gi|315125111|ref|NC_014803.1|  Pseudoalteromonas sp. SM9913 chromosome chromosome I, complete 3332787, gc%: 40.38%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
1263565..1264089                   PHAGE_Bacill_G_NC_023719: gp349; PSM_A1181; phage(gi593777805)                       1.86e-10            PseudoalteromonasspSM9913MAIILGIDPGSRLTGYGVVAHQGAKFTYLGSGCIKLADHDFPTRLKMIYQGITQLIEQFSPETFAIEKVFMAHNPDSALKLGQARGAAIVGASMADLPVFEYSARQIKQAVVGNGGADKSQVQHMVKNILKLPGTPQADAADALAIAICHAHSEQNLIKLAGSASKTVRGRLRK
1264092..1264709                   Holliday junction DNA helicase motor protein; PSM_A1182                              N/A                 PseudoalteromonasspSM9913MIGRLNGVLVEKQPPEILLEVSGVGYEVQMPMTCFYDLPKVGDNAIVYTHFVVREDAQLLFGFNNKTERALFRELLKANGVGPKLGLAILSGMSAQQFVSCVNNEDATALVKLPGVGKKTAERLVLEMKDRLKNWGNDLFTPFSDSAVIEPASDATIANNAADDAVSALVALGYKLPQAQKAVKSVSKPDMSTEVLIKESLKSML
1264717..1265724                   PHAGE_Dinoro_vB_DshS_R5C_NC_041921: hypothetical protein; PSM_A1183; phage(gi100099)     8.34e-07            PseudoalteromonasspSM9913MIEADRLIDAAEKTNEDTIDRAIRPKLLADYRGQPHVKQQMEIFIEAARSRSEALDHLLIFGPPGLGKTTLANIVANELNVNIKTTSGPVLEKAGDLAALLTNLEEGDVLFIDEIHRLSPQVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPAFTLIGATTRAGSLTSPLRDRFGIVQRLEFYSVEDLSHIVGRSAHYLSLEMCDDGAAEIAKRSRGTPRIANRLLRRVRDYTQVKSDGTVNAEVAQQALDMIDVDKSGFDYMDRKYLLAIIEKFMGGPVGLDNLAAAIGEEKETIEDVIEPFLIQQGFIQRTPRGRIVSDNAYHHFGLLPKKD
1266689..1267303                   inner membrane protein required for outer membrane integrity, uptake of group A colicins and phage DNA; PSM_A1184     N/A                 PseudoalteromonasspSM9913MSWAIIFQRKKAISDALANAKKFEQRFWSGVDLSKLYNEISSRGGQSTGIEALFTSGFKEFARHKKNTFQSAGIVMEGTHRSMRVALSREIEKLESSLSFLATVGSISPYIGLFGTVWGIMNAFIALGEVKQATLQMVAPGIAEALIATAMGLFAAIPAVIAYNRFANKVEKLESHYINFMEEFANILHRQAATQIEAQANVPA
1267353..1267721                   tol protein, role in outer membrane integrity, uptake of group A colicins (TonB-independent), and phage DNA; PSM_A1185     N/A                 PseudoalteromonasspSM9913MLVLLIIFMATAPLITHGVKVDLPKMEESDLVDTKDTPPIIASIDSQGKYYVSIGTDPEEPMEALDVAAVIKLQLMKNPDTPVMIKGSGKVSYQEVLLLMDFLKNAGVPSVGLMTESFEGTK
