gi|339324158|ref|NC_015726.1|  Cupriavidus necator N-1 chromosome chromosome 1, complete 3872936, gc%: 66.49%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
838354..839736                     PHAGE_Bacill_SP_15_NC_031245: hypothetical protein; CNE_1c08150; phage(gi100146)     4.42e-85            CupriavidusnecatorN1MKVTIIGSGYVGLVTGACLAELGNDVFCLDLDEQKIALLNAGGVPIYEPGLLELIQRNRAAGRLTFSTDVAASVEHADVQFIAVGTPPDEDGSADLKYVLAAARNIGRHMTGFKVVVDKSTVPVGTGDRVAAAIREELVARSLEDLQFSVVSNPEFLKEGAAVEDFMRPDRIVLGCNADVAGRHAQATMRQLYAPFNRHHERTFYMDVRSAEFTKYAANSMLATRISFMNELANLADEVGADIELVRMGIGSDPRIGYSFLYAGAGYGGSCFPKDVQALMRTAADHGKPMRVLEAVESVNGAQKRVLGDKVVRRFGDDLTGRTFAVWGLAFKPNTDDMREAPSRVLARELVSRGASLRMHDPVSMAEARRVLDADLADLPGGAARVSFHENQMDALDGADALVIVTEWKVFRSPDFGQIKRRLKTPVIFDGRNLYEPEAMVENGVEYHAIGRPTRPAVNE
839817..840764                     PHAGE_Synech_S_CAM3_NC_031906: baseplate hub subunit; CNE_1c08160; phage(gi100107)     1.74e-12            CupriavidusnecatorN1MNKTVIPQEQIRQSHILVVGDMMLDRYWFGDVERISPEAPVPVVQVKRSDERLGGAANVARNAAALGARVGMLGVVGDDEPARTLETLLGESHVQPYLHRDPKLNTTIKLRVVAHQQQLLRVDFESAPAHEVLAAVQDRFLALINDYQVLVLSDYGKGGLTHVTRMIDASRAAGRKVLIDPKGDDYSRYRGATLITPNRAEMRAVVGAWKTEADLTIRAQNLRRGLQLEALLLTRSEEGMTLYTEAEVLHVSAQAREVYDVSGAGDTVIATLATMLGAGVPLKEAVQLANRAGAIVVGKLGTAVVSYSELFGAAP
840793..841788                     PHAGE_Prochl_P_SSM2_NC_006883: putative nucleotide-sugar epimerase; CNE_1c08170; phage(gi61806184)     2.26e-34            CupriavidusnecatorN1MTIIVTGAAGFIGSNLVKGLNDRGETNVIAVDNLTRADKFHNLVDCEISDYLDKQDFLARLARGEFGKVRAVFHEGACSDTMETDGRYMMENNYRYTLSLMESCLEQGTQFLYASSAATYGASQVFREDREFERPLNVYGYSKFLFDQIVRRRLPSALSQIVGFRYFNVYGPRETHKGRMASVAYHNFNQFRADGTVKLFGEYGGYAPGMQSRDFVSVEDVVKVNLHFFDHPDKSGIFNLGTGRAQPFNDIAATVVNTLREAEGKPRLSLEELVQEGLLEYVKFPDALRGKYQCFTQSDVSKLRSAGYSEPFLSVEEGVARYCRWLIERAG
841852..841863                     attL                                                                                 N/A                 GCCGCCGCTGCG
842091..842330                     hypothetical protein; CNE_1c08180                                                    N/A                 CupriavidusnecatorN1MGPATARNIIDERNKRGPYKDAADLAERVSGIGPKSVAKLQDAGLAIGTKGTAAAAPPAAATPAKTAKAAPAGAAKPAR
842568..843869                     PHAGE_Clostr_c_st_NC_007581: putative uracil permease; CNE_1c08190; phage(gi80159777)     1.49e-26            CupriavidusnecatorN1MANGEDAGFLPQWRLKTEGVIGPDERLPAGQTLLAGIQHVVAMFGSTAIAPILMGFNPNIAILFSGIGTLIFFLCVRGRVPSYLGSSFAFIAVVIAATGYAGSGPNLNIPVALGGIIAAGALYTVIGLIVQAVGYAWVEKLMPPVVTGAIVAAIGLNLAPVAVKAVSGAALDTWVGLLTVVAVGLVAVRAPGMIGRLPVLIGGLAGYLAYYLGTNVMGLGKPIDFSGVAAASWFGLPAFTAPTFEFSAMLLIAPVAIVLVAENLGHIKAIGVMTGRNLDPYIGRAFIGDGIATMLSASGGGTGVTTYAENMGVMAVTKIYSTLIFVVAAAVAILLGFSPKFGALILTIPGPVIGGLTIVVFGLIAATAGRIWVQNKVDFSSSRNLITVGATLTVAAGDLTLKLGGMTLGGIGTATFGCILLYHLLGEGNHEEG
