gi|188993864|ref|NC_010729.1|  Porphyromonas gingivalis ATCC 33277, complete genome. 2354886, gc%: 48.36%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(1543086..1545095)       PHAGE_Ralsto_RSF1_NC_028899: putative DNA ligase; PGN_1388; phage(gi971754035)       4.38e-137           PorphyromonasgingivalisATCC33277MEKIVPPAVRIEELRRILREHEYRYYVLSSPTIDDFEYDAMMKQLEELEREYPEWDSPDSPTHRVGSDKTEGFASVRHDRPMLSLSNTYNYDEIGDFYRRVSEGLQGAPFEIVAELKFDGLSISLIYEDGMLVRAVTRGDGIMGDDVTANVRTIRSVPLRLRGDDYPRMLEVRGEILLPFKEFDRINAQREAEGEPLFANPRNAASGTIKQLDPHIVAGRNLDAYFYYLYSDEPLAENHYDRLMQARQWGFKVSDAVTLCCSKEDVYAFIDRFDTERLTLPVATDGIVLKVNAPAQQDLLGFTAKSPRWAIAYKYQAERVRTRLQHVSYQVGRTGAVTPVANLDPVLISGTVVRRASLHNADFIAEKDLHEGDFVYVEKGGEIIPKIVGVDTDARSIDGRPIVFTVLCPDCATPLVREQGEAAYYCPNAEGCPQQQKGRLEHYCGRKAADINIGPETIELLYSRNMIRNVADFYALTEEQLLTLPGFKKRAAAKLLDSIEASKARPYQAILFGLGIRFVGETVAKKLAAVYPSIDALAAATSEELVQIDEIGERIAAAVLHFFSLRQNRELIERLRLAGVSLEAETVSVPVSARLAGKTVVISGTFEKYSRDEYKAMVEDNGGRMAGSVSSKTSFILAGSDMGPSKREKAEKLGVRLMSEEEFLRLIEE
complement(1545083..1545610)       PHAGE_Bacill_SPbeta_NC_001884: hypothetical protein; PGN_1389; phage(gi9630137)      2.64e-09            PorphyromonasgingivalisATCC33277MTDLFSSEQVRLRALEPEDLDFLYLWENDAELRESGNMLVPIGRNRLREYIKKSSEGLMELGMMRLVICLSDDDKPIGAIDLYEYDAFHRRVAVGLFVIPEYRRLGIAVESLRKISHYVLDYLRLHQIIAYVLEDNKPSRMLFEAAGFEHTATLRQWMWHAGDYSDVLLYQLWKR
complement(1545617..1546240)       recombination protein RecR; PGN_1390                                                 N/A                 PorphyromonasgingivalisATCC33277MIQKYPSRLLEKAIDQFATLPGVGRKTALRLALYLLRQPVENTRQFAAALVDLREHISYCRRCHNISDSGVCTICADPTRDQSTLCVVENIRDVMAIENTSQYRGLYHVLGGVISPMDGIGPGDLQIDSLVHRVASEQIHEVILALSTTMEGDTTNFFLFRKLESTGVRVSVIARGIAIGDEIEYADEITLGRSILNRTDFSDSVKF
complement(1546237..1547796)       putative ribonuclease E; PGN_1391                                                    N/A                 PorphyromonasgingivalisATCC33277MNSELVIDVKPKEVSMAVLEDGKLVELQREPRNLSFAVGDIYLGKVKKVMPGLNAAFVDVGYKKDAFLHYLDLGLTFDAQQKMMEMMTKSKSIPSLSKVPLGSDLPKEGKIADVLKAGQQILVQIAKEPISTKGPRLTAELSFAGRSLVLVPFADKVSVSQKIRSAEERARLRQLIISIKPKNFSVIIRTSAEGKRASELDKELQSLLRRWDDNIKKLLRAKAPSIVYEEASRTLGLLRDNFNPSYQSIIVNDKAFRDSLSDYVELIAPGREEIVQYYQGELPIFDHFAITKQIKALFGRTVTYKSGAYLIIEQTEAMHVVDVNSGNRSRGSTEQEATAVDVNMAAAEELARQLRLRDMGGIIVVDFIDMSEAQHRQQLYEHMVKLMSADRARHNILPLSKFGVMQITRQRVRPAMVIHTEECCPTCLGTGKVESSILFTDQLEEKVAKMVTEHQVKQFVLHVHPYVAAYLKKGFLSSILKKWKLKYAKGIKLIPDESLGFLDYTFYDYDGNELDILDE