1267726..1268631                   PHAGE_Coryne_Darwin_NC_042086: replication and recombination DNA helicase; PSM_A1186; phage(gi100033)     3.16e-06            PseudoalteromonasspSM9913MNTSLIKSVILHLALGGFLYASANIHPPKPKVMEVTLNAAIPEPENAVSAVTVDQQQVEQKIAELRKKEEDKRRAEDKRIRDLERRAADARKQSESEARRIKKLEQQRKAKEKERAEAEAQAKKAREIEQRERAKAKQAQKQKQEAEDAAKAAADKRKAEEAALKKAEEERKKRAEEAERKRQQALQEQILQEQLAKEQAARNKIRQQQVVSEVDKYRALIMARIQQNLLIDEKMKNQQCRINLRLGFNGLVTQVKSLGGDKLVCEAALRAVRMADTLPVSKDKDVFEQLKNINITIAPEF
1268640..1269998                   required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA; PSM_A1187     N/A                 PseudoalteromonasspSM9913MFNKIKIACLVLILGFQGVAHAALEIVITEGIDGARPIAIVPFKYQGIGPIPEQLSDVIAADLMRSGKFKPVSVSQMPQQPHKDGDIDYGAWVNKGVEAVLVGEVEQQTNGRYLVRYELVDVIRGQITGGETQMMSNGKLVQSQDHILEARQSVIGETGFRRYSHRISDVIYEKLTGEKGAFLTKIAYVIVRDTEEKPYQLVVADYDGFNEQVLLRSKEPLMSPVWSPDGTKLAYVTFENRQSQIYIQDIYTGKRELITSYKGINGAPQFSPDGKKLLLVLSKDKTGATEVYLLDLLTRKETRLTRHRSIDTEPSWYPNGEDIVFTSERGGNAQIYKLNLKTGRTQRLTFDGDMNLAGSISPDGKELVMVNRTNGQYHLAKKELATGAFQVLTRTRLDESPSIAPNGSMIIYSTLHNNKQVLALVSMDGRFKARLPVLDGQVKAPAWSPYLQ
1270034..1270573                   required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA; PSM_A1188     N/A                 PseudoalteromonasspSM9913MQLNKILKGLLIAVPVMTLAACSSSSDIDENAANQSNQATVEQTTTDTVEVATMTPEQQAEEQLRQKYEALRQEQIIYFDFDKATVESKYADLLRAHAEFLVKNPSVKVLIEGHADERGTPEYNIALGEHRGQAVEKYLQSLGVSASQMSVVSYGEEKPMVKTRTEAAFAKNRRAVLVY
1270587..1271339                   prenylyltransferase domain-containing protein; PSM_A1189                             N/A                 PseudoalteromonasspSM9913MKPKIILAAMILSGSTQLMAAPAPVSEAASSQSSIEKRLATLESMMQQRNFLQVELQQQLNLLQDEVSQIRGVTEEQSYKLEKVLQRQRELYQEIENRVSQAYAKPTAPAPTTDYTQPSNEQSYSSDLSENEAYERAVALIMKDKRYDQAIPEFQAFLTTYPNSVYTSNAHYWLGQLLTIKNDGVKAAEHFKVVVNEFPNSNKRPDAMLKLGTLLQEQGLKAEAQKILNELINQYPSTTAAKLATERLSK
1271511..1271586                   tRNA                                                                                 N/A                 GGGTCATTAGCTCAGTTGGTAGAGCAGTGGACTTTTAATCCATTGGTCGATGGTTCAAGTCCATCATGACCCACCA
1271651..1271726                   tRNA                                                                                 N/A                 GGGTCATTAGCTCAGTTGGTAGAGCAGTGGACTTTTAATCCATTGGTCGATGGTTCAAGTCCATCATGACCCACCA