844005..844907                     PHAGE_Lactoc_P087_NC_012663: putative cysteine synthase; CNE_1c08200; phage(gi229605000)     3.99e-59            CupriavidusnecatorN1MAYKTIEDTIGNTPLVRLQRIPGAANDARGNVILGKLEGNNPAGSVKDRPAVSMIARAEARGRIKPGDTLIEATSGNTGIALAMAAAIRGYKMVLIMPEDLSLERRQSMAAYGAEIILTPVKGGMEYARDLADSMERDGKGVILDQFANPDNPQAHYEGTGPEIWRDTDGRITHFVSAMGTTGTITGVSRYLKEQNPEIQVIGAQPADGSRIPGIRKWPEAYLPKIYDASYIDRTEPVSQGDAEHMARRMASEEGIFCGISAAGALCVALRIAEEVENATIVFVVCDRGDRYLSTGVFPA
complement(844977..846083)         membrane-bound lytic murein transglycosylase B; CNE_1c08210                          N/A                 CupriavidusnecatorN1MTDTQRSLRRPLLGAALSAAALGLCGLSPSLLAAGKRRVSMREEEIEPGRYRDNPQTRAFIDEMVARHRLDRGMLQEWFSQAVYSATVVRLIMPPATTGRKSWRTYRSRFIEPIRINAGVRFWQDNRDTLRRAEAEFGVPASVIVGIIGVETIYGRDMGTFRVLDSLSTLAFDYPDTPNREARSTLFRNQLADYLLWCRDTRTDVYSVLGSFAGAIGIPQFMPTSLREYAIDYDNNGRIDLRNSPTDAIGSVARFLQLHGWEPGRPVVWRIAGDAGSLGVATAAADGEPWPTRTLNQLTRAGLRVDEPIDPVREGETGVLVVDLPTPDQPTEYLLGLRNFYVLTRYNRSFFYALAVYQLGEAVKAAMG
846233..847156                     PHAGE_Rhodoc_E3_NC_021347: putative histone deacetylase protein; CNE_1c08220; phage(gi509142389)     3.91e-16            CupriavidusnecatorN1MPTGYYTHPEFQRHEMGHFHPECPERLQAIEDHLISHGLDGLLERREAPPATREQLERVHRPDYVDSLERASPASGYHAIDPDTSMNSHTLAAATLAAGAAVAATDAVIAGEFENAFCCVRPPGHHAEPDRAMGFCFYNNVAIAARHALRAHGLERVAIIDFDVHHGNGTEAAFRGDEQVMMCSIFQHPFYPYSGTEHLAPNMVNIPLPAYTNGVAVREVVETIWLPRLNEFRPQMLFISAGFDAHREDDLGQMGLVEQDYAWITGQLVDLARVHAQGRIVSCLEGGYNLSALGRSVLAHLKVLLER
847169..847972                     enoyl-CoA hydratase/carnithine racemase; CNE_1c08230                                 N/A                 CupriavidusnecatorN1MAENDARVDAPLLTEVRDTAGVVRLTMNRPQAFNALSEGLLDALTEALGRLASDHTVRVVVLAGAGKAFCAGHDLREMRASPSHDYYRRLFDRCTRMMMVIQKMPQPVLARVQGIATAAGCQLVAMCDLAVAADDARFAVSGVNLGLFCSTPGVALSRNLHRKQAMEMLLTGDMIDAETARERGLVNRVVPAGQLDQEVARLAASICAKPAAAVAAGKGLFYRQLEMGIEAAYQLAGQTMACNMMDESALEGVQAFIDKRSPSWRGS
848137..849171                     PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; CNE_1c08240; phage(gi371496158)      2.73e-40            CupriavidusnecatorN1MIELQGLSQRFPGASGDVHALRDVSLSIAAGEVFGIIGRSGAGKSTLVRAINLLNRPSSGRVIVAGQELTALDTGALRLARREIGMIFQHFNLLSSRTVYENVALPLELAGKPKAEIAATVLPLLDLVGLSELKDRYPAQISGGQKQRVGIARALASKPKVLLSDEATSALDPETTRSILELLKQINRDLGLTIVMITHQMEVIKQVCDRVAVLEAGQVVETGRVIDVFLRPQHDVTRAMIGDVISQELPASVLKRVESRLGNGRDHVYRLAFTGEGVDQPVLAQAIRRYGLDFNILHGHIDEIQGQAFGSLAIMATGELADVKAAMEYLQAQGVVVEEFEHVV
