gi|225853611|ref|NC_012466.1|  Streptococcus pneumoniae JJA, complete genome. 2120234, gc%: 39.74%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
20366..20377                       attL                                                                                 N/A                 TTTTGTGTTATA
complement(21303..21509)           PROPHAGE_Staphy_N315: transposase; SPJ_0023; phage(gi15927655)                       9.43e-05            [StreptococcuspneumoniaeJJA]
complement(21652..21795)           transposase; SPJ_0025                                                                N/A                 [StreptococcuspneumoniaeJJA]
complement(21843..22049)           transposase; SPJ_0026                                                                N/A                 [StreptococcuspneumoniaeJJA]
22366..22602                       hypothetical protein; SPJ_0027                                                       N/A                 [StreptococcuspneumoniaeJJA]
22791..24119                       PHAGE_Mycoba_Cali_NC_011271: gp254; SPJ_0028; phage(gi204305879)                     1.42e-26            [StreptococcuspneumoniaeJJA]
24320..24787                       PHAGE_Pseudo_PH1_NC_031908: hypothetical protein; SPJ_0029; phage(gi100008)          1.62e-06            [StreptococcuspneumoniaeJJA]
complement(24996..25712)           PHAGE_Strept_phiBHN167_NC_022791: phage integrase; SPJ_0030; phage(gi557745680)      1.91e-173           [StreptococcuspneumoniaeJJA]
complement(25784..26137)           PHAGE_Strept_phiBHN167_NC_022791: phage integrase; SPJ_0031; phage(gi557745680)      1.10e-71            [StreptococcuspneumoniaeJJA]
complement(26192..27262)           prophage Lp2 protein 6; SPJ_0032                                                     N/A                 [StreptococcuspneumoniaeJJA]
complement(27279..27659)           PHAGE_Strept_phiARI0923_NC_030946: hypothetical protein; SPJ_0033; phage(gi100033)     1.63e-55            [StreptococcuspneumoniaeJJA]
complement(27672..27935)           PHAGE_Mycoba_Xeno_NC_031243: hypothetical protein; SPJ_0034; phage(gi100026)         1.40e-08            [StreptococcuspneumoniaeJJA]
complement(27935..28168)           hypothetical protein; SPJ_0035                                                       N/A                 [StreptococcuspneumoniaeJJA]
complement(28168..28536)           PHAGE_Strept_phiARI0923_NC_030946: hypothetical protein; SPJ_0036; phage(gi100032)     1.15e-39            [StreptococcuspneumoniaeJJA]
28834..28965                       PHAGE_Strept_phiARI0460_1_NC_031913: hypothetical protein; SPJ_0037; phage(gi100044)     7.96e-13            [StreptococcuspneumoniaeJJA]
29108..29299                       PHAGE_Strept_phiARI0468_2_NC_031923: hypothetical protein; SPJ_0038; phage(gi100044)     1.63e-39            [StreptococcuspneumoniaeJJA]
29322..29525                       PHAGE_Strept_phiARI0468_2_NC_031923: hypothetical protein; SPJ_0039; phage(gi100043)     8.67e-42            [StreptococcuspneumoniaeJJA]
29540..29683                       PHAGE_Strept_EJ_1_NC_005294: hypothetical protein; SPJ_0041; phage(gi39653688)       2.49e-27            [StreptococcuspneumoniaeJJA]
complement(29680..29847)           PHAGE_Salmon_103203_sal5_NC_031946: hypothetical protein; SPJ_0040; phage(gi100018)     5.96e-06            [StreptococcuspneumoniaeJJA]
29918..30232                       PHAGE_Strept_phiARI0923_NC_030946: hypothetical protein; SPJ_0042; phage(gi100001)     1.37e-69            [StreptococcuspneumoniaeJJA]
30322..30471                       hypothetical protein; SPJ_0044                                                       N/A                 [StreptococcuspneumoniaeJJA]
complement(30452..30631)           PHAGE_Strept_PH10_NC_012756: hypothetical protein; SPJ_0043; phage(gi238821369)      5.15e-34            [StreptococcuspneumoniaeJJA]
31227..31670                       PHAGE_Lactoc_63301_NC_031017: hypothetical protein; SPJ_0045; phage(gi100020)        2.67e-36            [StreptococcuspneumoniaeJJA]
31630..32187                       phosphoglycerate mutase family protein; SPJ_0046                                     N/A                 [StreptococcuspneumoniaeJJA]
32300..33562                       PHAGE_Lactob_LfeInf_NC_029058: DNA helicase; SPJ_0047; phage(gi985757361)            7.85e-07            [StreptococcuspneumoniaeJJA]