1271877..1272917                   quinolinate synthetase; PSM_A1191                                                    N/A                 PseudoalteromonasspSM9913MSLAQTIMPEGYIFPPKPAPLTQDEKGEYKARIKQLLQEKNAVLVAHYYTDPEIQALAEETGGCVADSLEMARFGARHEADMIIVAGVRFMGETAKILTPNKTVVMPTLEATCSLDIGCPVDEFSAFCDQHPDRKVVVYANTSTAVKARADWIVTSSCALEIVEHLDEQGEKIIWGPDKHLGSYIQKNTGADMIMWNGACIVHDEFKTKALKDMKALHPDAGVLVHPESPAEIVELADAVGSTSQLIKAAQTMPNKKFIVATDRGIFYKMQQLCPEKEFFEAPTAGSGATCKTCAHCPWMAMNGLQAIEEALIDASGKEVFVDMDLREGALKSLNRMLDFTANMAK
1273088..1273177                   tRNA                                                                                 N/A                 GGAGAGATGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGTTAATCCCTAACGAGGGTTCGAATCCCTCTCTCTCCACCA
complement(1273230..1274837)       PHAGE_Bacill_G_NC_023719: gp350; PSM_A1192; phage(gi593777806)                       3.65e-10            PseudoalteromonasspSM9913MLLQTIGFSASAVTLNENDSLQLKSAIWHQVDLAKPTQGEQLVNAYDNVNTPITSLYSANGSAIAKISLTTTSAGRWYIIPQVNYLDSGVAFYQDASGIRKVADFSQDSAIPSAIVMHSRAFELQLEANSHGVLWLYVNAKHFAKPVSINVIPQSRFVKLQFYINSLSLVSITIMLTLACMALIMFFKTRHRVALFCAGYIGLHGIGWAFAAGIAALLFNYHAINTHYFGMYIFAFAIASASSFAYYLFNFDQHTRSGISRFLKYFSITALACGFLNLFLSFHWVFYLAHFLAAIWVYLSLKLGFTMLGMKDFRAKYFLTGNLVYSLSLVIFILSHLNLIEISSPELWVLIALAIDCICILLSLSEWLKIKQNNYIKALELSRIDPLTKVGNRLQLQQVLDNLDNFYLIVFIDCDNIKSVNDHLGHAHGDKLLIEVTRLIKSALADKGEVCRTGGDEFICVCNVKSAQQLGQLTLSINESLNYIHQQVQKNWPLSGLSYGIASSEECNDYKACLTLADQRMYTLKHQRKNKRQHV

#### region 2 ####
3113957..3113971                   attL                                                                                 N/A                 TTTTCCTGACCGTCC
3114832..3115641                   PHAGE_Shigel_SfII_NC_021857: hypothetical protein; PSM_A2923; phage(gi526244689)     2.12e-80            PseudoalteromonasspSM9913MHRSSYKYWAIRDTTPTPEQVRLEAEVKAIHAMSGGSAGARTIAAIATNNGFELSRYRAAKLMVKLKLESCQVPQHSYKRGGNEHLEIPNLLDRQFDVVEPDTVWCGDVTYIWVGNRWAYLAVVIDLFARKVVGWAMSLSPDTNLTLKALELAYESRGKPTGLMFHSDQGSHYTSLKYRQRLWRYKIKQSMSRRGNCWDNAPMERFFRSFKTEWMPKVGYENFRDAKYSVSDYINGYYNNVRPHHYNAGLAPNESEIRYQDSKTVAKIS
complement(3115634..3115768)       hypothetical protein; PSM_A2924                                                      N/A                 PseudoalteromonasspSM9913MKPELNHNATGVKRPFKLEEIWRIRTRIEIQNNLMQLALLVVVN
complement(3115997..3117196)       hypothetical protein; PSM_A2925                                                      N/A                 PseudoalteromonasspSM9913MSTQILDAYAAVFAALDEKELQDGEFKGWLRLTPQLKDKLELLADAGLTTGSYDFNKDGKPFSSANLSQLKPAHFENNIRFYIELTAQQIKSDYSICSEWNELLANELRVKSPVKYIFFTNTSTLLTPDSGDEKYVNYLNVHKAYEFVKELAESTEGGDSTIFYERPLNFEFVLKESDLTHSIDLDALKKLLSKDLHKEAITCLMCRELVSFLKDNTLRQRFSYLIQHMDSLVSNVLLSYQSYVENYTFDKVRKEYLEKRTEYVSKIHGVFDNIATKLLSLPAGIWFATTQIKEIEIGGLETMAFAKNVSVIVTVSVLAVLLIFNLFGQFSTISTMSKEYRGVFNALAKTYEDEAPEIGKAKSDIESAQTQVEIKLYIAICATLSLVGLTIWMFCKAYN
