gi|337283511|ref|NC_015680.1|  Pyrococcus yayanosii CH1 chromosome, complete genome. 1716818, gc%: 51.64%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
267765..268190                     PHAGE_Mycoba_Damien_NC_024371: major capsid protein; PYCH_03250; phage(gi658311248)     2.89e-07            PyrococcusyayanosiiCH1MRLRIPAELLEEIVSAASESNVEVCGFLFGERRGDEWVVRKVTFVKNRLNSPTAFEMEPEDMVKALDDAEKENLEVVGIFHSHVSCPPRPSSKDVKGMTLWPVPWLIVTGHKVAAFMLEKGKPKEIELKIISRCQSSRTLP
complement(268156..268395)         hypothetical protein; PYCH_03260                                                     N/A                 PyrococcusyayanosiiCH1MTEIRHYKIGEDRFKISEDEVARRELKVTKVADDVIQIQEEIHGIIALVGATSTVNIKKDELKELIKIVREEFGWTDIC
268512..268587                     tRNA                                                                                 N/A                 CCGCCGTAGCTTAGCTGGTGGAGCGCCGGACTGTTAATCCGGCGGTCCCCGGTTCGAATCCGGGCGGCGGCGCCAG
268592..268669                     tRNA                                                                                 N/A                 GGCCCGTAGCTCAGCCTGGTCAGAGCGCGCGGCTCATAACCGCGTGGTCCGGGGTTCAAATCCCCGCGGGCCCACCAT
complement(268669..269421)         hypothetical protein; PYCH_03270                                                     N/A                 PyrococcusyayanosiiCH1MLLYASLTSLTVFTFAVLVKKPKGWNSLRKNLQSAILGFLNPFLYYLVLFNAYSILPAQEAQALNYTWPLILTVFAWLFLSQPLRVRGIFGVFMGFLGALIVSSKGSIGSLSLSNILGDLLALSSALIWASYWVLNLRDGRKAEVKMFWNFLFGSLYILTYVAWRGKLVLDALGIIGSVYVGLFEMGVTFLLWLRALEKEEASKVAGLVYLTPVLSLFFITTIVREPLRASTIVGLALILMGARIARGRG
269420..269539                     hypothetical protein; PYCH_03280                                                     N/A                 PyrococcusyayanosiiCH1MLAGLILERVSLNAEATVDQRRIASRALWFMGENRERSF
complement(269629..269829)         50S ribosomal protein L24e; PYCH_03290                                               N/A                 PyrococcusyayanosiiCH1MARWNICSYCGKPFEPGTGKMFVRNDGRVFFFCSRKCERYFFMGRNPRKLKWTKAYQEARLQRGKK
complement(269835..270050)         30S ribosomal protein S28e; PYCH_03300                                               N/A                 PyrococcusyayanosiiCH1MAEDEGYPAEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNVRGPVRVGDILILRETEREAREIKSRR
complement(270093..270464)         50S ribosomal protein L7Ae; PYCH_03310                                               N/A                 PyrococcusyayanosiiCH1MAKPSYVKFEVPKELAEKALEAVEIARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVAIIEPGKAKELVEEIAMKVRELMK
270573..271169                     PROPHAGE_Escher_MG1655: rhomboid intramembrane serine protease; PYCH_03320; phage(gi49176353)     4.99e-05            PyrococcusyayanosiiCH1MGANLRNLVKYFPATAGLLTIIALVFIYELIVGFDTAIVQLAQINLLVFYAGQWWRLVTAIFVHMGFIHFALNTFWLFYLGMDLEGIVGSKRFLLVFFLSAIVGNVLSLFTLPLDVASGGASGGLFGIVGASLAIEGVLKRNMQKALMNAIILFLINSIFPGVNIVAHFGGLAAGLALGYIYGRWLRRKLMDMSYWFE
complement(271170..271874)         PHAGE_Aeropy_1_NC_028268: hypothetical protein; PYCH_03330; phage(gi948298243)       2.96e-21            PyrococcusyayanosiiCH1MGKRGSGSLSPEGFAFEESWAEKKRRAEEIVRILKEVYPRERHVSGEPYRTLIKCIISQRNRDEVTDRVAEELFRKYPTINDIANASVEKMQEFLRSLKVGLWRSKGRWIVEVSRIILERYDGRVPDTLEELMKLPGIGRKCANIVLAYGFGKPAIPVDTHVNRVSKRLGLAPLEASPEKVEEYLKVLIPKEEWLYVNHAMVDHGKKVCRPIKPKCNECPVRNLCPKVGIKFGT
complement(271840..272271)         cell division protein 48 (CDC48), domain 2; PYCH_03340                               N/A                 PyrococcusyayanosiiCH1MRLVLKPLFDVELPVGFEDILRAKLKGRVVKTGQEIEVDLLGKPLRFQVLYAEPEPLIVNDRTRVEITGGDTFILDIEFDEPVKGVIPFEKGFVIVFPKKVLILNQNGQKIYSDEFEELNEVSVSGDVVVIVHGEKRVRLIKP
