gi|294679055|ref|NC_014035.1|  Rhodobacter capsulatus SB 1003 plasmid pRCB133, complete sequence. 132962, gc%: 66.47%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
12660..12671                       attL                                                                                 N/A                 CGGTGGGAACAC
15453..16223                       PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; RCAP_rcp00021; phage(gi100148)     7.84e-06            RhodobactercapsulatusSB1003MKAVILAGGRGTRLSEETGRRPKPMVDIGGQPILWHILKIYAAHGVNEFVLCLGYRGWQIKDYFLNSARLSSDLTVDLASGVVEMLRPASEPWKIHLIDTGEDTQTGGRLKRVGHLLRDDDAFCLTYGDGLGDVHITAAIAFHRAHGKAATVTAVVPPGRFGALDRQGDRVSAFVEKPAGDGGTINGGFFVLSPSVLDRIEGDATVFEQELLKGLARDGELRAFDHRGFWQPMDTLRDRDHLQALWDGGAAPWKIW
16208..16474                       hypothetical protein; RCAP_rcp00022                                                  N/A                 RhodobactercapsulatusSB1003MEDLVRRPDPGVWAGKRVLLTGHTGFKGAWAARMLTLLGAEVTGLALDPAPGPSAFAALAVGQCWPNWSRAAFPFTRPPVPPAPRNPA
16396..17232                       NAD-dependent epimerase/dehydratase family protein; RCAP_rcp00023                    N/A                 RhodobactercapsulatusSB1003MLAELVARGIPVHATARSPGSAQPGVIWHTADLREGAERARLLAGSPAKQLLHCAWEIEHGAFWTAPANDLWRRVSCDLAREFLAAGGERVLALGTCAEYDPLAPSALAAVRLVAPITPYGQAKASLHEELGRICGPRLIWARLFHLYGPGEDRRRLVPSLIDAAREGRPAEVRAAGLIRDFASSAHVARALVGLMDSGATGAFDIGSGQSRSLGALARIIAEAAGRPDLLRLSHTPGPQDPAELTPHFAALAAVSGLKPEHPLQALTEHVRREIGAA
17278..17541                       hypothetical protein; RCAP_rcp00024                                                  N/A                 RhodobactercapsulatusSB1003MRRRLGTITGVSPPSYLREAFRRAPHERLLGPVAAVRSKGRFEAWRSMMRPSAEGRDARYCIVSQLYWGTALPDACQSRDAITRRGR
complement(17548..18006)           PHAGE_Strept_YDN12_NC_028974: hydrolase; RCAP_rcp00025; phage(gi971762176)           1.15e-14            RhodobactercapsulatusSB1003MSADKTSLSSAQAAARPIVATIATVFRDGHVLLVRRANPPDAGTWGFPGGKVELGEPLEKAALRELFEETGIEARAERVFTALDAFDRDEAGALRHHHVLVAVLCSWVSGEPVAGDDALEARWFPLHALEAGDLALSRDVAKLARQGAEIAT
complement(18110..19000)           PHAGE_Burkho_phi1026b_NC_005284: gp58; RCAP_rcp00026; phage(gi38707948)              1.46e-11            RhodobactercapsulatusSB1003MEAGLKALEAVQAIARRGSFRAAALDLGLSTTALSQTIARLEANLGVRLFNRTTRSVSLTEAGRDFAARTAPALAEIRAAMERVRAQRDTPSGRLRINASAQGGRAVAPLVLEFLNSHPQMQVDLVTEGRLVDIVAEGFDLGIRPADLVPRDMIALPLGAPARHAVVAAPGWLARHPSPLSPADLDPDHCLRVRLPNGALLRWPFEKDGRALPFEARGRLTVDDPAIARAAVLDGAGIGYFIEADVAEDIAAGRMVRLLADWTPNRPGFSLYYPGRRNASAGFTAFLALARQRAGA
19099..19425                       hypothetical protein; RCAP_rcp00027                                                  N/A                 RhodobactercapsulatusSB1003MIPLPAPIRTYFTAQAPQEAAAFAAAFAPEATVEDEGARHHGPEAIRQWWLATKAKYRHSAEPLEITEEGDKTVVRARVSGDFPGNPVVLRFRFGLTGERIRDLRIGG
19422..20201                       PHAGE_Xantho_Carpasina_NC_047962: primase; RCAP_rcp00028; phage(gi100047)            1.25e-05            RhodobactercapsulatusSB1003MTGFLNLRGKRALITGGTQGAGAATVALFRDLGAQVLTTARNRPETLPEAMFVAADLSTVQGCERVARAVQDRMGGVDVLVHMLGGSTAPGGGFAALGEAEWQAELNLNLMPAVRLDRALLPGMVAQRAGVVVHVTSIQRLMPLPAATTAYAAAKAALSVYSKSLSKEVAPAGLRVLRVAPGWIATAASIRLAGRLAEAAGTDLEGGKRMIMDSLGGIPLGRPSTPEEIASLIAFLASDRASSITGTEHVIDGGTVPTA
