gi|334139601|ref|NC_015580.1|  Novosphingobium sp. PP1Y, complete genome. [asmbl_id: NC_015580].3911486, gc%: 63.71%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
complement(347367..348647)         PHAGE_Pseudo_vB_PaeS_PMG1: integrase; PP1Y_AT3358; phage(gi374531680)                2e-08               MPTAKLNKRNVDAFAPPKDKQAVLWDSEIRGFGLRALPSGLKTFIVQYRNIEGIKRRINLGRYGVITTEQARDLAKIKLGEVAGGQDPAEAIHQARSGMTVAEICDWYLVEARAGNILGRKNRPIKASSLAMDESRINTHIKPILGHRMAKRLTIADVEQMQADVRDGKTAKARGNGRGGRPAGGPGVASRCLGSLQAILGHAKHKGLIAEHPTRGAKKLAINKKTRRLSTAELVAFGKAIAYAERNGENPTALAVVRTLALTGYRREEAQSMKRAWVHAEGGFVSFPDTKTDAQIRSIGPEALKVVLAQPEIVGNPYVFPSVTGAGAYQAAPACFRRVCQWAGIEGATLHTLRHTFGSIAGELGFTELTIRAMLGHASQNVTQDYIHIDEALKLAVRKTSDEIARLLAEGAEALRPVRSHAAVEN
complement(348777..349100)         hypothetical protein; PP1Y_AT3375                                                    N/A                 MQQSPTRLRHVTAAEALTPESDASKHLQNRGNLSRSSTTGDARARLNSGAVVDPVSKETAVSSPLIDQISNFHRGTGAGEGIRTLDPNLGKIFRPLFLNFPKYDYLR
349987..350006                     attL                                                                                 N/A                 AAGTGGATGCCCCGCGAGGA
complement(350092..350301)         PHAGE_Entero_P4: transcriptional regulator; PP1Y_AT3390; phage(gi9627517)            3e-06               MSEAAPARSNRFLKITDVVAETSLSRATIYRLIAKGDFPSPIRVSPQRVAWSERSVQGWKDQQANNLLN
350415..350798                     hypothetical protein; PP1Y_AT3396                                                    N/A                 MVIGANVAASGEFRSRPLYLDGRLTDIFQFLLPAARTDFPLGFGAVADVGDDVLVGGRADQLVYEQGLGAEDEAFFVQLAGPVRSQFEHHGAHWRSPLAFDRASATMNGIARTAAIRNRARVIALIA
complement(350890..351153)         PHAGE_Azospi_Cd: hypothetical protein APCd_gp10; PP1Y_AT3403; phage(gi168495113)     2e-19               MTIPVEIQESRRPVDDRLRLLVERVERLEEEKKGISEDIRDVYNEAKAVGYDVKMMRQIVRLRKMKPDDRREMDMILDTYRAALGID
351703..352029                     hypothetical protein; PP1Y_AT3411                                                    N/A                 MDQVAIRLSAVHRSGVGFGGRPIVIGGAVIRCGVPLALGQDGDGPGEATWPGGADRFHADHELMPAGIGVAAMIVDLPVKRRVLAHGAGEGLATAGRAGDVWKLRRAT
complement(352032..352565)         hypothetical protein; PP1Y_AT3418                                                    N/A                 MRSAGWIATKGTGSMTKIRDPLTFSLAIKIVAEGIGWNLVADATHRAERTVRLWSESDKNGTPTLDQAIALDRAFLAAGGGYAPILESYVRQLDVSLLELIACRAALADDVANVSREIGEAISFCIMAAQPGASPAVIQRAIVETEEADALLPRLLGRLKSFMPGNGAARETMGNHR
352686..352862                     hypothetical protein; PP1Y_AT3425                                                    N/A                 MGCLWAGMRPPRFQENTVEEGSPIARAIDLIPPKVSKMLFDETMSILCDILGQKAISK
352900..353442                     hypothetical protein; PP1Y_AT3428                                                    N/A                 MEKVANRLRDLRQKAVPRLTVRAMAAALDMPLGTYSNYESTRYKKPSLPLDLTRMIASVLANHGVDPAEVMKLAGLSEDEAEPEAREIEAHKPRQLCVTLPVILPSEAALRDMFRSLLVMVPDGATKDEVAEILARRLPSGLAAIGPVLLDPVAAVSIAGEADPQVPAKAHPEAEQRSRT
complement(353898..354326)         hypothetical protein; PP1Y_AT3443                                                    N/A                 MAISRTTPMKRHTLTTMTAGIILCLSGCAATQTSEMNTGERISQRGGQISHYGESWSAGQKDAKLGQRMVDKSNRSSDSARKQLADARADVLKAEARIQAASDAKIEGEQLILDGTMKMNQAEADYARVRAGPSAKSGNPKF