complement(3117196..3118236)       PHAGE_Pseudo_H66_NC_042342: hypothetical protein; PSM_A2926; phage(gi100015)         4.84e-34            PseudoalteromonasspSM9913MAIKHVIIHVVKRDKDGERLSKQLRNNENSTQGMTAQLTDGLLELFSNAHLNIGEFGVDGDNEVEPAFEQKLKKYYDDECKCSDFIAMTKELANKYESVIVGDQLHSVKGGYLVFYQYERNDDDWLAVAILNKTEGIDVAANLEVVASEILDLKRLHLGAAINLTQWKSELSTRYVRFRTGLAADVRDYFEKFIGCQRDKLAATVETKKLKSAIQDYAKNACGMDDDVVSQKVAQAHDYIKEQQKLGNQVQLSHVSNHVFPDRADEFARQAKEIHDLPEELAIDAKVLKSYKKLSGRGKGIAISFDRGMLNTTVKYDDGELTFSEIPDSLRAAIEEELEDDLGQDN
complement(3118474..3119037)       hypothetical protein; PSM_A2927                                                      N/A                 PseudoalteromonasspSM9913MEKLLIGIAGVFVGALLTILREFFNEWRSKRNDARYLAVRVSCQLDHFISGCFEVVCDNGVEDQQGCLVTNSKTPTIDLDGIDGKWQSMRFDLMYRILDLPNRLNYAKEVISIAAEYGDGAPDYRDAFRARQYQYALLGIEANEIAETLRSKYSMPKKCYETWNPLERFIEKKAEIDAIENNRKCSS
complement(3119063..3119896)       PHAGE_Clostr_c_st_NC_007581: hypothetical protein; PSM_A2928; phage(gi80159829)      4.69e-06            PseudoalteromonasspSM9913MIQLSELRPSGKQRVYDILTALEFDMADWSESLTNKERSPSSNPKYCYNWSFVRDDKKVIVLFLWYEEMRIINGRIYQEHSFKKYAEEQEKGRKKRSLEIDYAIGLAYEKKLSIDVVICQGNENTKGVLKRELDQEKWFVTGYDDKTGACIIERGNSYQPSKLADQFDANNIKNPKYEYEKYGVEYARSSVIRRKVLLRSNGKCEYCLSDGFITNSGDKYLETHHILPLSQGGDDSFINVIALCPKDHRKAHFEKDSFLTQESLSNIVKAKLTVGNC
3120479..3122347                   hypothetical protein; PSM_A2929                                                      N/A                 PseudoalteromonasspSM9913MKIIKEYIQSDGKKLRLSEEAVTHVYEGNFVVRTQQGDDNMTVLRGGLHSCSGWNTFRNNYNKELSHLHFFNSNIHKYWYYARELSNGVITLRLPRDLFSGKAAKITMYPDDYYKSGYLWKTLFPKHFDRNAVIEAIDEALENEDITQRSNGQIIGYINNDEPMKTMKIVIQFKGTEIKSAFPAWTQPNSGNVGKPFSHYDNIGFIISQSTEYFEDNYDLQNEMKISVFGEKISPDYLPDYTPMIFKRRTKINEKIKAGEWIKSRRKELSSMRLDDKDNDRLYEYINDHTILKYYPEITSGAYSTALDLIFGDESFHNSFQIVQNIVDGMYYLLCSNQKERLIKTICNVLDNMVTHTNFDQLLKKKIMSTVILIVTYLNDSELSYKFILTLSTSPIRREAYLEYNLNSINKKKLQVPTETYPVELDFIDNPNLDFQLEYKDFIEFLKELYSETYTLNFDEEMLNNLLNDVIDNQEKNYKFLISDALKYFSKEDFLSLSYHFDKILNSAQKYELGDSSKLIESCGLILRDYCRIQFAHRQRINARYLKYNDYVSVISIDYIDHNLLYGKILKHERISNHLNLTRFTDGMLKFALKTEDKNFETDIHNFKARIGKEKPPLPEIM
