gi|238897251|ref|NC_012751.1|  Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), 2110331, gc%: 40.32%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

#### region 1 ####
890223..890234                     attL                                                                                 N/A                 TTAATATAATTT
901822..902016                     PHAGE_Entero_mEpX1_NC_019709: putative replication protein DnaC; HDEF_0881; phage(gi428781919)     2.21e-07            CandidatusHamiltonelladefensa5ATMNMPVLNQPANAQARQCLHVCQTYAETEHWPARFAQGGGWVLCGRLARGKIIWPSNMVCTEGRS
complement(901926..902042)         hypothetical protein; HDEF_0882                                                      N/A                 CandidatusHamiltonelladefensa5ATMTLSMSDNIQDLPSVQTIFEGQMIFPRARRPHRTHPPP
complement(902151..903455)         hypothetical protein; HDEF_0883                                                      N/A                 CandidatusHamiltonelladefensa5ATMQKTVNTTNSPAIHHHTPTSKPNKLSRFLKALRKVSNDICTRFVDLFRCCFSKTPKNPQGQAKIDENDRAEKLEKILQKISARKIQQYYRAHVKRVKEAPPNDYGIVSSQPYDGTKPEHIGRTYHFQIKKDGQNQKKILRVMYSPTKGPDSPMEGGFKSIDRIDKKFVRLKIVKGDSFRKEINNNDDLEGTSTVILGIAVDSDTMIARFGGDSLSDYLQNISSINPAHFENAVKDLQTLHKRNTYLIDIKLANLTYDGKNVNFIDVDNRVRIDPKKPNITKFNITLYYTTTKLLRVLIPDFFGDGSGSFSLGPKTDAEKKSYFKVSDEYAFLLAMIIATSKKDDLKRAFYGRNVGVKKNREFHGVMNNDNQSYFRNWIQAHVKPKFHSNIASILRDPYEYAQKSSNPPYLSDMLLFKGSMLKGVCRNFWVNSSM
903750..903959                     PHAGE_Edward_GF_2_NC_026611: hypothetical protein; HDEF_0884; phage(gi764162319)     5.45e-15            CandidatusHamiltonelladefensa5ATMSADFKTPFRYTGISQEEADFLTHHYQQRGYRMKKYLNEDMTLWDVVVSLPERRFHRKTPASMLNPLWR
903962..904237                     PHAGE_Entero_cdtI_NC_009514: holliday junction resolvase; HDEF_0885; phage(gi148609431)     4.38e-16            CandidatusHamiltonelladefensa5ATMRIELPFPPSVNHYWVRTARRVYLSEAAKRFQRLTAIEVAKSSMKQGHRSFPGDVSVALTHLPDKRVRDVDNYPKGVLDALTKAGIWSDDA
904244..904339                     hypothetical protein; HDEF_0886                                                      N/A                 CandidatusHamiltonelladefensa5ATMMTVKKKDPHSDIKGGKCVVVIEQYIEEAAV
904453..904731                     hypothetical protein; HDEF_0887                                                      N/A                 CandidatusHamiltonelladefensa5ATMLPDNEAQIVDRAVARLKHFDSLGYDIIVACYRGKVSCRAIGRALKRDHKSISGYLTRSEAYIAGQVDALLNVKAKFTQIETIPILKLKNVF
complement(904728..904820)         hypothetical protein; HDEF_0888                                                      N/A                 CandidatusHamiltonelladefensa5ATMLKNLKNLMNQQIPLDFNLHFKKLKTINED
904838..905083                     hypothetical protein; HDEF_0889                                                      N/A                 CandidatusHamiltonelladefensa5ATMLNINVQKLEKPKYECLIMDAEEAKKNGLDFFNLSANEGNDYLLLKEGISGFSGVDICSIPTNTSSYFAYSIINPLTFVSA
905288..905626                     PHAGE_Entero_HK022_NC_002166: holin; HDEF_0890; phage(gi9634153)                     7.49e-08            CandidatusHamiltonelladefensa5ATMTMPEKEPGFWVALLAWIRGHQADFGYASLAALFSLWRNAWGKHAWSRRLLDALSCSTLAFFSQPLLMMVEGLFHGTLPASAPQVLAIYIGYVGTDYIRARIQSFTQRKNGE
906110..906499                     PHAGE_Sodali_phiSG1_NC_007902: putative phage endopeptidase; HDEF_0892; phage(gi89885988)     2.82e-09            CandidatusHamiltonelladefensa5ATMRWTIPGMIMVLLASLLSVAVYYRHQYQQSEQALQKAVLELVQHQASLKQLRQKIKTVSQLDAQHTKALEHNKNLVAQLERDVADGRRRLRVKATCHDLSTNTTPPDLLTPLNGIISSSETESTSPGSK
907168..907536                     PHAGE_Salmon_ST64B_NC_004313: Tail tube protein; HDEF_0895; phage(gi23505459)        1.81e-07            CandidatusHamiltonelladefensa5ATMADTTGLLAGTAYVTVDGLTVMVEGSFKYKPTRVKRETLTGMDGVHGYKEKPSAGSISMSLRDSRGTSVIGFNNQTNVTVVAQLANGKTIIGSHMWTVDEQEVDSEDAKFDVKWEGLSVTEN
907692..907802                     hypothetical protein; HDEF_0896                                                      N/A                 CandidatusHamiltonelladefensa5ATMTHFYHWGPYEAGKLPARRFLFWYLQMKRMGGGVHG
907795..909684                     PHAGE_Salmon_epsilon15_NC_004775: minor structural protein; HDEF_0897; phage(gi30387394)     1.17e-15            CandidatusHamiltonelladefensa5ATMGEQFDFDLVANDDASKQIDHIIRSVQSLYPPLDKLKGGLKLGGQDTLNGLESITGQFKGLNTFAKEGVQLIGDMVPPLKMVGGLSLGIGAAAAGMYKTVTGMREAGKSAQELSTSAQNAGLSVEKFTQLSGAMQILGMDADSAKQSVEGLYGVFNDALQGRSHDTLSLLNQIGAQIAKNNDGTADLTGTMRHLSRVFPALSSQNQKKVSDRLGLDANSLKLLRTGNFDELMSQSKDFGLTVPDGLNDDLTGINGAINEMGAAWDGLKQKTRGGFYSLLLSDGSVKDGMEGITDILTHGPDNVALMHALGVTRGDESQQLRKEYNDPEFYKTLTITEKTAMDFGVMTDGLREKFQAYYGPKEMANQLASDLAVALQRPNSTGVNSYQGVNIGQPSAGVNPRARSVRNNNPWNINYARQQGAVMEPGAGGSALFAKFETPEVGIDAADRQLMLYYTGQSKAAGNRPLTTIEQIISTASPLSDGNNTRAMISGASRELGVNPGDQLNLTDPALRARVLTALFNQEGNNPWSSEQVKSVISGAPVSQVQNRTENNNVSNTSTVNNNSKSSTSTVNNSKSQDHSQGIAEAVREGLSNTKLQVEVTMVDPRTHQQTQTTGTTGGRVALSMPFTG
909687..910988                     PHAGE_Salmon_ST64B_NC_004313: tail/DNA circulation protein; HDEF_0898; phage(gi23505461)     1.17e-33            CandidatusHamiltonelladefensa5ATMRLINTVTDFFDPEGSEKWFETLQKAQFRGVPFAVLGGKSSFGRKTAVHEYPYRDKPWVEDLGRATRQLTVKGFLVEDSVIYGGGAVIDQRSNLIAACETAGAGTLIHPTYGELTVSIPSGGLKIVEQWDNGRYFEFTLRAIESGLKVFPVTTSTPLPDEESWLKSIATTTLQFVTTVNSILRKSTALIQTLQSTAVFWVSQVTGTLNQANNLINTMTDVFDSNHYGRFQSSGNSGLASHQTYPVLMQKQKAASAQNRGKVATVGDELTQSVDAETYAGVANALLSAVVLSVSEPQDQIRIFIHLSVFETGNDVPGVDDAVQDAAILLFQRLALACLGRAALSYQPVSPDDAWDMMTLAGEALEVGAVNAADMVHDDTYRDLIALHNTVVSTLTERGANLARFTEYQFDTSLPSLVLSERIYQDPARNYATGF
912848..913759                     PHAGE_Shigel_SfIV_NC_022749: baseplate protein; HDEF_0901; phage(gi557307544)        1.28e-24            CandidatusHamiltonelladefensa5ATMGEDYRIGSRLWLIYRQRLSRDTAGAVINRKDGIKYTLNNSVTIGLDGTALTPVTAVLVSPLDDPAAGGALGNAPVGTVLTLDNSYSGVDSQVTLMNPATGGANVETDGPLRTRMLLAYQALPQGGSETDYVNWALAVSGVTRTWCVRRLMGVGTVGIYIMCDGDDQTNHGFPAGTDGLSHYEDWGSYAKATGDQLRVADAIYPNQTITALVYVASPIPKVIDFAITGIIEQEQDLTAAISTAINLVFFTRGDPAGEGIVTLSSINAAIASAPGTDGFLMTYPTQNITLGVGELPQLGTVTIT
914405..915106                     PHAGE_Entero_186_NC_001317: tail fiber protein H; HDEF_0903; phage(gi9634074)        1.38e-11            CandidatusHamiltonelladefensa5ATMQKIGDITNTATPDGEFTNGNVAGGVSPTLLPAKWFNTIQRELCHVITKNGGVLNPDDDTQIFEILNSVFLSQKQNGSDIPDKHQFIENLGLSETVDCAKNALDKRHGGEVQGQIQVNDTLRVSKNGKTATYQEDGNIDGECWGGLLNQWITTKITEAVQSRAPWEEVNRTFVRDIRLSSVQLMSVQTYDRQLSAGAVVTGFKTDGLWEIKSYAYYRFIQKNINGQWITVGQG
915111..915647                     PHAGE_Escher_pro147_NC_028896: tail fibers protein; HDEF_0904; phage(gi971753728)     5.16e-31            CandidatusHamiltonelladefensa5ATMKMYKNFNKTDIEALSEKQRELKYNINASYLQDENGDDWYDLQKTFQPDTFKVMFDEKNTVVSIARDASTLFPLNCNIVELDSLPEGAENNGEWIFDGHQVVRGTYTEAERTRQAAREKEKWMDRASKAIGPLADAVELGIATEQEVQALKNWKAYRVALHRLDPKAGEITWPEVPRG
complement(915716..915961)         hypothetical protein; HDEF_0905                                                      N/A                 CandidatusHamiltonelladefensa5ATMNVNHSTSNQPLLRDDKVYNDSQERPVGIATQIDKVTNCVTDPKTDSTKIPTMTPEDKSKMDELFNRCFNAGEAISKALKQ
complement(916180..916881)         hypothetical protein; HDEF_0906                                                      N/A                 CandidatusHamiltonelladefensa5ATMSLITNTTIRNILGINFSESELKLLESKRLTPTSIKNSPRLLKRLERTHKKTFNENKKVAIKTFIKELTVSKDKKIEQNPHFLSDKNITIFPSFQDLKPLKIDSQAKNIKQGHCPQEKKFCVTINQKNLGSILSDDRYVFIVVPSLNSKTKFEIISTCEGQFSSDGKRIGHVSLAMSESGRLDVYYAGMFEVENGNINNWSNESGHYKTDMNIHKKVARYMSAFPPEKFKEFR
917080..917214                     hypothetical protein; HDEF_0907                                                      N/A                 CandidatusHamiltonelladefensa5ATMYKVFFYENFHIIYFFIAKTRNVGIQTFKYHLRFLNPVLDNLFY
complement(917408..918613)         PHAGE_Burkho_KL3_NC_015266: gp47; HDEF_0909; phage(gi327198092)                      0.0                 CandidatusHamiltonelladefensa5ATMSAHIPREQDMTHAQPPERLRFIQPMPEPVLRDLLQQPAARTKKVSPRFRFIDLFAGIGGIRMGFDAQGGECVFTSEWNRFSKKTYIQNYGAPHPFVGDIVPYPAEDVPDHDVLLAGFPCQPFSIAGVSKKNSLGRPHGFECTTQGTLFFDVARIIATRRPWAFLLENVKNLLSHNKGHTFNVILQTLRDELGYDVHYRVIDGQHFTPQHRERIIIVGFREKTGFSWDDLKLPEEGPRLASILHRTDGTEPVLPWDGERFFDHDRRAVPLRYTLTPNLWAYLQAYADKHRAAGNGFGFGIVYPDSVTRTLSARYHKDGSEILVWQGSNKRPRRLTPRECARLMGFPDAFQIPVSDTQAYRQFGNSVVMPVMQEVARIMTPHVRAQIAHERDGTSLALPLFS
918604..918717                     hypothetical protein; HDEF_0908                                                      N/A                 CandidatusHamiltonelladefensa5ATMRTLIRARLDVWGDLAQQTGGKSTQDTRGTIGVKYHF
complement(918937..919587)         hypothetical protein; HDEF_0910                                                      N/A                 CandidatusHamiltonelladefensa5ATMRPISSTSSTSSTSSTSSTSSTQKFVKSIQTVSNSTSSIPHHISPNPKSSRYIEDSKNFFHKETKTKPNQITSFNKKNKGHFENKYKSHKWTFIKNYREKELPVFANEVTAYQYKIIAQKQGFYGELPQLIKRKNVENNETLDLTKGKEGDELLNIFFEKTPNGKSTKRIMDDFGLRATAVRRGTDSYLKRFLQEPFLVADFYIDVESVNSKLTTK
920771..921160                     PHAGE_Sodali_phiSG1_NC_007902: transposase; HDEF_0912; phage(gi89886005)             3.63e-41            CandidatusHamiltonelladefensa5ATMLPDHIRRRDMLELAVELANLIEKWKYSKEQCKSLLYYIAQAGNTIDGEGFIRTLAEKAPTYREDFMTIAEQLEAKGEARGIQQGKQEGYQLGRQDANKELAQQLLSDGIDRTNVKRYTGLSDSELDQL
921229..922113                     PHAGE_Vibrio_K139_NC_003313: hypothetical protein; HDEF_0913; phage(gi17975108)      1.41e-45            CandidatusHamiltonelladefensa5ATMEKFNRFNYFRNRDKHFANLISIIDGIICDGCVNSQEILYLDTWLLNANEISDNFCFKSIRRRISDVLADETIDSTELNEIKKDLIIIQKNLLELPYLHLNSIESDRHLFEGLCKGILSDKELNDSEIKYLKWFLSKNDNLKKNYPGKIIYDIVKYILQDSIVTEEEREFLRKTLISFTGCDIESGVVDGFATQLPIDIINKFEASGKTVCLTGEFIYGKRSVCEQEIIRQGANVIGNVTKKLDYLIVGTMSSKNWRYTSHGRKIEKAVHYRDEKGIPLKIINEEQWQDFSYSN