complement(354533..354991)         30S ribosomal protein S12; PP1Y_AT3452                                               N/A                 MDNGQTCIAKERCLAMDLNFLLHIHQIHVIKANATSDEKSRQIHLDKAALHAEEIGSLRVPPLQAVTLLSSVSADTLSYGTYAWDRPVKPTFSLDSWENEGGAVRQPDVPDALETKLTLTPQYFVGSAVFSDLAQAVAEHARQKSDKLQGDN
complement(356275..356433)         hypothetical protein; PP1Y_AT3466                                                    N/A                 MEISLIEAAWRKLEQGVSSMVQSCWPDNLTPGTSLFALFLVDFCNSTDICVK
complement(356438..357460)         PHAGE_Burkho_KS14: gp10; PP1Y_AT3470; phage(gi327198279)                             6e-77               MTQAITNIPDWRVTLDGKDLTERMRPRLVSLTISEKRGDEADQLDIVLDDTDGGLAIPKEGALLTVALGWKQGRDVTPGLIDKGSYKVDDVTHSGPPDQIRIRARAADFTSQIRNRREQSWKNTTLGAVLQDIAGRNGLTLKVAADMAATALSSISQSRESDVAFLRRLGREYDAVATIKDRHLIFARKGAGTTASGKALPTLTLTRRSGDGHNWQRQKRDGQEGVTASWHDRKDAKRKTITVGKADGAKKLRKVYPDEASAKRAAIAERDRLKRAPATLDLKLALGRPDAYPECRVTASGFKDEIDATTWLISEVTHRLDNGGGYASDLKLETAPRFSA
complement(357457..357861)         PHAGE_Burkho_KS14: gp11; PP1Y_AT3480; phage(gi327198280)                             8e-28               MALGMFLFQIPTLAYDDLQRKTDWRFARSARVGARDAVQFIGPGDEKVSMSGAVYAEIADGRVSIDQLREMADAGEALPLVDGSGTVFGNFVIEAIDERHVAMMADGRPLRIDFGIDLLRVDDPAPTNNAETAA
complement(357884..360397)         PHAGE_Burkho_KS14: gp12; PP1Y_AT3486; phage(gi327198281)                             1e-78               MADRNLRLQIILEGLDRVTAPLKSITGASSAARRDLAETHKQLKGLDALQQQVGRYKATETRYANDARQYKELQAKLAALGQQLEETEEPTKKLRNEFEKVERQTAQVARKLESGGAELQQLSSKLSDAGIDVADLARHEDRLAERTQDATEALRRQTAQLEKVDRARRNSEKLSDIGSRATGMGVGMIAAGTAAGAPIAMATKQAMTLESAMADVRKVVDFPTPRAFARMSDDILEMSTRIPMSAEGIAQIVAAAGRANVPRQELLRFAEDAAKMGVAFDSTAEEAGSTMAKWRTAFELPQQGVVALADQINALTNSYGGNVGAVTDMVTRIGPLGKVGGLAASQIAAMSQVLSSVGVESEVGATGIKNMMLALTKGEAATRSQSKAFQALGLDAVQVAKDMQRDAGGTIIDVMKRLQQLPKEAQAGALTQLFGSESVSAIAPMLTSLDQLQKNFALVGDKSQYAGSMNREYLNAVATTAGSTQLAGNAIDALSTKMGDQMLPTVSEVSEKVKETANGMRDWAEENPNLAKGIMIFMAVGSGLLILLGGLALAFAALTFAAAPLGIALGPLLLIVAAVAAVAAAAYLIYSNWGAISAWFSDLWATIKSAAGTAIDWLVDAFMNFSPIGLLMKAFDAVLTYLQGLDLKEIGRNLIQGLVNGITGMLGTLKTTVMNAAGSVARWFKEKLGIHSPSRVFAGLGGFVMAGLDQGLADNSAGPLRRISALSDAMAAGITANPIAPLVRSAQPEGGGILSRIADSSGRMAGALVAGAAAPAVAMASPATAPADTRAAPSVPGATYNITVHAGAAPAQDIAEEVRKAIEQIERERRGRGFGDE
complement(360537..360842)         PHAGE_Burkho_KS14: gp13; PP1Y_AT3509; phage(gi327198282)                             4e-19               MTEAIAEIRTVALDAPIQRGEQTIESIQIRKPKSGELRGLALVELGQLKVDALTKLLPRVTMPMLTPAEVSNMDPADLLACGAEIGSFLLQRAQRTDALDR
complement(360905..361417)         PHAGE_Burkho_KS14: gp15; PP1Y_AT3512; phage(gi327198284)                             2e-39               MGLPRTLKNLMLFNEGQSYVCDVKTVTLPTLTRKMEEYRGGGMSAPVKLDMGMEAMELKSVFAGPERDMLRQWGLTKVNGVYMRFAGFYQQDDTAETDTIEVIVRGRHSEIEMGDQEVGTPADFTVTSALAYYKLIWNGRTEIEIDPLNMVEIVDGSDRLAEQRSALGLF
complement(361461..362633)         PHAGE_Burkho_KS14: gp16; PP1Y_AT3515; phage(gi327198285)                             5e-121              MAFKHGITVTEISTGARTLAAVSTAIIGLVATASDADAAVFPLDMPVLVTDVEAAIGDAGTDGTLAASLRAIADQSRPIVVVVRVAEGADEAETASNVIGTTTAEGMKTGMQALLAAQGQLGVKPKILGTPGLEAQAVTAALAVVAKKLRGFAYARAVGDTVADAVLYRANFSERELMLLMPDFLAWDTATSANVTSFAAARAMGLRARIDELYGPQKTLSNVAVSGVVGLTKDIHWDIEDMASDAGVLNASEVTALVRSDSGFRFWGNRTCSDDPLFQFESTTRVAQLLADTVARGMDWAMDKPLTPALARDIIETVNGFFLELKAAGVILGANAWFDEANNSTASLQAGKLRIDYDYTVPPPLEDLGFNQRITDSYFADFASQLTQAA
