gi|227818258|ref|NC_012586.1|  Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence. 2430033, gc%: 62.30%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
914839..915327                     PHAGE_Rhizob_vB_RleS_L338C_NC_023502: periplasmic protein; NGR_b09240; phage(gi588498796)     7.41e-09            SinorhizobiumfrediiNGR234MQNRRRNGGSRPRPREASELSQVNVAVNARIKEHSDRANVGKDDDWRVPARYEDCEDYAIAKKRELLKCGWPASALLLTVARFPGGGHTVLTVRTSEGDLVLDNQTNAVRDWSRTTPYVYLARQSQLDGSRWELIEGRSWFGVEAALDTAANANILASRAYK
complement(915486..916223)         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; NGR_b09250; phage(gi557307613)     3.65e-38            SinorhizobiumfrediiNGR234MLAHPTLDKLNAMGLTGMAKAFNELISNGESEQLSHAEWLGLLLEREWSWRYDRKLAARLRFAKLRHQAVPEDVDYRSERGLDRALFMKLIGGDWIDAHDNLAICGPSGVGKSWLACALGHKACRDDRSVLYQRVPRLFANLALARGDGRYARLQRTLGHVQLLILDDWGLEPLNEQARHDLLEILEDRYGRRSTIITSQLPVSAWHEIIGNPTYADAILDRLVHNAHRIDLSGESLRRNQRRKS
complement(916235..916909)         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NGR_b09260; phage(gi557307612)     3.68e-06            SinorhizobiumfrediiNGR234MLVDLNDTRVLRRVGRTRRQLFEEIDHPALRPLPAERYVFAEWRIRRAGLDYHVDIDKHYYSVPYRFAREQVEARITANTIEIFHKGERIAAHRRSSGNGKHTTTPEHMPSSHRRFADWTIERISREASAIGSDVTLLCERILADRPHPEQGYRACLGIIRLVKAFERERVNAACGRALEIGARTYGSVRSILDNNLDRSPASAGTASPEPIHHSNIRGPRYYH
917056..917325                     transposase number 1 for insertion sequence NGRIS-4f; NGR_b09270                     N/A                 SinorhizobiumfrediiNGR234MRIEFEVTHPFHPWRGQRFVLSTRKQNWGEDRVMFYDADGRLRSLLASWTDVAAPDVFIQIAAGRSFVRPDDLATLAALIEQIERSHGG
917516..918112                     transposase number 2 for insertion sequence NGRIS-4f; NGR_b09280                     N/A                 SinorhizobiumfrediiNGR234MPNETKRERLRELGALNARPEAVRAPWFRESTFFDPLDLVQVKYEMLRHVQEDGVNKADAAALFGLSRPTYYQAEAAFERDGIAGLLPRTRGPKSAHKLTDEVMQLIEQNQHAGAPLQARSLAELLHSTLGISVHPRSIERAIARKKKTVSPMHAPRCYRAAARISTRRCAPPSFAVRPAPRTWAPSFSTAFGKGWRC
918242..920326                     PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative resolvase; NGR_b09290; phage(gi509140068)     2.30e-11            SinorhizobiumfrediiNGR234MSTDIAIKVDADHLRRDAFLYVRQSSLRQVFENTESTKRQYALRDRAVALGWPIERVHVIDSDLGLSGAQSQDRDGFQHLVSEVAMGHAGIVLGLEVSRLARNNADWHRLLELAALSRTLIMDEDGVYDPAYFNDRMLLGLKGTMSEAELHILKSRLQGGILNKARRGELEMPLPIGLVYTPDARVVLDPDRQIQDTVRLLFDTFRQTGSACAVVRRLRGEKILFPRRIRRGIGKGDVLWNEIDHSRVLQILHNPRYAGAFAYGRTRTAYNAKLKPVQLRVARSDWQVLIPDAHDGYISWAEYERNQAALEQNATGFSPGLRGRMPRQGSGLLQGRLLCGRCGARMRVHYEPFEGRLRPYYVCNEAVVRHAGKHCQWVRGAPVDEAVSALLLEVMAPAAIDVALAVQQEITQRVEQAAALRGTQLQRARYEAELARRRYLKVDPDNRLVADALEADWNARLRDLDALQREHERQNEADHSLLDEPAQQRIRALTADFPRIWNDERTGAVERKRMLGLLIEDVTLLVDDEVNINIRWRGGRTQSLSVARPRPMSVIRKTPAQVVALINELLEATNDRQIAARLNELGHRNWRGEPFTPKKVMLVRRTYGLKSRYERLREGGMLTGEEVAQQLGVCESTVHQLGRKGTLKRHRYASNHRYLYEPPGNVRLEKGAGSRYGGRQPRLIVAQPLQQGAS