33635..34132                       carbonate dehydratase; SPJ_0048                                                      N/A                 [StreptococcuspneumoniaeJJA]
34157..34816                       hypothetical protein; SPJ_0049                                                       N/A                 [StreptococcuspneumoniaeJJA]
34809..34940                       hypothetical protein; SPJ_0050                                                       N/A                 [StreptococcuspneumoniaeJJA]
35085..36053                       PHAGE_Salmon_7_11_NC_015938: putative ribose-phosphate pyrophosphokinase; SPJ_0051; phage(gi345461227)     8.79e-21            [StreptococcuspneumoniaeJJA]
complement(36175..36468)           PROPHAGE_Staphy_N315: transposase; SPJ_0052; phage(gi15927655)                       1.85e-06            [StreptococcuspneumoniaeJJA]
40938..40949                       attR                                                                                 N/A                 TTTTGTGTTATA

#### region 2 ####
1740144..1740156                   attL                                                                                 N/A                 AGTAAATGATAAA
1741442..1742224                   PROPHAGE_Staphy_N315: transposase; SPJ_1838; phage(gi15927655)                       1.11e-29            [StreptococcuspneumoniaeJJA]
1742221..1742748                   PROPHAGE_Staphy_N315: transposase; SPJ_1839; phage(gi15927655)                       5.89e-12            [StreptococcuspneumoniaeJJA]
complement(1742847..1744469)       PHAGE_Cellul_phi14:2_NC_021806: chaperonin GroEL; SPJ_1840; phage(gi526178751)       4.63e-101           [StreptococcuspneumoniaeJJA]
complement(1744485..1744769)       PHAGE_Bacill_0305phi8_36_NC_009760: GroES; SPJ_1841; phage(gi156564025)              4.43e-07            [StreptococcuspneumoniaeJJA]
complement(1744925..1745302)       PHAGE_Strept_9874_NC_031023: hypothetical protein; SPJ_1842; phage(gi100037)         4.16e-32            [StreptococcuspneumoniaeJJA]
complement(1745329..1745571)       PHAGE_Strept_phiARI0031_NC_031910: hypothetical protein; SPJ_1843; phage(gi100001)     1.86e-39            [StreptococcuspneumoniaeJJA]
complement(1745803..1746759)       PHAGE_Strept_phiARI0004_NC_031920: hypothetical protein; SPJ_1844; phage(gi100002)     0.0                 [StreptococcuspneumoniaeJJA]
complement(1746765..1747094)       PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; SPJ_1845; phage(gi100003)     1.61e-71            [StreptococcuspneumoniaeJJA]
complement(1747098..1747397)       PHAGE_Strept_K13_NC_024357: phage protein; SPJ_1846; phage(gi658307235)              1.70e-65            [StreptococcuspneumoniaeJJA]
complement(1747407..1747757)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1847; phage(gi100003)     1.80e-82            [StreptococcuspneumoniaeJJA]
complement(1747760..1747963)       PHAGE_Strept_phiARI0004_NC_031920: hypothetical protein; SPJ_1848; phage(gi100005)     1.86e-38            [StreptococcuspneumoniaeJJA]
complement(1747944..1748060)       PHAGE_Strept_DCC1738_NC_024361: phage protein; SPJ_1849; phage(gi658307480)          1.68e-18            [StreptococcuspneumoniaeJJA]
complement(1748057..1754383)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1850; phage(gi100005)     0.0                 [StreptococcuspneumoniaeJJA]
complement(1754388..1754738)       PHAGE_Strept_phiARI0746_NC_031907: hypothetical protein; SPJ_1851; phage(gi100001)     1.08e-83            [StreptococcuspneumoniaeJJA]
complement(1754747..1758400)       PHAGE_Strept_phiARI0746_NC_031907: hypothetical protein; SPJ_1852; phage(gi100002)     0.0                 [StreptococcuspneumoniaeJJA]
complement(1758387..1758737)       PHAGE_Strept_phiARI0031_NC_031910: hypothetical protein; SPJ_1853; phage(gi100009)     4.17e-74            [StreptococcuspneumoniaeJJA]
complement(1758776..1759156)       PHAGE_Strept_phiARI0031_NC_031910: hypothetical protein; SPJ_1854; phage(gi100010)     8.11e-88            [StreptococcuspneumoniaeJJA]
complement(1759161..1759574)       PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; SPJ_1855; phage(gi100014)     3.95e-92            [StreptococcuspneumoniaeJJA]