complement(362650..363000)         PHAGE_Pseudo_phiCTX: predicted baseplate; PP1Y_AT3525; phage(gi17313236)             4e-23               MTGMARDTGKALDGLDHIRQSAADILSTPMGTRVGRREYGSLLPELIDQPMTAANILRVYAATAVALTRWENRIRLRRVGVAAGDRPGAATVIIDATRTDTAPANALVRLSVPLAA
complement(363000..363536)         PHAGE_Pseudo_phiCTX: predicted baseplate; PP1Y_AT3530; phage(gi17313235)             2e-38               MAQPLDPEQLTGDVLRLGVIASVDHAQATCTVESGDVVTGDLPWIAPRAGGLRVWSPPTVGEQCLLLSPEGDIENGVVIVGLYCDAFPAPSANPDLVHLEFDDGAVIAYDLAGHALTVTLPAGGTATVDAPGGLTLNCDVTVNGTLSASTDVVGAGISLKGHKHGGVQAGGAQTGAPV
complement(363619..364824)         hypothetical protein; PP1Y_AT3534                                                    N/A                 MSISSLAALLKAAATASPKPSVRDLSLAAWADIDPKLVSSVSDALNETEELKELWGKWAQFSDFGSLVQLQQAAYSLINRARDGYDSEAIVSDLFEIAKTSEVSFASVRAVTNLVVEERVSLAEGVYLAPPKELPNSNAKYAAFESGMQGDGGAAISSGKSALVVEITCKPFRSPPNSSGPSSEFSPELTQELEQKFERARAALILVGNAAPEFGVSYGYVANVGWPGMRSPGFGAAFRVPRQPDRISLTHEPSLKSIFEQVRTTDPIISLAIDRLKASRKRDTDLEKAIDHGLCLEVLLMRGAKTETTEITNKISHRCAWLLGRNAERRHEILKIVKMAYNLRSKAAHAGALPAIRDSDQADTRKRHFEDCERLIVNLIVRLMKGWPDWDELTLGFETRA
364490..364828                     hypothetical protein; PP1Y_AT3542                                                    N/A                 MTARTEAKETSLVFAISKRSLTIASESYPSRARFMREYAACWSCTSDPKSENCAHFPQSSFNSSVSFSASLTEETNFGSMSAQAASDKSRTDGLGEAVAAALSSAAKLDIDI
complement(364929..365735)         PHAGE_Pseudo_B3: Dam modification methylase; PP1Y_AT3545; phage(gi56692617)          7e-49               MSTPFVLVRPVSPAAGYIGGKRNLSKRICAIIERTPHTSYAEPFVGMGGIFLRRSRRPRAEAINDISGDVVTLFRCLAEHYPYLIDMLRFRVASRAEFERLLAQAPDTLTDLQRAVRFLYVQRLAFGGKVSGRNFGVDASAPARFDVGKLEPMLADLHDRLQSVTIERLPYGDFIRRYDRDGALFYLDPPYWACERDYGADVFTRDDFAALADQLAGIKGKFLMSLNDNAGVRETFAAFTITSIDTTYSVGAKSRQAREVLVRNFSSA
complement(366183..366566)         PHAGE_Synech_S_CBS4: tail fiber protein; PP1Y_AT3558; phage(gi374531791)             6e-12               MARYFSSQSCGFYDSDLHLVVPADAVEITPERHAELLQAQAEGMVIKADEAGEPVAVIPAPPSEAEQWSALRKRRGYLLSASDWTQMPDSPLTYELRADWVAYRQALRDLPETVTDPAAVEWPVAPA
complement(366575..369103)         PHAGE_Burkho_KS5: gp23; PP1Y_AT3562; phage(gi327198021)                              8e-40               MGLTLTVTNAGRAALVDASNTGTAPVTIAEVGLTGTAVTPDPGATALPGEFKRIATLSGDVVADDTIHLIVRDETGDVFTVRSLALYLGDGTLFAIYGQADVLVEKSAQALMLLAIDVQFADVDATDLTFGDANFLNPPATTEQMGVVELSTLAEAIGGTSASRVPAEKMVKDAVNAWLDARFGANNAGIWHPGNDGAGSGLDADLLDGQQGSWYSNIPARLGYNPVQQGTGNGQLAGNVIKIGWSSASRLKATVDVTDQGNLVTDPYLAAGALTVNGAAMRRGGYDVWGPDNDGAGSGLDADLLDGQHGSAFARLNLPQSQAFSGNLLVGMGQASGFEGGQIDFAKAPSGAMTGDPSIDIYNNGFRMIGPFSGGTRTLEFDFGASGGKVWHAGNDGAGSGLDADLLDGQHGSYYADIPARLGYTPFNRAGDTVTGTLAVSGSGKILFSSVHTSEKHIEFERSGQTAYMYGSASGLGVYDTQYGEVWRWGYGSTFTIQGALAWTAGNDGAGSGLDADLLDGQQGAYYADIPARLGYTPVSKSGDSFTNVLSFTSGDSQGIASRPSDSTPLEVRGNGTGAAVMTFHRPGSFAAFLGLDTDNSLRFGGWSAGAVSHLLWHSGNDGSGSGLDADLLDGQQGSYYADIPARLGYTPVQQGGGIGQGTNKIYIGWSGARLKATVDSTDQGALVTEPNLNGNVLNIKGASMWRGAYNLWGPDNDGAGSGLDADLLDGQHASAFAKMADFAGDLSAGGYQKLPGGLVLQWVRGASGASEGSQALNWPLTFTAVIDAFVSTSVSYASSSADVWFQLVGSPSNNGCTVMRGYSGNTGEVAAAPVVFALGRI
complement(369116..369670)         PHAGE_Burkho_KS14: gp19; PP1Y_AT3591; phage(gi327198288)                             4e-44               MTYPTLLPPGSTALEKALEQVAAGLLEIPTPVRSVWSPDDCPIELLPWLAWGLSLDNWSTSWPEGIKRERVRQAISIARRKGTAESVRAVIASFGGSVAIREWWQSEPKGAPHTFDLVLNLDQAGAPASAAFVDQVIAEVSRAKPVRSTFTFTQGINTQAGVGLVAAVRPTIFARLSCTAPAAT
