gi|150378263|ref|NC_009622.1|  Sinorhizobium medicae WSM419 plasmid pSMED03, complete sequence. 219313, gc%: 60.06%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(175249..176012)         PROPHAGE_Brucel_1330: ISBm1, transposase orfB; Smed_6478; phage(gi23501425)          1.17e-80            SinorhizobiummedicaeWSM419MTRRRYELTDHEWSILSPLLPNKPRGVPRVDDRRVLNGILWRFRTGSPWAEIPERYGPPTTCYNRFVRWRKAGVWDRLLEAVSEAYDGDIVMIDSTCVRVHQHAATGKKGDGDDGGMGRSRGGLTSKIHALVDAEGRPVNLRLTGGQIADCTEADALTDELGEGDILLADKGYDSNAIRAKVAERKAWANIPPKTNRKGSFVFSRWVYRQRNLVERFFNRIKQFRGIATRYDKHPENYLAAVKLVAARIWCQSL
176652..176987                     hypothetical protein; Smed_6480                                                      N/A                 SinorhizobiummedicaeWSM419MVSICRRWSCSLPERATSRSPQGGAEFSAGSVRTSDASDKDQDCLPTHRVYAKSARGHDIEVGGIWKKENQDGKPYYTLSIRKLRYNANLGRFPGQDDASLQAIIEWVPRD
177515..177781                     CopG/Arc/MetJ family transcriptional regulator; Smed_6482                            N/A                 SinorhizobiummedicaeWSM419MISADLGKQLESYIQQLVDAGRYGSKSEVLREGVRLIQDRETRLAALDASIMRGLADADACRTKPANEVFDRLEAKYRAMAEQAEKSA
177778..178074                     addiction module antitoxin; Smed_6483                                                N/A                 SinorhizobiummedicaeWSM419MIVEFSDEAESDLEQIADYIAKDNPRLALSFVQELRAKCERLGDTPNGFPLVPRYEEYGIRRRVHSSYLIFYRVEGEQIVIVHVLHGAMNYAAILFES
complement(178647..178952)         hypothetical protein; Smed_6485                                                      N/A                 SinorhizobiummedicaeWSM419MARSKIIYTLKEIADMIGENLELLEEVTSNSDNIAEGEMVHVRDGSEYGTRGLTGDGVEGLQELLADIRTWDGGIRQFLIDERCDPEMIERIMADEVKRNR
complement(178952..180520)         PHAGE_Stx2_c_1717_NC_011357: transposase; Smed_6486; phage(gi209447153)              6.80e-135           SinorhizobiummedicaeWSM419MAWKQRRCTLRTSYLLCARSSLNRRRNSAQEAEVSKRDSIIGLLRAQLELLRHRQHGPSSEKIDRKIEQFELMLEEIEASRAEADARSANSPLPELDDEPDKPKRRPLPDGLPTEELVYAAPCNCPTCGGTSFLKAADKVVQVMEHVPASVKIVRHIEKRMVCKDCDTTVSGEMPTLPIGRGKPGPGLLAHIMVAKFDDHIPLYRLSEMYDRLGIDISRSVMADWVGRVSVLLSPLILLIRAHIAAVDRIHTDDTPVDVLDPGRGKTKTGRVWVYVFDGSGYQDPTPRAVAYYYSPDRKGAHPADHLADFSGVMHADGYGGYKKLYGNQIVEAACMAHVRRKFHDVIKLKPSPIAEEALSRIGALYDIEDRIRGMPAAERQMLRQEHAGPILRDLKFWIEETLPTLPQKQKLAEAMRYALSRWAALSVYIDDGRVEIDNNIAERAMRPLGIGRKNWLFAGSDKGGERIADILTIIETAKQHGLNPEVYLTDVLTRIQDHPTDRLEELLPWQWAPAKDLHEAA
complement(180587..180934)         PHAGE_Stx2_c_1717_NC_011357: transposase; Smed_6487; phage(gi209447152)              3.38e-34            SinorhizobiummedicaeWSM419MIGPSGNVRVYLACGVTDMRRGIAGLSALVEAVIKEAPGSGAIFGFRGKRADRIKLLWWDGQGFCLFYKILERGYFPWPTAKDGVAHLTQAQLSMLVEGIDWRRPAWTSAPGRMG
complement(180931..181314)         PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; Smed_6488; phage(gi17546153)     1.94e-14            SinorhizobiummedicaeWSM419MAKVEILTGAERQRRWSAEQKLSILQEAFGPDGSVSVVARRHDILPQQIYAWRKKFSPPKLEGPKSASFIPVSVIAPESPADGSKRSGLRSWSKDVEIVLRNGRVLRIAADADLELLSALIACVEAA