complement(272272..272718)         transcription regulator; PYCH_03350                                                  N/A                 PyrococcusyayanosiiCH1MLDELDRGILQILQEDGRVSYAEIARKLGVPESTVRLRVRKLVERGVIRKFAALINPFKAGYEVVAVIAVDTEPSKVKKVAEELAKLPEVDVLGIATGAHDIFMQVTVRSLRELEEFLIEKLGKIDGVKSTETSILTSVKKWGYARVF
272837..274168                     PHAGE_Mycoba_Lukilu_NC_041901: chaperone for tail fiber formation; PYCH_03360; phage(gi100190)     3.52e-10            PyrococcusyayanosiiCH1MDPEEVVAGYERVIAPANRTTYFPLVPVRAENARIWDVKGREYIDFLSDAAVQNVGHNNPRIVMAIKEQAERLLHASFIYAFPIEPLLLAEKLVQLVPIRNAKVSFGLSGADANDGAIKFARAYTGRLTILSYMRSFYGSTYGAMSITGLDFHVRALVGELSGVHYIPFPNCYRCPFGKESGKCRFECVEYLKEKFEGEVYAEGVAALFAEAIQGDAGMVVPPENYFKRIERILDEHGILLVVDEIQSGLGRTGKWFAIEHFGVEPDIITVAKPLGGGLPISATIGRAEIMDALPPLSHAFTLSGNPTAARAALAVIEEIEEKDLVKRAERLGEKAKRRLERMKARHELIGDVRGLGLMLGVELVKDRETKERALDETKKVVWRAFELGLIVAFLQGNVLRIQPPLTIEEELLEEGLERLEEAIEDVEAGKVPDDVVKKVRGW
274320..274775                     PHAGE_Bacill_0305phi8_36_NC_009760: predicted transcription regulator; PYCH_03370; phage(gi156564189)     6.02e-07            PyrococcusyayanosiiCH1MERPRLRGYLKLLILHMLRENPMHGYAIMSELEKRYGIPGPSAGAVYPVLSELKRLGLIEVTGQGKREKKVYSITQEGFEFLEENKGKLEEILRKVEAYKEFSKLGGRELAKTMKELLEKLPEMSEEEKEKIREEILEFTRKIRLILLGGD
274776..275762                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; PYCH_03380; phage(gi371496158)       3.56e-22            PyrococcusyayanosiiCH1MYAIEVENLVKKYGDFEAVRGISFKIKRGEIFAFLGPNGAGKTTTVHVLTTLLRPTSGRAIVAGHDVVEEPMEVRRKIGIVFQDPSVDRELTAWENMYIHGRIYGLGGRELRERIERLLKFVELWEFRDRPVKFFSGGMQRRLEIARALLHEPEVLFLDEPTIGLDPQTRAKIWEYIRTMKEEHDMTIFLTTHYMDEAEQLADRIAIMDHGKIIAEGAAEELKKLVGNDIIYLRLESPEEELKRLKAEFIRGCKLLPDGRVRLDVENAAEALPKLFELAQRSGVKILEVTYHRPTLNDVFLHLTGREIRDEGSDGNVARMIMRARMRR
275768..276535                     ABC type transporter permease; PYCH_03390                                            N/A                 PyrococcusyayanosiiCH1MRVLTTMIYRELKRFLHSRARVVGSLLNPLIWLIFFGKGWAGAFKFPGANMLFGGVDYMTFMVPGIVAMTVFNMGFMQGITLIWDRQFGFLKELLVAPASRVEAIIGRSVGGALMAIIQGTIILALSFLIVDGLKLSGVFPTLALAFLVGVAVSGLGMAIGMRMTTMEGFQIIITMLMLPMTFLSGAFYPVSTMPDWMQFLAKLNPLTYAVDGARYYLAGIEPTFGIATDWAVLSTLAVVFVGIAALEFRKATID
complement(276595..279756)         PHAGE_Staphy_phiIPLA_C1C_NC_028962: DNA helicase; PYCH_03400; phage(gi971761154)     5.05e-07            PyrococcusyayanosiiCH1MKRIRQPIIAVLGHVDHGKCLLPEERVVVPGLGSLTLEELFEIADEIVERDDEKEIRKLRIPLTAVDGNGAIAMVEGSYVWRLRHRGKIVRVKLKNWHSVSVTPEHPFLTTRGWKRADQLKPGDYVAVPRYIHGNESRERFMAFVYSKLSKRDGRYARLPRSDDEWRAFFYFAGVMFGDGSQKVTNDYAEVFERLESIEKLGVELKLLRVLFDYSDGIPDVLFLAPKDYVAEFLRGYFDVHGSLEDDRVEVTGASREFIEGLSLVLLRFGIVSKIYRSGYTTLVISGRRNLDAFRRHIGFTVREKAEMLKRAIDKSRGSEAYPIFEELKRLRLLFGFTRAELDSEVPFYSKYEESEAPSYETLMQILDAIERGSPTLAKKIAVLEGRAKDVNYLKALERDGLIKDGHLTELGRELLEVWRNREFDSRDVEYVRNIAESLVFIPVEAVEELDYDGYVYDLTTETHNFIANGVLVHNTTLLDRIRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFTSLRARGGSLADLAVLVVDINEGFQPQTIESIEILRRYKTPFVVAANKIDRIRGWVIEEDEPFLVNIKKQDQRVVQELETKLWELIGKFYEMGFQANRFDRVQNFTRELAIVPISAKYGIGIPELLVLIAGLSQKYLEEKLRIEVEGPGRGTILEVREEPGLGTTIDVIIYDGTLRKDDIIVVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDQVEEVTAAAGVKIAAPDLEEALAGSPVIAARTEEEIERAKQEILSQIQSVVISTGKVGVIVKADTLGSLEALSKELQEKNIPIRKADVGNISKTDVMEALSVKEEEEKYGVVLGFNVKVNEDAEEVAKAKGVPIFVGNVIYKLIEDYEAWMKAEEEKKKRELLSRVTFPGVIRLYPDERYVFRRSNPAIVGIEVLEGRIKPGVTLIKQNGQKVGVIKSIKSRDEFLQEARKGQAVAIAIEGAIVGRHIHPGEILYVDIGRDDAIILLKQLRSELEDTDIKALKMTAEVKAKEDPFWRAI