complement(369667..370560)         PROPHAGE_Xylell_Temecula1: phage-related baseplate assembly protein; PP1Y_AT3596; phage(gi28198989)     2e-75               MADATFTAVDLSRLPAPDIVEELDFETILADAVARMQAQMPEFITRDSDPATKLLQVFAYFAQLLRQRVNDAVRAVMPAYAVGADLDNIAALFGITRFTLASADEALGIPAVMESDADFRRRMVLAPEGYSVAGPEGAYIFHALSADADVLDASATSPAAGEVLVSVLSRTGSGAASAALVSKVAAYVSDETRRPLTDFVTVQSAEIVTYAVEATLTTFSGPDGGVVLAAAHANLDAYIASSHRLGRDITRSAIFAALHVEGVQNVELSAPAADIIVSRTQAPHCTGTTINYAGTGE
complement(370885..373245)         hypothetical protein; PP1Y_AT3606                                                    N/A                 MLKVTETGLLKADLARGVNLFTGAGFSTLARNGGGDTLPVGDGLKTLLIKEFGLDAYASLDLAGLYAVLLSDRRVALREFLEKLFTVGTYDDRYDALRRLNPEFLYTTNIDDLPFHIFNARQGEHTRVLHDVTPLGAPRQPGEVVQFVALHGNVRHSDADFLFTPGQISSAFASDRETWYVFQRELQARPTLFLGYGMHDAGVLQGLHDSSSRSQFNRWILLRREDEGATALYTALGFHILFGEIEDFLRYVVDEVGTDAVTQATPSHRAFTGQVPAPGEVAQRPIRNFFLGSEPEWSDAYSNQLVRRRVNAAVKNSIYNGRHVALVGLPLSGKTTVLMQVASEIAPERPVLYFDRITAPQADQIVAEHSGKPDKALVFVDNLIDSRDPIDRLVRDIGAQIVSAEQSIYFDSVGLRSMQGRLDVHSSSEIIPQDLQGIIDSIPVDIRRWHPDNLETVERDSGEVGLFESFRRHVFDENLTSRFRAKLSEFEKRDPVAFDVYMMACYVAACRTVVSFDMIYAFLSGPQKQYTDVYDIAKRIDSFLVEVDLEDDPHQDYFSVRSGALARIALRECQPRAFNRIFSRFHSAVPTRLIVDYPVFRRYAYDNDFARRAYPRVADGQRFYERLVASTENAYDYQHGAIYLSKMKSFTEAFSWIDTALSRSRGRVFSIRNTHARILFEANIDVLRRNLADRTALDGVEESMEVLEQCIKNDARRSYHLLRYSDQALQYAQIADDEKAVAWLQHAFKNLDLIVEQAKVSRSRESYNLRKYRNLMSEVRAALAGR
complement(373534..374205)         PHAGE_Burkho_KS14: gp23; PP1Y_AT3634; phage(gi327198292)                             4e-14               MTDDLAEVERIAGALLRSLSSGKRRAIMRKMARELAISQRQRITAQHQPDGSAFEPRKAKQPPVSGRGTACFLYPAHGGGPPRRVIMKSFTWGTGRSMTGFDIGAGGIRTFEFDKVVKWLPVPEEYRNRGAGKLRRRGGLRRRAMFRRLASSRFLKTQTDDQGFWVGFTGKVSQIASVHQQGLRDRPSLRAKAVPYPRRELLGATPADRERMLDALYLYIAGT
complement(374202..374720)         PHAGE_Pseudo_phiCTX: predicted tail completion; PP1Y_AT3642; phage(gi17313232)       8e-23               MRKADSLRRWLTAFLPDLKTHPDLLQVYLEGGQVGARRSATLSFAYAYTVKALITDFAGDTDTIMVAVLAWIEKEQPQLLQASDNKPFRFEAELLDSETYDIELSIDLTEPVLVIPRVDGSGYDVTHPEEPAFPPMFDGVTASFLQGFGNVQLLAETTDPDAVLTPAIPPDA
complement(374846..375241)         hypothetical protein; PP1Y_AT3649                                                    N/A                 MIGASHLALAGALATCLSGIGGFAYGTHIGVTQERAAQKRADDAADAVRRKLQGQIDASAERAQAAEYARQSSVREIYHESQKVIERPVYRNLCIDADGVRLLDRSAAIANAEGVAQPSGTATAPAEGAAQ
complement(375695..376027)         hypothetical protein; PP1Y_AT3657                                                    N/A                 MDLRTFLPSIADAIGSLTPSLIGSAVAQAWKPGLSWRQRFVQWIVGSTVSFYATRAIIELTGWNDFVAQSIAFGIALLAFDATPRLAKAATDALASVPGRLADRFLPKKD
complement(376032..376256)         PHAGE_Burkho_phiE202: gp46, phage Tail Protein X; PP1Y_AT3661; phage(gi134288782)     2e-08               MAAEQRLVARAGDKLDLLLFREAGLGPSDLTRILDANPGLADLGPILPLGTIVIVPATAEISAPRVRPLIQLWD
complement(376256..376738)         PHAGE_Burkho_KS14: gp31; PP1Y_AT3663; phage(gi327198300)                             1e-30               MTFVARPPEAEIDQAPPAESAVINDGFFPDIEPARVREAARIPTSITPARLRAAILGAIMSVEIDLRTWAKDRMAEGCATLAAVPAPQLDGQSVQSIRYNRAIALFTKAELIERHRDFDTTAAGSNQADELEVSIGELRRDAMHAIRDILGTTRTTVDLI
complement(376859..377653)         PHAGE_Ralsto_phiRSA1: terminase; PP1Y_AT3668; phage(gi145708083)                     9e-35               MSLARRHRDRILASQTVASAPDGGAAAAPAAAPLPAAGAANAAPADRAAAQIALRLTHDLRRLKEIKSIDLKIAAKREMLPHYRDWLVGLHKADAGVGSGIAAEVLPTCMVWMIDVGEYSDALDLAEFMMRHRVEMPARYQRDTATVILEEIAEAALKTQAAGEEFPLAILDGADHLTHGEDMHDQARAKLLKAIGVEQLRRAEESEASTSAPRLNAALDALREAQRLHDRIGVKDRIRRAEKLLVAVTPEPEETNEQGGQNAA