complement(920288..921106)         Trm23a-like transposase, amino-terminus; NGR_b09300                                  N/A                 SinorhizobiumfrediiNGR234MPAERLKMRRVREILRYRFEEGLGHKSIAVRVGAAPSTVRETLRRLERARLSWPLGDDVSDAVLEAALYKAAGTKTGHRRSVEPDWAHVHRELKRKHVTLQILWDEYIGLHPDGYRYSRYCDLYRAWALKLPVTMRQDHAAGEKLFVDYAGDTVTVVIDRLSGKTRQAHLFVAVLGASSLSFAHARWSETLPDWIECHLLALEAFGGAPALLVPDNAKVAVIKACHFDPQVNRTYAGMAAHYGSAVLPTRPRRPRDKERTSRCTLLEWLSDN
921302..921679                     PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; NGR_b09310; phage(gi17546153)     1.67e-09            SinorhizobiumfrediiNGR234MSAPSSGTRTFHMIEAVAERLEGAPRQLRRRWSDEFKSQVVAEALEPGASVSAIAHRIGIRPSQLFAWRRDALDHAASQRSAGEVASARPAAPVIEVVIGDIVVRAGADVDEAHLQRVIRAVRSA
921676..922020                     PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail tip protein; NGR_b09320; phage(gi100054)     1.87e-21            SinorhizobiumfrediiNGR234MIPSGVKVFLASHPVDFRKGPDSLLSLVRDAGSDPFNGALYVFRAKRADRVKIVWWDGSGVCLYAKRLEKSQFCWPRIGHNRVQLNHAQLLALVDGMDWKRVRAVPVKPPEIVG
922095..923555                     PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail assembly protein; NGR_b09330; phage(gi100053)     2.17e-71            SinorhizobiumfrediiNGR234MTPPDLDLPDDVEALKAMVFAMAEKAARADALESEVADLKARNADADERIERLTQILKAFDRARFGRRSEKLGSPSTDDEQQAFVFEEIETGIAAIRAQVNKGRERPEGKRPPRPRKGFAPHLERVEVVMEPEELPEHAGKQKVLIGEDVSERLDVVPAKFRVIVTRRPKYAFKNEDGVVQAPAPAHIVEGGIPTEALLAQIAVSKYADGLPLYRQEAIYARDKVELDRKLMAQWMGKLGFELEILADYLFDEIKKGERIFADETTLPTLAPGSGSTKTAYLWAYARDDRPFGGSGPPMVVYRFEDSRAGECVARHLKGYRGILQVDGYAAYNKLVRSDRGNDGVTLAGCWSHSRRKFYELHVAESSKVATETVERMAKLWQVEETVRGQSPDARVAVRQQTSAAIVTELFALWQKTLPRISGKSKLAEAIRYAISRRAIFERFLADGRIELDSNIVERAIRPQAITCALRKNWTLIPLNPGQQFH
complement(923602..924393)         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; NGR_b09340; phage(gi557307613)     4.59e-30            SinorhizobiumfrediiNGR234MKEARMLTNPTLDQMQALGLTGMAAAWRELTEQSGTNELSRDEWLGLMLDREVTLRADKRIRNRLASAKLRFAQACIEDIDFAAARGLDRRNTMALAQGQWLTAHEGLIITGHTGTGKSWLACAFGRQAARLGHSVLYVRVPRMFEELALARLDGSFPRLIDRLTRVQLLILDDFGTHTLSDQQRFHLFEIVEERYQRKSTLITAQVPVASWHDLIADSTVADAILDRIVHNAHRITLRGESMRKQKSAPLLTGAENGEINQP
complement(924390..925940)         PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NGR_b09350; phage(gi557307612)     1.80e-15            SinorhizobiumfrediiNGR234MPRRKQARRTTVRDIRTILRLTHEEGLSVREIAERLKIGKSSVSTYLLRSREAGLSWPLPIGADEDAKLERRLFGRAGRPPRDLSEPDWALVVRELKRKGVTLTLLWQEYRASHPDGYGFTWFCEQVAAFRQRTSVAFRNRHAAGAVMQTDYAGPTVPVIDPATGVIHPAQIFVAVLGASNLTFAHASFSQQLPDWIDGQVRALTFYGGVTKAIVCDNLKSGVAKALWFEPTLTATFAAMAEHYDTTILPTRSRKPRDKGRVEGAVLIVERWILARLRNRTFFSLAALNTAIAELLEDLNNRTMRHVGKSRRELFEEIERPALKPLPAIPFEYAEWKSAKVHPDYHVEVDKTFYSVPHRLIGCTLQVRLTHRVVEIFHDHQRVASHVRRSQRSGHVTVNDHMPKAHQRYANTTPANLIGRATQIGPNAAILVERMMRDRPHPEQGYRSAMGILSLAPRYGSQRLEAACERALTINAITYSSVASILKSGLDRERPQAEHAAPTPAHTNIRGRSYYQ