complement(20288..20632)           PHAGE_Burkho_phi1026b_NC_005284: gp80; RCAP_rcp00029; phage(gi38707970)              2.54e-10            RhodobactercapsulatusSB1003MTEMVTIPREEYDRLLAAAEDLADLQSYDRAKARLAAGEDELIPADYANRLLNGESALRVYRDLRGLTQAALAEKSGVNRVTVAEIETGRKQGSIATLRALADALGVSLDDLAA
complement(20629..20934)           PHAGE_Burkho_phi1026b_NC_005284: gp81; RCAP_rcp00030; phage(gi38707971)              1.58e-15            RhodobactercapsulatusSB1003MLDFGRNVAQSYIMKQISTTKAAIKALRRMPSTTAALIRAKIEAYAQDPSAQANNVKPLKGREGIRLRVGDPRVIMDDQGNVLVLLDIGPRGGVCDGKGLR
complement(21012..21620)           PHAGE_Clostr_phiCD6356_NC_015262: putative site-specific recombinase; RCAP_rcp00031; phage(gi326536904)     8.02e-10            RhodobactercapsulatusSB1003MAIETLPALRPTHAPWNKGRIVGQKLPLQPKHVWSICLRLEMADNRRDLALFNRTVDSKLRGCDLVGLRVNDIYAAGHVKERASVTQSKTRKPVRFEITEITRLALERWIKDPEMIGNDYLWPSRVHASPHLSTRQYARTLRDWVLSIGLEPSAYGTHSMRRTKVAQITKKTGNLRAVQLLLGHDPRWTAQFDIWGSIWRMR
21967..22155                       sensor histidine kinase; RCAP_rcp00032                                               N/A                 RhodobactercapsulatusSB1003MQPPESAAEGVRAGFSTRRASGGTGMGLAVVRNLLSAHRGGISLATSRPTRFRITFDADPRI
22237..22740                       hypothetical protein; RCAP_rcp00033                                                  N/A                 RhodobactercapsulatusSB1003MFIAHLPAGYLLSRQIAKSHPAKGALIATGLLASVLPDTDLFWFYLVSDRQSVHHGYMFHWPLFWGLIAALSWGLSRALGAHGAGSFILVALANLLLHLALDSVAAGVGWLRPLSTIEVNLVEVPARHNWWVWNFVLHWTFGLELAIILAAGLTLRRDLLRRRPATP
22833..23123                       PHAGE_Sinorh_phiN3_NC_028945: hypothetical protein; RCAP_rcp00034; phage(gi971759252)     7.18e-15            RhodobactercapsulatusSB1003MLLSPRQPVPASGDMEKLAHALDRLGVAYSWHKVVPFVGDLIPEPEVRNPGYAPAYVMDICSTETGLKLLETNCINAAGFYAADVMKLAAAIDALG
23143..23601                       hypothetical protein; RCAP_rcp00035                                                  N/A                 RhodobactercapsulatusSB1003MGFVLRHLLLFFLPIVLAVGLDVATAPLRRQLYQQSGVFLRDLFSNDPERVRTTLESLGQGGISLSESLDWGLRAAVVIGFLAFSLLIPKSASSQSAVNFLTTLCVGFGFAKLNGGFAGLDWVELGLCLIIGLCLAVVALTRRLTSLARPAR
complement(23613..24362)           hypothetical protein; RCAP_rcp00036                                                  N/A                 RhodobactercapsulatusSB1003MRIGRAARHLALAAVLTVLTQLGGLAWLISRLFRRKLLAFALLYAALWLGALMIAPHFRRVPITCHGEGPLGMRSWVFCLANRNYVAPELKAAATDMATEMARTHPGTVTLALDGNFPFLNGFPLLPHLSHKDGRKLDLAFYYADHGRYLPGQTRSPLGYFAFEPGPRTCPPRFPTLRWDLDWLQPLWPDYAPEPERMRLALRLLSRDPRIGKIFLEPHLAAKFGAGASKIRFQGCAAARHDDHIHIQL
complement(24359..24985)           PHAGE_Caulob_CcrSC_NC_048048: hypothetical protein; RCAP_rcp00037; phage(gi100495)     3.40e-51            RhodobactercapsulatusSB1003MTKKYPRTFHLPISPGASSDDKIMNSLEGLICDDLVITEKMDGENTTLHRGGCHARSPDSRNHPSRDWLKAFAAGIAPQLAEGERIVGENLYARHSVGYDTLPAWFLGFAWIRGDEVQPWDLTLMRFEELGITPVPVLWRGPWRPGLFETIAAGLDPVRQEGFVARVATAFSEAEMPRRMGKYVRAGHVQSETHWMQAALVPNGLRDA
38321..38332                       attR                                                                                 N/A                 CGGTGGGAACAC