849161..849814                     PHAGE_Bacill_G_NC_023719: gp243; CNE_1c08250; phage(gi593777699)                     3.30e-06            CupriavidusnecatorN1MWSEMFDLFLTSFNETLVMVAISGVVGSLLGVPLGVLLHLTNRGGVLSHPLFNRSIGVVVNAARSIPFIILLVVVIPFTRFIVGSSIGTTAAIVPLTIAAIPFIARLVESALREVDKGLVEAAQSMGATTRQIVWKVLLPEAMPGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYGYQRYITEVMVAVVVILIVFVQAVQSFGDWLVRRISHR
849861..850658                     D-methionine-binding lipoprotein MetQ; CNE_1c08260                                   N/A                 CupriavidusnecatorN1MQRRNLLQWILGAAIGATLATGAVAQEKPIKIGVTGGPHAQIMEQVKKVAAKDGLNIQVVEFSDYIQPNAALAAGDLDANSYQHLPYLEAQIKDRGYKFTHIAYTVTFPMGVYSKKIKSLDQLKQGARVGVPNDPTNGGRGLLLLQSKGVIKLKPNAGLKATPLDIVENPKKIRIVELDAAQLPRSLDDLDAAAINGNYAESAGLSPVKDAIAIEGPKGPYANLIAIREADKNKPWVAKLVKAYHSPEIKQYVTSTFKDSVITAW
850878..851627                     electron transfer flavoprotein subunit beta; CNE_1c08270                             N/A                 CupriavidusnecatorN1MKVLVAVKRVVDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSCGVTQCQETLRTAMAIGADRGILVESNEDLQPLAVAKLLKALIDKEQPQLVILGKQAIDDDSNQTGQMVAALAGLPQATFASKVVVADGKASVTREVDGGLETLSLKLPAVVTTDLRLNEPRYVTLPNIMKAKKKQLDIVKPEDLGVDVKPRLSTLKVVEPAKRSAGVMVPDVATLVQKLKNEAKVI
851646..852581                     electron transfer flavoprotein subunit alpha; CNE_1c08280                            N/A                 CupriavidusnecatorN1MTALVIAEHDNQSIKAATLNTVTAAAQCGGDVHVLVAGSNAKAAADAAAKIAGVTKVLLADAPYFGDGLAENVAEQALAIANDYSHILAPATPYGKNILPRVAAKLDVAQISEISKVDAPDTFERPIYAGNAIATVKSEDKIKVITVRGTAFDAAAAEGGSAAVETLPAVADAGVSQFVSREVAKSDRPELTAAKIIVSGGRGVGSGENYTKVLTPLADKLGAALGASRAAVDAGFVPNDYQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDAEAPIFSVADYGLVGDLNTVVPELVAALG
852691..854475                     acyl-CoA dehydrogenase MmgC; CNE_1c08290                                             N/A                 CupriavidusnecatorN1MTYRAPIKDMLFVMNELAGLEAVSKLPGFEEATPETAEAVLDEAAKFNEQVVAPLNRAGDLDPSSWKDGVVSTTPGFKDAFRQFGEGGWQGVLHPQEFGGQGLPKLIATACNEMLNSANLSFALCPLLTDGAIEALLTAGTDEQKATFLPKLISGEWTGTMNLTEPQAGSDLAAVRTRAEPQGDGTYKVFGTKIFITYGEHDMAKNIVHLVLARTPTAPEGVKGISLFIVPKFMVNADGSTGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNSARFSVGMQGIAVSERAYQQAVAFARERVQSRPVDGSAREAVTIIHHPDVKRMLMTMRALTEGARAVAYVAAAASDAAHQHLDEAVRRQNQAFYEFLVPVVKGWSTELSIDVTSLGVQVHGGMGFIEETGAAQHYRDARILPIYEGTTAIQANDLIGRKTVRDGGAVARAICAQIAETEAALGKHGCTAFTAMQAQLAKGRAALEDVVAFVVANAKSDPNAVFAGSVPYLKLCGIVFSGWQFGRAMLAADARRAEDPAFHDAKIATAHFFAEHILSQASALRDAVVSGGAPVNALTAEQF