922228..922812                     hypothetical protein; HDEF_0914                                                      N/A                 CandidatusHamiltonelladefensa5ATMKNIDDYLNKHLFWKVSFKDILVCIIFFILMFMLVKCKRSTDNIVTVPTDSDVISKPIHNWLKPFIIESYGLKDGVLIIKMKTRRVANEIDEEYSNATVHFTTFCYINYNDEITKRALNGEILSDLERDNFLIKKEIQDAPPIKKIIFITPSKNEGTIVSTINAGSNECKKIGKMDNDKKSKYMEKLIEVEKHY
complement(923127..923690)         hypothetical protein; HDEF_0916                                                      N/A                 CandidatusHamiltonelladefensa5ATMLNKGINSMEYNFEVAGIYYDNKDGTSRKDFIKKHLDIDDYTKINVSLIRHGGNKHDRNAIGVYISKSGFFGFNNLMIGFVPREDVKEISPMLKEGGEITSTEIYKVWLPSWSDNATPYVHITINTNWTENDVEEMYKRIKDERRKKRLGKRSMSSATDKNNVIIKKVINYILNIAILIAVYFLIFK
complement(923737..924063)         PHAGE_Entero_WPhi_NC_005056: C; HDEF_0917; phage(gi33438928)                         1.91e-23            CandidatusHamiltonelladefensa5ATMSSEYGKKLKDIRHAEGLTQPEFSALTGISLGAIRNYETGQSGVGLNVIDKIVKHPKLNKYTMWLMSDKTAPNAGQIEPAFSLSGSEVSERRIKENPSIRRRMIVSTT
924262..924534                     PHAGE_Entero_WPhi_NC_005056: Cox; HDEF_0918; phage(gi33438929)                       4.64e-35            CandidatusHamiltonelladefensa5ATMIKSDYTGQYPVEAVTIEKFAELIGKPETAVRKMITNNKLPVVELTDPEAAAARVGERWVVISEFNCIVREAYFNRPAKERGAWLKWLGL
924860..925294                     PHAGE_Aeromo_vB_AsaM_56_NC_019527: putative single-strand DNA binding protein; HDEF_0919; phage(gi422937500)     9.95e-25            CandidatusHamiltonelladefensa5ATMIDIINHKRDNIMTINTVIFSGNLGGDCTTRSTANGKLIATFSLPVKQGYGEHEKISWVQCRMFGVKAEKLPIYLTRGTKVTVIGQFLLESWTGKDGIEKTTAVVLVNEMDFSSKQENKLQQNQPLASQTESATSHQLDDDIPF
complement(925303..925623)         PHAGE_Sodali_phiSG1_NC_007902: hypothetical protein; HDEF_0920; phage(gi89886010)     2.79e-33            CandidatusHamiltonelladefensa5ATMGQVAFDTQEFVETLENAGLPKEQARAISIAVRKSHEVADVATKTDIAEVKRDLEDIRKDLSAEIAEVRKDMENRFDKLGLQLTVRLGGMLILAVGALTAILKLVL
925768..926622                     PHAGE_Cronob_ENT39118_NC_019934: phage antirepressor protein; HDEF_0921; phage(gi431811054)     1.19e-57            CandidatusHamiltonelladefensa5ATMQTELITIDSNQLPIIEWKNIRVVTTETLAKGYGASMKNIQANLANHKSRFVEGIHYFKLEGNELQQFKRVPDNIGLVSKYTSQQILWTEKGAARMSKIVDTDEAWSFFEKMESAYFNQKSLPNDPTTLGLPNFLDPAESEIAWAEQHKKVQLLGVQVQQLETEIDCLQNLLQVGMSPVQFCKQLNGVNINQVNLFLESRHFLYNAEKDIYKSHVWRVQAYSRDKYLTESPYIATTGFGQRQCYKIVLLKKGASWLYQQYLKDKLPMKKDWNGQFTHEKYGQVA
926738..927457                     PHAGE_Entero_YYZ_2008_NC_011356: DNA-binding protein Roi; HDEF_0922; phage(gi209427760)     3.24e-45            CandidatusHamiltonelladefensa5ATMVPNMNLIISKLQMISLEIAELVGSRHDKVKQSIERLANHGTIQLPPVRKVENKQSNSPNRFTEVYMFQGEQGKRDSIIVVAQLCPEFTARLVDRWQQLEQEKLLGFNPNDEIAVLENLLQEKKHNKELTHKIEEMKPDVAALERIARSDDAMCVTDAAKQLQLRPKDLFDFLSENKWIYRRLGSPWIAYQDKIQQGLIEHKVTTITHTNGINETKTQVRITPKGIAKLAKLSNLEIAA
929303..929656                     PHAGE_Entero_mEpX1_NC_019709: putative replication protein DnaC; HDEF_0924; phage(gi428781919)     2.51e-19            CandidatusHamiltonelladefensa5ATMPQIALYGKEIETKTECPACLSEKLSELQQAEAEQEKYRKRSKIKTLMDNLNLPERFSDVTLDNYESVNPDAARCLKLCNDYATHWPVCSGQVKQASILCFFQYNRCGSFGVHPPLY
complement(929638..930102)         PHAGE_Shigel_Sf6_NC_005344: putative transposase OrfB; HDEF_0925; phage(gi41057343)     1.33e-62            CandidatusHamiltonelladefensa5ATMSASVFCGCPSSDVTYLWAGNRWTCLAVLIDLFARKPTGWALSSSPDSEFTCKALWMAYESRGRPNGVRFHSAQGCHDTSLTFRQPLWRYRMTQSLSRKGHCWDNSPIERLFRSLKTEWVPKAGYPTQQEARRDLVDDLIGYYSQTRPHQYNGG
complement(930397..930654)         PHAGE_Shigel_Sf6_NC_005344: gene 56 protein; HDEF_0926; phage(gi41057344)            2.74e-11            CandidatusHamiltonelladefensa5ATMTKQGYRGIEGAKAMGVSIIALRDGVRRSMSEKSGQTISQGKTMTADQQRIQELEAKLRKVEREKDILKKASSLLMSEFLNTSRE
930825..931046                     PROPHAGE_Brucel_1330: transposase, putative; HDEF_0927; phage(gi23502708)            9.40e-18            CandidatusHamiltonelladefensa5ATMWIEVSRIKYLNNLVEQDHRGIKRITQSTLGFKSFKTAEATIAGIELHPMLKKGQLENPGTIPAWKQFYSLAD
933797..933808                     attR                                                                                 N/A                 TTAATATAATTT

#### region 2 ####
988285..988506                     PHAGE_Edward_GF_2_NC_026611: hypothetical protein; HDEF_0998; phage(gi764162319)     1.47e-16            CandidatusHamiltonelladefensa5ATMSISLNTPFRYTGINSEEADFLTHHYQQRGYRMKKYLNEDVRLWDVVVSLPETARFPKTPFSMLNPLWRWHEN
complement(989003..989407)         ISHde1, transposase orfB; HDEF_1000                                                  N/A                 CandidatusHamiltonelladefensa5ATMPRLYGYATRGQRCFGTHDWQAKGRTNVIGALLGVTLIAVGLFNCSINSDVFYAWVTQLLLPALPHPCVMMMDNASFHKRKDIQHAILNAGHSIEYLPPYSPEFNPIEHTWAQAKRKRRELQCDINTLFSEHIM
complement(989448..989825)         ISHde1, transposase orfA; HDEF_1001                                                  N/A                 CandidatusHamiltonelladefensa5ATMSYSVDFRQKVLSIREKEGLSIRATAKRFHVGTDTLRRWLKRIEPKPSGPRRGKMDKEAFIKDVAEYPDSYQRERAARFGVCPKAIWQALKRWGLTYKKNSASSQGKRRGTTGVPGKNRGVSKAG
990267..990632                     PHAGE_Entero_HK022_NC_002166: holin; HDEF_1003; phage(gi9634153)                     1.57e-06            CandidatusHamiltonelladefensa5ATMSPCSPPMTMPEKEPGFWVALLAWIRGHQADFGYASLAALFSLLRNTCEKHPWSRRLLDALSCSTLAFFSQPLLMMVEGLFHGTLPASAPQVLAIYIGYVGTDYLRARLQSWTERKNGESR
990872..991954                     PHAGE_Klebsi_phiKO2_NC_005857: putative DNA adenine methylase; HDEF_1005; phage(gi46402138)     2.00e-141           CandidatusHamiltonelladefensa5ATMTFSNQPILVNGDALPYVKTLPDDSIDLILTDPPYYRVKSCAWERQWKTTGQYLAWLNDYLVEFQRILKPNGSLYLFCSAELAADTEIMPRNHMRMLNHIIWAKPYGRGTGCSKEWLRSYFSSTERILFAEQYGAEGTAKNKDGYKCAELKSEVFASLIDYFITAKNQLNITGKEIEQYMGSYMHRHWFSYSQWQLPNKTQYERLQEFFSQKAAEKKSASSLSKNHHPLSFTHDELQRDYGELMKSHDELKRQYENLRRPFSVTKDVPYTDVWNFPPVLYYPGKHPCEKPAALLEHIINASSKPKHTVADFFMGSGSTVKAAIQSGRQAIGVELETDRFLQTKKEIENLIPQINYQGMIF
992025..992213                     PHAGE_Bacter_APSE_2_NC_011551: phage 21-like group II holin; HDEF_1006; phage(gi212499716)     4.72e-11            CandidatusHamiltonelladefensa5ATMNNIEKYTTGTAYGASATTFLCGALSLSEWALVTGIICSLLTVGLNWYYRHKEYRFRTRNPS
992210..992707                     PHAGE_Bacter_APSE_2_NC_011551: lysozyme; HDEF_1007; phage(gi212499717)               1.36e-69            CandidatusHamiltonelladefensa5ATMNNQLKKRLLVATAGGVLALAAVLVQWHEGKRYKPYRDGGGVLTVCHGHTGKDVTPEEIYSEEECSELMRRDLQIARSVVEHYVTFPLSDLQKAALTSFVYNIGSGAFERSTLLKKLNVGDLSGACDEMRRWKYDEGKVSKGLINRRAIERELCLKPDLLTSPTQ
complement(992826..993689)         hypothetical protein; HDEF_1008                                                      N/A                 CandidatusHamiltonelladefensa5ATMATEIRLEGALLNRAINDYDISKIQSATNKSDVESLWGKITDWFCGTRKEEAKKALFDVIHNDNPDRKIECFNQLRDMVSPAYKDKFTYKITEVNDNLFTVNLLITDILSIENLSTTGKSIDITSAVSHSLDGVMNRGDFNLEQLKKDATRFTYTLNSKLYKHGFLTELELEKITVNMPKAQKKSLDVIASQTGVIAIKNGIHELGYGMSFVGTPELQSISISTKKDDVVKVELNLIQNHLNERFDIYKQSLPDAKYPCLSMKANIDIDNKGNYYIREIKVSHPGID
993779..993952                     hypothetical protein; HDEF_1009                                                      N/A                 CandidatusHamiltonelladefensa5ATMILKIFQEDDATWIFIFALYVAPFAEADFASVSRQECSSKARGEKAKAIFELNFETA
993985..994455                     PHAGE_Salmon_SEN34_NC_028699: outer membrane lytic protein Rz; HDEF_1010; phage(gi966201480)     4.66e-30            CandidatusHamiltonelladefensa5ATMTWKIPLIIALLLTSMSGVTLYYRTLYYDAEKARKIAVSDREKQQVAFEQLSHQIQTISALDDRHTKELADVQAKNHHLRRKLNRGGRVLVKGHCPVSTPRPSSLGHAGTIELSSIAGRNVLDIRAGIISDQAKIKYLQDYIRKVVLSNQHAKPNS
994436..994780                     PHAGE_Entero_phiP27_NC_003356: hypothetical protein; HDEF_1011; phage(gi18249898)     2.30e-49            CandidatusHamiltonelladefensa5ATMPNQIPRPFRKQGCGGITTARSGYCETHRNEGWVQHQRGRTRQQQGYGRAWEILRAKILKRDNYLCQTCLRQGIATEAKAVDHIKAKAFGGKDDETNLQSICYACHRAKTAKEH
994617..994841                     hypothetical protein; HDEF_1012                                                      N/A                 CandidatusHamiltonelladefensa5ATMITTFAKRAYAKVSLPKLKPLTILRQRRLEVRMMRPICNRFVMLATELKQQKNIKLYNSLSYRRGGMYRLNSQP
complement(994782..995105)         PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; HDEF_1013; phage(gi100019)      8.57e-08            CandidatusHamiltonelladefensa5ATMRDRAHDTAMAEVFRNDPNYAIELLNSILEDGEQGELLIVLRQMAEALGGVRKVAKSAELNPNQLYRTLSESGNPEVRSLTAILRAMGLRLAIQPIHTTSTVTQRII
complement(995109..995435)         PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; HDEF_1014; phage(gi100020)      4.90e-24            CandidatusHamiltonelladefensa5ATMYQIRHYLDKSERDHFSEWRDQISDTKAKIAIDRRIMRIELGNFGDHKPVREGVWELRIDVGPGYRVYYAKVNITVVLLLCGGDKRKQNADIDRACAYWHDWQKRTGD
995635..996267                     PHAGE_Entero_mEp235_NC_019708: terminase small subunit; HDEF_1015; phage(gi428781811)     4.81e-41            CandidatusHamiltonelladefensa5ATMPGPPKAPSQLCLVRGNPSKRPLNRNGPNPEKWVPSTPKHFSKQEKYWFERIAEDLNASDILTHIDGMALELLVGVYVEWRQHRDVIKKEGHLYRTESKDGNVMIRPHPQVAMMAVGLFMCSVNSDVFHAGVIQILLPSLPPDCVVVMDNATFHKRLDTQKVIDDAGHIIEYLPPYSPDLNPVEHKWAEAKSKRRAVNCSIDALFSHYMT
complement(996298..996579)         PHAGE_Paenib_Tripp_NC_028930: transposase; HDEF_1016; phage(gi971756981)             3.35e-08            CandidatusHamiltonelladefensa5ATMSYIIADKGVDFFDVRKLIRDSGKSPVIPRRKGAVCTGIQPNDKEKYKTRSAIERFFFSIKEQKRLALRFDKLDITFFSFFAIACLKVFNLLC
complement(996720..997085)         PHAGE_Paenib_Tripp_NC_028930: transposase; HDEF_1017; phage(gi971756982)             7.83e-18            CandidatusHamiltonelladefensa5ATMKNRHYPLKECDFIKIIEPHIIKYDKRPGRPASISHYQFFSAVLYVLRTGIPWRDVPDLYGHWHTIYMRFKRWSENGLFWNLLYRLQQKKKIKMDCTWVDSTTVAIHRHGSGSLKKRDLNR