complement(181476..181835)         autoinducer synthesis protein; Smed_6489                                             N/A                 SinorhizobiummedicaeWSM419MHRLRAQVFGSRLGWDVEITAEEERDEYDRLGPIYILEIDATDRVAGCVRLLPAIGPTMLRQTFPQLLREGRREVPPGMIESSRFCVDTYLEAGRGGGQLHQARLTMFGGIIEWWTASG
182259..183473                     PHAGE_Entero_N15_NC_001901: plasmid partition protein SopA; Smed_6490; phage(gi9630492)     1.74e-31            SinorhizobiummedicaeWSM419MAKTAAKTAPVFEGLTALMERHADALSSQLQAHHLKVFPPTSGKGIRTFAPSEASKLLGVGESYLRQTASEMPELNVSMSPGGRRTFSIEDIHAIRKHMDQVGRGNRRYLPHRRDGEQLQVISVMNFKGGSGKTTTAAHLAQYLAMRGYRILAIDLDPQASLSALFGSQPETDVGPNETLYGAIRYDEEQVPVEQVVRGTYIPDLHLIPGNLELMEFEHDTPRALMKRKQGDTLFYGRISQVIEDIADNYDVVVIDCPPQLGYLTLSALTAATSILVTVHPQMLDVMSMNQFLAMTSNLLREIENAGAQFKFNWMRYLITRFEPSDGPQNQMVGYLRSIFGEHVLNFPMLKTTAVSDAGLTNQTLFEVERSQFTRSTYDRALEAMNAVNDEIESLVKKAWGRPA
183470..184492                     PHAGE_Gordon_Schwabeltier_NC_031255: tail tip protein; Smed_6491; phage(gi100054)     3.89e-08            SinorhizobiummedicaeWSM419MSRKHILGVSTDAPDTSSADNRTAKSRSMPLLGVVRKERDPSTKLTANIGNALREQNDRLGRAEEIERRLAEGQAVVELDASFIEPSFVQDRMQGDIDGLVASIREQGQQVPILVRPHPDQPSRYQVAFGHRRLRAVSDLGLPVKAVVRDLTDEQLVVAQGQENNEREDLTFIEKARFAHRLNKQFSREIVIAAMSIDKSNLSKMLLIVDVLPSELIDAIGAAPGVGRPSWHQLAELVEKAASPSDAIKFAASAEVQALPSPDRFKAVIRHLKPRRIARGLPDVMSTPDGDRLAQVTQSRSKLEITIDRKATPDFAAFVLEHLPALYQSHRAKHQRKQGD
184647..185861                     PHAGE_Rhizob_RHEph10_NC_034248: hypothetical protein; Smed_6492; phage(gi100039)     6.52e-26            SinorhizobiummedicaeWSM419MQMGSVTTPFGRRPMTLALARRQAALADIRQGKTADKWKVFRDASAAMELLGIQSNSLTVLDALLSFYPENELRQDAQLIVFPSNVQLALRAHAMAGATLRRHIAILVEAGLIVRKDSANGKRYARKDSDGQIESAFGFDLSPLLARSEELAVMAQQVMADRAAFRKAKENLTICRRDVRKLITAAMEEGAEGDWQAFEDIYVALVSRIPRVPTLAYVARVLEEMERLRQEVVNRLQMRENSRNISTNDAHCEQHIQNSNPESICEIEPSPGKELGAKPSKIRRPKSEPIKAFPLGVVLKACPTISDYGPGGAIGNWRDLMSAAAVVRSTLRVSASAYQEACEAMGPENAAVAVACILERANFINSAGGYLRDLTRRTERGEFSLGPMIMALLRANGQGSLQAG

#### region 2 ####
188291..188303                     attL                                                                                 N/A                 GGTCGATGTTGCC
complement(196795..197724)         PROPHAGE_Xantho_33913: IS1477 transposase; Smed_6506; phage(gi77747809)              9.06e-71            SinorhizobiummedicaeWSM419MVGPAAKREAVAHLKAVMGLSERRACQIISADRKMVRYRSRRPSEAELRKKLRDLANERRRFGYRRLFVLLRREGEPSGVNRIYRLYREEGLSVRKRKARRRAVGTRAPILVEAKANARWSLDFVHDQFACGRRFRVLNIVDDVTRECLAAIPDTSISGRRVARELTALLERRGKPGMIVSDHGTEFTSNAILAWSKEHKVEWHYIAPGKPMQNGYIESFNGRMRDELLNESLFFGLDHARSAIAEWADDYNHSRPHSSLGYQTPARYAGTIAATGFNAVQDEGYAFPPVAPTAPSGVMKTAEALIAAG