926104..926316                     PHAGE_Stx2_c_Stx2a_F451_NC_049924: tail assembly protein; NGR_b09360; phage(gi100053)     9.98e-10            SinorhizobiumfrediiNGR234MPKPAITRKNSLFAGSDGGGRSWATIATLLQTAKMNNVDPLAWLTQTLERIANGWPSSEIDALMPWNYAD

#### region 2 ####
970272..970283                     attL                                                                                 N/A                 GAAGGCGTCTGG
complement(971122..973206)         PHAGE_Clostr_vB_CpeS_CP51_NC_021325: putative resolvase; NGR_b09950; phage(gi509140068)     2.30e-11            SinorhizobiumfrediiNGR234MSTDIAIKVDADHLRRDAFLYVRQSSLRQVFENTESTKRQYALRDRAVALGWPIERVHVIDSDLGLSGAQSQDRDGFQHLVSEVAMGHAGIVLGLEVSRLARNNADWHRLLELAALSRTLIMDEDGVYDPAYFNDRMLLGLKGTMSEAELHILKSRLQGGILNKARRGELEMPLPIGLVYTPDARVVLDPDRQIQDTVRLLFDTFRQTGSACAVVRRLRGEKILFPRRIRRGIGKGDVLWNEIDHSRVLQILHNPRYAGAFAYGRTRTAYNAKLKPVQLRVARSDWQVLIPDAHDGYISWAEYERNQAALEQNATGFSPGLRGRMPRQGSGLLQGRLLCGRCGARMRVHYEPFEGRLRPYYVCNEAVVRHAGKHCQWVRGAPVDEAVSALLLEVMAPAAIDVALAVQQEITQRVEQAAALRGTQLQRARYEAELARRRYLKVDPDNRLVADALEADWNARLRDLDALQREHERQNEADHSLLDEPAQQRIRALTADFPRIWNDERTGAVERKRMLGLLIEDVTLLVDDEVNINIRWRGGRTQSLSVARPRPMSVIRKTPAQVVALINELLEATNDRQIAARLNELGHRNWRGEPFTPKKVMLVRRTYGLKSRYERLREGGMLTGEEVAQQLGVCESTVHQLGRKGTLKRHRYASNHRYLYEPPGNVRLEKGAGSRYGGRQPRLIVAQPLQQGAS
complement(973482..973931)         transposase number 2 for insertion sequence NGRIS-4g; NGR_b09960                     N/A                 SinorhizobiumfrediiNGR234MPNETKRERLRELGALNARPEAVRAPWFRESTFFDPLDLVQVKYEMLRHVQEDGVNKADAAALFGLSRPTYYQAEAAFERDGIAGLLPRTRGPKSAHKLTDEVMQLIEQNQHAGAPLQARSLAELLHSTLGISVHPRSIERAIARKKKR
complement(974122..974391)         transposase number 1 for insertion sequence NGRIS-4g; NGR_b09970                     N/A                 SinorhizobiumfrediiNGR234MRIEFEVTHPFHPWRGQRFVLSTRKQNWGEDRVMFYDADGRLRSLLASWTDVAAPDVFIQIAAGRSFVRPDDLATLAALIEQIERSHGG
974439..975212                     PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; NGR_b09980; phage(gi557307612)     2.38e-10            SinorhizobiumfrediiNGR234MEAAVRIVERWLLGRLRHRIFYSLAEVNAAIGELLHDLNDKRVLRRVGATRRQLFEELDRPALRPLPVERYVFAEWRIRRAGLDYHVEIERHYYSVPYRFAREQVEARITANTIEIFHKGERIAAHRRSSGNGKHTTIPDHMPSAHRRFADWTIERIQREASAMGPDVALLCERILADRPHPEQGFRACLGIIRLNKSFGRDRVNAACSRALEIGARTYGSVRSILDNHLDRTAASNGAASHEPIHHANIRGPRYYH
975225..975962                     PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; NGR_b09990; phage(gi557307613)     1.43e-35            SinorhizobiumfrediiNGR234MLAHPTLDKLNAMGLAGMAKAFSELVGNGEAEHLSHAEWLGLLLEREWSSRYDRKLAARLRFAKLRHQATPEDVDYRAERGLDRALFMKLLAGDWINAHDNLAICGPSGVGKSWLACALGHKACRDDRSVLYQRVPRLFAQLALARGDGRYARLQRTLGHVQLLILDDWGLEPLNEQARHDLLEILEDRYGRRSTIITSQLPVSAWHGVIGDPTYADAILDRLVHNAHRIELSGESLRRNLPRKA