complement(997505..997930)         hypothetical protein; HDEF_1019                                                      N/A                 CandidatusHamiltonelladefensa5ATMRARGTEYQRNRKEVSYGYRYPDSLVKTNRAKTLCPRRRKIDKDERQYPDAYQRERAARFGLRQKSICQALKRWRLTYKKMRGHPKADEKTRHLFQDKIARYQKQVKPLVYSMKETLPTTCQPLRIFSTRSALFWVPRLAG
complement(998021..998881)         PHAGE_Escher_RCS47_NC_042128: hypothetical protein; HDEF_1020; phage(gi100022)       6.55e-132           CandidatusHamiltonelladefensa5ATMESFRLTLISIFAAFSLPALAHQATIDKVKESERQLNARVGYVELDLANGQILNTYRPEERFPMMSTFKVLLCGAVLSRVDAGLEQLDRRIKYRQSDLVKYSPMTKQHLADGMTVAELCSAAITVSDNTAANLLLSTIGGPKGLTSFLQKTGDQVTRLDRWETELNQALPGDERDTTTPKIMAQTLHNLLTGKILSVKSRQQLQTWMVMNKVGGPLLRSVLPANWFIADKTGAGNHGSRGIIAALGADGKPSRIVVIYLTETQATMDERNKQIAEIGASLIKNWYS
complement(999191..999292)         hypothetical protein; HDEF_1021                                                      N/A                 CandidatusHamiltonelladefensa5ATMMITFFVGLRSDEDWLGIENFAHVNKTYLTKTT
999550..999645                     hypothetical protein; HDEF_1022                                                      N/A                 CandidatusHamiltonelladefensa5ATMPNTVNESDIRTGEHDETQIFVHEVGFDGQR
999935..1000096                    hypothetical protein; HDEF_1023                                                      N/A                 CandidatusHamiltonelladefensa5ATMDHFPETHCWRWPKYKFERLKNLQTILAKNSCLLSVFLSAFAIYALAGTIARH
1000153..1000479                   PHAGE_Rhodov_RS1_NC_020866: hypothetical protein; HDEF_1024; phage(gi472342875)      5.41e-21            CandidatusHamiltonelladefensa5ATMKNTTTPTLQGYDIREYLGIVTGEAILGANIFKDLFAGIRDFVGGRSNAYEKELIKARKIAFNEMNSTAESLGANAVVGINIDYEVVGTSNSMLMVSIYGTAVKIFSL
complement(1001248..1001385)       hypothetical protein; HDEF_1026                                                      N/A                 CandidatusHamiltonelladefensa5ATMANNLHGDIQKTAESVLTPSVGDQSQSKVRHRGNHGCPRIGQQDW
complement(1001784..1002986)       PHAGE_Edward_MSW_3_NC_020082: hypothetical protein; HDEF_1027; phage(gi448261087)     2.78e-18            CandidatusHamiltonelladefensa5ATMKSSLENQNSSNRFKKIERLLKSYLKSCKEMSLKFIILQKTLPYDASLDEIENLKKQKDSALKQLLKHEWHWEVPLNLRKANLENMNLQGINLSYTDLSGVKLCGANLTNSNLMCAKLCDADLSGSDLKGLDLIGANLINVDLTNTDLRYSNMTRAKLHGAKMHQTNLSEVDLTDVDLRSIKMGWINLSEAKLKECLLPLFIEADLGKVNVNEIRLGYSNPPEAQNSRGILVLGIPPKWNVDLLNQYLSNMNNERGSLLKTIDSIDCNKTKARLAGELIESLKNNDVSTVALPLLSMLNKPPYIEHDEIADYQNVLSGLLDTIWGLEHGFDKERQSLANEIAQLANEISDLENEITDWLNKVAKKSKATLEIYQLAHLLSSKKFSVLANLLLSNRIHLFW

#### region 3 ####
complement(1058521..1059198)       PHAGE_Sodali_phiSG1_NC_007902: hypothetical protein; HDEF_1132; phage(gi89886024)     3.88e-13            CandidatusHamiltonelladefensa5ATMHSNPKKICPQIIYYLNPHPHPQHIRDKASRYLYMNHAMAELLNVPTGVPVEGQGLSEIKPDISELFEGIKKQEERVIQKETAVSLLITGHFGKKTVFNPTLLIFILSVIKKVNLSGAQARQCQFFSALDYIQGKSPKTLTPSLSNTILTQRELQISFYYYQGVSQKEVAKCLHLSHRTIDNKLRGIDEKIGVHHQDKFKKYIEEIGLNQFIPHHLLASSIQLID
complement(1059443..1059640)       hypothetical protein; HDEF_1133                                                      N/A                 CandidatusHamiltonelladefensa5ATMRTFDFTSVSDLHDVFPALTSAQFETALLFSLGLTKKEIASTRGVSYPVVRDTFKRLKRSFKCSP
complement(1060544..1060918)       PHAGE_Sodali_phiSG1_NC_007902: transposase; HDEF_1136; phage(gi89886005)             2.90e-24            CandidatusHamiltonelladefensa5ATMSELLNEIGAILSYNEYTEKQVITMMNYLIQEGNATNPMEFITEIAKKSEKYEGTLMTMAQALRQEGRQEGIQEGIQKGKAESARTIARQLLANGVDRAIVKMSTGLSDAEMNALMGRVNSAKN
complement(1061025..1061309)       PHAGE_Entero_VT2_Sakai_NC_000902: similar to C2 of bacteriophage L; HDEF_1137; phage(gi9633420)     6.56e-06            CandidatusHamiltonelladefensa5ATMSFFDELKASLEEAIEIKNETKEPARVTCYALADVKAIRENLNVTQSEMAKVLGTSLATIKSWETGRRNPTGLAAKVLATIQANPKFFDELAAH
complement(1061311..1061643)       hypothetical protein; HDEF_1138                                                      N/A                 CandidatusHamiltonelladefensa5ATMSHAIEFIETTMFTRQIKQIATDDELKELQKELIESPDKGDLIQKTGGLRKIRMATGNQGKSGSVRVIYFLATSEVIYLVMAYPKSTKDSLTDAEKAELRKLTQRLKDEV
complement(1061977..1062261)       PHAGE_Salmon_Fels_2_NC_010463: DNA-invertase; HDEF_1139; phage(gi169936026)          3.05e-12            CandidatusHamiltonelladefensa5ATMTTSEKLSKRFPKMMQIVGSFAEFERTMLRERTRNGLAAARQDGRVGGRRPKLTPPQQKKLSLSSHRGRKKALIQTACSVFNLRPWYGFSPDTG
1062468..1062842                   hypothetical protein; HDEF_1140                                                      N/A                 CandidatusHamiltonelladefensa5ATMYLIINWEEFLQHHWQKQPVFLKKAISDFINPVSPEELEKLVIEKALESQLIQRRHGKCQLVHQSFNGYASLGQRNWSLRVEAIHHWHRAAEEFLSLFRVFPDWVKEALTVFFSVPGGGISPQD
complement(1062781..1063593)       PHAGE_Rhodob_RcCronus_NC_042049: membrane-associated initiation of head vertex; HDEF_1141; phage(gi100034)     1.55e-41            CandidatusHamiltonelladefensa5ATMADHTINQRVSKLRTLRPRKHELEFFIADEVELSSFRDEMASMEPPFFALKGGDTKVRKYKNGNVTVIVKATADGLATVFDKDVWIYSISKLQEAINNHQEISRTICFTPYDFFVTTNRTISGRTYQELERALDRLKGTTIKTNVFYSEEKQESIGFGLIDSWRILDEKKGNLDIGMIEITLPDSLYQALHKKKMLKISPDYFRIRKAIDRRLYEIARKHCGHQGEFTIALEKLHLKTGSTALYHQHVRRFSLEGKSHHRGLKKTLSALL
complement(1063774..1064373)       PROPHAGE_Xantho_33913: Tn5041 transposase; HDEF_1142; phage(gi21231545)              4.73e-15            CandidatusHamiltonelladefensa5ATMLNDIARGQSDPRKIVLQWDEMMRAAGSLKLGKLQASVLVRSLLKSERPSGLTQAIIEVGRINKTLYLLNYIDDEDYRRRILTQLNRGESRHAVARAICHGQKGEIRKRYTDGQEDQLGALGLVTNAVVLWNTIYIQAALDHLRAHGETLNDEDIALLSPRFATDISNMRGHYSFTLAERVTRGHLRPLKATSEEEKIA
1064943..1065038                   putative transposase; HDEF_1143                                                      N/A                 CandidatusHamiltonelladefensa5ATMLGHYSFTLAERVIRGHLRPLKATSEEEKIA
complement(1065063..1065458)       PHAGE_Clostr_phiCD38_2_NC_015568: recombinase/resolvase; HDEF_1144; phage(gi333798162)     1.44e-18            CandidatusHamiltonelladefensa5ATMSRVFAYCRVSTLEQTTENQRREIEVAGFNVRPQRLIKEHISGSVTASERPGFTRLLDRMENGDVLIVTKLDRLGRNAMDIRKTVEQLAASDIRVHCLALGGVDLTSLAGKMTMQVISAVAEFERDLLLGV

#### region 4 ####
complement(1322484..1323347)       PHAGE_Entero_SfV_NC_003444: capsid; HDEF_1439; phage(gi19548995)                     2.89e-136           CandidatusHamiltonelladefensa5ATMKLHELQQKRQTIATDMRALNEKIGDNAWTDEQRTEWNKAKTSLQSLDEQIAREEELRQLDQAIVDERADEQRKSLDKSNPEHEGERRTAAFEKFLRCGLGEMSSEERQALRELRAQGTTPDDKGGYTVPKVMLNKIVDSMKAYGGIASVAQILMTSDGQPITWSTSDGTAEEGELLAENTAVSEGDVTFGTASLGAKKLSSKMIKVSNELLQDSGVDIEGYLAARIAQRLGRGEAKYLVQGSGAGTPLEPKGLEASVTGTTNTAAVDKFTWQEILALKHSIDPAYS
complement(1323358..1323957)       PHAGE_Entero_SfV_NC_003444: capsid protease; HDEF_1440; phage(gi19548994)            5.52e-106           CandidatusHamiltonelladefensa5ATMLDRETRCYRGEIRAEQQDAQPSRIIGYGSVFNSRSEPLWGFREIIKPNAFDGVLNDDVRALFNHDANFILGRTVAGTLALSVDERGLQYDICTPNTQTIRDLVLEPMRRGDIDQSSFGFRVAHDGEHWYEDDEGIVIREIHRFSRLFDVSPVTYPAYQDTESAVRSLKAWQEAKETGVLQHAINQRMARERLLTLLNV
complement(1323950..1325188)       PHAGE_Entero_SfV_NC_003444: portal protein; HDEF_1441; phage(gi19548993)             0.0                 CandidatusHamiltonelladefensa5ATMLLDAIFRHEPLENPKTGIIAEMAETDGLFRSRTYVNPETALKLAAVYSCITVLASNIAQMPLHVMRKTDKGVDIARDHPAFYLVHDEPNTWQTSYKWRELTQRHILGWGNGFTRVIRSRRGEVLSLEACMPWETTLMNTGGRHTYGVYNEQGHFAISMDDMIHIQALGNNQKMGLSPILQHADTIGIGMSGQHYTASFFAVNGRPSGIVSVKGEIKDDGWLRLKALWTNAMLALRREENKTLLLPADLDYKALTVSPVDAQIIDMMKLNRSMIAGIFNLPSHMINDLEKATYSNITAQAIHFVRYSIMPWVANWEQELNRRLFTRAERRAGFYVRFNLAGLMRGTPQERAQFYHYAIIDGWMSRNEARAFEDMNPVDGLDEMLVSVNAANPIPLTTDEETKEKIKEEIADA
complement(1325178..1325339)       hypothetical protein; HDEF_1442                                                      N/A                 CandidatusHamiltonelladefensa5ATMKHLIIDIFGLAGFGLLSAGVYLQFGLPCSLMFSGTLMLAWALLAAMRRRHAT
1325398..1325775                   ISHde1, transposase orfA; HDEF_1443                                                  N/A                 CandidatusHamiltonelladefensa5ATMSYSVDFRQKVLSIREKEGLSIRATAKRFHVGTDTLRRWLKRIEPKPSGPRRGKMDKEAFIKDVAEYPDSYQRERAARFGVCPKAIWQALKRWGLTYKKNSASSQGKRRGTTGVPGKNRGVSKAG
1325816..1326220                   ISHde1, transposase orfB; HDEF_1444                                                  N/A                 CandidatusHamiltonelladefensa5ATMPRLYGYATRGQRCFGTHDWQAKGRTNVIGALLGVTLIAVGLFNCSINSDVFYAWVTQLLLPALPHPCVMMMDNASFHKRKDIQHAILNAGHSIEYLPPYSPEFNPIEHTWAQAKRKRRELQCDINTLFSEHIM
complement(1326240..1327997)       PHAGE_Entero_mEp235_NC_019708: terminase large subunit; HDEF_1445; phage(gi428781812)     0.0                 CandidatusHamiltonelladefensa5ATMATVAEGIRYAERVVSGEILACQYVRLACLRFLDDLKNGEARGIYFSRPRAQHVLNFYKVIPHVKGNLVGQPIELMDWHIFILINIFGFVIPLIDEKTGERVLKSDGSGKPVMVRRFRTAYNEVARKNAKSTLSSGIALYMTGADGEGGAEVYSAATTRDQARIVFDDAKIMIKKAPLTLGRFFEFNKLAIYQEHSASRFQPLSSDAHSLDGLNIHCGIVDELHAHKTRDVWDVLETATGARLQSLLFGITTAGFNKAGICYELRDYAIKVLRGFDSNVAGAIKDDTFFSIIYTLDENDDPFDENVWLKANPGLGTCKYWDDLRRLAKKAQEQVTARVNFFTKHMNRWVTAESAWMDMIKWEKCKYIAPQHELNTYPLWVGVDLSNKIDICAAVKVWRTNEGHIHVDGKFWLPEGRLARCSRQMAEMYRKWAALDRLTLTEGDVIDHAQIKEALQAWVSGESLKEIAFDPWSATQFSLSLAEEGLPLVEVPQTVKNLSEAMKEVEALVYSGRLHHTQNPLMNWMMSNITVKIDKNDNIFPNKSTPEAKIDGPVALFTAMSRVLVNGGNKTDFLSTLDPIEDLLML
complement(1327997..1328473)       PHAGE_Entero_mEp235_NC_019708: terminase small subunit; HDEF_1446; phage(gi428781811)     1.19e-67            CandidatusHamiltonelladefensa5ATMSGPPKTPTHLRLVRGNPSKRPINKSEPQPTKGIPPTPKHFNKQEKYWFKVLGERLDSIGVLTVLDAMALELLVGAYIEWRRHRDVIEQEGESYKTTSADGSVMIRPHPQVAMMADAWKRICRMQAEFGMTPASRSKVNVNEAETLDPFAALLSKRED
1328688..1328945                   addiction module antitoxin; HDEF_1447                                                N/A                 CandidatusHamiltonelladefensa5ATMANHLVQTRIDAEIKEEAAAVLGAIGLTVSDAVRLMLTRTAREKALPFEPLVPNETTIAAMREARAGKLEAVTLESIQAELNADD