complement(1547949..1548041)       hypothetical protein; PGN_1392                                                       N/A                 PorphyromonasgingivalisATCC33277MPNGKKRKRHKMATHKRKKRLKKNRHKKKK
complement(1548072..1548350)       PHAGE_Sodali_phiSG1_NC_007902: DNA-binding protein HU-beta; PGN_1393; phage(gi89886013)     2.34e-12            PorphyromonasgingivalisATCC33277MTKADVVNAIAKSTGIDKETTLKVVESFMDTIKDSLSEGDNVYLRGFGSFIVKERAEKTARNISKQTTIIIPKRNIPAFKPSKIFMSQMKQD
complement(1548462..1549592)       PROPHAGE_Shewan_MR-1: transposase, putative; PGN_1394; phage(gi24373689)             1.80e-46            PorphyromonasgingivalisATCC33277MYHSLFESLCMVPGPRIERKKIYPLDFLLLIVFLSTLSGNTSWYEIEDYAEEYEEELKSLYEMLTGHQLMHTMPSHDTLNRSISLLDVEAFEGAYKRWIEGFISATSGKHICIDGKTMRGVKKLSFDTQSHVVSAFSPQDMCSLAQLYIDRKTNEIPAIHQLLDLLDLNGAVVSIDAIGTQTAIVEQIIDKGGDYVLCVKANQSLSLQEIEAYFCPLFQKHILLDEQTELSHGRIETRRYESILNPLEIEANEVLTRRKGLRSIHKVVRKRRDKKSDKTSEEVAYYISSLTDVSSLKQAIRGHWAIENKLHHCLDVYFGHDASHKRTRNVAQIMDIIQKINLLIIERLKTNMKSSIPRIQKKPARMKPQQLITIQF
complement(1549744..1550247)       PHAGE_Clostr_phiCD211_NC_029048: Anaerobic ribonucleoside-triphosphate reductase-activating protein; PGN_1395; phage(gi981220959)     4.12e-36            PorphyromonasgingivalisATCC33277MREQVSESIESYGIRLLNVYRETICDGPGLHYSIYLAGCRHACPGCHNPSSWDPEAGVLMTDSILGNIIREINANPLLDGITLSGGDPFYNPAGLTCLLQRLRASCTLPIWCYTGYTLEQLKTDLMLSAPLALIDVLVDGPFVRELFDPTLLWRGSSNQCIIRLHEN
complement(1550268..1552664)       PHAGE_Clostr_phiCD211_NC_029048: Anaerobic ribonucleoside-triphosphate reductase; PGN_1396; phage(gi981220960)     0.0                 PorphyromonasgingivalisATCC33277MEEVILRIVKRDGHVQSFDPEKIRQAIIKAYRAGGVHEEAARIDNIVQSVTDFARQSGELVTVEQIQDRVEEELMRLNPFIAKKYIIYREWRTVERDKRTSMKHTMDGIVTIEKNDVNLGNANMSSHTPAGQMMTFASEVTKDYASKYLLSLRYSRAHRAGDIHIHDLDYYPTKTTTCVQYDIADLYERGFRTKNGSIRTPQNIHSYATLATIIFQTNQNEQHGGQAIPAFDFFMAPGVRKSFVTHLIERLRFVLELRQPTNTDLSTTLPKAIRNLTPLLTDSPQEAGRLYEGLCSASFPFSSTEVEIALATAFRKTRKDTHQAMEGFIHNLNTMHSRGGNQVVFSSINYGTDTSPEGRMVMEELLRATEEGLGHGEVPIFPIQIFKVKEGINYSEADVKSALENFDDAMAGKVLFSAPNFDLLLKACATTAKALFPNFVFLDTPFNLHEDWRADDPKRYLQEVATMGCRTRVFDNVNGPKSSIGRGNLSFTSMNLPRLAIEARHEAEENCPDGDKETIRSEARLLFLESVRRMSTLIADQLYDRYCYQRTALARQFPFMMGNDVWKGGAALEPNEEVGDVIKSGTLGIGFIGGHNAMVAIYGEGHAHNKAAWNTLYDAISVMNDVAQEYKRKYHLNYSVLATPAEGLSGRFTRMDRKRYGIIPGVTDLDYYVNSFHVDVREPIGIAEKIKCEAPFHAITGGGHITYVELDGEAKKNVSVILKIVKMMKDENIGYGSINHPVDTCKGCGFKGVIYDKCPVCGSDRIARLRRITGYLTGSLDTWNSAKQAEEHDRVKHL