3122571..3122585                   attR                                                                                 N/A                 TTTTCCTGACCGTCC
complement(3122702..3123172)       transcription elongation factor GreB; PSM_A2930                                      N/A                 PseudoalteromonasspSM9913MYTDLITREGLDKLNKELNYLWRDYRPEITKKVAWAASLGDRSDNADYKENKRLLRQIDSRIRFLRKRIEAVKVIDYSPQQAGKVFFGAWVEIENDDGETKAFRIVGPDEIYGRNDYISIDSPMARAMLKKEVDDEFQVKTPVGVKEWFINKIEYK
complement(3123194..3123817)       hypothetical protein; PSM_A2931                                                      N/A                 PseudoalteromonasspSM9913MTELSPKTVHEQLKKQTSSRVQSSLDAIFQVCTEQKERGLNEFGYSIIARLGKGRGVPAAQSIRNKTGEPYRTLIASFANSSLQPDKSTISLNKGKSFTWIEKLKDPVVRLQANILYSQKLAAEKLVKEIVPIDQVIEFYDGGSSSSPNLKLTDLEREALEYLISKEFMRRAGLEVGPNGSILSSNDKDNFLPVATLDAVKKALQYL
complement(3123819..3125168)       phage integrase family protein; PSM_A2932                                            N/A                 PseudoalteromonasspSM9913MFGSRLASRLAAALFFASKDQLTSATYAGKSFKECHLQLEQQEGIALSLFKSEYTPHSMRVSLINAYVYEFGMPLEVIMKLVGHSSVVMSIYYLKSDKTGANIREKLKLGEKQALSNGSDTLKSFIESQRIEECKKQLLGNNPEFLQTLNNSRPASSYLFKDFGICPVGGAFCREGGDAVATKANIYHPVNAGYLGEQNCIQCRFFVTGPAFMMGLSALFNEVSLAVNTQSYRFTSLEEELNNAASRVDVISHELYKQKNQQLEDEKQQLQALRRKLNSEIETRAKKLDLYMADMNSLHKHLTNCQKVINNDKQQGDSKLQLIVPNEFEISFELDDVSSFQQLSEVCENAELYHSCSDELAVTRRSQALDRMLLNNGMNPQFIFLTEKQQLAVGNQMTQLMLSRLQSWEKLDKLINGTLALNDFLEKERLTLMDIKSLFASSTPLKQVD
3125241..3126443                   PROPHAGE_Shewan_MR-1: ISSod4, transposase; PSM_A2933; phage(gi24373869)              0.0                 PseudoalteromonasspSM9913MTQSFDFNKALAELQAGKGLTGEDGVLTPLIKQLTEAALKAELEQHLESETEVNRKNGSTKKTVKSSIGQFELETPRDRSGSFEPQFVKKNQTKLTPEIDEKILSMFALGMSYRDIRGHIQDMYGVEVSEATITAVTDQLIPELKAWQARSLDTLYPFIWLDAIHYKIKENGRYVSKAIYTVLGVNIEGRKELLGLYISESEGANYWLSVLTDLHNRGVSDILIACVDGLKGFPEAIATIYPDAEVQECVIHQIRNSMKYVASKHQKEFMADLKPVYKAATKDAAEAALAELDAKWGKLYPIVIESWRRKWGNLSVYFKYPDYVRKAIYTTNAIEAVHRQFRRLTKTKGAFPNENSLMKLLYAGILNASKKWTMPIHNWNLTLSQLAIHFEGRLDGVLDI
complement(3126440..3127396)       phage integrase family protein; PSM_A2934                                            N/A                 PseudoalteromonasspSM9913MNSGRFISPLEFLIREKTNIQPMLDLFEEESVLRKKKWLFSVNEFLNWTIVNFLTVEDPETGEISRIKGARNPFARINFDDEIAPVLLNETNKLALPYQFVKSAREWIFPPNEIQNKTNYSDLKHLHRTSADWIQINDLSLIDTTDPDCIIRQEGDKTFLWLPIYWTYTYALMQLPARGRQIVYCDSGEADAEVPDIKNGSIIWKPNRNKLTGLTKQQGMINKTKDNDFGVHYTSNKTHFSGEGYTIAFMPIELAYWLIKLRKWQEKYNPISKPTKWFDCRRTNLNEVQRKQKGINCFLFRGYQNEGGRSEFCVSLSC