1328932..1329213                   addiction module toxin; HDEF_1448                                                    N/A                 CandidatusHamiltonelladefensa5ATMRTIKQTSQFKRDLKREKTGRYRATLNMELMTVLSNLAQDEQLASRYFDHALKGKLEGFRDCHIKPDLVLIYEKPDDYTLSLIRLGSHSELGI
1329256..1329705                   PHAGE_Shigel_SfIV_NC_022749: hypothetical protein; HDEF_1449; phage(gi557307562)     4.02e-08            CandidatusHamiltonelladefensa5ATMSDYSRLFEAIKKTIYADYGSVYHNDSNRTTTDQDDKAQVHSYLYLILEIVIHEHRKKYATIYEPLSGIKALKHKLFTKNKIAIDRLDALALEEIVFSLLEDLNQENLSVEAQNFLNKIKLPQYFESIDWNRKINWTLGSGKDYLKNSD
complement(1329503..1329916)       hypothetical protein; HDEF_1450                                                      N/A                 CandidatusHamiltonelladefensa5ATMMEKNKENVEQKLLPYGNKPFIYAGNLNLYNLVAWLENEAKKLRDRASSLHKIENDTEELVKKLSIFKEPSNLNFSDSLYLNQESNLFYDSNRCSQNIEAALSYLKSSGLLPKDFLGLGLQEEKKQSLRERAHPDDL
complement(1329917..1330285)       PHAGE_Entero_SfV_NC_003444: hypothetical protein; HDEF_1451; phage(gi19549040)       2.66e-44            CandidatusHamiltonelladefensa5ATMPSRIPRPCRKHGCGGTTIASSGYCETHRHEGWVQHQRGRTRQQQGYGRAWEILRAKILKRDKYLCQTCLRQGLATEAKAVDHIKAKAFGGTDDETNLQAICHACHKVKTAQERFNYQPKKG
complement(1330266..1330595)       hypothetical protein; HDEF_1452                                                      N/A                 CandidatusHamiltonelladefensa5ATMARFRSIDSYAIQVSFKENDTQEEYISICEPVINNDFLNFTTVDRIECFIPTSRINYVKTFPIEKYSENDKVQSRKSHAFKINPESLNDLQNELKTFFNQNNQNAKPNS
complement(1330612..1330920)       PHAGE_Mannhe_vB_MhS_587AP2_NC_028743: hypothetical protein; HDEF_1453; phage(gi970580048)     1.04e-07            CandidatusHamiltonelladefensa5ATMSMDWICIKDRMPELNSKVLIYKKDKNIQLVGTYLGNCNFHYGDCCQGIQKTCSASHWMLLPESPSEDDDIEVVKNAKDPFMKALSRIQKRHARTIKMLGKL
complement(1330917..1331246)       hypothetical protein; HDEF_1454                                                      N/A                 CandidatusHamiltonelladefensa5ATMKENNKPDYEALGRCVFLNNEIHARIASLREPVSHLHELGFTPHYLDSNKPKLSINQKVIDAVEELARETRDIYSEIYHLAREYNKWAALARQESITIKVYSDSSEQDK
complement(1331233..1331730)       PHAGE_Sodali_phiSG1_NC_007902: putative phage endopeptidase; HDEF_1455; phage(gi89885988)     8.65e-30            CandidatusHamiltonelladefensa5ATMRWQFPIVAGLIVSVLGVTLYYRTLYYDAEKARKIAVSDREKQQVAFEQLSHQMQTISALDTQHTKALEHDKKLITQLERDVATSRRRLQVNATCPAMPTGSPASSLDDATRSRPTDAAQRNYFTLRRRIEIAEEQINGLQDYVQHVCLAAISKDLKRNKLNERK
complement(1331730..1332440)       PHAGE_Salmon_118970_sal4_NC_030919: sliding clamp DNA polymerase; HDEF_1456; phage(gi100042)     3.94e-75            CandidatusHamiltonelladefensa5ATMKHLTIILNSVNVRVDSEGRYNLNDLHKSAVAGGRAKESQRPGEFLKSRQITRFVQELASATIVAPVRTINGGKNPGSWGIELVAIRYAAWIEPKFEIQVYNSFVEAKRKKALAEINRNTSRLEYKPMTDAIKHEREAQGKTIAPHHFSNEADLINRIALDMTAAKFRVYHDIGKKESIRDYLTPEQIHCITELQRANTVFIAMGWDFEQRKSTLMGIFDKNHRQPLIEEQHRLAA
complement(1332792..1332998)       PHAGE_Escher_vB_EcoM_ep3_NC_025430: hypothetical protein; HDEF_1457; phage(gi712913186)     1.03e-06            CandidatusHamiltonelladefensa5ATMNNIEFIENHVVTELVKQGYEQSVARISADIAVEHYRRNAASAKGKIFSDCLHAAKVWAGRYQPQIKR
complement(1333020..1333547)       PHAGE_Escher_P13374_NC_018846: antirepressor; HDEF_1458; phage(gi410491647)          3.80e-95            CandidatusHamiltonelladefensa5ATMQTITVPFHGNALYIVNHNGEPYAPMKPIVEGMEMDWASQFTKLKQRFNTTIAEITMVAEDGRTRKMLCLPLRKLAGWLQTINPNKVKHEIRDKVVQYQEECDDVLYEYWTKGQVVNPRKRSIMQELNTACAELKTDKAIASLFGTGLSEWKNIKAAHTKKVKGLIEEAQLLLTF
complement(1333722..1334219)       PHAGE_Bacter_APSE_2_NC_011551: lysozyme; HDEF_1459; phage(gi212499717)               8.62e-68            CandidatusHamiltonelladefensa5ATMNNQLKKRLVVATAGGVLALAAVLVQWHEGKRDKPYRDGGGVLTVCHGHTGKDVTPGEIYSEEECTALMTQDFQVARSAVERYVTVQLTDLQKAALTSFVYNIGSGAFANSTLLKKLNAGDIQGACDQMRRWKYDEGKVSNGLINRREVERELCLNPNALINPTQ
complement(1334212..1334403)       PHAGE_Bacter_APSE_2_NC_011551: phage 21-like group II holin; HDEF_1460; phage(gi212499716)     1.85e-11            CandidatusHamiltonelladefensa5ATMNNIEKYTTGTAYGASATTFLCGALSLSEWALVTGIICSVLTVGLNWYYRHKEYRYRTRNLNE

#### region 5 ####
complement(1426317..1426487)       PHAGE_Endosy_APSE_1_NC_000935: P37; HDEF_1565; phage(gi9633584)                      1.59e-08            CandidatusHamiltonelladefensa5ATMHIAIKAIAPLQDALDLGVSTEQEIDTLHAWKTYRVALHRLDPKARAMARPEVPRG
1426452..1426616                   hypothetical protein; HDEF_1564                                                      N/A                 CandidatusHamiltonelladefensa5ATMQGRDGFYGDVHESVFFPFQCDTVSMVLRWLKLYYIILLKTGFMLFAFLPFRQG
complement(1426682..1427092)       PROPHAGE_Xylell_Temecula1: phage-related tail protein; HDEF_1566; phage(gi28198980)     3.79e-09            CandidatusHamiltonelladefensa5ATMTRLGGKVGAVAKSASGFLLYVKKGEAKTASGAFIRPIFLTPKEVTNWRVSLVERGAYASVKAKYRDNAQSKEMEVTTGDENRLTSFAGSSKMKRKRARRRERNWRILSEASLPSAYTTGQSPIHGRSAFAPVRLS
complement(1427109..1427219)       hypothetical protein; HDEF_1567                                                      N/A                 CandidatusHamiltonelladefensa5ATMTLKEILDSIAREPHLTPKLSDEFGTIDYEVVQSDE
complement(1427528..1428004)       putative glycosy hydrolase family protein; HDEF_1568                                 N/A                 CandidatusHamiltonelladefensa5ATMNMAVMKKKELKPYQYLLAQKDACPIVMTAHVVNRHLDPGGKPATLSKAIIQGKLRDEMGFQGIVSTDCMQMSAIADNYSLSEALKLSINAGADMLIFSNQQSPVWQNPADVIDLIYAHVKSGEIKSSRIESAYQRIIHLKKKLSDVDKNIANIIDTQ
1428064..1428276                   hypothetical protein; HDEF_1569                                                      N/A                 CandidatusHamiltonelladefensa5ATMTITGGSLHAAGDLIVSAGGKTNLVFSRVVISPPGSGHAIHFTGTGGEVDLMPEPDSPLREHCGGGCVLA
1428335..1428634                   PHAGE_Shigel_Sf6_NC_005344: gene 56 protein; HDEF_1570; phage(gi41057344)            1.66e-16            CandidatusHamiltonelladefensa5ATMSQPTFKPELKREVAHLVIEQNYPFRQGSEAMGVSISALRDGVKRAMSEKRGQTISQGKTMTADQQRIQELEARLRKVEREKDILKKASALLMSDFYNR
1428644..1428763                   hypothetical protein; HDEF_1571                                                      N/A                 CandidatusHamiltonelladefensa5ATMTEVRITLKQNDVMSLASIEVLTIINVIGRKKAPLNVNA
1429030..1429653                   PHAGE_Edward_MSW_3_NC_020082: hypothetical protein; HDEF_1572; phage(gi448261087)     3.43e-16            CandidatusHamiltonelladefensa5ATMELIAKHNEEHPADFKKYDSIEYKHVFNELREQGKTVLDGLRLPVGADVTNTNLNELQLILLNAQGADFRGSTIRNTDMFGADMSETNLNDLDLSTTKLFHACFSGASLENVNFSENKSLKFTRFSEANLQKANFNNTKLHCANFKKGNLEGATLKGADLTGANLKGTDFTNADLRNVDMTEDELLASGAILTGAKVGNNSTWKELL
1429149..1429161                   attL                                                                                 N/A                 ACTGCGTCTACCA
complement(1429674..1430006)       hypothetical protein; HDEF_1573                                                      N/A                 CandidatusHamiltonelladefensa5ATMTDVLGPALTYKLGQSMGGARVYVPKKIQADYPLGLLLGGQDAERLCAHYAGNVLDLPSKYFFRAVRNHHIRQEYHSGTLTGSRADHLALKYGLSRRQVLNVVRQQCHFD
complement(1430041..1430268)       PHAGE_Entero_mEpX1_NC_019709: putative replication protein DnaC; HDEF_1574; phage(gi428781919)     5.07e-08            CandidatusHamiltonelladefensa5ATMNAQAARQCLRVCQTYAEHWPARKAQGCGLVLSNLAPTELADCIGESVMDRMQECGGGTLAFTWGSYRQRKGQCV
1430629..1431237                   PHAGE_Escher_PA28_NC_041935: hypothetical protein; HDEF_1575; phage(gi100028)        1.43e-19            CandidatusHamiltonelladefensa5ATMNEKTLAERLRMAMKKTGLTQAKLADAAGMTQPSIWKLLNGKALSSTKLIEIAKVLRVRPEWLSEGKGLIRENEKENLEKNISYDDIFSVAVYGKNGPTGEKVLVPDLVKSKYCRAYRLDINSGCADAPAGTLIVVDTEEIPGTGDLVYACINDTMSVYRFMQGGMFGFLSVDDLRIPLFELTSKSSLIGVLVYLSRSLRRR
1431667..1431780                   hypothetical protein; HDEF_1576                                                      N/A                 CandidatusHamiltonelladefensa5ATMNAKKRCKLRRTVRCREERQRLETQWREERKKGGGLF
complement(1431886..1432347)       PHAGE_Endosy_APSE_1_NC_000935: hypothetical protein; HDEF_1577; phage(gi9633594)     3.18e-52            CandidatusHamiltonelladefensa5ATMGQVAFDTLQATEDLETVGMSREHARAISLIVRRSHEVADVATKADIADVKRDIADVRKDLSAEIADVRKDLSAEIADVRKDMKIQSEKVDAQFADVRKDIDTRFEKVDAQFADIRKDMNNKLEKLGLSLTIKMGGMIGFLVVSIGLMLKYLR
complement(1432417..1432569)       hypothetical protein; HDEF_1578                                                      N/A                 CandidatusHamiltonelladefensa5ATMIKGLQQANKPLNQRMTRRFFWLTPSMWVFFHQKLLKYKASQARLMKGGK
1432581..1432679                   hypothetical protein; HDEF_1579                                                      N/A                 CandidatusHamiltonelladefensa5ATMTLNIVGAFLWMTLAGQPDCFPNTESGYQEMA
1432676..1433047                   PHAGE_Endosy_APSE_1_NC_000935: P43; HDEF_1580; phage(gi9633590)                      4.33e-23            CandidatusHamiltonelladefensa5ATMTLNPFIYNPQHAKSSAELANALQYARADFVTRIYDPKKDEFTPCMTETVNLTFNGIHNSLCEKTVRIFSLCGAHLIAMFANTPVAKEFRKWCLDILDKEVGVPEHQPQSPEVFNGNDLNNLA
1433089..1433199                   hypothetical protein; HDEF_1581                                                      N/A                 CandidatusHamiltonelladefensa5ATMASRHLVCSAMNALLEAAAHQTDNTLASTLFMHKKP
1433199..1433462                   PHAGE_Entero_HK022_NC_002166: integrase; HDEF_1582; phage(gi9634144)                 2.05e-20            CandidatusHamiltonelladefensa5ATMEKIQGPNRKNGRDLSPHLHVRHQGYYCYRDPRTGKEYGLGKEKRMAINEAISANRQICDAPVSLNDRINEVKALSMTEWMEQFTKK
complement(1434449..1434766)       PHAGE_Haemop_Aaphi23_NC_004827: putative antirepressor protein AntB; HDEF_1584; phage(gi31544013)     2.92e-16            CandidatusHamiltonelladefensa5ATMSQTHPLIAIKAHLINGKTVQTVNARDLYHFLEVRLSFSTWMKNHINRYEWVDNTDYLVFTHSGPHAGRPFKDYVLTLEKAKEMTMLTCTEKVRALENRLNEILS