#### region 2 ####
complement(2004027..2005241)       PHAGE_Methan_psiM100_NC_002628: MTW1216; PGN_1784; phage(gi11863085)                 5.98e-36            PorphyromonasgingivalisATCC33277MKSSLAGKHIVLGVTGSIAAYKAAVLTRLLIKKEAEVQIVITPAGKEFITPITLSALTSKPVISEFFSGRDGTWNSHVDLSLWADAMLIAPATASTIGKMAHGIADNMLVTTYLSAKAPVFVAPAMDLDMFRHPSTQHNMEILRSYGNHIIEPGEGELASHLVGKGRMEEPECIVEILEAFFKENNCKPLLGKRALVTAGPTYEKLDPVRFLGNYSSGKMGFCIAERLAELGASVTLVTGPTTMQTTVEGIDRIDVESAVEMLEACRKPFEKADITVLSAAVADYRPAEQAEKKMKRETKGDFDLRLTANPDIAATLGALKRAGQRLVGFALETDSGEQEAMRKMKAKHLDAIVLNSLSDAGAGFGVGTNKITIFDSEGRPSDYPLKSKVEVAEDIVDYIIGLV
complement(2005267..2006046)       PHAGE_Crocei_P2559S_NC_018276: DNA polymerase III epsilon subunit; PGN_1785; phage(gi399528694)     1.38e-49            PorphyromonasgingivalisATCC33277MKLNLKNPLIFFDLETTGVDLVRDRIVEISILKVMPDGSEECKTRRINPERSIPPESTAIHGITDEDVKDCPPFRSVAKSLAQWIEGCDLAGFNSTRFDVPMLVEEFLRAGVDIDLRHRKLIDVQTIFHKMEPRTLEAATRFYCNRTLENAHSAEADTRATYDVFKAQLDRYEGTLENDMAFLADFSRQSRNVDFAGRLVYDDNDNVIINFGKYRGRKALDVLRTDSGYYGWIMDADFTLNTKQEFTRLRMSLNNPETK
complement(2006059..2007192)       PHAGE_Rhizob_RR1_A_NC_021560: DNA polymerase III subunit beta; PGN_1786; phage(gi514231512)     7.79e-25            PorphyromonasgingivalisATCC33277MKFEVASNVLLQHLQLIARVIASRSTLPILESVLFELEGDQLRLTAADMANRMSTELTVNNVGGENGSFAVPERILLEPLKELPDQPISFEINMETKAAEIAYSNGHYSFVVQDASTYPVAASLSPEAIVSVIPAEALLSGLSATLFATSQDERRPIMTGVYLDFFEDKLVFVGSDGQILVKQEDANVQSRRRSAFCLPRKACLLLRNVLPRLEGDVTLTYDSNYLHIELGNYTLRARLLEGRYPNYNSVIPTSNPFSVKVDRAQLLSGAKRVSIFSNPATSMLRMEFTPAGIRLSANDIDFSVAAEEHVPAECPADINMRIGFKSDVFQTILQGMPSEEVIMTLADQTRAGLILPAENAPGISLCNLLLPMKLIGE
complement(2007398..2007901)       probable 5-formyltetrahydrofolate cyclo-ligase; PGN_1787                             N/A                 PorphyromonasgingivalisATCC33277MAENRERWSQSIIERIRRLDIFADAKRIGLYHALPDEPDLAGLLREYVQTKQLFIPRVEGDDIAFYAYTGEADLEAEGAYGIAEPTADAATAILPSSLDLLLVPGVAFDRKGSRMGRGKGYYDRFLPATQARLIGVTFSYRLLEELPTDPWDRPMDGVITESETLFC