complement(377708..378799)         PHAGE_Burkho_KS14: gp33; PP1Y_AT3678; phage(gi327198302)                             3e-82               MRKETRQLFKSYVSQIALLNGIDVEDAVTKFSVSPAVEQTLEEKIQESSDFLSEINIVGVPQQTGQKVGVTVTRPMASRTDTAGGNRRTPTDPTDTGDNGSYFCRQTNYDHAIKYAKLDAWRHKPQFQTLLRDVILKQQGRDRIMIGFNGTSAAASTDVVANPLLQDVNEGWLHKIRTHAGSRVLNDGDLSVDPTKAIYVAAGVEVVDGDATNTASAEADYANLDALAFDALDLLDPWHRSDTDLVVIVGWKLVKDKYLNLLQAAGETATEREAAHRILTLPKQLAGKRAVIVPFFPETSMLITSLDNLSIYWQEETRRRQIRDEPALDQIENYESVNEDYVVEDYGRTALVENVVMGKKPAA
complement(378851..379660)         PHAGE_Burkho_KS14: gp34; PP1Y_AT3685; phage(gi327198303)                             2e-47               MAKSKFFRVAVEGATVDGRVIQREWLEQMAASYDPATYTARINCEHVAGYSPDRPFNAYGSVLSLKTEEVELSFNGEKKSLLALYAEIDANDQLVEINKAGQKLFTSCEIHPDFAGEGKAYLVGLAVTDQPASLGTEPLKFAALSRPNLFTTAHETALELAAQPLSGEQIGESIGRSLLAFFRKDRKEEEPATPPPAPAPANDNAFDVDRFASVMGLQIAAAVKPANDAVAALGARFDALESKLKATEQPGSFTRAPATGGTGSIKTDC
379836..381689                     PHAGE_Burkho_KS14: gp35; PP1Y_AT3692; phage(gi327198304)                             2e-177              MPIQTPSQPGAPSAAWQFDPRRHARSLYWRGWGVTQIAQEFELFGVVSEKGTPIPRATIEAWKQRDRWDDAPSIRKIEDGLEIRLLTLIAKEKKTSADLVEMDALSRQIESLARVRRYEEPGGHSGDLNPKVGNRNAGPRRKARKNHFTAEQASELKRIFLDGLYDYQLTWWNALSQRTRMILKSRQIGATYYFAFEALIDAIETGRNQIFLSASKAQAHQFRSYIVSFAKLVGVSLTGDPMLITSDLRPEEEAAAELHFLGTNFRTAQGRHGNFYFDEFFWVHSFEELNKVASGMATHKKWRKTYFSTPSSVAHPAYPYWTGERRNRRRKKEDRVSIDVSHKALANGSTGPDRIWRHIVNIEDAEAGGCDLFDIEELRDEYAPDEFANLFLCEFVDDSLSAFRFNDMIACGVDSLVEWTDFNIEAERPYGSRSVWAGYDPQESENGDNAALVIAAPPLVEGGQFRVLERHQLRGLDFEQQAEFIKAILSRYTCTYLGIDAKGVGAGVYQLLAKPGAMPGCSVAKIEYSLELKAQMVMKAQNVVRRGRLAFDVGMLDIVSAFVSIKKTLTSSGRNMTFKAGRGGEDGHADLAWATMHILMNEPLDGKEAPKGTMEII
381710..382738                     PHAGE_Burkho_phi52237: pbsx family phage portal protein; PP1Y_AT3701; phage(gi72537722)     8e-104              MNRREAAEASKGALVASNDNRGRAIEAFTFGDPEPVLNRATMLDMLECWHNRRWYEPPVSMDGLARAFRASPHHSSAIILKRNMLAASLDPTPQLSRRAFAGMVQDYLVLGNAYVREIRNRLGEVMRLEHCLAKYTRRGVEPGHFWWVPGYQQEEEFEQGTVHQLMAPDINQEIYGLPEYLSALQSALLNENATLFRRRYYENGSHAGYILYATGEFANGDVDAMREALKKSKGPGNFRNLFVHAANGKETGIKLLPIAEVAAKDEFLGIKNTTRDDVLAAHRVPPQLLGIVPANAGGFGDVTKATDAFFELEIAPLQSVFLELNDVLGFEAVRFWERATAA
complement(382916..383695)         endonuclease; PP1Y_AT3714                                                            N/A                 MASRYAKLIEAIFFDHHNADLTEFEFERAELETQAEALRIGLPKNLGDVVYSFRYRNPLPDRILDTQPHGLEWIVEGAGHGRYRFRLVSANRVQPREDLVRIAIPDATPELIRMYALDDEQALLAIVRYNRLIDTFLGLTTYSLQNHLRTTVKGIGQIEIDELYVGLDKRGCHYVIPVQAKGGNDQIGIVQTSQDIRWVEQKYPDMSCRAIAAQFMADDVVALFELTLQDDEVRVVDEKHYRLVPWKELDPRAIVSYRE
complement(383688..385025)         PHAGE_Natria_PhiCh1: M.PhiCh1-II; PP1Y_AT3725; phage(gi22091184)                     2e-30               MSRPIGVDLFAGAGGLSLGFEQAGFDVAAAVEIDPVHCAVHEFNFPDTAVIPRSVAELKGSDIRLAAGIGTRPVDCVFGGPPCQGFSMIGHRVLDDPRNRLVLDFVRIVSELDAKTFVFENVKGLTVGKHRQFLAELVEAFDAAGYQVGQPWQVLDAAHFGVPQHRERLILIGAKKGLPLPAYPKPSTSPADGKRAVKDLPNGPTCSEALDDLPDADKFAALECGDAVRTKRYGEPSSYAAELRALTNNAWHFGYVRNWERDVLTSSARTTHTDISRRRFSETQPGTVEPISRFFRLPPNGLSNTLRAGTDGARGAFTSPRPIHHRYDRCVTVREMARLHGFPDWFRLHATKWHGARQIGNAVAPPMARAIASKVIEALGVAPKRPERAINLGDPKLLDLEMSQAAAHFGVPAPNSRRDRKSGAKKRKQEEIEEARQALVRSAHG