complement(1434884..1435654)       PHAGE_Endosy_APSE_1_NC_000935: P43; HDEF_1585; phage(gi9633590)                      1.73e-44            CandidatusHamiltonelladefensa5ATMTNQLLTPFCFESFVIRVVIINNETWFIAQDICCALQIQNVTQAVERLDDDERSMFNIGRQGQVNIISESGLYTLVLRCRDAVKKGTLPHRFRKWVTHEVLPQIRKTGQYLPEKYQPESPEVFNGNDLNNLARLVWEMSDGFRFENSWSHGIWFALRQVTGIPSPKPFQTRHIPLIAEECVRIFHLTNRFKDVVADTEKQVIRRVIRQREDADNVISEMHALLEAAAHQTEHTLSSTLEKWQQRELRQFLHRGQTT
complement(1435758..1435850)       hypothetical protein; HDEF_1586                                                      N/A                 CandidatusHamiltonelladefensa5ATMTATLLTRRERVFLCRHSCFISMVDWIGQP
complement(1435932..1436723)       PHAGE_Escher_PA2_NC_028449: antirepressor protein; HDEF_1587; phage(gi953358051)     5.77e-38            CandidatusHamiltonelladefensa5ATMSHILKTPLMLFQSAEANIQLQGMLYQGKPVFFAVELAKALGYKNPHEALQDNCKLLIKLNSSQTLELNLGFKPKGIILAPESDLYRLILKSKLPSAERVQDWVCEEVLPTLRQQGSYSMNKTHRDAGSGLPEFRKARAMQIQMEIAEKTFQWATGLSDIARQAVIAGLINPIAGHEVIPLPVIEEQHYSATQVGKIFHVSANKIGRIANDNHMKTDEYGEYYLDTSRHSSKQVESFRYNEKAVKKFKRILMAEKEVKNHVLV
complement(1436911..1437288)       hypothetical protein; HDEF_1588                                                      N/A                 CandidatusHamiltonelladefensa5ATMIHIDIQIIQAFSRAFVVKNFRNRFVHEAIKKPARLHQRICHGIEDVFPIAYKNCSFQFLPDEPCLILCGNLRLEKSTWSQVQSVGIGGFLVMSLSQLKFYAETEGRPKSEIWGASLNHGTVKKI
complement(1437531..1438046)       PHAGE_Mycoba_Adler_NC_023591: hypothetical protein; HDEF_1589; phage(gi589892236)     1.24e-08            CandidatusHamiltonelladefensa5ATMKNILILLITGLLSAFSWADDITGRVVSVHDGDTLILLTPEQKQIKIRLAEIDTPEIGQPYGNQAKKALADLVFDQTLTARSNQKDRYGRVLAQLYLGEVWINAEMVKQGDAWVYRQHSRDPRLLAFETQAREEKKGLWALPESQRVPPWEWRKSRWTQRKHPPFLSEPAP
complement(1438074..1438208)       hypothetical protein; HDEF_1590                                                      N/A                 CandidatusHamiltonelladefensa5ATMLNEEIEQAVHTFLNEIEKEIECIKKNASKMPSQVRPATDSLPM
complement(1438202..1438729)       PHAGE_Paraco_Shpa_NC_041868: RegA; HDEF_1591; phage(gi100039)                        3.13e-57            CandidatusHamiltonelladefensa5ATMQQRTPDWFEARCGKVTASRLGDLMAKTRVGVAASRARYQAELICERLTGQREEGFVTAAMRRGTELEPEARDLYRLYFGNEVKEVGLIPHPAIPDFAASPDGLVHQEGLLEIKCPNAWTHLELLKTGQIKTPWRLQMQAQMMCTARAWCDFVSYDSRFPQSSPTFKSEFMLNLC
1439490..1442108                   PHAGE_Mycoba_Panchino_NC_031281: hypothetical protein; HDEF_1592; phage(gi100028)     5.30e-32            CandidatusHamiltonelladefensa5ATMKLLTELGYEDQNIRPKRSLAELSVKKLNSRRAVKYRPDYGVVLKNKIRLIVEAKSPSESLEDHILQPRDYCATINGEHEKNKPVKYFLLSNGNLTQLYKHDLNMPILALSFSDFENDNNKFKKLKELLNVNELSKETEDSNEENSLQLKKAPLKDVNEAFAWCHQFIYKNDNISQGAAFMEFVKIVALKLLSDREIRDKYPNKVEEEQFNVPLADVRFSRKLLAEQEKHTANPLSSIWFSDFISKMEIEISTKKKKRIFEKDDQINLTPETINGVVSKLEHLFLFGIDADLNGRLFETFLSATMRGKDLGQYFTPRSVVKLGVALAGLKIDAQDISRSDRVYDGCCGTGGFLIDVFADMWSKIEKNPSLSKEKKEEYKQAIAYGHIFGADIGRDPNLSRIARLNMYLHGDGGSCIYNIDALDKELPVHKTDKPELLAEKEQMRNIYANKEGFFDVIITNPPFAKKYSIGKSKDKEKNEISNAERILSQYSLKTYDAGKVKTELRSNLMFMERYYDVLKKGGRLLTVIDDGILNGKDYSWFRDWLREKFIINAVVSLPGDAFQRSMDRVKTSILILTKKHTENESQPSIFMYPCVFVGIDDPARARTLPIDAHNKKKAKEEIEDISHEYQKFTSGNGNEKYIVDADRISDRLDVKHCLMTVGSNKENWLSKGFKVTKIEDALELKVFTEDEVIECAEHSATEVPLIVRYDGSSEAGNAIFPADTQYNRLYRVSEGDVVISNIAASYGSIAVVPEDLGGCVVSSEYTILRAKPGFEPKMLWAILRSPVVLSEILLVATGANRTRVKWDAMKSLSIPYPKETTEKEFVESLLKLEALEKETVSSKKQIIDLAVNNLELVTNDAEIILSAFKPPK
1443634..1443646                   attR                                                                                 N/A                 ACTGCGTCTACCA

#### region 6 ####
1498612..1498623                   attL                                                                                 N/A                 TATAAAAAATTA
complement(1498879..1500024)       PHAGE_Bacter_APSE_2_NC_011551: integrase; integrase;; phage HDEF_1648(gi212499734)     0.0                 CandidatusHamiltonelladefensa5ATMSIFKRGKIWYGSYTTPCGKRIKESLGTEDKKQAQELHDKRKAELWRIAKLDDFPNVTFDEACLRWIEEKANKKSLDDDKGRLGFWLLYFSGTRLKDMTEAKIYSAISKMKNRQQQLRWKSRVNSAKRKGIEIPAYQAKEVSIATKAKHLALLKSMMRSAERDWKWIEKSPVIKVPSAREKRIRWLEPDEAERLINECPEPLRSTVEFALATGLRRSNIINLAWSQIDMQRKVAWIEPENSKSGKAIGVALNDTACCILTRQLGNHQKWVFVHTMSAKRSDGSQTNSIRKMRVDSNTAWRAALKRAGIENFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLSPSHLTEHAKKIDEALANDVTNLALLNNS
complement(1499880..1500260)       PHAGE_Bacter_APSE_2_NC_011551: excisionase; HDEF_1649; phage(gi212499735)            4.43e-89            CandidatusHamiltonelladefensa5ATMRNVMNKATLTRQEAAKIIGISEDTLTNWCKLGIISYQRKNPYKKKSPYLFTKEACIEAVKNSINTLSESEIDVSRSNKCQSSNVVKFGTAVTQHRAEKELRNHLAQRTKNKLRSYTTNEKLNYGE
complement(1500475..1501857)       PHAGE_Bacter_APSE_2_NC_011551: DEAD box helicase; DEAD; phage box helicase; HDEF_1650(gi212499736)     0.0                 CandidatusHamiltonelladefensa5ATMKTFTPRPYQNLIINHLLDIKRSNVWAGMGMGKTAATLTALENLYLSGSETKPTLVLAPLRVAQSTWPDEALKWSHLRNIEVQPIIGNSKARIAALKNTHASVFTVNYDNLVWLVDILGDTWPFGTIIADESTRLKSFRLRKGGKRTAAIAKIAHKSVHRWVNLTGTPSPNGLMDLWGQAWFVDQGERLGRTHNAFTSRWFNRIQLPGQQWSRFEPLGFAHLQIPLALSDVTLSLNAADWFDIEEPIHNVINVTLPAKARAHYQAMEKELFLELGDSAIEALNAAAKTIKTLQIAAGAIYSDDNHNWTAIHDAKIQALESIVNESGGTPVLVAYHWKHDLERLLKAFPKGKMLDANPQTLTNWNSGKIPLLFAHPASCGHGLNLQDGGNILVFFSHWWDLEQYQQIIERIGPTRQAQAGHNRPVFIHHIVAKDTLDEVVMERRNSKRAIQDLLLEAMKRK
complement(1501877..1502623)       PHAGE_Bacter_APSE_2_NC_011551: DNA binding protein Roi; DNA; phage binding protein Roi; HDEF_1651(gi212499737)     0.0                 CandidatusHamiltonelladefensa5ATMQNLITFQSLTMSSIEIAELVNKRHDNVKRTIETLAKSEIIQLPQSEKVENKQSNSPNRFTEVFIFEGEQGKRDSIIVVAQLCPEFTACLVDRWKELEQKLNTPSLPTNYIEALEALVISEKEKAVITDQRNEAIRTKSHISRKREATALQRNSAYQRIANRATREREKMAARFGASKEWASQQAVWRATGKMFGWKVLNAWLNKHDIYDPLTSGYPTCFNPDQNRREVIYPREAWLEIHGIDIAELF
complement(1502689..1503462)       PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; hypothetical; phage / Antirepressor; HDEF_1652(gi212499738)     0.0                 CandidatusHamiltonelladefensa5ATMTTLIFRNTVLETIFHNREIWFTSAELARALEYTETDAVTKIFNRNKDEFSECMTTTVNLGVVRKTGTVRMPVRIFSLRGAHLIAMFARTHIAKEFRKWVLDILDKQAVNQTSSFTPQPQSKAVERFSHSDTRNLTHLVWCMTNGFRFERSWSNAVWLALREVTGTPSPERFQVEHIPLMTDECRRIYYITETLRQIINDAEKQAIKRILRKRENIDTVLAEIKQLFDHFHHQQIGIITEHTDHWYEGELTHFLERH
complement(1503767..1504570)       PHAGE_Bacter_APSE_2_NC_011551: conserved hypothetical protein G; hypothetical; phage protein; HDEF_1653(gi212499739)     0.0                 CandidatusHamiltonelladefensa5ATMSKLVVIENTIVRQDAFGLYCLNDLHRAAVAQGKATESQRPSVFLRSEGISAFVQKVSEASQSASVNIIKGGLESGSWAVEIIAIRYAAWIDPYFEVQVYERFRDSVKSNNGVLVEKVQAGLAMIAFYKQELRIAPSAMLGAMKKLQSSLGIPDILPDYAVDTPEGSLTGSSEVTHSFTELLQLHGKPYSPPSGFKRLQLLGIVERKSRPSNKHPDKEKLFWSLTEKGLQFGKNLTDPNHPRQTQPHFYDGQFPRLLGVMMNGIAAA
complement(1504982..1505266)       PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; hypothetical; phage protein; HDEF_1654(gi212499740)     8.91e-63            CandidatusHamiltonelladefensa5ATMRLIREDSIEKHLVREVQKIGGIAYKFVSPGRRGVPDRLVALPNGKIIFVECKAPGEKPTPYQLREHARLFALGHQVIVLDSQDLSSILPPYEL
complement(1505501..1508482)       PHAGE_Bacter_APSE_2_NC_011551: DNA polymerase; DNA; phage polymerase; HDEF_1655(gi212499741)     0.0                 CandidatusHamiltonelladefensa5ATMQNLLFCDLETYSDIPINCGTHRYAENAEILLFAYAYNHAPVKVWDVTQDKTMPADLKAYFDDSEILTVWHNGGMFDTVILKRVLNIDLPLSRVHDTLVQALAHGLPGALGLLCDIFNVNSDKAKDKEGKALISLLCKPRPKNSKIQRATALTHAEEWQRFKDYAGSDILAMREIYQHLPNWNMNVDETELWQLDQKINRRGMCMDVELAKSALTAVENEQKRLSTVTQQLTDNAVQNATQRDALLQHIASAFGITLPDMQASTLQRRINDPDIPPDLRELLSVRLQSCTTSTSKYKALLKSVSADGRLRGTKQFCGASRTGRWAGRVFQPDNLPRPTLDPNTIDNGIEALKAGCAELICDDIMQLTSSALRGCIIAPPGKKLVISDLSNIEGRMLAWLAGENWKVKAFSEFDNGKGDDLYKLAYARAFNLLPEDVTKDQRQIGKVMELGLGYGGGVAAFLTFALAYGLDLDELAEAALPHIPPGVKREATSWYQKSVETDKTYGLSEKIFVNCDSLKRMWRNAHPQTVSFWYDIEDAVKQAIQSPGIAFKCRKLSVRRDKGWLRICLPSGRSLCYPSARIENGQITYMGTNPYSRKWERLKTYGGKSCLAKGTLVLTITGWMPIEIVSQDAYVWDGIEWVRTDGSVFNGNQEVIQAYGVGMTADHQVLTEKGWKSASQSKRYNRSSCRLPDGYELPRFRRKEINLESTLHLWTRNNHSSNRITKTKKTRYSCLLRMPKGTNNIMQKPKARNVKTPRFCCMEQHVSQMYSPFPQSMVKLWWSGNNGLQTLAKKFQQFLGRHGQDIPTRLIFRSHQQQCRLPPQKLPLGYVASTSSKYSTSTIRANSPRHNEYTGISSPNRDCSKHALLSPGKKGKSSTTSGAPKHIAEVYDLINCGPRNRFVIATPDGPLIVHNCENICQAAARDVLAYNMPPIEKAGYEIVLTVHDEIISEAPDTPQFSAEGLSKLLSFNSDWAWDLPLSANGFETYRYRKE
complement(1508495..1508842)       PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein I; hypothetical; phage protein; HDEF_1656(gi212499742)     1.10e-78            CandidatusHamiltonelladefensa5ATMRNFHMQNLMNAQNITLSGGETIDSQQLLVMVNETRKDTGLRRNGLSDAKCRQLVMAWNIPYKKVPHVVPGGPITQMSVVDEEAFKNALDKMMLRAEKRGSQWYHPKMGRFSVTA
1508918..1509283                   PHAGE_Endosy_APSE_1_NC_000935: hypothetical protein; hypothetical;; phage HDEF_1657(gi9633594)     9.03e-57            CandidatusHamiltonelladefensa5ATMGQVAFDALQASEELESAGISREKARAISLVVRKSHEVADVATKRDLEDVRKDLTTQISDVRKDLSAEITNVRKDMEITRKDLQLEMSGIRAEQKLIRWMLGAGILGILSLVVKAFLMPAL
1509291..1509365                   tRNA                                                                                 N/A                 GGGCTGTTAGCTTAACGATAGAGCTGAGGGCTTTTAGCCCATCGCTTGCGGGTTTGAGTCCTGCACAGCCCGCCA
1509471..1509482                   attL                                                                                 N/A                 GCATAACCCTGT
complement(1509643..1510197)       PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; hypothetical;; phage HDEF_1660(gi212499744)     1.92e-134           CandidatusHamiltonelladefensa5ATMKIKLNNVRLAFPELFEPTQVSGQGAFKYRANFLIPKSRTDLIEEIKAGIKHVIGEKWGNKDIEKIYNSICNNPNRFCLRDGDSKEYDGYAGNLYLSASNKSRPLVIDRNTSPLTAQDGRPYSGCYVNATIEFYGYDNNGKGVSASLRGVQFFRDGDAFTGGGVASVEEFDDLSMAEEEELLAS