complement(197718..197984)         PROPHAGE_Xantho_306: ISxac2 transposase; Smed_6507; phage(gi21244663)                2.54e-34            SinorhizobiummedicaeWSM419MKKQRFTEEQIIAVLKEQEAGAKVADLCRKHGISDATFYNWKAKFGGMEVSEAKRLKALEEENAKLKKLLAEQMLDAAALRELLAKKW
198161..201754                     hypothetical protein; Smed_6508                                                      N/A                 SinorhizobiummedicaeWSM419MRLHHLGPDFPEALVYELLEGNVVFLCGAGVSAPQLPNFRDLVLNVYARLGEERTPAEDHAFQASRYEEVLGALSRRLVRSEDVIDAAAAELQVPANPDTAHHDVILRLSRDQVGRPIIVTTNFDTLFERSLMVSHSAAFATEESAAGQDIPAPGSARFTGVVHIHGRLTDVELNLSKTELVLTSAQYGEAYLRAGWAARFLFDLMRCRTLVLVGYTANDAPVRYILNVLEGDRERFTDLRRVYALSSSNGDPRAAAAPWQALAVEPLLFEPEGGNPYGPLWSSLEGLANLVENPDVRRREMIAAIVSGPVFETTDHDIRTLKWALGARADLFEHFITRCEDAAWFDTLAVEIRAFGERARAWMLARWFARGWDDRVRYLTAIKHLGRGSQELSDAVFRELDQNRPQDATWEKAWRLLAEAAAAASHDSLRDYQLHHRLNRGPVVESDLGRLVNAIGPHLTIEAPFRDEDPSEHPNQLSDIARFSMESQHQEFLQDVLASLVGNAENILRLLERASQRLACQLRTARDAELIGEVRDVTDFGVPSVVNHPQNQHRRGFVPLTVLITSAVPMAAQANLEGTKRVIDGWRAEPFNLTTRLWMHALTHQALFTADEAIDALATSSEVAFWSFALEFVAIVRARIAQASGESVQRLVRRLLVEGPQRYADQEQSADGIDWQDRARDRDIWVRLTGIGEHVVLPQEAETLLHEIRERRTYLSREIDERDLFRTWSSGVRAVRGRTAQIVSAQPSERLTIADRLEESSDIEDREGWGEYCREDPVGAYAALRSRPLEMGVVARWATWLEIIPSRANMTSPEWLRVIQEAVGLLGEADDEIVNVLVGPLARITEHARQLQLALPANWWDRLWQAAEGEPEVDWGDDVETYDRVINSTGGSLAEALLQAISSQRENGDDVNAADLHRLQRMIVSTTYSGEMARGACVRYLSFVFSVSHEITLNHLRPFISADNDEGRRLRGVLVEYNSFVADAEISFADLILQGVRESRQKDISAANAASHLVRAVVASFDEPNVARGISPQQARQTLREAAADIRVGALKIMTNWLEEAPVDNRAAAWTDLYGPTFQAIWPRDRSYLSNAVSKDVFSLATAAGAAFDAAVEALLPYVSTFEDDWLSLHDLERNNAELATRFPVAALRLVWAACGPPCKGRTSDIAAILDAIAAANPALVIDRRMHKLRLLAVSH
complement(201862..202500)         hypothetical protein; Smed_6509                                                      N/A                 SinorhizobiummedicaeWSM419MVEVKHYKRTAKKSFSEVMTDYPAAHPNAPIVLVNYGPIGDILNCIPLSAKARCVTVEHLTVLNRRAREEFRDLVRKVIGRPVRAALEFGGTTRAKRAVAVDVSRSMAPVLSDPRFSSALAATAVAPHASEIFPIDRRVHTAVSVEQAVERLHSIQGDINALEAPVTELLGTYEEVIVLTDGLNDLSTLRSASEEFAAGSCFRVTVRRPEST
203023..203406                     PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; Smed_6511; phage(gi17546153)     1.94e-14            SinorhizobiummedicaeWSM419MAKVEILTGAERQRRWSAEQKLSILQEAFGPDGSVSVVARRHDILPQQIYAWRKKFSPPKLEGPKSASFIPVSVIAPESPADGSKRSGLRSWSKDVEIVLRNGRVLRIAADADLELLSALIACVEAA
203403..203750                     PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail tip protein; Smed_6512; phage(gi100054)      3.38e-34            SinorhizobiummedicaeWSM419MIGPSGNVRVYLACGVTDMRRGIAGLSALVEAVIKEAPGSGAIFGFRGKRADRIKLLWWDGQGFCLFYKILERGYFPWPTAKDGVAHLTQAQLSMLVEGIDWRRPAWTSAPGRMG