complement(385072..385509)         PHAGE_Burkho_AH2: Vsr endonuclease; PP1Y_AT3742; phage(gi399529071)                  9e-34               MADTRTAVQRRRIMQSVGTKNTGPELAVRKALTELGYRYRLHRKDLPGSPDIAFIGRRKAIFVHGCFWHGHECQKGKAPKSRLDYWGPKLAANVERDKRKAQELCDLGWSVLTVWQCELSDFAGVRERLINFLGKPPRECKTSRA
complement(385936..386547)         replication protein A; PP1Y_AT3758                                                   N/A                 MPISMNAKAVLDALLSVMDGKSGRCDPSLDTIARRSRLSRRTVVRQLNVLRELRIIDWVRRTVKTGNARGEGPQRQQTSNAYFIDMLKLPIEIVRTLRQKLGARLREKVRHLEGSGSVPNRMAIKAERLLKSVTGALSATARRDGASRRALAGSSLSSRLAHMYAGNPDAIREHEEMLSLSSATSASAKLALYPVLRTEREVD
complement(386687..388060)         PHAGE_Stenot_S1: putative integrase; PP1Y_AT3766; phage(gi213163927)                 3e-63               MGYWGYRLLLTDAACRKAIPSEKDRKMFDDRGLYLFVRRSGSKLWRLKYRFAGKEKSLSIGPYPEVSISQARQARDRALQQLRDGIDPSAEKQSRKAQAVADALDSFEKVARAWHAAKATTLAPRYSAAVLSRLENNVFPALGQKPIRSITPPMVLAVIRKIEKRGAHDMAHRVRNHMSDVFVWAIASGLSENDPAAIIRKALVPTDPKLRPAMIKITGARKLLADIEALAGTHWSTLLASRLLALTAARPGVVRLAEKQEFEGLDGAAPIWRIPAEKMKLTRAQKRDISWEFVIPLSRQAAEVAKAAISESLACHASDGPSWLFPGTGAWKRPISDSTLSKLYRDAGFTGVHVPHGWRSTFSTIMNERAALEDQERDRAIIDLMLAHAQQGVEPIYNRALYLPRRRELAQDWADLLMKDAVAPQFLLPEYRPWRAKSGETGHERRARIRRPLAQKL
388183..388202                     attR                                                                                 N/A                 AAGTGGATGCCCCGCGAGGA

#### region 2 ####
3730993..3732318                   PHAGE_Strept_6: terminase large subunit; PP1Y_AT35532; phage(gi93007440)             3e-54               MRRSERLAWLLSLPLRERRRRVRELSEAEQAEFLTHWRLWARPGQLPPAGDWRTWLVMAGRGFGKTRAGAEWVRSIAESDPAARIALVGATLPEVRAVMVEGESGLLAISPPCRAPGFEPSLRRLIWPSGAQALLYSAGEPESLRGPQHSHAWCDEIAKWDNAGGKAGRTWDNLLFGLRLGDRAQAMATTTPRAVPLVQRLLAEPGDELAITRGRTEDNRDNLPPSYLRDMRRTFGKSLLGRQELDGELLDDIEGALWTRVLIEATRTSAPAEPVRVVIGVDPPASAGGDACGIVVAARCGEGRGHVLADASVEKASPERWARAVAGAAAAWQADRVVAEANQGGAMVASVLRAADVSLPIRLVHASRGKVARAEPVAALYEAGKVRHAGQFPALEDELCGLIAGGAYQGPGRSPDRADALVWALTELLLDRPAAPRVRVT
3732343..3733503                   PHAGE_Strept_6: portal protein; PP1Y_AT35547; phage(gi93007441)                      2e-17               MSFIDTLAAAFKGESARAPLARRPASPWFFADGGGGRIPFEYNRAVRQAYLDNPVAQRAVRLVAEGIAGAPLQSGDPGLMALVAATSAGQSLLETIASHLLLHGNAYVQVIKDGRGRPAELFALRPERMTIVAGDDGWPSAFTYAVAGRQLTIPLLDEDASPNLIHIRHFHPADDHYGAGCLTAANEAIATHNAASHWNRQLLENAARPSGALVYEAGDGNALTGDQFERLRSELSSAFAGSGNAGRPMLLEGGLKWQAMALSPADMDFATLKAAAARDIALAFGVPPMLLGLPGDSTYANYREANRALWRLTLLPLAAKLLAAIGEGLAPWFPDATLAVDLDRIPALAEDRERLWAQVGAAEFLAASEKRALLGLPERPDHAEDK
3733503..3733811                   hypothetical protein; PP1Y_AT35558                                                   N/A                 MTKSDMLTGLVSQAADKGNDIVTLRAIVEEASELGASRMLERIGLDDATAHEDVSELRELLQAWRDAKASAQTAAIGWIVRGLLALLLLGIAVRLGATELLR
3733808..3734206                   PHAGE_Marino_P12026: phage prohead protease; PP1Y_AT35556; phage(gi399528321)        1e-14               MNGPRFAGYAALFDRPDAGRDTIRSGAFARTLAERRDPVPLFWQHRPDLRIGWVESLAEDARGLRVIAALDNTQGGAALSLRRGAVSGLSFGYRARASRSGRKGRELLDIDLFEVSLVTRPMQHGARVHLVC
3734264..3735400                   PHAGE_Salmon_ST64B: Major capsid protein precursor; PP1Y_AT35562; phage(gi23505451)     3e-84               METPVPTENLEASFDLVARQDATEAAVAEIRTDVADVKSRLERVSRAAARPVIAGSAPASPEVKGFVEGYLRHGRETELKSISGAVAADGGYAVPQEIDALIASRLTAISPIRAIAQVVQTGSAGYRKLVTTGGTASGWVSETAARPQTDTPSFAEIAPPTGELYANPAASQTMLDDAVFDLQSWLADEIATEFARAEGAAFVGGDGVNQPMGFLSAPTSTAADAARTFGTLQHLVSGDAGGFDTAPDLKLIDLVHALKAGHRQGASWVMNSATLAEVRKLKTSDGAFVWQPGLVEGQPDRLLGYPVIEAEDMPDIAAGQCPIAFGNFRAGYLIAERSATAILRDPYTNKPFVHFYATKRIGGQVLDSDAIKLLKIAA