complement(854554..855858)         D-amino acid dehydrogenase small subunit; CNE_1c08300                                N/A                 CupriavidusnecatorN1MRVLVLGSGVIGVTSAWYLAKAGHEVTVVDREAGPALGTSFANAGQISPGYASPWAAPGVPLKAIKWMFQEHAPLSIRPDGTLFQLQWMWQMLLNCSAGRYAVNKERMVRLAEYSRDCIRALRAETGIAYEGRQQGTLQVFRTEEQLQGAAKDIAVLEEAGVPYQLLSREELAASEPALAAVRHKLAGGLRLPNDETGDCALFTQRLAGMAEMLGVKFLYNRSIDSLMTQGDAVTGAVVNGEPMAADLVVVALGSWSTQLVKPFLSGMSKLPVYPLKGFSITVPLNDPSRSPVSTVLDETYKVAITRFEDRIRVGGMAQIVGYDRSLDPAKRRTLEHVVTDLFPGAGDVSRATFWTGLRPMTPDGTPIVGPTQVRGLWLNTGHGTLGWTMACGSGKLLSDLVSGKSPAIRADDLSVGRYLKPARQHLAPRPAAA
855967..856470                     leucine-responsive regulatory protein Lrp; CNE_1c08310                               N/A                 CupriavidusnecatorN1MRTSRQPMRTLDRLDRKILMALQSDGRMSMKDLAEAVGLTITPCIERVKRLERDGVIMGYYARLNPALLGSALLVFVEISLGNKSGNMFEQFRREVLRIPEVLECHLVSGDFDYLIKARIREIGEYRRLLGDILLQLPGAAQSKSYVVMEEIKETLAISVEEKSQAV
856467..857108                     hypothetical protein; CNE_1c08320                                                    N/A                 CupriavidusnecatorN1MTKASMERPPQKPKPASGRPTRPDADPDALAPQAGPRPPVARKGRGAVSNLQGRFERDLREAFDDGWGSAPEEAPHTIEAAPSPEAAPLPPLRTEVHIERARSVLTRNASPDIPFDVSLNPYRGCEHGCIYCFARPTHAYLDLSPGLDFETQLYAKTNAAERLREALARPSYRCETIALGVNTDAYQPIEREQRITRGLLEVLSECDHRRLST
856733..856744                     attR                                                                                 N/A                 GCCGCCGCTGCG
complement(857122..858201)         PHAGE_Lactob_phiAT3_NC_005893: putative transposase OrfB; CNE_1c08330; phage(gi48697274)     5.06e-11            CupriavidusnecatorN1MGRKRGRLINVPDRRLCISLIREAERSGCRLAQACDELGLSLRTFQRWVREGDEVVADARTTTVRPAPANKLSKAERQQILAVANSVEFASLPPSQIVPTLADRGQYVASESSFYRVLRSASQQHHRGRARKPSARVVTSHCATGPNQVWSWDITWMPAAIKGQYYYWYMMLDVFSRKIVGHEVHRAESAELAALLMRRASLAEGLAGRPLVLHSDNGSPMKGATMLATLENLGVVASFSRPRVSNDNPYAESLFRTCKYRPDYPRQAFGSVDEARAWTQRFVRWYNHVHKHSGLKFVTPAQRHGGVAAAVLAHREAVYAEAKARTPKRWSGPTRNWSLADEVWLNPERIEPAELKQVA

#### region 2 ####
1206426..1207016                   PHAGE_Rhodob_RcRhea_NC_028954: minor tail protein; CNE_1c11850; phage(gi971760207)     6.13e-43            CupriavidusnecatorN1MLTVSVRHNIADVRKTLDNIAQKQMPFAIAKALTQTAKAVAGVESRALPRELDKPTPFTMRAFGTKPATKQRQIASVFIKPDQWKYLRYQVDGGERRPTKRAVVIPQGLRVNQYGNMPKGAIRKLLAKPGVFSGTVNGVPGIYQRKGRSVALLVKYVDKAGYKRRFDFAGIGQQAIAAEFGAIFGRALAGALATAR
1207124..1207642                   PHAGE_Entero_mEp237_NC_019704: terminase small subunit nu1; CNE_1c11860; phage(gi435439266)     4.31e-05            CupriavidusnecatorN1MTELLDDVDRTVTQAAFADLVGISQPAVSDLIGRGTLTRGASLRRWLVEYCENLREQAAGRASTGDLDLIQERAALAREQRIKIAMVNQQLQKELAPVSVLEAVLAKVGRQIATRLEAIPVQIKRRTTTLSAEDIDLITEEITKARNIAAAIKLEDLNDGPVGDSEGDYEGP