complement(1510213..1511532)       PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; hypothetical;; phage HDEF_1661(gi212499745)     0.0                 CandidatusHamiltonelladefensa5ATMINQRVAMAEHAKLAPSSAHRWLKCPGSAALEATLPDKTSPFAEEGSAAHALAESILKRRQNLYSEGCRQTYGFDAKEYIGTYPLLKANSPQVDEEMIEHVQTYIDTVWQLANGKMLQVEERVDFSAVIGVDNSFGTADAIIVSSDELQIHDLKYGKGVKVDAQKNEQLMLYALGALQQFDLVYDFKTVRLFIHQPRLNHLSEWALSVDELKDFGEQAKSGAQKAMKMATLAELSGLDALPDSAFSPGAKQCLFCKAKGGLCFAQAQFVHNEVKGDFVDLTQPLASQLSDAPKRITLLTPEQMAKLYPHVDLIESFCKALRNRVAEALHTGQSVPGFKLVTGKQGNRTWGDEREAETLLKGAKLKQEQIYHKKIISPPQAEKLLKKDKPHRWAKLEALIERADGKPVIAPESDPRPAIITTPLNDFDDVTEAALVDKSI
complement(1511504..1512421)       PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; hypothetical;; phage HDEF_1662(gi212499746)     0.0                 CandidatusHamiltonelladefensa5ATMLTANTPLLARLAENHTQMLMAHNQLTEAHTMLISQLVVQFEHDPHEPREANKPKPFAQDVKPQPVAPSVIVEPKEAIEPVVEAHTKADDKPAPVVAEKKGKVAKAETKPAKAVKPMVEDPKVAPEPEPVDIESLDLRHVVSLSVLFGDKAVKPDHTQVAKAKATFAAEKADGVTGQIDALYCALNGISNIKTLSKTSTFDLCLKMLANWDNLFGITERREFALSLLHELPTPTEVKPIDFNALRSEASARITQLVKGGYRNEALDILASFNAKKLGDVTDDNLARFIEKSQSVLSDDKSEGSDG
complement(1512986..1513768)       PHAGE_Bacter_APSE_2_NC_011551: cI; cI;; phage HDEF_1663(gi212499706)                 3.84e-174           CandidatusHamiltonelladefensa5ATMRKIYLNLNIICVKVYFEFYIGLKGSNIMGMMTAKLNKNIKKLMAEKGVKSVAELSRRIGMPQPTLHRMLSGEVKSPRLKIIQKIADFFRVEANELLYKDLITSHISIENKTKAYERVEVKAIPFNFCKVPVLGTTQLGGGGYWNSKESSAGHDYGYIIWPTEDRDAFALRCQGESMMPRIQHGEFVVMEPNHKYKPGDEVLVQDDHGQVMVKTFLYQRDDVVHLLSINSNHPPIRLAASTIEKIIYVAGIAKDSLYYRE
1513780..1514064                   PHAGE_Bacter_APSE_2_NC_011551: putative Cro-like protein; HDEF_1664; phage(gi212499707)     5.28e-63            CandidatusHamiltonelladefensa5ATMRIGIFKHLKEMNNWRKTVYKKSPIEIVQALLAQGLTQSEIEANTGIKQPSISRILTGKNKDPRISTMVALEKLYLELATNSFSTSRLNKSKAK
1514068..1516305                   PHAGE_Bacter_APSE_2_NC_011551: predicted P-loop ATPase; predicted; phage P-loop ATPase; HDEF_1665(gi212499708)     0.0                 CandidatusHamiltonelladefensa5ATMQISYSVGRSVNDKRPRPAVADSFAEYQRAIKKLTKHINISPTDPKAIFDKKKKALNYIWGAMKNAKKGRNALNAGKRSVLWLDMDGCTLAAWDMLTGILRFYRCFAYTTASHEHPVAQGEQRWRIGFLLSRDVTASEYKQLGPRIEQELIDCFEWLSDLAIKWDSSVYEPSHMIFAPHEGAKYESFEGTVIDVDTLLASDNTPVIKHADDDLTRLVDLQNINDQTFEDLRSALWYPKILNQAENYPSWVDMGNRLAWFKDTHFEDEAKTMWLDWSSAAAKGDIEAAEAKWAELRADRTGYQAIFSLAQKAGWVNPGAERLKTAVATVDEFDDLTNTENSKWPTFKRNKTSGQIEATIDNAAKAVMYADFVGVEIRFDTFRDEIMFAPVGTKEWQTFTDADYSRLRITMEKRGFRAVGRELIRDVVLLAAVENPFDSAMEWLKSLEWDGIPRIETFYHTHLGTEDTTYTRAVSRYMWTALAGRVLKPGIKADMVPILVGAQGSGKSSGVAALSPDPTFFTEISFAEKDDDLARKMRGCLVAEISELRGLNTKELESIKAFVTRTHEKWIPKFKEFATQFPRRSLSIGTTNEDEFLGDKTGNRRWLPVEVGKMDVEGIKKDVIQLWAEAREVFNETGIQFQEAEQLANQVHEKYFIKDAWQEIIERWLDEPDLMTGQKPRARQFLRSADILREALNLEPKNISRREQMRMGHVLQNCNFKQVLRRVDGKVCRVWERRNDLQQPVTT
1516409..1516630                   PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; HDEF_1666; phage(gi212499709)     1.74e-44            CandidatusHamiltonelladefensa5ATMHTKHYIEGYRYLIYIYLIGKRLLRLLRLLHSFKINKLKRNNLLLIGCCRLLRLRTVKIFPFITGAKKHEQRH
1516757..1517203                   PHAGE_Bacter_APSE_2_NC_011551: Q protein; Q; phage protein; HDEF_1667(gi212499710)     1.35e-104           CandidatusHamiltonelladefensa5ATMRRDIQQVLERWGTWTRDNNAGIDWSPIAAGFKGLLPLRPSMRPSCSDEDGLIIDNCVSQLQKVRQPEELSLIIAYYVKGYSKRAIARRRRVDEGMIRAKLLIAEGFIDGCLSLLAVRLDMDPEVKIYSPQKSKKRISAVRKKFGNMI
1517574..1517738                   PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein B; HDEF_1668; phage(gi212499712)     6.22e-13            CandidatusHamiltonelladefensa5ATMYYLTNLNDNGKGSAMYDILKSSLLTGAKINAWSNLGHCDIENGKSIDALGLSN
1517900..1518304                   PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein A; HDEF_1669; phage(gi212499711)     1.44e-96            CandidatusHamiltonelladefensa5ATMAFFKPKIFVLCFIIFSYNSYAINQCINNAIVTKLIIGKPQTTNECPSDGNCIFFEYVEDENKKSGHVHNSMNLDDEGKGMAMYDILKTALLTGIRIQAWSSLNTCGFGLMYVRQGDMAYMNNEVIVESISLSN
1518686..1519063                   PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein B; hypothetical; phage protein; HDEF_1670(gi212499712)     2.55e-88            CandidatusHamiltonelladefensa5ATMTLFKSIIVTLSFILLAGNSYAMQKCISGGVVSAIQIGQSSDIGPNCPDDGNCIYFEYKEYGNKNKQQHFVERLTNLNDGGKGQAMYDMLKTSLLTGVKINAWSSTNQCYGSPQNYSVDVIGLQQ
1519315..1520304                   PHAGE_Bacter_APSE_2_NC_011551: cytolethal distending toxin subunit B; cytolethal; phage distending toxin subunit B; HDEF_1671(gi212499713)     0.0                 CandidatusHamiltonelladefensa5ATMKNFTKIVKDHFILLYKKQLVKSFSIFMFVCFFIPISYSQSHNHNRDVKDFIFGTWNTNGARWNDVRNLMVNGQFDVLAIQEAGALPTSSRNEGSVTESHDYNSIVNEAQRLCYIGEINQNDVLFGTVREYSWQTSRGESFYLYYYDRRDHYVMSNGNQYPRVNTAIITRQRADNIFFTAPIYTNQRRTNINRPIIGIRLENAVFFNVHAAPDRGGRNEAGSAVNIIRDYMAMNSPNHTWAMIGDFNRIPSELNSEILSSTPPMQTFIENVHTGESTHESPNPSSSRELDYGVLGGSASHSDHHVSAIIALYLLQLSMNPSDHKPVKFN
1520562..1521326                   PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein D; hypothetical; phage protein; HDEF_1672(gi212499714)     0.0                 CandidatusHamiltonelladefensa5ATMEAEIGMKKKSLNLKSIIVISVLLLLFSNHYTYAEKKYDFTKYCFSGRPVNHVIFNDNTPLYEWELKALNLTIVEKVFNRAKNGGGFYKKNYPSWKDWYHKSYWKTAFGYGIYDYGLEEAKGNSIYRPYGIEFNDGSFSIGFTGDDVKYGDDNWKTLSGSNWGISTERYAGQIFFDKNGRPVAIVSTDPLTGAFGSGWSYLYDKGKWEYESKDDWDNRRFGDNTESLDHNAPKFLKSSTGIMAKIFYSILHSFV
1521673..1521684                   attL                                                                                 N/A                 ATTTACCCTGCT
1521834..1522112                   PHAGE_Bacter_APSE_2_NC_011551: lambda-like group I holin; Lambda-like; phage group I holin; HDEF_1673(gi212499715)     3.67e-61            CandidatusHamiltonelladefensa5ATMPNFCQTLLDILKHRIIGAALAFMTALLRGLYQKKSFNCSLLDALMCALFGSVAHELLLFLGMKTDYTWLISIVIGYLGTDYIGSWLKKKLG
1522309..1522536                   PHAGE_Bacter_APSE_2_NC_011551: phage 21-like group II holin; HDEF_1674; phage(gi212499716)     2.34e-51            CandidatusHamiltonelladefensa5ATMSLNMSEKYATPTAYLSSLMATVLGFFTLEQWVAVTGIVCTIGTFLINVYYRKKEYKLKARHYDDTEKNPDGHRW
1522499..1522963                   PHAGE_Bacter_APSE_2_NC_011551: lysozyme; lysozyme;; phage HDEF_1675(gi212499717)     4.45e-112           CandidatusHamiltonelladefensa5ATMIPKKILMAIGGSAVLLASTMVTYFEGLRHKPYKDRGDVLTVCYGHTGKAIIPGKHYTDEECQALLDSDLKASMAVVETHVTVPLTEMQKAALASFVYNVGSGAFVRSTLLKKLNVGDRQGACDEMRRWKYDEGKVSKGLINRRAVERELCLPD
1522968..1523354                   PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; hypothetical; phage protein; HDEF_1676(gi212499718)     9.25e-89            CandidatusHamiltonelladefensa5ATMHWKLLFTAVLLITIAVLSIVIRFQYVENSRLKLANQSLSAERDAARAQFTHYEQAVDIFNTIAGATQDAHQQAIQASQPQTIKIQEAITPERCAHLPVPTAAVNRLRAHADKISPRAASAHSIHAPG
1523173..1523502                   PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; hypothetical; phage protein; HDEF_1677(gi212499719)     1.44e-74            CandidatusHamiltonelladefensa5ATMHTNRPFRHPSLKRLRYRKRLPLNAALICLCLLPLLTGCVRTPIKYLPVPPAPIPSTLLDDCSLPVISEHMTWGDSLVLNEQLLLALEMCNQDKAAIRRIEEQKNDSQK
1523576..1523992                   PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; hypothetical; phage protein; HDEF_1678(gi212499720)     3.06e-96            CandidatusHamiltonelladefensa5ATMMVSKKKMGRPSKLTVSLEKAKAYLMGEYKTVGDVVPNIAGLACYLNISRSTIYEWSSSSNVEFSDIVEGILALQENKLLNSGLKGEFNPTITKLMLSKHGYADKQETELSGKAGGAIKTDNKISIEFIGIPQRESAN
1524009..1525418                   PHAGE_Bacter_APSE_2_NC_011551: terminase; terminase;; phage HDEF_1679(gi212499721)     0.0                 CandidatusHamiltonelladefensa5ATMFKPKRIKVYFGGRGGMKTVSFAKIALITASMHKRRFLCLREFMNSIEDSVHAVLQAEVETLGLQNRFRILNTYIEGINDSIFKYGQLARNIASIKSKHDFDVAWVEEAETVSEKSLDTLIPTIRKPGSELWFSFNPAEEDGAVYKRFVKPYKAIIDKQGYYEDDDLYVGKVSYLDNPWLPAELKNDAQKMKRENYKKWRHVYGGECDANYEDALIQPEWVEAAIDAHIKLGFKPSGIRVVTFDPADSGQDEKALSKRYGVLIEDCVSWSEGDVADATMTAFDEAFDYRADDFIYDNIGLGAGTVKTHLRHSNDGNKIVVTGFGAGDSPDYPDEIYVPGNGEYLPSSNNDDRTHRDTFRNKRAQYWVYLADRFYKTWRAVEKGEYLDPEALISLSSKIAKLSQLKSELIKQQRKRTPGNRLIQLMSKDEMRLKGIKSPNMADTLMMSFANPLRITEDTEIVVPSSSSWS
1525418..1527580                   PHAGE_Bacter_APSE_2_NC_011551: portal protein; portal; phage protein; HDEF_1680(gi212499722)     0.0                 CandidatusHamiltonelladefensa5ATMAETLQKRHEQIMRKFDRAHSPQEAVREKCLEATRFARVPGGQWEGETAAGSELGKHFEKYPKFEINKISTELNRIVSEYRNNRITVKFRPGDKAASEALANKLNGLFRADYEETDGGEACDNAFDDGSTGGFGCFRLTTNLVNALDPMDERQRICLEPIYDPARSVWFDPDAKKYDKSDAEWAFCMYSLSAEKYKAEYNKDPATLMSGIERSWDYDWYDVDVVYIAKYYEVKKESVDVVSFQNPLTSETVTYDSDQLELVEDELADIGFIEAARRTIKRRRVYVSVVDGEGFLEKAQRIPGEHIPLIPVYGKRWFIDDIERVEGHIAKAMDAQRLYNLQVSMLADSATQDTGSIPIVGKSQIKTLEKYWANRNKNRPAFLPLNEIVDKQGNIIAPPTPVGYTQPQPLNQAMAALLQQTGADIQEVTGSSQAMQPMPSNIAKETVNNLMHRSDMSSFIYLDNMAKSLKRAGEVWLSMAREVYGSDRQVRIVNADGTDDIALMSVVINDNQTGQVVAMNDLSSGRYDVTVDVGPSYTARRDATVSVLTNLLAGMLPQDPMRQVLQGIILDNMEGEGLDEFKEYNRKQLLTQGVVKPRNTEEEQMVAQMIQQAQQPNAELVAAQGVLMQGQAEVQKAKNEELAIQVKAFQAQTEARVAEAKMVQILASADSAKRAEIREALKMLHQFQKEQGDASRADAELILKATDTQHKQNRDAAKNHSI
1527631..1528527                   PHAGE_Bacter_APSE_2_NC_011551: scaffold protein gp8; scaffold; phage protein, gp8; HDEF_1681(gi212499723)     0.0                 CandidatusHamiltonelladefensa5ATMENELIIDGQAIPVSKNQETPPQNTAEQPAQERENNAAQVQKVDTDNIEIKSDQEVEQDQDYSLQIGDEEISLSEEDDSIEGKPAPKWVKDLRKGFKETQKENRDLKRQLEELTTKQSHQSQVNHNNVIPDKPTLGSCDYDEEVYEKALTDWHENKSHVEQKQQAQQRQQQEVQERFIQRLKSHQQRAAKLPVKDYTEMEEVVRSEVPILQQEILIHAADEGTELIAYALGKNKALRQRLTAEHDPIRAAFLLGQISQKVKLAPKPKKTPKPEPELKGGAGNVKSDEFTQLCPGAMIE