3735461..3736009                   PHAGE_Rhizob_3: p008; PP1Y_AT35568; phage(gi195546539)                               7e-05               MNRVILSPATLPSSALAEIKQWLGITTTQDDGALQALLETALDLFESFTGQRPLESECEEILDAASGWLTLATRPVHAITALYAVRSDGTRAQLAADRYDIDLDADGTGRVRLLTNVPDRRIAVRFTAGLAAEWDDLPPPLRHGVIRLAAHQHRERETEGAAPLPPASVAALWRPWRSLRLA
3736192..3736581                   hypothetical protein; PP1Y_AT35572                                                   N/A                 MEVPLRAALLDWLAADAALAEQLNAIVEEAPLRTSLPWLAIAASASIDWSTKTASGREVRVALELHCRGDRPDAAATLVTAIEARIEAMPREQSGFSIVSARFLRARAEQRTESRRAILLEYRFRLLSQ
3736617..3737024                   PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; PP1Y_AT35574; phage(gi461474972)     4e-12               MSAQKGSAFLLKISDGGDPAAFQTVAGLRTTQMSVTGEPVVVTSKDSGGWRELLSGAGVRAVSVSAAGIFLGSAAEAQIRANAMNGTLDSYELSFEDGEKLRGSFLVQRLDYAGDFNGERNYTLQLESSGEVSAA
3737021..3737353                   hypothetical protein; PP1Y_AT35580                                                   N/A                 MRQAQADRAPPNPLRGEAALDIDGSAHVLRPTFSALVAAEEELGPLFALVERAGAGELRLSELAALFWHCLADRQSLSREAIGEAIARCGLAACAGPLRALLSQILKGSG
3737537..3738112                   PHAGE_Cyanop_MED4_184: tail tape measure protein; PP1Y_AT35588; phage(gi472340568)     4e-06               MDDEIESLLVDVRASTEGFSRDIAAMRTSVETDLVSGFTKAGDALERSLSGAIRSGSMGFDDLKRVASEALGAIAAQAAQGLTSALGIGAGASGGPVDFGSILGSALGLPGRATGGNVSPGRGYLVGERGPELFVPTSAGRVEPGSAGQLAGRDVRVSINLVAPRGSSAPQSLQRSSRQVASAVRRALSRS
3738179..3740509                   PHAGE_Escher_phAPEC8: hypothetical protein; PP1Y_AT35594; phage(gi448260438)         3e-46               MAFWLASQRQGQASDWIQRFDARFWTVNFPRPMVATVISTAADALRVDASFLRKADLGGLIWASEDTLDHPLLAYRTDRNYAHTSLRFRWRSGGVLPLDAVYGPTLTIEGRDESGAARTWYVRLWNYAEGNGEDAQIDLRFSDLESGFSLPGERIWPGDIDRMFISFAPRGYDGSADPLPAEAEGWIEISEIAVGGSRAMLEIGDVMMPPHGLALATGFDDQGVQTPARLLRNVRQLGYRGSVVLYLGMSHYFRLAAKDGSYLTGSSADPLNTPTRNWHRTFFAECLRLGFSPMASLSYELLDQHCPEGWKQRDHLGQPALTGWAPPSTVLSPANDAAMAWLQSVAAEFALLMAEAGAPVRFQVGEPWWWTFADGRICLYDEAAVAALGGAPPAISDMRAALDDAQKALLDAAGALLAQSTADVIAAVRGAVAPEPVEALALVFTPTLLDPEMPELKRANLPLGWAAPAFDRLQVEDYDWLTAGADAPRRRAYEEVNARLGYPPEEQDYLAGFVLYQTQADQWRLIDAGIDEATLRAPHEIVVWALPQIARDGFVRLPSIASQGSAMQAFDDVPYPLRLGHDASVSPEFSTAVSVTASGFERRNSLWSDARLRFDVGPGIRSEQELGQLIAFFRARRGPARGFRLRDPSDYSSNAMTGTPTALDQSIGIGDGARTAFALVKRYGEGEEAQVRRITRPDFATILISVDGTVQAGNWSLVGGGTILFDDPPAAGSVVRAGFLFDVPVRFAEDRLDISGAAFAAGEAPSVPVIEIREAA
3740506..3741330                   PHAGE_Tetras_SI1: hypothetical protein; PP1Y_AT35611; phage(gi472342235)             6e-29               MTRTWFAQDLETVATFWRILRRDGVTFGFTTHDRDLWFDGVLHGASPGMVPSSIRKRADLDPDSVEVQGMLSDDAISGADLASGRFDGSRVLIGLIDWETLERMTLYSGTLGEVTQEGEDFSASLASRKAELQRDPIPRASPTCRAAFCGPGCNLNPQRFTREVKLLTIDARANAATFETDVDAALYVGGELRWVDGPRAGIAMTIMSADPAGGLVLDAPLDEATPPGSAAVLREGCDRTLETCAARFGNAVNFRGEPFLPGNDMLTRYPSPIQ