1207599..1209647                   PHAGE_Entero_DE3_NC_042057: DNA polymerase; CNE_1c11870; phage(gi100036)             3.28e-142           CupriavidusnecatorN1MDLSEIQKAITKGLSALAAPTPMSLSSWAAEHFYLSAESSYVEQKWQAFPYQVAILDAMSNDDIEEVVFIKSARVGYTKMILAAMGYFAHHKRRNQAVWQPTDEDADDFVKTEVDTMLRDVAAMATVFPAFMQRSKDNTMRKKGFLGSTLHIRGGKAAKNYRRLSVDVIYLDELDGFDSDVEKEGSPVVLSRKRIEGATFPKQILGSTPKLKGFSLIEGRSEQAEQRFSFRVPCPHCGGEHVVRWGGKDKPFGFKWQGDDPGTVLHYCPLCGEGYSQADYLTVWRRGRWVSETGMWIDLDGRFRSPEGEVVRAPRSVSFWVWTAYSEMTPWSQIVREFLSAQAKAKKGDTSELKTFVNTTLGETWEEDVEKADHEQLKARAEPYALRTLPMGVLAVTAGIDVQDDRFEIVVWGWGEGEESWPVDYQVLAANPASEASWDQLDAYLKTTYPHASGQVLGIEAAAIDTGGHFTHQVYNFVRTRGGQRLYAVRGEPAAGKPIKGRATKQDINYKGVMVKRGVRLWHVGTDTAKDLLFGRLKLSTPEPGQSMPGFVHFSDQLPVAFYEQLTAEVRVIQRTPRGEEHRWVKRKSGARNEVLDCTVYAMFAAYCLDLHRYTKPMWDRLRERVAPRQGDLLSDPLPGAIEQLLAVPAEAPATDSSVPEASVPTAHDDNWLGDTDGWLGR
1209660..1209881                   hypothetical protein; CNE_1c11880                                                    N/A                 CupriavidusnecatorN1MAFTLSQLEALEQAIASGELSVKYDGKEVTYRSMDDLTKAYNMVRGSLLATGQLTESSRTNRGPSSLAYFTRD
1209883..1211334                   PHAGE_Stenot_S1_NC_011589: putative portal protein; CNE_1c11890; phage(gi213163905)     3.56e-99            CupriavidusnecatorN1MNWLDNLVSYVSPLAGVRRAQARMALDTVRAYDAAKVGRRTDGWIAGGGSANAEIAPALHRVRQRCRDVVRNNEYAASALDKLVSNTVGTGFTAKAPNQAMWDAWCDYCDADGQLDFSGLMELAHRTRRESGEVIIRFRPRMPEDGFEVPLQLQVLEPDHIDSTKTGPMPNGNYAITGVEFDALGRRVAYWLFPQHPGEIAGFRLNSLESRRVPASEILHYYRKRRPAQVRGMPELGVSLLRLRDLADYEQAELVRKKIEACFVAFVRTDDANQQLGEAKQGASGQRQEKVAPGMIKYLSNAEGVEFGTPSAAGGYGDYTVTQLHAIAVGAGTTYEQMTGDLSRTSYSSMRGGLVEFRRLIGSEQWLALVPMVMKPIAQRFQVTAKLAGKQREAIAPFIWTPPKLEWVDPFKDVMATKEAIRAGMMSLSEAIRERGDDPARVFAEIKRERDELRAMGILSDADAAISERLIDASTAAQVMNQQ
1211399..1213453                   PHAGE_Stenot_S1_NC_011589: putative major head protein; CNE_1c11900; phage(gi213163906)     8.87e-86            CupriavidusnecatorN1MPTPQTPAAAPVAGERRDLPLMGRSAEVGTVDRDARTVDLVWTTGARVQRYDWWNERYYLEELSLDPAHVRMGRLQSGTANLLNTHSSYDLSDVLGVVTAASLDGDQGRASVRFSQRDDVQPYFQDVVDGIIRNVSVGYRIYKMERIAPAVDGDPWIYRAIDWEPYELSLVPVPADPGATTRSAEQGRQQRTFACEFFDQSTPAAAGNPTRKEPNMPGENTTTQPAATTTAATQTAPVVDQRALDAAREEGARAEAERQTGIREAVRLGGLDGAFADQLIGERSMSAADAGMAVLREQARRSAANPTRSAADIQTTRDETDARRAAMGDAIVLRANPRAFNDAARMDAARQFRGMDLMDMARQAIELGGGNCRGLSKREIAVMALNLDRDMQVRGGMSSTSDFPEILGNTVGRSLRQAYQVQTRTFLPFCRPSTAPDFKQVARTQLSEASALQKVNEGGEYKAISFGDSAEKYSLGKYGGIVSITWESLINDDLSAFDRMPMAIAAEAAALEGDIVYGILTGNPNMADGVALFHATHANLAGSGAAISEAALSAGRAAMLKQKGLKNRVLNVKPSFLVVGPDKEFEANKFTSANFVAAKSVDINPVYNTSLEVIVDARITGNLWHLIAEPGLIDTIEYTYLEGEEGLFTEQRRGFEVDGLQIKARHVFAAKAIDWRGLYQNPGA
1213537..1213869                   PHAGE_Shewan_1/44_NC_025463: minor capsid protein; CNE_1c11910; phage(gi712915945)     6.05e-08            CupriavidusnecatorN1MKNFVQKGDTLTLTPAAAVASGEAILVGKIFGVAVTAVAINTPGEFVTEGVFDITALSTDTASVGTVLYWDSTNKRLTTTSTSNTRVGVAVAAKANGDTTARIKLDETVA
