gi|392376213|ref|NC_014796.1|  Chlamydophila psittaci RD1, complete genome. 1164076, gc%: 38.77%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(362425..364026)         PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; Cpsi_3191; phage(gi371496158)        1.56e-08            ChlamydophilapsittaciRD1MLCAMSIVLDKIGKTLGTRVLFDDVSVVFNPGNRYGLTGPNGAGKSTLLKIITGCVEPTRGSISLPKKVGILRQNIDSFGDVSVLDCVIMGNARLWDALQKRDALYLEEFTDAIGIKLGEMEEIIGEENGYRAESEAEELLTGIGIPEALFNNKMSTIPIDLQFRVLLCQSLFGHPEALLLDEPTNHLDIHSINWLGNFLKDYDGTVIVVSHDRHFLNTITTHIADIDYDTVIIYPGNYDAMVEMKTASRDQEKADIKSKEKKIAQLKEFVAKFGAGSRASQVQSRLREIKKLQPQELKKSNIQRPYIRFPLSEKASGKIVFSLEGITKSYNDEAHLFQPFSLEIYQGDKLGIIGNNGLGKTTLMKLLAGVESPTQGSIKTGHQVAYSYFPQNHSDVLKDCGDETLFEWLRNRKTGINDQEIRSVLGKMLFGGDDAFKKIKALSGGETARLLMAGMMLENHNTLILDEANNHLDLESVSALAWAINDYKGTSIFVSHDRTLIEECATKLLIFEKGKITFFDGTMADYTSSRKL
363883..363896                     attL                                                                                 N/A                 TAAGGTAGACTTTC
complement(364067..365005)         PHAGE_Bacill_Mgbh1_NC_041879: hypothetical protein; Cpsi_3201; phage(gi100037)       5.38e-28            ChlamydophilapsittaciRD1MVSAFYAFLDYLKNIKTASPHTLRNYCIDLNDFKNFLEKHGELTPSPPICLVTKERQEAELPFSLLTKDAVRLYILKLMQENKAKRTIKRRLSAIKSFSQYCVKHRILPEDPTETIQGPRLPKELPSPITYEQVEILMATPDLSKYTGFRDRCLLELFYSSGLRISEIVAINHWDIDFTSHLIRIRGKGKKERLVPMTPHAAQWLQQYLTHPARTGIEKDSQAIFLNRFGKRLTTRSIDRKFQKYLRQSGLSGNITPHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYTHVSMKLKKQTHDESHPHS
complement(365050..365970)         putative hydrolase; Cpsi_3211                                                        N/A                 ChlamydophilapsittaciRD1MSCRELVILGCSSQQPTRTRNQGAYLFRWNNEGLLFDPGEGTQRQFIFANIAPTVVSRIFISHFHGDHCLGLGSMLMRLNLDKVTHPIHCYYPASGKKYFDRLRYGTIYHETINVIEHPIDKEGIVEDFGNFRIEARKLNHLVDTLGWRITEPDTVKFIPEKIKAAGLRGPIMQDLLRNEQVTVNGKTLYLKDLSYIRKGDSIAVIADTLPCPSIVDLAKNARIMLCESTYLEEHRHLAESHYHMTAKQAATQALAAGAQQLVLTHFSARYLNSKEFEIEAGKIFPNVTAAEEFRSYPFPKNPSSK
complement(366886..369342)         PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; Cpsi_3221; phage(gi100292)     8.90e-05            ChlamydophilapsittaciRD1MDSTINNDSQILDPNPEEVEKLLDESEEVEEKSDDRSLPSDLFILPLNKRPFFPGMAAPILIESGPYYEVLKLLAKSSQKYIGLVLTKKEDADILKVGFNQLYSVGVAARILRIMPIEGGSAQILLSIEERIRIVEPLKDKYLKARVSYHKDNKELTEELKAYSISIVSVIKDLLKLNPLFKEELQIFLGHSDFTEPGKLADFSVALTTATREELQEVLETTNMHDRIDKALILLKKELDLSRLQSSINQKIEATITKSQKEFFLKEQLKTIKKELGLEKEDRAIDLEKFMNRLKKRQVPDYAMEVIQDEIEKLQTLETSSAEYTVCRNYLDWLTIIPWGIQSKEYHDLKKAEIILNKDHYGLEDIKQRILELISVGKLSKGLKGSIICLVGPPGVGKTSIGRSIAKVLHRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKMVQALKQSQAMNPVIMIDEVDKIGASYHGDPASALLEVLDPEQNKDFLDHYLDVRVDLSNVLFILTANVLDTIPDPLLDRMEILRLSGYILEEKLQIATKYLVPRARKEMGLTAREIVFQPEALKHMINNYAREAGVRTLNGNIKKVLRKVALKIVKNQEKAHPKHTQYKINVKNLQDYLGKPIFSSDRFYDHTPVGVATGLAWTSLGGATLYIESVQVPSMKTDMHLTGQAGDVMKESSQIAWTYLHSALERYAPGYSFFPKSQVHIHIPEGATPKDGPSAGVTMVTSLLSLLLDTPILENLGMTGEITLTGRVLGVGGIREKLIAARRSRLNVLIFPEDNRRDYEELPAYLKKGLKIHFVAHYDDVFKVAFPHIN
369990..370631                     PROPHAGE_Escher_MG1655: protease specific for Gcp(YgjD), essential for nucleoid maintanence; Cpsi_3231; phage(gi16129761)     1.62e-05            ChlamydophilapsittaciRD1MHFHRYVIIDTSGYQPFLAYVDHQKVLKQWDLPVGPDQGLVLEFIFKNSSLSFQGIGVAAGPGNFSATRVGLSFAQGLALSRKVPMIGYSSLEGYLTPKDKGKALMLPLGKKGGVLTLSSDLSEDGFIHDKNGVGPGILLPYEEASKYCLANNCYHVVSPNPQLFIDSFSNRIRIEKAVPSIDHIRRNVVSQLMLLECSQQLTPDYRSCSCFF
370830..371006                     30s ribosomal protein s21; Cpsi_3241                                                 N/A                 ChlamydophilapsittaciRD1MPSVKVRVGEPVDRALRILKKKVDKEGILKAAKAHRFYDKPSVKKRAKSKAAAKYRSR
371036..372211                     PHAGE_Agroba_Atu_ph07_NC_042013: putative virion structural protein; Cpsi_3251; phage(gi100293)     3.70e-15            ChlamydophilapsittaciRD1MDYYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGDPAGARQGASKKVHITLTFEEAARGVNKELLVSGYKTCETCSGSGAASKQGIKCCDRCKGSGQIVQSRGFFSMASTCPECGGEGRIITDPCSNCRGQGRIKDKRSVHVQIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEAHPVFERRGDDLILELPIGFVDAALGMKKEVPTLLKESACRLTVPEGIQSGTILKIKNQGFPNVHGRGRGDLLVRVSVETPQNLSEEQKELLRKFAATEKAENFPKKRSFLDKIKGFFSDFTV
372246..374282                     PHAGE_Synech_S_SM2_NC_015279: transketolase central region-containing protein; Cpsi_3261; phage(gi326781943)     3.33e-10            ChlamydophilapsittaciRD1MVAIQHELGSSIKEVLKLVWGLRFAENKMLLLSRQSDSGGTFQLSCAGHELVGVVAGKSLIPGKDWSFPYYRDQGFPVGLGCDLSEIFASFLARLAPNHSSGRMMPYHYSHKKLRICCQSSVVGSQFLQAAGRAWAVKHTKSNEVVYVSGGDGSTSQGEFHEMLNYVALHKLPVVTVIQNNAWAISVPFKDQCSTDLVRLGESYQGLSVYEVDGGDYFELVDTFSKAVDQARHASVPALILVNVMRLEPHSNSDNHEKYRSREDLDHCKSNDPLVRLERLMIDECGISPAEILDIKAEAEFEVTRACEIAEGMPFPSKGSTSHDVFSPHTTSLIDYENSLEAQRLRDTQPKVMRDAITEALIEEMSRDSGVVVFGEDVAGDKGGVFGVTRGLTDRFGIERCFNTPLAEATIIGTAIGMAMDGIHKPVAEIQFADYIWPGINQLFSEASSIYYRSAGEWEVPLVIRAPCGGYIQGGPYHSQSIEAFLAHCPGIKVAYPSNAADAKALLKAAIRDPNPVVFLEHKALYQRRIFSACPVFSSDYVLPFGKAAITQVGSDLTIVSWGMSLVMSMEVAKELAALGISVEVIDLRTIVPCDFSTVIESVKKTSKLLIAHEASEFCGFGGELAATVAEQAYAYLDAPIRRVAGLHAPVPYSKILENEVLPQKEKIFQAAKSLAEF
386477..386490                     attR                                                                                 N/A                 TAAGGTAGACTTTC