1528538..1529809                   PHAGE_Bacter_APSE_2_NC_011551: head protein; conserved; phage APSE major head protein; HDEF_1682(gi212499724)     0.0                 CandidatusHamiltonelladefensa5ATMANNLESNISQIVLKKFLPGFMSDIVLCKTVDRQLLSGEINSNTGDSVSFKRPHQFKSERTETGDITGKDKNGLFSAKATGKVGKYITVAVEWTQIEEALKLNQLDQILSPIHERMVTDLETELAHFMMNNGALSLGSPNTAIKKWADVAQTASFIKDIGIKTGENYAIMDPWSAQRLADAQSGLHAADQLVRTAWENAQISGNFGGIRALMSNGLASREQGDFGGTLTVKTAPNVDYLSVKDSYQFTVALTGATPSKTGFLKAGDQLKFTSTHWLNQQSKQTLYNGSTAMIFTATVLEETNSTASGDVTVKLSGVPIYDEKNSQYNAVDAKVKAGDAVSIIGTAKQQMKPNLFYNKFFCGLGTIPLPKLHSIDSAVATYEGFSIRVHKYADGDANKQMMRFDLLPAYVCFNPHMGGQFFGNP
1530029..1530511                   PHAGE_Bacter_APSE_2_NC_011551: DNA stabilization gp4; DNA; phage stabilization, gp4; HDEF_1683(gi212499725)     9.34e-115           CandidatusHamiltonelladefensa5ATMTKPLTKGEIVLFALRKAGIASEATNIDVEPQSFEEGINDLEDLMAELQITFGDLGYQFSAEEENPTADDASGLPRKYKQVMGYQLMLRMLSDYGIEPTPRQEASAAAAYDALLTDTLSVPSIARRGDMPVGQGNNYTALGTASYYVERGFHAKNADPVS
1530483..1531898                   PHAGE_Bacter_APSE_2_NC_011551: DNA stabilization gp10; DNA; phage stabilization, gp10; HDEF_1684(gi212499726)     0.0                 CandidatusHamiltonelladefensa5ATMPKMQIPLAKGLVKDIKTADYIDALPVNMLATPKEVLNASGYLRSFPGIEKKQDVKGVSRGVHFNTKNNALYRVCGNTLYRNDNEVADIAGMRRVSMSHSSHSQAVCVEGKLKLYGYDGTEKALSNWPKDKYTQYDLGEVIDVCRNRGRYIWLQKGGERFGVTDLEDESKPDRYRPFYRAESQPDGIVSVDAWRDLIVCFGSSSIEYFTLTGSADTSQPLYIHQAAYMIQAGIAGRDCKCHYQDKYAILSHQSTGQPAVYLIGAGEKNKISTASIDKIIRYYSADELAASFLESVRFDNHELLLLHLPKHTLCFDGSASHQYSQWSLLKSGRYDDPYRAIDFMFFDNQITVGDKKEGVLGHLIFNASNQYGQQAEHILYTPMIKADNARLFDFELEASTGVAQIADKLFLSVTTDGINYSREQLIEQNSPFQYDKRILWRRIGRVRKNIGFKIRIITKSPVTLSDLSIRMA
1531898..1532428                   PHAGE_Bacter_APSE_2_NC_011551: DNA stabilization gp26; DNA; phage stabilization, gp26; HDEF_1685(gi212499727)     3.83e-126           CandidatusHamiltonelladefensa5ATMNRRKADNPVEIQVTHIDPTILPANFSTAYRMIVLNSLSDMGRVAGKANEAADEASQSKTKNDEQDRELATQAQRINAVQADAISKSQVDLQSLSSSLNVKTAYSVNGIKVVGQRVTGFTAATGTALKGAFHADESFSLGVTYHQSEVQALANGLVGARQRINALEAALRSHGLID
1532428..1532895                   PHAGE_Bacter_APSE_2_NC_011551: hypothetical protein; hypothetical; phage protein; HDEF_1686(gi212499728)     3.75e-113           CandidatusHamiltonelladefensa5ATMEIKVIENIEQFYRFFTDKAKVGYAMENNGEYQLKNNQLYVGVYEGLMLVGFFSIEFIRNKLIEVHPVFDPGFRGKYALRATRNFSKWLMDNLNFSTVITYVPEKTPWGKVICQLMKMRKVGVIDNALTAGHHQINMTLYQVTKEELVNGWKQRR
1532873..1533502                   PHAGE_Bacter_APSE_2_NC_011551: injection gp7; transfer; phage protein gp7; HDEF_1687(gi212499729)     2.22e-141           CandidatusHamiltonelladefensa5ATMGGSSGDNGASEQARASREAIGLQRAQWNQVMQNLAPYMKVGGPALGELQNLTTLDGQGQALNQFYHSQPFNDLANQARYQHLNAAEATGGLGSTATGNQLAAIAPALGQNWLSGQMQNYGNLVGMGMNAASGQASAGQNYANNVGQLLQNMGAANAAAANSPSGFHRALGGGMAGALTGASIGAMKGSIGGPWGAAIGGGLGLLGSLF
1533515..1534903                   PHAGE_Bacter_APSE_2_NC_011551: injection gp20; transfer; phage protein gp20; HDEF_1688(gi212499730)     0.0                 CandidatusHamiltonelladefensa5ATMATFQLAGLPSLQIENQTAGGLGLPTVPQYAERPNTGVMLAQGLGAISERLEANKQQQSEADFMKSLGTAYAANDRDAMKQLAAAHPEQIERIQKGMGFIDQDRNQMIGQAAMDLRLAAKRGDQSLIASLQKNVPLLGQFGLTPEEVFLSYKQDPQQFDKMTDLIHLHADPKSYFDVQDKQEGRNIDRNKLAETERSNRAGETLTMRGQYISGANALTAAYAPTAAMQNYRQYAEMLQSDPDAAMAFANAAGINTVSKKLMKVEKNDDGSVTKYYTDGSEETGKINQPIAGDGIKPISLPHAQSIIDKANEGSKKAAGFALRLKDSMDSMHKLGKKIDTKRVALINRALGEGAIANLSLSPVEQQYMVNARDALYAILRPETGAAITLPEMQEYAKMYLPQPGDSTLATETKMKKMQGQYNALRGQSGRVYDALVVSSAAHNQRLQSDGRYTSKSGIQFKVE
1534903..1536780                   PHAGE_Bacter_APSE_2_NC_011551: injection gp16; transfer; phage protein gp16; HDEF_1689(gi212499731)     0.0                 CandidatusHamiltonelladefensa5ATMKVTAKGKTFVFPDGTRIDGIGEAIDEYFAGQSTQSGEIANHHDNNALSSAQMANLDIPTDEILAYHDKQNPHESSQIQDPFTEAGRGLVNIPFDVLQGGANLINALSQAVGGGRLLGDIYRPVDRPADPYALAGETVGDYLIPGLGAAGKMMVGSLADASNQRGDFAQNAATNAGVNLAAQGLLSAAAKGVGKGITALKGEIAPEAAQKMMTAESMGVASMTSDMLPPQNALTRGLTQGGEGALLGTGARRAAQQTTRRKLVSDYLDRFGEYNPDTVVKSLTSNLKSRKDAAGRVIDDITQKMGVNPVETTHAVNAIDTVLPRLEKLGTSVDQNLLNTLRNLKGELTQQGGVDFDLLKQHRTAFRSNVQGDAMVFPNHAKAITNRVENAMTKDLRNSVSKSLSPQEAATYLKANSDYENVYNKVLNKRIARNLNKATREATPELINSVVYSRNASDIKRIWPALDNTGKDAVRAAYIAKIAETVGDSPAKFMTQISKLKKQAGGEIYNTVFSARHMKELEALNDVLQTTQRADTANIVTQTGQALANPLRIGAAFGSGGVSLAGEVGFGMVMRMYESRPVRNALLRLANKKTGTPAYERALNNAVKLFRPIIAASSRQQQSETQ
1536809..1537837                   PHAGE_Bacter_APSE_2_NC_011551: tail spike gp9; tail; phage spike proptein gp9; HDEF_1690(gi212499732)     0.0                 CandidatusHamiltonelladefensa5ATMSKIIPNIVVSMPTQLFTLRRKFQACSNGKIYIGKSNTDPTIPTNQIQVYIENEDGSTVPVAQPIMINHAGFPVYNGQIAKFVTVESHSMAVYDSDGAQQFYFADILKYGPNRFKEQAEKYIAYIEKLKGTTTQTTGDSTTDVMSQKACTDTFAEKNSKEPLKAGRLNLESSNGDTIFNLGGTDGSAGSVFAYVKNSRRTQIYDTATQTTLLFPQKNGTLAVEEDTYTKTEVDAKINSVKWTTNKLANGWMKDPNTGIIIQWGYTSKENITGFYYPINFPTAFSSAVYSITTSSKAHDTRGHAMFIGIAYDVTTRGFNYYVRNVVDRLEKYMDGYYWMAIGV
1537839..1538291                   PHAGE_Bacter_APSE_2_NC_011551: tail fiber; tail; phage fiber asembly protein; HDEF_1691(gi212499733)     3.81e-109           CandidatusHamiltonelladefensa5ATMETSYRFEDQMYFSCKDGLGWLAESLKDEYIKNGSWDSRAKPVSFQVYAEYALGNSPEGKMLGSTDDGYPCWVDIPPKTKHQLITEAEDKKSGLMQGAREVISPLQDAIDLEMATQEETQKLTAWKRYRVLLNRLDTSNAPDIDWPKKPE
complement(1538746..1539891)       PHAGE_Bacter_APSE_2_NC_011551: integrase; integrase;; phage HDEF_1693(gi212499734)     1.41e-164           CandidatusHamiltonelladefensa5ATMSIKMRYGIWHCDFVTSNGQRIRQSLGTADKKEAQELHDKLKSNAWRENKLGEIPQKTFEEACVRWIKEKQHKRSLDDDKTKIAFFLLHFSKKSLSNITEDEVTHVISEMKNRRHQQRWVSIKRASLKTGYQVPDFNDKAVSPATRSQYLSFMRGLMRIAANEWGWLAKPLNLKVRKPNDKRVRWLSREEANRLISVVNQNFRPIVIFALATGLRRSNIIHLEWQQIDMERKVAWIHPEQAKAGKAIGVALNETACRVLREQLGRHSRWVFVRKKTVQGREGEKQDLVSKFRVDDNRAWKTGLKKAGIENFRFHDLRHTWASWLIQSGVPLSVLQEMGGWESIEMVRRYAHLSPSHLTEHAKKIDEALANDVTNLALLNNS
complement(1540111..1540584)       PHAGE_Strept_P9_NC_009819: helicase; HDEF_1694; phage(gi157311154)                   1.16e-50            CandidatusHamiltonelladefensa5ATMEEMIQEAAGQPVLVAYNYQSDLALIKVRFPKAELIGHAADTIDRWNTGKIPLLLAHPASAGHGLNLQSGGNIIVWFGLNWSLELYQQFNARLHRQGQTRPVFIHHLVMNDSIDLTVLEALENKHITQKALLDALKKDISGRLAPDLNLKLRGKQNE
1541856..1541999                   hypothetical protein; HDEF_1696                                                      N/A                 CandidatusHamiltonelladefensa5ATMTKLLQHHAQYYDQIKINGKKHRPWILVKGKKLDNKEIRESVKQCGI
1541987..1542256                   hypothetical protein; HDEF_1697                                                      N/A                 CandidatusHamiltonelladefensa5ATMRNLKVAAKWHLKSTGAPDIFYIISNVYLEKVAGGRWQVAGGRWQVAGGTYFLLMRKKKNNKKYYVVYMFFISATLRTVPPIKREHRIA
1542365..1542511                   hypothetical protein; HDEF_1698                                                      N/A                 CandidatusHamiltonelladefensa5ATMPPYFGVGDENSKSDLNVFIGGVKKYQFNKDQGVYQNMWIKKVATGCR
1542832..1543176                   PHAGE_Rhizob_RR1_B_NC_021557: hypothetical protein; HDEF_1699; phage(gi514231154)     1.95e-08            CandidatusHamiltonelladefensa5ATMNVLHEIAEVIGPDMAVKLGQLMGGARLYVPAKVTEDHPFSLVLGANTAQKLCDYYCGDVIEVPCKKVFRQVRNDIISREYHSMTPEKENRANILALKYGLTSRQVLNIARLAA
1543367..1543852                   PHAGE_Pseudo_PaMx74_NC_028809: putative endolysin; HDEF_1700; phage(gi971745296)     5.98e-50            CandidatusHamiltonelladefensa5ATMAYKLGPRSRQRLEGVHPDLVCVVERAIQITPVDFTVLEGVRTVERQKTLLAKGASKTMNSRHLTGHAVDLGACLDGSVRWDWPLYYPIADAMKQAAEELGIRVYWGACWSCINDEDNLSDAVIAYIERKKAVGKKPFMDGPHFELSSSDFPDNECLEEAS
1543831..1544256                   PHAGE_Salini_M31CR41_2_NC_042352: membrane-associated initiation of head vertex; HDEF_1701; phage(gi100034)     5.62e-09            CandidatusHamiltonelladefensa5ATMPGGGLIMAVWPFLSGLVQPVTQLIDEMHTSDEERLQVKSRLFEMQSAMAAQMLNYEARLVETKTKVIAAEAQGASWMQRNWRPLTMLTFLGLVVADTFGLTEFRLAQEAWTLLQIGLGGYVVGRSAEKVIPKLTELMRKD
1544418..1544696                   PHAGE_Burkho_AH2_NC_018283: hypothetical protein; HDEF_1702; phage(gi399529082)      1.16e-07            CandidatusHamiltonelladefensa5ATMNPPNGRREWHLDKTVSIGHIISTLVIALSLFSWALTIDKRVEQNAQSIEFLAQNHKRLENHVDSTRNEIRQDLRAINAKLDRLIERRMDGQ
1544693..1545226                   PHAGE_Escher_HK639_NC_016158: terminase small subunit; HDEF_1703; phage(gi356870601)     1.69e-09            CandidatusHamiltonelladefensa5ATMMANIIDWLGVETEYRAGLQSLRKMATEFGTSEGTIRRRAKQYGWVRDGSMVKRERVKAHFAGKPAPEVANQPEAVVKAIDAAAIEDIKDMGTGLENARLALEIANKALKRLAEEKQYLHLIVQDARNLKVLTETNRHNVEVIRRIRGLDDPATNDRIPLSEVDDVIIERYLHARTQ
1545210..1546649                   PHAGE_Idioma_1N2_2_NC_025439: putative large terminase; HDEF_1704; phage(gi712913802)     1.77e-77            CandidatusHamiltonelladefensa5ATMHVPNKAQFYEAMLRDDLSSFIQRTFATVDPGAQYLHNWHVDLIAEYLKACTDRDIKRLIINIPPRYLKSIAVSVAWPAWVLGHAPSSKFLASSYSDKLALKHSVDCRLVVQSAWYRRVFPCVGLVKDQNEKSRFVTTARGHRIATSTGGTATGEGGDFLIVDDPHNPRQAESPTEREKALEWFDQTFYSRLNDKKNGVIVVVMQRLHEKDLSGHLLAQGGWEHVKIPAIAESRTMIDFGRIRKTRSPGELLHPEREGKPEIAKTQTALGTYGFSGQYQQEPVPAEGGMIKKPWVHRYKTPPAHPVRIVQSWDTAYKSAQLNDPSVCTTWAETQLAYYLLEVWRDRVEYPRLKSAVKSLAEKWHPNAILIEDKASGQSLIQELKASTPLPIIAITPEQDKLTRMSAQSAQFEAGKVFIPDSAAWLLDFEKELFTFPLAEHDDQIDSTSQFLGWVSNQQQSYGYSPVKGDGHRFKRQGAW
complement(1547123..1547527)       ISHde1, transposase orfB; HDEF_1706                                                  N/A                 CandidatusHamiltonelladefensa5ATMPRLYGYATRGQRCFGTHDWQAKGRTNVIGALLGVTLIAVGLFNCSINSDVFYAWVTQLLLPALPHPCVMMMDNASFHKRKDIQHAILNAGHSIEYLPPYSPEFNPIEHTWAQAKRKRRELQCDINTLFSEHIM
1547566..1547577                   attR                                                                                 N/A                 ATTTACCCTGCT
complement(1547568..1547945)       ISHde1, transposase orfA; HDEF_1707                                                  N/A                 CandidatusHamiltonelladefensa5ATMSYSVDFRQKVLSIREKEGLSIRATAKRFHVGTDTLRRWLKRIEPKPSGPRRGKMDKEAFIKDVAEYPDSYQRERAARFGVCPKAIWQALKRWGLTYKKNSASSQGKRRGTTGVPGKNRGVSKAG