1213869..1214171                   hypothetical protein; CNE_1c11920                                                    N/A                 CupriavidusnecatorN1MGFDTARFWPSFKRHGMLSAVSVAGSPDFDGRLDAPSGFFVDNMVQAGDVTLQYPADTPVTLSHGMTLQCKGRTYKVLSEEPERLQDGWLLQVKLKDITP
1214168..1214743                   hypothetical protein; CNE_1c11930                                                    N/A                 CupriavidusnecatorN1MTTTRKAIRHAVRDLLAAQPALTGRVFASRNYPVSEKKLPVVLVYTERDVSEQVTETQEQHTLDVVVRVVVPGDADEGADDQLDDLCTLVTATIAAAIYGWLTPMPTLTDLVENMVQRETNLAYRGDDGQQDLLAAEITFAASYSASPTAEFDQLGIVSVSFDMASPRNDPPTPIGPDGQIDARADIVLPT
1214764..1214952                   PHAGE_Entero_Mu_NC_000929: hypothetical protein; CNE_1c11940; phage(gi9633529)       4.26e-07            CupriavidusnecatorN1MKSITIKPVEGRLVRDPATGREIAEPTPVDGDDPFWIRRLADGDVAEVTNTAASGQPARGDK
1214952..1216433                   PHAGE_Entero_SfMu_NC_027382: tail sheath protein; CNE_1c11950; phage(gi849255269)     1.70e-130           CupriavidusnecatorN1MGQISFNQIPVNLLTPGAYVEFDNSKAVSGLVVMPNRILIIAQMLAAGTATANVPFQADNLAGVQARCGRGSHAALMFEAVLRITDSIETWILPVADSGGGVAATGTVALAGTPTAAGTLNLYVAADRIQVAVATTDTPTTVATALAAAINANADLPVTATSAAGNVTLTARNKGTLGNDIDLRLNYYPLSESTPAGLNVTITAMASGTGDPSIATAIAAMGETQYNTVLMGLSDASNMALIETELDARWGPLRQNDGRVHTAVRGTVGSLNTYASTRNSPHVVAWSVEQGGSPSPVWEHAAIWGAICAFYLGGIDPARPVQTLVGAGLLPASAEKRFTRAERNNLLSYGMATCIANPGGQLAAERAVTMYTQNASGIVDPSYRDVETMYTLSYLRYSVRARISQVYPRHKLANDGTVFDAGQAIATPTMIRAELIALFRDWEEAGLVEDFDQFKADLQVVRSGTDANRVDVLLPPNLVNQFRVFAAQIQFRL
1216482..1216847                   PHAGE_Escher_D108_NC_013594: tail tube protein; CNE_1c11960; phage(gi281199684)      6.23e-07            CupriavidusnecatorN1MAGKQVMGRAFITVAGQRLASVPGSAKLNTGGVERTPQVSDAGTVFYTEKPVQSEIECDILITADTDIIALNSTTDAVVLFQADSGQSYMVRNGAMASPLNPQAGDGKASVKMFGAPAEAV
1216847..1217176                   hypothetical protein; CNE_1c11970                                                    N/A                 CupriavidusnecatorN1MAALANIKVTLSEPIKLKGGGELTELVMARPKARHLRTMEMTAKPSMGMILDLAAELAGLTPEEIDDLEAADAMEVVTELGPFLVKDDGTKPLPSSPTPSTSPQTPSGT
1217256..1218977                   PHAGE_Synech_S_CBS1_NC_016164: tail tape measure protein; CNE_1c11980; phage(gi356870809)     2.99e-11            CupriavidusnecatorN1MADTNKAEIVITALDRASATLQRIGEKFDSVTKPVGRVQEAVGRFTDATGFSKMGGAVSGLTEKLKGLATVSVGLGVGYSVALGGIVATAKAAADAVDQVGDLSSRYGVASQDVQVFGGFVSEAGGNMDDAAKALGKLNKNMSLARAGSKEMQGAFASAGISMADLRSKTPAEVLFKMAEAAKASEKEGAKLATLEAVMGKSGSIMLDALNKGGDELKDRYKQMTADGALFTEEQISQADAFDKSWQRMSRTVEGVKNALGLKLANAMQPLVDRMQAWVVANRAMLESKVDKFAEALPGVLSDVVDVFEGLWNVAVKLGAAFKALKTAIGPTNAVLAVMAPILAPVALAVGQVVFAFGRFAWIMGNGLFIMLPKLIGLIRLVGAAFMANPILAVVGVLAAAAFLLWQNWDWVIGRLAAAWQWLADMASAYVNLVVGFWSGMGQALMAVFTGDWERLGQIVQGALDTIKGWFPGLYDVFVSVWDRIVAWFAPKMQALTSILPSWLTGGSVNVTARGVPAAPVAAQVIAGGQAQRQEVGGRIQIELSGAPAKVTDMRSNNPNVPLDVSSGMYAFG