complement(2007915..2009549)       PROPHAGE_Escher_MG1655: carboxy-terminal protease for penicillin-binding protein 3; PGN_1788; phage(gi16129784)     2.94e-26            PorphyromonasgingivalisATCC33277MKRSSGSGSTLSYILIAAIFSAVGALASHFYFTHKNPSDLNEVLNLIDRNYVDSVDVRKLQHNMIPYLLEQLDPHSVFLSKADNAEEAATLSGGFCGIGVSFNTLLDTIVVTQIVPGGPSDRAGIRAGDRLLQAGSQKLYGKGVDMNTIDDVLRGEKGSVVNILIRRNGKESVHRVVRDDVPLPSLNASYLIEPSIAYVRIDSWTGTTHAEFIEALGRLRKKGATSLILDLRENRGGLLEPAIAMANEFLGKNLPILQIEGKAYPREEISSDGKGILQQIPLVVLVDEFSASSSEVFTGAMQDHDRAQIIGRRTFGKGLVQLPFDLADGSAIRLTVARYYTPSGRSIQKPYSSGVDENYYQDLRNRFNHGELYSADSIPSLGGKIFKTAGGREVYGGGGIIPDIFIPLDTAGLNSYMMKVEDSDLIPRYAFLYSDANRVSLSRFKTVEELGAYLDRTYLIFDFASFAQRYGIPMRTSLINEARNRIKKYINAYIAMNFFDLQGYYQLLLHDDPFILQAISLIKEGKTFPLIYDQKGTQSTDPAA
complement(2009557..2010012)       PHAGE_Cyanop_S_TIM5_NC_019516: deoxycytidylate deaminase; PGN_1789; phage(gi422936228)     1.55e-34            PorphyromonasgingivalisATCC33277MAMTTNEVKDKQLELDKRYLRMARIWAENSYCERRKVGALIVKEQMIISDGYNGTPAGFENICEDENNVTKPYVLHAEANAITKVAGSTNNSSGATIYITAAPCIECAKLIIQSKIKRVVYSEKYRLDEGCRLLERAGIVVDFIDISDIQE
complement(2010093..2010446)       hypothetical protein; PGN_1790                                                       N/A                 PorphyromonasgingivalisATCC33277MDTQTLNSDLRVFMHHIYEFEKGVRSMVLATLANDDIPYAEERLRSRQIPYFAQPTPNTERTNLFFGCKECMEAIRLFVSGRSLNSLTPEEDFIIGAMLGYDICRQCERYCRRKSNS
complement(2010611..2011108)       PHAGE_Bacill_0305phi8_36_NC_009760: flavodoxin; PGN_1791; phage(gi156564204)         1.27e-05            PorphyromonasgingivalisATCC33277MKSIGIFYGSSTGTTSDLAQKIASALGVDSANVMDVANADAAAAAKYDVLLLGSSTWGLGDLQDDWESFLPKLKGENLSGKKVGLFGCGDASSYSDTFCAALGTIKAELANTGCTFIGAYPAEGYSYDETTAEENGQLIGLCVDDANESDQTEARMERWIAAMGL
complement(2011247..2012407)       PHAGE_Strept_20617_NC_023503: glycerate kinase; PGN_1792; phage(gi588295078)         7.89e-45            PorphyromonasgingivalisATCC33277MKKIVIAIDSFKGCLSSVEAGEAAAEGVRAACPIAEVMVLPVADGGEGMQDVLIAATDGQRIAVRAHSPLMEMREASYGISADGQMAFIEMASISGLPLVPEDRRNPMQTTTFGTGELIKDALDRGCRKFIVGIGGSATNDAGLGMLQALGFRFYDRDGRDIGEDAALCGGLLSEVYRIDGSSVHPALADSLFTVACDVRNPFCGPEGAAFAFAPQKGADEEMVARLDDSMQHLAAVIHRHTGQDIVHIPGAGAAGGMGGGLLAFLGAVLKPGIELLLDALHFSEKIREADLILTGEGKADRQTLMGKVPAGVLAEAMKQEIPVVLLAGSIEDAVALNRAGFLGLFPITPSPVSLREAMNPAYARDNLRRTAEQVCRLYAFASARP
