gi|209921875|ref|NC_011416.1|  Escherichia coli SE11 plasmid pSE11-3, complete sequence. 60555, gc%: 48.59%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
5830..5856                         attL                                                                                 N/A                 CAGTAATGGGTTAAGTGATAACAGGTG
8661..9401                         PHAGE_Brevib_Jenst_NC_028805: putative recombinase XerD; ECSE_P3-0011; phage(gi971744895)     3.62e-05            EscherichiacoliSE11MNNVIPLQNSPERVSLLPIAPGVDFATALSLRRMATSTGATPAYLLAPEVSALLFYMPDQRHHMLFATLWNTGMRIGEARMLTPESFDLDGVRPFVRILSEKVRARRGRPPKDEVRLVPLTDISYVRQMESWMITTRPRRREPLWAVTDETMRNWLKQAVRRAEADGVHFSIPVTPHTFRHSYIMHMLYHRQPRKVIQALAGHRDPRSMEVYTRVFALDMAATLAVPFTGDGRDAAEILRTLPPLK
complement(9686..10663)            PHAGE_Salmon_SSU5_NC_018843: putative replication protein RepA; ECSE_P3-0012; phage(gi410491479)     4.31e-135           EscherichiacoliSE11MDKSSGELVTLTPNNNNTVQPVALMRLGVFVPTLKSLKNSKKNTLSRTDATEELTRLSLARAEGFDKVEITGPRLDMDNDFKTWVGIIHSFARHNVIGDKVELPFVEFAKLCGIPSSQSSRRLRERISPSLKRIAGTVISFSRTDEKHTREYITHLVQSAYYDTERDIVQLQADPRLFELYQFDRKVLLQLKAINALKRRESAQALYTFIESLPRDPAPISLARLRARLNLKSPVFSQNQTVRRAMEQLREIGYLDYTEIQRGRTKLFCIHYRRPRLKAPNDESKENPLPPSPAKKVSPEMAEKLALLEKLGITLDDLEKLFKSR
11454..11978                       hypothetical protein; ECSE_P3-0013                                                   N/A                 EscherichiacoliSE11MHRLDEVVDTLLVLQKKHRIRFDVWQVVKRDHAIISFFDQGMNPAVPRVAYWTPFRYPLLLNLASLFDNELAEKAWRARLEAHDGRSSSLFSEVCSELLARVHTLGDRRYIELITDALSWAMTHFDELGYNCKTGKQKLQIMPNMVGFQFVLRGICSRLGAPNRKADIVGNRLI
12156..12692                       PHAGE_Stx2_c_1717_NC_011357: truncated transposase; ECSE_P3-0014; phage(gi209447151)     7.39e-24            EscherichiacoliSE11MFVRFRRAGLSWPLPAGMSEQELDACLYGQFSTVPVVRPESTVISEAPVVKKRPRRPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQYRKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRLKGKLTPALLQTLIREMKGSSH
12692..13039                       PHAGE_Stx2_c_1717_NC_011357: transposase; ECSE_P3-0015; phage(gi209447152)           2.00e-56            EscherichiacoliSE11MISLPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLFIFRGRRGDQIKVLWADSDGLCLFTKRLERGRFVWPVTRDGKVHLTPTQLSMLLEGINWKHPKRTERAGIRI
13059..14420                       PHAGE_Stx2_c_1717_NC_011357: transposase; ECSE_P3-0016; phage(gi209447153)           1.18e-172           EscherichiacoliSE11MDTSLAHENARLRALLQTQQDTIRQMAEYNRLLSQRVAAYASEIYRLKALVAKLQRMQFGKSSEKLRAKTERQIQEAQERISALQEEMAETLGEQYDPVLPSALRQSSARKPLPASFPRETRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIETQRPKLACCRCDHIVQAPVPSKPIARSYAGAGLLAHVVTGKYADHLPLYRQSEIYRRQGVELSRATLGRWTGAVAELLEPLYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQADAYGGYRALYESGRITEAACMAHARRKIHDVHARAPTDITTEALQRIGELYAIEAEVRGCSAEQRLAARKTRAAPLMQSLYDWIQQQMKTLSRHSDTAKAFAYLLKQWDALNVYCSNGWVEIDNNIAEKEWP
14411..14620                       PHAGE_Stx2_c_1717_NC_011357: transposase; ECSE_P3-0017; phage(gi209447153)           4.18e-24            EscherichiacoliSE11MAVGRKNWLFAGSDSGGEHAAVLYSLIGTCRLNNVEPEKWLRYVIEHIQDWPANRVRDLLPWKVDLSSQ
17245..17271                       attR                                                                                 N/A                 CAGTAATGGGTTAAGTGATAACAGGTG