1219041..1220204                   PHAGE_Entero_SfV_NC_003444: tail/DNA circulation protein; CNE_1c11990; phage(gi19549005)     1.92e-43            CupriavidusnecatorN1MSWRDELRPASFRGVAFETRGHELGGGRRLARHEYPQRDEPYLEDMGKKAREYKVQAFVIGPDYRAARDALLEALEQSGPGELVHPFFGRRSVVAGEFGLKESTEEGGMATFSLVFTEAGKLAEPDVDIDLPAELLASQETAFDEVANDFAESFDVSGLPAWSLDDIEAAINDFLSLDAFKAVANEVSGFVSRVADLVMRPVDFANSVIGLVRRLTDVSSILSTPYMPVRAWRTQSVQAETTTRGVVAKQQAAVNMLFHRAALVQETATLQATDGPTALETRQQVEAARQLVLEHFDTHDVTPGLPRPAPALAAALKALQVNTLVYLRRQSAALPQVYALQLLEATPAVVLAYDLYQNLRADEIVRRNAVRHPGFVPAGVPLEVTSQ
1220201..1221400                   PHAGE_Entero_phiP27_NC_003356: putative tail protein; CNE_1c12000; phage(gi18249913)     1.49e-50            CupriavidusnecatorN1MSEDRNKLTLRVGGQVFGGWTAVRIRHSIEQIAGTFDISYTERWPGQTDGWVIPAGEACEVRIGEHVVITGYVDKTSLSYDASSHTIRVTGRDRTGDLVDCSAPSQAFSGMTFKQLADTLCKPFSITVYDETVDEKKLTVSQKKAGKKGTPPKSARVGGALPKAACQNSESVFRILQRLAKNEGVLLVSDAEGGLLLTRAGRAGTISAPLELGVNILAAEYEHSQANLFSEITVKGQASMQDADSAGGKFENWISPKHTVSRGSGGTKTGNSEITRYRPLIIVAEAQADARRVKQRAEWEASNREAKSRTYKATVQGWYPSADDGDIWRINSLVRVRDPWARIDEDWLLAAVEFNLDEAGSRCTLELTSPKAFEELPELPQPAAGASGAGASGGKMEKW
1221400..1221963                   PHAGE_Entero_SfV_NC_003444: tail protein; CNE_1c12010; phage(gi19549007)             2.06e-49            CupriavidusnecatorN1MLEAIQTMLEPVKNKVGLMVGRCVLRAITDTGKLQRVQVQALADETHDDVERVQQYGFTSVPFAGAEGVVVFVGGNRDHGLVIAVDDRRYRLVGLSAGEVALYDDQGQKVHLTRTGIVVDGAGKDIHFVNAPTVFIPQDLHVGRDIIADRDISDQGGTKSMKGMRTAYNGHRHVETGSTTNTPDAGM
1221963..1222421                   PHAGE_Salmon_ST64B_NC_004313: putative tail protein; CNE_1c12020; phage(gi23505464)     6.27e-24            CupriavidusnecatorN1MDIELFWSTDLGRCEWRQRPDGQLAVDHDLKTAVLISLFTWRRAEADDILPDPRGPRRGWWGDLLAARPIGSRLWLLSREKQTAEVVRRAREYAEEALAWLLDDGVCASVEVITEIVQTGMLGLRCRFTRPDGTAVAYQFDFAWRNLSNVTS
1222423..1223475                   PHAGE_Entero_SfV_NC_003444: tail protein; CNE_1c12030; phage(gi19549009)             7.68e-60            CupriavidusnecatorN1MAYQRPELMDLRDAAYAAIEAIPGADARLRFAVLNALAVMTAGAADGLYGYQEWISKQILPDRAEKEFLDRYASLWLSGGRKQATGGAGLVTVSGTDGTVVPAGTLFIRSDGVQYASQADATVATGTASVSVLATTAGLSTNAVMGQSLTLVTPVPGLQSTAAVGVAGLTTGTDVESDDDLRARLLQRLQQPPDGGSAADYVQWALSVAGVTRAWVAPLELGPNTVVVRFVRDDDASIIPDAAEVAAVQAYIDSVRPVTAEVTVVAPVAMAVNFQIQLTPNTVAVRAAVEAELRDLITREAIPGGTILLSHINEAISLAAGETDHVLTSPSANVAAPVGQLAVFGSITWM