complement(3127417..3128313)       PROPHAGE_Xantho_306: transposase; PSM_A2935; phage(gi21243165)                       2.50e-131           PseudoalteromonasspSM9913MDFIDACREHYGVESICKELPIAPSTYYSHKQIQREPERLSNRKKRDAELIILIREVWEDNMSVYGARKIWKQLQLDDHQVARCTVERLMRVMGIQGVRRGKAHKTTIPDEQQDKPLDLVNRQFTAEQPNQLWVADITYVATWSGFVYVAFVIDVFSRYIVGWRVSTTMHTELILDALEQAIWHRGNPEGLIHHSDRGSQYLSIRYTERLAEAGIQASIGSVGDSYDNALAETINGLFKTEIIRRNGPWKNVDAVEYATLEWVNWFNNQRLLSSIGYISPAQYETDYYDNLNESGKVA
complement(3128649..3131237)       phage integrase family protein; PSM_A2936                                            N/A                 PseudoalteromonasspSM9913MKKYFYPEYALAKKHAQLLGVKTSKEYKLRYKEDPLLFNTPNKIYKNEWEGWESFLGTKKEFYATLSDAKKAIQALGVTTRREYKRQYKSDPLLISAPNIYYEDDWKGWRDFFDTNQNFYSSIDLAEKAVSVLGITTSTQYMAQYKQDPQLPSVPGITYSSEWKGWKSFLGKEKEVYTSYSLAQKAVIDLGIKTQKAYISCRRNDPLLPFSPDKVFFKEWEGWQHFLNTFDESYFDLSSAKKAVISLGIQSSSEYVKRYKEDPRLPAKPTRKYKDEWPGWFSFLGKDIKFYESYELAQKAALKLGITSVTEYRENYHNDPMLPSMPNKKYAKSWRGWPHFLNKTYKFYTSYADAKSATQALGIKSSVEYKKRFKEDFQLPSQPDNVYEEDWINWGDFLGKKLIQFYLTYEEAKVAVKKLGATTLVQYKQKRLDDPKLPSCPDQVYLKDWLGWKIFLNTPKKEKYLTLIEAMQATQAMNITSLKEYKSKYHLDPNLPAKPDGKYCKEWINWHTFLGKSPKFHSYDEAQQSAIKLGIKTAAEYRENYKKDLKLPSVPRQIYTHRWESWQDFLKVASKFYPTYTEAHNAAKALKVSSLLEYKARYKEDPRLAVKPFALYADDWINWIEFLGLKKKSFKSYEDAKKIIQTLNIISFADYKNCPLADLYLPKNPDSYYSASWTNWKDFVLPEIVDNLEILKKACKILNISNSKQYREVQKKYKQLPSKPDKKFEDWVDWYDLLNIPRPYSYEELRLIVLKYKCKTLKDYKDMRTKLHDPRIPSSPEETYKTCGWTNAYNFLGTNRPYQIKYFDPKWKFWADFIVEFLKSAKAGDTKVKDLCEFVREYIEPNNYEVLNRPVFARDSIT
complement(3131234..3132625)       phage integrase family protein; PSM_A2937                                            N/A                 PseudoalteromonasspSM9913MLNQYKYSKPSYLSVTNYILNSTTYWISILAYILKRRVDYKANQSVLAVSLPVLITDKGILVSHLRFLYTKRNKSQSWLERNVFAVEQLLKFMNAHSSTFTSATELLRSFVDVLCFGSIDDSQNDPSNLYWSPRKVEDVNVLLSHINCYCDYLDEIYGYDLPNLNPLRKATRAEERMRWCAYYKRESNCFLNHLSNPSKNRFEMIRSIQGPMNHLLSIESVNRFPEEHFQRFLKYGFLNHRTREVDFGCVLIVMLMHYGGLRLSECFHIYIRDITIDVKNSTAIFSVFHPSDGASPELGFSNRREYLNTRFRQKPRNEYQRSHRLYSGWKQPLLTNKNLSFDVMIFPNNKAKELAWLLEQYLAVRITGNHPYLFTNSNGDPESKKNFIQKYKRGVERIGLDAGKCFGTSPHSHRHSYGYSLNQAGFNQLEIQKAMHHKSNFSCLVYLKPNDTDIRNIMRKNDI