203821..205386                     PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail assembly protein; Smed_6513; phage(gi100053)     7.39e-139           SinorhizobiummedicaeWSM419METTPLHTQDELSALRALVAEQAAKLSAQEAEVSKRDSIIGLLRAQLELLRHRQHGPSSEKIDRKIEQFELMLEEIEASRAEADARSANSPLPELDDEPDKPKRRPLPDGLPTEELVYAAPCNCPTCGGTSFLKAADKVVQVMEHVPASVKIVRHIEKRMVCKDCDTTVSGEMPTLPIGRGKPGPGLLAHIMVAKFDDHIPLYRLSEMYDRLGIDISRSVMADWVGRVSVLLSPLILLIRAHIAAVDRIHTDDTPVDVLDPGRGKTKTGRVWVYVFDGSGYQDPTPRAVAYYYSPDRKGAHPADHLADFSGVMHADGYGGYKKLYGNQIVEAACMAHVRRKFHDVIKLKPSPIAEEALSRIGALYDIEDRIRGMPAAERQMLRQEHAGPILRDLKFWIEETLPTLPQKQKLAEAMRYALSRWAALSVYIDDGRVEIDNNIAERAMRPLGIGRKNWLFAGSDKGGERIADILTIIETAKQHGLNPEVYLTDVLTRIQDHPTDRLEELLPWQWAPAKDLHEAA
205386..205691                     hypothetical protein; Smed_6514                                                      N/A                 SinorhizobiummedicaeWSM419MARSKIIYTLKEIADMIGENLELLEEVTSNSDNIAEGEMVHVRDGSEYGTRGLTGDGVEGLQELLADIRTWDGGIRQFLIDERCDPEMIERIMADEVKRNR
205785..206840                     PROPHAGE_Escher_CFT073: transposase insD; Smed_6515; phage(gi26251005)               3.59e-48            SinorhizobiummedicaeWSM419MKAVADTLGVSRSNLVERLKGRSKPRGSYRKAEDAELLPIIRRLVDQRPTYGYRRIAALLNRERRAADQPVVNAKRVHRIMGNHAMLLEKHTAARKGRIHDGKVMVMRSNLRWCSDGLEFTCWNGEVIRLAFIIDAFDREIIAWTAVANAGISGSDVRDMMLEAVEKRFTATRAPHAIEHLSDNGSAYTARDTRLFAQALNLTPCFTPVASPPGPSSLRSRAAFSDTRGRRRIVFSGVLATDAAGTATSTSSSGLVLFSDAAIKRSSSASSNCWISRSIFSEDLPKTCFFSLAMRSRSSPINWSCTCNVADIFAFSACRAAIIAFRKAGSSGRFWLAFDMNLTTIGQGEYP
207145..207156                     attL                                                                                 N/A                 GATCAACCGCCT
complement(207573..208307)         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; Smed_6518; phage(gi557307613)     9.12e-37            SinorhizobiummedicaeWSM419MERSQILDMMGTLKLFGMRSAYDEIMASGIKRQHEPPRIVGDLLQSEIAEKQARSIKYQIAVAKLPLAKDIDDFDFTDTPVNEGLVRQLATGAFLAEQHNIVLVGGTGTGKSHLSIALARALIRNGARGRFFNVVDLVNRLETEARNGKQGRLADFITRLDFVIMDELGYLPFAQAGGQLLFHLISRLYERTSIIVTTNLAFGEWPAVFGDAKMTAALLDRLTHHCEIIETGNESWRFKNRSQS
complement(208309..209808)         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; Smed_6519; phage(gi557307612)     1.55e-25            SinorhizobiummedicaeWSM419MLVVETIAKIRRLALVQGKSIKAICRELGISRKVVRKVLRTDETEFKYERTRQPQPKLGPWRDKLDQLLLNNEAKASRERLTLIRIFEDLRDLGYEGGYDTVRRYARTWAKERGAVTAQAYVPLYYAPGEAYQFDWSHEIIVLNGVTTTVKVAHVRLCHSRMMYVRAYPRETQEMVFDAHDRAFAFFGGACTRGIYDNMKTAVETVFVGKERQYNRRFLQMCSHYLIEPVACTPASGWEKGQVENQVNLVRERFFTPRLRFKSYDELNGWLLDKCISYARAHKHVDQPERTIWEVFETEKPHLVSYPGKFDGFHAVQASIGKTCLVRFDNNKYSVLSTAVGRPAEIHAYADRIVIRQDGVEIGQHDRCFGRGETIYNPWHYVPVLTRKPGALRNGAPFHDWVLPAAMEKVRRRLKAMHDGDRQMVSILECVGLDGLPAVEAACQEALDQGVFSAAVIINILARNRDPQPAAILSIPDALRLTYEPLADCARYDSLRRAS
217533..217544                     attR                                                                                 N/A                 GATCAACCGCCT
218018..218030                     attR                                                                                 N/A                 GGTCGATGTTGCC
