gi|224504235|ref|NC_012124.1|  Salmonella enterica subsp. enterica serovar Paratyphi C strain 55414, gc%: 52.75%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
39962..40384                       PHAGE_Cronob_ENT39118_NC_019934: protein umuD; SPC_p050; phage(gi431811072)          5.58e-26            SalmonellaentericasubspentericaserovarParatyphiCstrainRKS4594MLLLVAPEQEPVQSTAPLFTERCPAGFPSPAADYTEEELDLNAYCIRRPAATFFVRAIGDSMKEMGLHSGDLMVVDKAEKPMQGDIVIAETDGEFTVKRLQLKPRIALLPINPAYPTLYPEELQIFGVVTAFIHKTRSTD
40384..41658                       PHAGE_Cronob_ENT39118_NC_019934: DNA polymerase; SPC_p051; phage(gi431811050)        0.0                 SalmonellaentericasubspentericaserovarParatyphiCstrainRKS4594MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIARSAEAKKLGIKMGVPWFQLRSAKFPEPVIAFSSNYALYASMSNRVMVHQEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFGRQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFGGMLALTLHNQKRTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAVTEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLNLFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEWQMKRELLSPAYTTRWADIPAAKLT
complement(41740..42714)           PHAGE_Escher_RCS47_NC_042128: portal protein; SPC_p052; phage(gi100069)              2.86e-110           SalmonellaentericasubspentericaserovarParatyphiCstrainRKS4594MSNERRKTIGRQLNTQASMVEMTDTQRSQVFTLKTGRKITFRFVRVPASDVESKTFVNQETNGRDQLALTRESLKSIIQTIKFQQFFPCIGIQQGERIEILDGSRRRASAIYIRTGLDVMVTNELLSADEARHLAKDIQTAKEHNLREIGLRLMALKESGFNQKEIAELEGVSQAKVTRALQAAAVPQELISLFPVQSELSFSDYKILLEVNEKLSEKGLTSEGLIQSVSDQHDAILSDYERPDDEQKSSILKLISQASQALIAPPPKEKSVISALWTFEEKDKFARKRVKGRTLTYEFSRMSKVVQDELDKAINEVLERNLSQ
complement(42714..43919)           PHAGE_Escher_RCS47_NC_042128: terminase large subunit; SPC_p053; phage(gi100070)     0.0                 SalmonellaentericasubspentericaserovarParatyphiCstrainRKS4594MENIEQLRKVATRAGKLLTSLSESIRQQKEELKLTEFYQEYSKAALYKLPKLSKGSVEYAVAEMEASGYIFKKKPSGNTMKYAMTIQNVIDLYFHRKVPKYRDRFDKAFTIFVCNLKGGGSKTVSTASLSHAFRAHPQLLFEDLRILAIDFDPQASLTMFLSHENSVGLVENTAAQAMLQNVSREELLSDFIVSSIIPGVDVIPASIDDAFLAEGWKGLCEEHLPGQNIHAVLKENIIDKLRYDYDFIFLDSGPHLDAFLKNCIGAADLMLTPLPPATVDFHSSLKFVASLPALIDSIEQDGHTCNLIGNVGFMSKILNKSDHKICHSQAKEVFGADMLDMVLPRLDGFERCGETFDTVISANPATYDGSTEALKSAKSAAEDFAKAVFDRIEFIRTNGGM
44334..45275                       PROPHAGE_Escher_MG1655: predicted transposase; SPC_p054; phage(gi16131287)           2.06e-110           SalmonellaentericasubspentericaserovarParatyphiCstrainRKS4594MKKKNTTPTPHDATFRQFLTQPDIARDFMELHLPAELRAICDLSTLKLESGSFVEDDLRQYFSDVLYSLKTTAGDGYIHVLVEHQSTPDKHMAFRLIRYAVAAMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDTALADKLYSSAFPLVDVTVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPILLAGYLSSSQVISLVHYIVQAGETSDAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQLGEQRGIEKGRSEGEREATLKIARTMLQNCIDRNTVMKMTGLTEDDLAQIRH
complement(45307..45873)           hypothetical protein; SPC_p055                                                       N/A                 SalmonellaentericasubspentericaserovarParatyphiCstrainRKS4594MTLTEKSGHLAWCALVALALARQDGGVLSPAQENLFLTRWLATALKQRRFSRDVTPDIEWLLKQGRQMGVSAKLASKLNYLWRSCTGELSEQNDLFRLTYALETAKDMHWNYRLLSDREWSGRNAVALSAGVNGIYLSRAKLDVGFNDSGRQINSLTARLTGNVAGVMKLFDRCGWQSLMPPCPTSIR
complement(45930..46331)           hypothetical protein; SPC_p056                                                       N/A                 SalmonellaentericasubspentericaserovarParatyphiCstrainRKS4594MSQHNAALWLVRQLQGLIQESEMENMLKTMREHFPVRTVVIEQSLDMFGVKRNEDGTLLFPRHSDKRFPVARIRKRLAAYGWRGERLNKEVARIVAGPDILPERRDYSIIFPYGWEKKQLTREMRRMFLRKTG
complement(46318..46437)           hypothetical protein; SPC_p057                                                       N/A                 SalmonellaentericasubspentericaserovarParatyphiCstrainRKS4594MAHSAVTDAVMTAQVVNNIAGYWHELQCEMNDDAGSEPA
complement(46449..46958)           PHAGE_Vibrio_VP882_NC_009016: putative exonuclease; SPC_p058; phage(gi126010887)     2.04e-07            SalmonellaentericasubspentericaserovarParatyphiCstrainRKS4594MRDDDNSDACDEAPRAEDKCYTKGRLRDEFRMKPAPGAEPVRIYKSPYGGKYGVWRLADCVPMRAKRPQTEKQRLASTRLGLQARMKSERGRFAMLAHTWLALGPVFLDTETTGLDAGAQALEIGLVNARGERIFETRLKPTVGIDPAAAAVQIVTEPYRFPVLSVRLA
complement(46951..48066)           PHAGE_Strept_7201_NC_002185: ORF33; SPC_p059; phage(gi9634660)                       4.07e-07            SalmonellaentericasubspentericaserovarParatyphiCstrainRKS4594MRPATYEPEQIIEAGLALQAEGRNITGFALRNQVGGGNPTRLRQIWDEYQASQSTVVTEPVAELPVEVAEEVKAVSAALSERITQLATELNDKAVRAAERRVAEVTRAAGEQTAQAERELADAAQTVDDLEEKLDELQDRYDSLTLALESERSLCQQHDVEMAQLKERLAAAEENTRQREERYQEQKTVLQDALNAEQAQHKNTREDLQKRLEQISAEANARTEELKSERDKVNTLLTRLESQENALASERQQHLATRETLQQRLEQAIADTQARAGEIALERDRVSSLTARLESQEKASSEQLVRMGSEIASLTERCTQLENQRDDARLETMGEKETVAALRGEAEALKRQNQSLMAALSGNKQTGGQNA
