
3426490..3426945                   PHAGE_Clostr_phiCD27_NC_011398: putative phage repressor; CD630_29500; phage(gi209901281)     4.93e-107           [Clostridioidesdifficile630]
3426963..3427436                   PHAGE_Clostr_phiCD27_NC_011398: hypothetical protein; CD630_29510; phage(gi209901280)     5.30e-111           [Clostridioidesdifficile630]
3427501..3428859                   PHAGE_Clostr_phiCD27_NC_011398: putative phage site-specific recombinase; CD630_29520; phage(gi209901279)     0.0                 [Clostridioidesdifficile630]
3442668..3442679                   attR                                                                                 N/A                 GATTTATTAAAA