complement(976104..976622)         PROPHAGE_Shewan_MR-1: putative transposase; NGR_b10000; phage(gi28275189)            4.25e-23            SinorhizobiumfrediiNGR234MIEVWFQDEARIGQKNKITRRWATRGSRPSAPHDQRTRSAYIFGAICPSQGKAAALVMPWCDTHAMNQHLIEISRNVADGAHAILIMDQAGWHMSNNLMVPENITILPLPPKSPELNPVENIWQFMRENWLSNRVFKSYQDIVDHCCHAWRTLQDRPWKIMSIGRRQWAHGF
complement(976619..977164)         PROPHAGE_Shewan_MR-1: ISSod10, transposase OrfA; NGR_b10010; phage(gi24371809)       4.26e-10            SinorhizobiumfrediiNGR234MGSAISLRSDFDGNRLRLLARQTKDASQARRFLALASIYDGGSRADAARLGSVTVQIVRDWVVRFNARGPDGLINGKAPGKPSLLNDDQRAALAQAIERGPTPYLDGVVRWRLCDLARWLWAEFGVSVSEQTLGREVRSMGYRKLSARPRHHAQDADAAEAFKKTSPPQWQKSPLAPPRVK
complement(977471..977827)         PHAGE_Burkho_ST79_NC_021343: HicB protein; NGR_b10020; phage(gi509141623)            3.66e-35            SinorhizobiumfrediiNGR234MNTMTYNGYHARIEFDAENEVFFGKIAGISDVIGFQGDSVAEIKKAFHEAVDDYLETCRKIGKESQRAYSGKIMFRVAPDVHRRAALAAELSGKSLNQWAEEVLQEAADHFAEARISA
complement(977824..978078)         PHAGE_Burkho_ST79_NC_021343: HicA protein; NGR_b10030; phage(gi509141624)            9.96e-22            SinorhizobiumfrediiNGR234MNSKQRKTLAAVFKDPVSGTIEWVAIENLLVAAGANAIEGNGSRFKFEKDGIIASFHRPHPDKEAKRYQVRDAREFLMQIGVTP
978650..979099                     PHAGE_Caulob_CcrPW_NC_048046: major tail protein; NGR_b10040; phage(gi100289)        1.59e-23            SinorhizobiumfrediiNGR234MSSNLSARRRPDPIDSHVGQKIRMQRLLLHMSQTELAKALGVTYQQVQKYENGRTRVSASRLQAIANVLEVPLTFFFESSASDHSDDAGLAASRSTVEFVSSPMGLALNRAFSRIADVRVRRSFLGLVQRLAEDDGTHAGSFASSPPGQ
complement(979079..979240)         hypothetical protein; NGR_b10050                                                     N/A                 SinorhizobiumfrediiNGR234MPTNPSSALGLVPTERHNRGKYPPMSSADYWTILWIMLSLAFGVFLALLTRRR
complement(979306..980163)         hypothetical protein; NGR_b10060                                                     N/A                 SinorhizobiumfrediiNGR234MSSQKGGPPINETRRHILGLTIAIGARMAAMGSLAGTFLSSPAKAGGKAWWKIGGSNPGKGHGNGNGKGGNGGGPMCLLRGTSIMTPSGEVRIEALRIGDLVATVRGPAMPIKWIGRHVYRRSGPMWHKNVVPVRIARLAIDGQRPHKDLYLSAGHALYLDGVLIRATDLVNGTSITPALPDARDTIEYFHIVLDTHEVVLAEGAPVETCLLEDCNYEGFTNFVEFSRLYPADHSSKMTPFAPLVGYGGREHLKALLRLASGRLVRASPLQYTYERLAARGEELG
980289..980597                     hypothetical protein; NGR_b10070                                                     N/A                 SinorhizobiumfrediiNGR234MNLRSRRLTLTGTLPGTRIAEDIARNLLAGKELQTITLSMCSMRPLPPRHGESELAAPAIVLALAIAATEWLYQLRQYARHREDVCYVEGYVIQRQKPSWIA
complement(980750..981301)         PHAGE_Arthro_Judy_NC_048095: hypothetical protein; NGR_b10080; phage(gi100036)       9.33e-06            SinorhizobiumfrediiNGR234MPAIVDRRDRALLLTAFAAGGRRRSEVAGLRVEDLTDEEPVRADRADKNSPACLSIRLGRPKTTTADDDEHVLLIARPVTVLKQWLTEAQINDGPLFRRIDQWGNVDRRALTPQSVNLVLKRRCQQAGLDAEKFSAHGLRSGYLTEAANHGFPFRSDAAVAAQVGDAGGELLQQRRSKEMSRC