complement(1759577..1759945)       PHAGE_Strept_phiARI0746_NC_031907: hypothetical protein; SPJ_1856; phage(gi100005)     4.68e-86            [StreptococcuspneumoniaeJJA]
complement(1759942..1760268)       PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; SPJ_1857; phage(gi100016)     1.24e-75            [StreptococcuspneumoniaeJJA]
complement(1760432..1760734)       PHAGE_Strept_IC1_NC_024370: Phage protein; SPJ_1858; phage(gi658307773)              3.68e-68            [StreptococcuspneumoniaeJJA]
complement(1760751..1761062)       PHAGE_Brocho_BL3_NC_015254: gp10; SPJ_1859; phage(gi327409400)                       2.65e-06            [StreptococcuspneumoniaeJJA]
complement(1761064..1761252)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1860; phage(gi100012)     7.15e-38            [StreptococcuspneumoniaeJJA]
complement(1761242..1761424)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1861; phage(gi100013)     8.97e-35            [StreptococcuspneumoniaeJJA]
complement(1761436..1762281)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1862; phage(gi100014)     0.0                 [StreptococcuspneumoniaeJJA]
complement(1762287..1762871)       PHAGE_Strept_phiARI0746_NC_031907: hypothetical protein; SPJ_1863; phage(gi100010)     5.33e-138           [StreptococcuspneumoniaeJJA]
complement(1763088..1763339)       PHAGE_Strept_phiARI0746_NC_031907: hypothetical protein; SPJ_1864; phage(gi100011)     6.97e-55            [StreptococcuspneumoniaeJJA]
complement(1763341..1763586)       PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; SPJ_1865; phage(gi100022)     3.83e-54            [StreptococcuspneumoniaeJJA]
complement(1763629..1764042)       PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; SPJ_1866; phage(gi100023)     6.03e-94            [StreptococcuspneumoniaeJJA]
complement(1764039..1764248)       PHAGE_Strept_phiARI0746_NC_031907: hypothetical protein; SPJ_1867; phage(gi100015)     5.91e-44            [StreptococcuspneumoniaeJJA]
complement(1764250..1765833)       PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; SPJ_1868; phage(gi100025)     0.0                 [StreptococcuspneumoniaeJJA]
complement(1765796..1767097)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1869; phage(gi100019)     0.0                 [StreptococcuspneumoniaeJJA]
complement(1767277..1768575)       PHAGE_Strept_phiARI0460_1_NC_031913: hypothetical protein; SPJ_1870; phage(gi100025)     0.0                 [StreptococcuspneumoniaeJJA]
complement(1768553..1769053)       PHAGE_Strept_phiARI0131_1_NC_031901: hypothetical protein; SPJ_1871; phage(gi100028)     1.38e-108           [StreptococcuspneumoniaeJJA]
complement(1769298..1769381)       tRNA                                                                                 N/A                 AGAGAGGTCTCAGAATTGGTAGATGGTTACCTGTAATGTCAGGGGGCTGTAATGGCCTTGGAGGTTCAAGTCCTCCCCTCTCCT
complement(1769461..1769865)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1873; phage(gi100022)     2.67e-82            [StreptococcuspneumoniaeJJA]
complement(1770306..1770743)       PHAGE_Strept_MM1_NC_003050: hypothetical protein; SPJ_1874; phage(gi15088767)        3.53e-48            [StreptococcuspneumoniaeJJA]
complement(1770755..1771177)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1875; phage(gi100029)     3.05e-85            [StreptococcuspneumoniaeJJA]
complement(1771431..1771592)       PHAGE_Strept_IC1_NC_024370: Phage protein; SPJ_1876; phage(gi658307787)              3.52e-20            [StreptococcuspneumoniaeJJA]
complement(1771592..1772284)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1877; phage(gi100027)     1.25e-96            [StreptococcuspneumoniaeJJA]
complement(1772286..1772603)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1878; phage(gi100028)     9.51e-71            [StreptococcuspneumoniaeJJA]
complement(1772826..1773257)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1879; phage(gi100030)     6.54e-99            [StreptococcuspneumoniaeJJA]
complement(1773254..1773652)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1880; phage(gi100031)     1.41e-70            [StreptococcuspneumoniaeJJA]
complement(1773665..1774081)       PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; SPJ_1881; phage(gi100034)     1.19e-97            [StreptococcuspneumoniaeJJA]