1549401..1549664                   PHAGE_Entero_HK022_NC_002166: integrase; HDEF_1710; phage(gi9634144)                 8.81e-21            CandidatusHamiltonelladefensa5ATMEKIHGPNRKNSRDLSPHLHVRHQGYYCYRDPRTGKEYGLGKEKRMAINEAISANRQIFDAPVSLNDRINEVKALSMTEWMEQFTKK
1559532..1559543                   attR                                                                                 N/A                 GCATAACCCTGT
1562593..1562604                   attR                                                                                 N/A                 TATAAAAAATTA

#### region 7 ####
1815016..1815029                   attL                                                                                 N/A                 TTTTTTAATTTAAG
1824076..1825260                   PHAGE_Bordet_BPP_1_NC_005357: reverse transcriptase; HDEF_2000; phage(gi41179367)     2.43e-07            CandidatusHamiltonelladefensa5ATMPMANVINQNYEQQLEWHAINWRVVTAMINNLRQRIYRASATGDLKKVRNLQKLMMKSRANHLLAIRKVTQVNRGKHTAGVDNQVINDHKGREHLYKLLSQTTSEKVYPVKRVYIAKKNGKKRPLGIPTILDRCRQAIVKSALEPYWEAKFEPVSYGFRPGRSAHDAIQKIFCIARARGTRHWVLDADIKGAFDNIDHNFLIKKIGGFPERNMIKQWLQAGVLEHGNYIPNVAGTPQGGIISPLLANIALHGMETLLGIQYWKNGTPKQGQPYAVVRYADDFVVFGKSREECETAKIKLQIWLAQRGLALSEEKTSIKHLKEGFDFLGFNIRHYDNRHRKRGYILLTKPSKESMKRYKQQMRMTWKGIIGMPTQEGIRQLNAKIIGWCNYYRID
complement(1825337..1827019)       PHAGE_Bordet_BPP_1_NC_005357: reverse transcriptase; HDEF_2001; phage(gi41179367)     2.09e-07            CandidatusHamiltonelladefensa5ATMPMANVINQNYEQQLEWHAINWRVVTAMINNLRQRIYRASATGDLKKVRNLQKLMMKSRANHLLAIRKVTQVNRGKHTAGVDNQVINDHKGREHLYKLLSQTTSEKVYPVKRVYIAKKNGKKRPLGIPTILDRCRQAIVKSALEPYWEAKFEPVSYGFRPGRSAHDAIQKIFCIARARGTRHWVLDADIKGAFDNIDHNFLIKKIGGFPERNMIKQWLQAGVLEHGNYIPNVAGTPQGGIISPLLANIALHGMETLLGIQYWKNGTPKQGQPYAVVRYADDFVVFGKSREECETAKIKLQIWLAQRGLALSEEKTSIKHLKEGFDFLGFNIRHYDNRHRKRGYILLTKPSKESMKRYKQQMRMTWKGIIGMPTQEGIRQLNAKIIGWCNYYRIGASKRTFSALDQWMWIRQRRYLYRRHPNKHWWWRRKHYLGKIPGREDYSVFMDKSTGGFLWKHAWTKIQRHWLVPKNASPDNPELRDYWRNRQARKQPFIYGVKVNLYKRQKGYCPLCDQELDNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQLHSKKGKMLK
1827639..1828103                   PHAGE_Mycoba_Mutaforma13_NC_041847: baseplate hub subunit; HDEF_2002; phage(gi100107)     8.72e-06            CandidatusHamiltonelladefensa5ATMWIRQRRYLYRRHPNKHWWWRRKHYLGKIPGREDYSVFMDKSTGGFLWKHAWTKIQRHWLVPKNASPDNPELRDYWRNRQARKQPFIYGVKVNLYKRQKGYCPLCDQELDNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQLHSKKGKMLK
1829128..1829943                   PHAGE_Bordet_BPP_1_NC_005357: Bbp38; HDEF_2004; phage(gi41179398)                    4.48e-44            CandidatusHamiltonelladefensa5ATMLRGRQLRCIQLTPSASAVMGKGVRVEAENNPQALLYALGALNEYEFIFDHITTFKLAMVQPRLDHISEHEISRDELLVFGEQAKKRAALALAPHADFRPDPKACKFCRAKARCRALAARSLQVAAQEFQNVVTPIALKDITLLNNRDIAALLPQLNMMADWIKSVEATALQELEQGRDIPGYKLVTGRSIRKWRDEAQAEQSLRKTHLKVAEIFTQKLVSPAQAEKLLGKKHPLLDELAIHPQGKPILAPESDKRPALRSSVEEEFKKVA
1830015..1830407                   PHAGE_Pseudo_PaMx74_NC_028809: putative DNA polymerase; HDEF_2006; phage(gi971745275)     3.43e-21            CandidatusHamiltonelladefensa5ATMMDYISHDLGYPLMQFDKAILGEVLKDDTLPDTDRRLIEIRQQLGKTSTAKYAALKALVMNDHRAHGLLMYHGASTGRWSGRHFQPQNLPRPSFKNTDVCIELFQYQNAQLLEMIYNDSMEALSSCLRAR
complement(1830359..1830709)       phage integrase; HDEF_2007                                                           N/A                 CandidatusHamiltonelladefensa5ATMGSKNNHLGRSITLGQYLDISNRAYELMGKPQERSQKVFKGLRYSAWHNTALLQWSLRAGITKHITFHSGRHTFAVLQLADLPAMPKPELQSLSNQTPSTAYLARKQELNASIESL
1834778..1834791                   attR                                                                                 N/A                 TTTTTTAATTTAAG

#### region 8 ####
complement(1996160..1997080)       PHAGE_Erwini_ENT90_NC_019932: phage tail collar domain protein; HDEF_2201; phage(gi431810938)     2.55e-26            CandidatusHamiltonelladefensa5ATMTDLTELSQWEDGIYQIETRDPVLGGPEGIANRQAQQLGNRTTFLKKGQDRLNTEFYHHREEEDPHPVYALKKSPDFTGEPKAPTPEFKNSSRQLATTEFVTRAVNALTDGAPEALDTLKELAKALGEERDFSTQILQQLSQKLSKNDHGADIPDKAQFIKNLGLSETVDCAKNALDKRHGGEVQGQIQVNDTLRVSKNGKTATYQEDGNIDGECWGGLLNQWITTKITEAVQSRAPWEEVNRTFVRDIRLSSVQLMSVQTYDRQLSAGAVVTGFKTNGLWEMKSYAYYRFIQKNINGQWITVGQG
complement(1997135..1997539)       ISHde1, transposase orfB; HDEF_2202                                                  N/A                 CandidatusHamiltonelladefensa5ATMPRLYGYATRGQRCFGTHDWQAKGRTNVIGALLGVTLIAVGLFNCSINSDVFYAWVTQLLLPALPHPCVMMMDNASFHKRKDIQHAILNAGHSIEYLPPYSPEFNPIEHTWAQAKRKRRELQCDINTLFSEHIM
complement(1997580..1997957)       ISHde1, transposase orfA; HDEF_2203                                                  N/A                 CandidatusHamiltonelladefensa5ATMSYSVDFRQKVLSIREKEGLSIRATAKRFHVGTDTLRRWLKRIEPKPSGPRRGKMDKEAFIKDVAEYPDSYQRERAARFGVCPKAIWQALKRWGLTYKKNSASSQGKRRGTTGVPGKNRGVSKAG
complement(1998008..1998517)       PHAGE_Escher_vB_EcoM_ECO1230_10_NC_027995: putative phage tail protein; HDEF_2204; phage(gi937533297)     2.03e-29            CandidatusHamiltonelladefensa5ATMRETLLPPNATQEERGIEAATARLGKIPIEIGRLWNPETCPADLLPWLAWALSVDQWDSDWDERTQREVIQHSARAHRYKGTLSSIRSLLRGPGFGEVTVIEGVGREQPVSGDPELWACYRVIFQRLITAAEAKMLKKSLKAWAPARCHLVSLEYPPFHYDFSQQARYS
complement(1998519..1999400)       PHAGE_Escher_vB_EcoM_ep3_NC_025430: tail protein; HDEF_2205; phage(gi712913208)      4.15e-105           CandidatusHamiltonelladefensa5ATMTNAIHLAILPDPDVVQPLDYDSILSEMLADLRHRAPELTALVASDPAYKILEVAAYRELLLRQRVNDAGRSVMLAYAKGKDLDHLAALFGVSRLVIDPGNPDAIPAFPATYEDDERLRQRIPLSLEGYSTAGPIGAYVYHTLAASGDVKDVSVTSPSPGEVRVTVLSMDEKGVPDAALLQAVTERLNHEAIRPLTDHITVQAADIIEYHISAHLTFYPGPDRSVVAEQSRIKVTEYATQQHQLGFDVTLSGLYAALHQPGVQNVRMTSPAEDILVRAHQAAFATAIHVSEGG
complement(1999397..1999732)       PHAGE_Pseudo_PPpW_3_NC_023006: putative baseplate assembly protein with lysozyme; HDEF_2206; phage(gi564292493)     9.16e-44            CandidatusHamiltonelladefensa5ATMNGVNRTTGQILKGHAHLRQSITDILTTPVGSRVMRREYGCRLFEWVDAPLNENTMAEMVAATAEALERWEPRFRLLHVGVTRVKEGHITFDLVGEYLPEGKELKLEGLVV
complement(1999729..2000307)       PHAGE_Pseudo_phiCTX_NC_003278: predicted baseplate; HDEF_2207; phage(gi17313235)     2.24e-31            CandidatusHamiltonelladefensa5ATMINHILQRLAEVERRLSNIFFIGTITDADYHNALVKVEAGPLETGWLHWITARASHDVDYWAPEIGEQVLLLCPDGEPELGVVLPALYQNPFPATDNRPTVRRTRFADGADLSYDREAHAFKISLPEGATTALISQGGIAIVGDVHVTGHIRATEDITDHTRSMQADRDIYNGHTHRSPETGAETSTPGAPQ
complement(2000304..2000807)       PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; HDEF_2208; phage(gi481019159)     6.42e-10            CandidatusHamiltonelladefensa5ATMDKINAQLPELKAVAPHPGRFNLDELKRIATQLPAVRVALMGMPRVHMLETGENEAVLRLAAFVVTGDRRQLPKDEAALAIVESLLVLIPGQRWGVTGTIDAKGVKADNLFSGQVERQGVAMWAVTWEQSIRIGQDVWDGGILPSTVYVSDDVEHFGDEMAYDKVLG
complement(2000835..2001284)       PHAGE_Vibrio_12B12_NC_021070: phage virion morphogenesis protein; HDEF_2209; phage(gi481019160)     4.27e-25            CandidatusHamiltonelladefensa5ATMAGVGASLELCGIERLNPLLDRLGGIDPQQVLSVLGNLVEKQTVDRFIDEKESPDGDKWPEWSQGYAKSRHRHQNLLQSSGDLIDSIQSVFGLGRTDIGTNLMYAARHQFGDTKRGIPQREFLGISADNLVELQNTLQDWADQLIQGAL
complement(2001284..2001712)       PHAGE_Entero_SfMu_NC_027382: hypothetical protein; HDEF_2210; phage(gi849255266)     2.92e-21            CandidatusHamiltonelladefensa5ATMLYATLEEMTHRVGEDFLYTIADRNNDDRVDMTTVEHALSDASGLMDSYLSTRYPLPVIHFPDLLKRLCVDIAVYWLAQDGGGTTEEKRQRYEDAVAWLERLAQGKAQLPVTDSETTTPTGTEGACSHSHPRWFSRHQLRAF
complement(2001719..2002003)       hypothetical protein; HDEF_2211                                                      N/A                 CandidatusHamiltonelladefensa5ATMFASEGKMIERSNFTEHQWAQIKAEPLLSVMEGAEAPVDDTPGERIENIVEAIGIIDPDKKPPVKDLENVMGQDITAAQRDRAWAIYQKRIAEG
complement(2002005..2002787)       PHAGE_Vibrio_12B12_NC_021070: I protein; HDEF_2212; phage(gi481019166)               6.94e-56            CandidatusHamiltonelladefensa5ATMAGTTTHTFALNTELRPLLEATAAQKGTPLWVELIPFGEQITGRDGRSWVNDHPQGGVDAFQANQADLPIDIEHATELKAPKGDPAPAVGWIKGLEVRDGGSIWGWVEWNPQGRSLMEEKSYRYLSPVFTFDTHTKRILQLYSAGLTNQPNLHLTALNQRIQPAGEPAMTLPLALCTALGLSAQATEAQAVSAIHQMKTDKDKALNRASHPSLEKFVPRADHDAALNRAQAAEIRLREIEHRALHQLYSFKEPAGLSPCG
complement(2002914..2003213)       PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; HDEF_2213; phage(gi100019)      4.20e-23            CandidatusHamiltonelladefensa5ATMTMTKKLTPFDPAEHLKSDQAIADFMAGAFETNDPGFIAHALGIIARAKGMTQIASQTGLSREQLYRSFSAEGNPTLRTTLVLMKALGIELSAKPTAVH
complement(2003210..2003506)       PHAGE_Brucel_BiPBO1_NC_031264: hypothetical protein; HDEF_2214; phage(gi100020)      7.27e-30            CandidatusHamiltonelladefensa5ATMIELKQTETFRKWYTKLKDERATTAISLRLARLAYGHLGDAEPIGKGVSELRIHYGPGYRVYFQWRGDAVIVLLFGGDKGSQGRDIKTALRLADEWRE
complement(2003548..2003679)       hypothetical protein; HDEF_2215                                                      N/A                 CandidatusHamiltonelladefensa5ATMEEVPVGIDPGWNVHPGKARLSHTQTLGKEKDIEFRSIVGTIR
complement(2003661..2004305)       PHAGE_Vibrio_12B12_NC_021070: F protein; HDEF_2216; phage(gi481019167)               2.32e-65            CandidatusHamiltonelladefensa5ATMTPTAPPPPREALAYLRAKGYKIAWDYRDLWKEEHVRAFTVAKAMTQELLMEIRQAVDAALAEGKTFKQFQDELEPLLGKRGWLGKVLMEDGAMIELGTPRRLKIIYDTHMRTARAAGQWVRIERNKAALPYLRYGLGPSREHRLQHVQWEGLILPVDAPFWDTHLPPNGWGCRCRVRQMTERQASQRGGVSEAPEKKPLFGKTGVLAKWKKCR
complement(2004305..2004751)       PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; HDEF_2217; phage(gi481019168)     6.75e-06            CandidatusHamiltonelladefensa5ATMRTSGLEGNIFIELLITKSPLMPRLLPLRTKLGLSEPAKEADLLSVSTTPAQASATNRAQGCACSNRAINRNQPDDIEVLAEEMLTDWEPQITPVTAPVMEAIKRVEDYDQLRALLPQLLDKADVKKLTESLAQAGLMAYGTGVEGQE