3741744..3743939                   PHAGE_Tetras_SI1: hypothetical protein; PP1Y_AT35629; phage(gi472342233)             2e-54               MATLIFSTVGTAFGGPIGGMIGSLVGQGVDTAIFGSDRREGPRLQELQVTASTYGQPLPRHFGAMRVAGSIIWATDLIEHSETQGGGKGAPAVTTYSYTANLAVALASRPILGIGRIWADGKLLRGAEGDLKVGGTMRLYTGEGDQPPDPLIASSEGAALCPAYRGLAYVVFEDLDLSEYYNRLPAMTFEVLADESFDLQDVVGELVDAIDAQVPLDGIGGYTADGPVAQSIETFDLVIPLSVSGNGEALAISHESRGESPVPLPAAAISVEDGDFGGPLGFTRHRLPASQHPVRCLRYFDAARDYLPGIQYASGSPPPGQPRCIELPAALDAEKARALIERASRRIDWTRERMAWRSCELDPAIVPGSTVSVPGVAGAWRVAEWEWRASGVELSLERLPPPGAIGTPGLKADSGRANLPADLPTASTELVAFELPLGTANGNADTPHAFVAVSAGSSNWSGAALYADRGDGEMLPLGPSGRTRSTIGAAATRLEPGHPLLFDRERSVEVTLVDPAMSLGPASLRQMAQGANLALLGEEIVQFAKALPLGEGRWELSGFLRGRGGTERAMADHAIGERFVLLDSRLVALDASTLGTSDGRQVLAIGRGDSEPATASILLAGITLRPLAPVHPRHAIRSDGSLHLAWTRRARGAWPWQDGVDVPLVEEAERYLVTLGPLDAPAASWHTQTPELAIAPNVLAQLSAAYPAQPLHVRQQGTHALSAPLLLRPVS
3743963..3744421                   PHAGE_Tetras_SI1: hypothetical protein; PP1Y_AT35644; phage(gi472342232)             9e-06               MSDPVIFESNSPRLALPLLYSGQAGKEILVNEAFARIDAAVHCTILGENPEPPENPAEGDSWLVSADSQGEWAGHEHEIAARQGGNWIFLQPHDGMRIFDRSSGQERLFFAFWRKGSILEEPVGGSTVDEEARASINEIIAVLQALGISPSA
3744614..3745669                   PHAGE_Human__4: EBNA-2; PP1Y_AT35659; phage(gi82503202)                              4e-10               MRKLVIGLALASTAIATPAFARDDSWYLELDFGGMIVEDADFDIDGVNNAATLDTHTGYDGGAAIGYDFGGFRLETEASYRRAENDTVSDIDLGTFSDRGHSSMLSFMVNGLLDFGPDDGIQGFVGGGVGVGRVDYRFEGVGSDSDTGFAWQALAGVRAPITKHWDAGLKYRFMNVDNVDVVLGGSDASTRWRSHSLMATLGYNFGGEEAAPPPRPPPPPPPPPPPPPPPPPPVVCNKGPYIVFFDWDKSDITPEAATILDSAVSAYGNCDNVPIMLAGYTDRSGTVKYNMGLSERRNASVRSYLTSHGIPDGAISSEAFGEANPRVPTADGVRELQNRRVEITYGPGSGM
complement(3745832..3746527)       PHAGE_Mycoba_Qyrzula: gp3; PP1Y_AT35671; phage(gi109521761)                          4e-25               MQDHSSNQPRQAVVLLSGGLDSMVSAGLAKEAGFAVNALTIDYNQRHRREIDAARRIAEELRAERHVVLPLDLRRFGGSALTDDIDVPKDGVGPDIPVTYVPARNLVFLSLTLAWAETVGAKDIYIGVNALDYSGYPDCRPEFIAAFENIATLATKVGAQGNAFTIHAPLQYMSKAEIASEAHRLGLDAGMSWSCYDPQPDGRACGLCDSCRLRKAGFEQAGLVDNTDYAA
complement(3746566..3746967)       hypothetical protein; PP1Y_AT35680                                                   N/A                 MSKLALAMLFGGASLAVALPAYGERNSLSMLDHLESGDWELRQRDGAGQSNICLDSGRKLIQLRHPGLNCSSVVVEDTPNEVTVQYTCRGQGYGRTHIRRETDSLVQIDTQGIVNGRPFVYAAEARRIGNCRS
complement(3747083..3747973)       molecular chaperone Hsp33; PP1Y_AT35687                                              N/A                 MNEETGFDRVLAFTVPDRHARGRLVRLGPALETVLSAHDYPKKVKHLLAEALVLTALMGSLLKENGSQLTVQAQADGGPIDLLVCDYRDGEIRGYVRHDDDLLAQLGEDETSLEALFGKGYFAITFDLAVTKERYQGVVPLEGESLAQACESYFAQSEQVPTLIRVAVRSNDPRCVAGGLLVQHLPEGEEGKARLHAQEDHPDWAHVSIMAGSTKPEELVDPVLNLEQLVWRLFHEESEVRVEQLGHLRRGCRCTVEHYLSILSRFEEKELAEMRDDDGTIPVDCAFCSKVLQIPV
complement(3747991..3748917)       PHAGE_Parame_NY2A: hypothetical protein NY2A_B222R; PP1Y_AT35693; phage(gi157952526)     2e-16               MTRHFLSLSDAGGDTLAAMLNDAIDRKAARKDWPKARVDADGPLAGHVLAMIFEKNSTRTRVSFDMAMRQLGGSALIMEAGSTQLGRGETVADTARVLSRMVDAIMIRTDDHAKIEELAHYAEVPVINGLTDLSHPCQIVADLLTVVERGFALPGLQVAWLGDGNNVANSLIEAAGQMKFTVRIGGPAGYEPNAGFIEQARAAGGEVILTQDPTEAVKGAQVVVTDTWVSMGQPGGEKHVAAMQPYQVNTALMAQADPRAMFLHCLPAHREEEVTNEVIDGPQSAVWDEAENRLHAQKSVLLWALGKL
complement(3748917..3750107)       PHAGE_Mycoba_Myrna: gp183; PP1Y_AT35701; phage(gi203454746)                          2e-13               MSITPLMPVYPRCGVRPVRGEHCHLISEDGRRFLDFASGIAVNALGHSHKGLIGALQKQAETLMHVSNLYGSPQGEAIAQRLVDLTFADTVFFTNSGAEAVECAIKTARAYHQSVGNDGKYELITFNNAFHGRTMATISASSQEKMHKGFLPLLPGFKYVDFNDLEAAKAAIGPNTAGFLVEPIQGEGGIRIADEAFLQGLRQLCDEHDLMLVLDEVQSGVGRSGTLYAYEQYGIEPDIMATAKGIGGGFPVGACLATEKAARGMVAGTHGSTYGGNPFAMAAIGAVLDVIADDEFLEGVRATGERLKARLEQFIGNYPDLFELVRGRGLFIGLKMKVEPRPFVAHMRDNQQVLAVSAGDNVVRVLPPLVIDDSHIDEFMEKLSAAAASYNPEEVS