complement(1774078..1774194)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1882; phage(gi100034)     6.15e-16            [StreptococcuspneumoniaeJJA]
complement(1774504..1774992)       PHAGE_Strept_phiARI0468_1_NC_031929: hypothetical protein; SPJ_1883; phage(gi100035)     1.92e-113           [StreptococcuspneumoniaeJJA]
complement(1774995..1776059)       PHAGE_Strept_phiARI0004_NC_031920: hypothetical protein; SPJ_1884; phage(gi100035)     0.0                 [StreptococcuspneumoniaeJJA]
complement(1776069..1776887)       PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; SPJ_1885; phage(gi100037)     7.24e-75            [StreptococcuspneumoniaeJJA]
complement(1776924..1777040)       PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; SPJ_1886; phage(gi100039)     3.94e-20            [StreptococcuspneumoniaeJJA]
complement(1777157..1777417)       PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; SPJ_1887; phage(gi100040)     5.58e-56            [StreptococcuspneumoniaeJJA]
complement(1777430..1777684)       PHAGE_Strept_phiARI0031_NC_031910: hypothetical protein; SPJ_1888; phage(gi100043)     1.61e-56            [StreptococcuspneumoniaeJJA]
complement(1777685..1777906)       PHAGE_Strept_phiARI0004_NC_031920: hypothetical protein; SPJ_1889; phage(gi100041)     1.27e-34            [StreptococcuspneumoniaeJJA]
complement(1777906..1778043)       hypothetical protein; SPJ_1890                                                       N/A                 [StreptococcuspneumoniaeJJA]
complement(1778061..1778858)       PHAGE_Entero_EFDG1_NC_029009: hypothetical protein; SPJ_1891; phage(gi971765195)     3.41e-21            [StreptococcuspneumoniaeJJA]
complement(1778925..1779068)       hypothetical protein; SPJ_1892                                                       N/A                 [StreptococcuspneumoniaeJJA]
1779185..1779409                   PHAGE_Gordon_Schwabeltier_NC_031255: hypothetical protein; SPJ_1894; phage(gi100034)     6.55e-06            [StreptococcuspneumoniaeJJA]
complement(1779406..1779588)       hypothetical protein; SPJ_1893                                                       N/A                 [StreptococcuspneumoniaeJJA]
complement(1779773..1780051)       PHAGE_Strept_IC1_NC_024370: Phage protein; SPJ_1895; phage(gi658307803)              3.89e-62            [StreptococcuspneumoniaeJJA]
complement(1780218..1780454)       PHAGE_Strept_phiARI0031_NC_031910: hypothetical protein; SPJ_1896; phage(gi100047)     5.81e-50            [StreptococcuspneumoniaeJJA]
1780528..1780734                   hypothetical protein; SPJ_1897                                                       N/A                 [StreptococcuspneumoniaeJJA]
1781135..1781584                   PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; SPJ_1899; phage(gi100046)     6.27e-105           [StreptococcuspneumoniaeJJA]
complement(1781575..1781706)       PHAGE_Strept_phiARI0462_NC_031942: hypothetical protein; SPJ_1898; phage(gi100047)     1.33e-23            [StreptococcuspneumoniaeJJA]
complement(1781817..1782092)       PHAGE_Strept_phiARI0004_NC_031920: hypothetical protein; SPJ_1900; phage(gi100045)     1.91e-61            [StreptococcuspneumoniaeJJA]
1782253..1783005                   PHAGE_Strept_phiARI0004_NC_031920: hypothetical protein; SPJ_1901; phage(gi100046)     0.0                 [StreptococcuspneumoniaeJJA]
1783087..1783099                   attR                                                                                 N/A                 AGTAAATGATAAA
complement(1783143..1783313)       hypothetical protein; SPJ_1902                                                       N/A                 [StreptococcuspneumoniaeJJA]
1783389..1784816                   PHAGE_Strept_IC1_NC_024370: Integrase; SPJ_1903; phage(gi658307809)                  1.33e-166           [StreptococcuspneumoniaeJJA]
complement(1784952..1785713)       PHAGE_Prochl_P_TIM68_NC_028955: hypothetical protein; SPJ_1904; phage(gi971760361)     2.35e-13            [StreptococcuspneumoniaeJJA]
complement(1785755..1786381)       putative tRNA binding domain protein; SPJ_1905                                       N/A                 [StreptococcuspneumoniaeJJA]
complement(1786397..1786714)       PHAGE_Achrom_JWAlpha_NC_023556: hypothetical protein; SPJ_1906; phage(gi589889361)     3.45e-10            [StreptococcuspneumoniaeJJA]