complement(981307..981900)         DNA integration/recombination/invertion protein; NGR_b10090                          N/A                 SinorhizobiumfrediiNGR234MIDDHRVAGSDSQAVHRRAEELDALDAILPFDRRDQLAALLTDEDVATLKRLASEGMGDNTLRALASDLGYLEAWCRLATSTPSPWPAPESLLLKFVAHHLWDPAKRAEDPAHGMPADIAAGLRAERPLRAARPACARHGAAAADLVVDPHPLARSHRRLRRAVAEERTPTGGQGEQPATAEEEQEGGDGRRSGRAA
981971..982246                     hypothetical protein; NGR_b10100                                                     N/A                 SinorhizobiumfrediiNGR234MALTVTAAVTSKGFGAYHDAAVREPVIITKNGRPRTVLIAYEDYLRLSRRGRRVEATAELGGADLAAVDKFEEPGLDRLNAERLTDKHAAD
complement(982301..982687)         hypothetical protein; NGR_b10110                                                     N/A                 SinorhizobiumfrediiNGR234MVIDTSAILAIAFNEPEAETYEQKVVDAPRRFISAATVLELAIVIEARLGEAGAAELDLWLYKAGVEVVAVDAEQIAVARRAWRSYGKGRHPAGLNYGDCFSYALARTRNEPLLYKGDDFSRTDIQAA
complement(982687..982941)         hypothetical protein; NGR_b10120                                                     N/A                 SinorhizobiumfrediiNGR234MALSIKDLETERLAKALAEKTGETITMATRRALEERLRRLANAGNRDVLLEELAASRKRWARLPVADNRSADEILGYDGNGLPN
983141..983152                     attR                                                                                 N/A                 GAAGGCGTCTGG
complement(983263..983391)         phage integrase; NGR_b10130                                                          N/A                 SinorhizobiumfrediiNGR234MSGRQKSTTVQKQLGHASAEMTPKYQRRRDSFQVNLTKASGL
983451..983726                     hypothetical protein; NGR_b10140                                                     N/A                 SinorhizobiumfrediiNGR234MSVKSSISLTDQQDAFARSLVESGRYSSMSSVLQQGLELLRQKTETETVETAALRELVQRRLNGPMISATEMESRVAAMIERKRRIVRVDS
983689..984057                     hypothetical protein; NGR_b10150                                                     N/A                 SinorhizobiumfrediiNGR234MSGSDGLFVWTLEYSEDAERDFELIFDHLFDAYVELGDSPDEAVERSAERIHKLRVEIVRLVDTPYIGTLRPDIHPGIRFLRRDKAAIWFLPVEHSRTIIVAAIFYGAQDHIRNMLAHMLAG
984280..985638                     PROPHAGE_Xantho_33913: IS1478 transposase; NGR_b10160; phage(gi77747808)             5.38e-108           SinorhizobiumfrediiNGR234MGKPRERRQTGEQDLFRSRLDQIINMKHELVRLAQAIDWPVLEARFGTVYSDGAGMPPLPTRLMAGLAILKHTFNLSDEALCERWVENPYFQYLCGEEFFRHELSFDRSSMTRWRQRMGEERIGALLQESLAVAVKTGAMKPQDTRQVIVDTTVQPKNVMFPTDAKLIHRARERLVRLAKKMGLDLRQTYIRVGKFALIQHQRYAHAKQFKRAGKALRKLKTYLGRTVRDIERQIAGDEQLDAIFKWSLYQAKTVIAQRQRQRGRKIYSLHADEVECIGKGKAHKPYEFGVKVSVATTLNRSKGGQFALHATALPGNPYDGHTLATVIPDMEKMIGNELSRILADAGYRGHNAPESHKLRVFTSSQKRRLTPAIKRQMRRRSAVEPVIGHLKSEHRMDRNYLAGEQGDAVNAVLAAAGYNFSLLLRWFRQLLCLFAALLLTFQSRPTPQQTA