1223466..1224131                   PHAGE_Entero_SfV_NC_003444: tail protein; CNE_1c12040; phage(gi19548988)             7.66e-30            CupriavidusnecatorN1MDVTVTHYRQQLLRLLPQGPAWPQDEGDLAVRVLNALALTYLSVHKAAEQLHEESDPRATSALLDDWERNYGLPDLCLTPPVSVADRRARLVRKVVWGGGQSRAFFLGFLSSLGYPIEPGDPSGAAMDLDFVNQSYRTDGYVTITEFRPFRANSKCNAALNQGGWRYAWRVNVPSTATVRAMTAAARCNEPLGSWGDPGLYCLLAQHKPAHTVLYISYGSS
1224156..1225352                   PHAGE_Synech_S_CAM4_NC_031900: baseplate wedge subunit; CNE_1c12050; phage(gi100200)     3.12e-42            CupriavidusnecatorN1MLVNKAFSDLITFTRASPAWRFNASGILVQDAANTPRVDCDPLALQPRGLLLEEGRTNLITYSAGLENAAWSKSNCTVTPAAGVAPDGTTSACKVIGASGASARYLASAAATASNALVVGSIFAKAGEHSKFRLNLTNFASDSRGVYVDLATGAIYQTDTSGSDFTGISGSMTSVGGGWYRCVVLALKGAANSVVRLAIDPKDNSGAASGDGTSGIYAWGGQLELGAFPTSYVPTTSAAVARAADAASITDLTKIGLNPVQGTLYAEFVAPNMTVAANQSIFSLSDGTTANRIQPFINAGVLTTRVTTAGVAADFTSAISGASAVHKLAIGCAAGSAALSVDGGAAAQTSPTAFPAVSRLYLGSTFDGLGFFLNGYLRALRYYPRKLSNAELQALTAA
1225412..1226386                   PHAGE_Entero_SfV_NC_003444: hypothetical protein; CNE_1c12060; phage(gi19548989)     7.46e-17            CupriavidusnecatorN1MRRISTSTKVTDKFGAGKHGFTNGNAVGGIPATDLEDVWFDHAQEEICSPIEAAGLALDSNDRTQLLQAMQILSAPIVGLMRKARMSVTAASASATFLADQIVVATALGGKHYRLSGFSKTVNLATTGAGGMDTGSAPTSGYVALYAIYNQTSGASALLATNATSAVASHVYSGANMPAGYTASALVSVWPTNGSGQFTVGQQQDRDIYRNSTSVLSTTTSATSVPFTSLSISSAVPPNAVRVKGTRTITFTSATGCAPSFAFAPDSGGSGGNLMYVSGSTSSGPNWGMDFESLVVTQQTLYYAIGNSAAVSVTYAASIVGYSI
1226716..1227501                   hypothetical protein; CNE_1c12070                                                    N/A                 CupriavidusnecatorN1MPDNSHAAWREVRILVDFYRRGDHRNGSTGIFSPKFGLKTKVSGEQFLQFVREQRDADVWIINPFPTIAYYSYNVWMQGEINHPGLTERAQGLLDSCGIGWDLARVPRQTNAVLCYSNFWVGTSAFWEGYVGGVLDPIARYLEASPDTPVAKAVMGDTWHTDAAPFLPFIVERLFSTYLSLQPSVRIASYPIESILDYCLTDFERELVERMRPSVDAADRAGAFPKELAEMQGLLCSLYKRYAIEHFAVNAHPHSGKTVAA
1227589..1228230                   PHAGE_Cronob_ENT47670_NC_019927: putative endolysin; CNE_1c12080; phage(gi431810515)     1.28e-74            CupriavidusnecatorN1MDKQVFRQAAGLSSELAERWYPVVSAALFEFGILAPHRVTAWIAQVGTESAGFARLQESFDYSVDGLQRTFGSRMPPALASTLGRQPGERAVPAERQARIASIVYAKRFGNGEAASGDGWRYRGRGLKQITFADNYHDCGHALGVDLDSQPDLLATDDQLAARSAAWFWYAKGCNQLADLGDFEQLTRRINGGLNGLDDRRQRWQRAQQFIHA
1228253..1228549                   PHAGE_Burkho_KS9_NC_013055: holin gp22; CNE_1c12090; phage(gi255033753)              4.13e-25            CupriavidusnecatorN1MQEPEKSLFMLVVVGAMIGLGKLLASDEAITVRLVFARTVMGAAASMVAGMALIQFPELNPVALVGLGSAFGIVGAQALESYFKRRLRQSEGRHGKGT
1228533..1229072                   PHAGE_Burkho_Bcep176_NC_007497: gp56; CNE_1c12100; phage(gi77864681)                 4.14e-17            CupriavidusnecatorN1MAKALEFLAAWKSRLVAAFLMVAVGAVLGGVLAWWLQGNRYERQLSECGRELAELHAEQARQVAEAVNAARLEEQRRTAAQTEIANAAIQQAEAARVDARAADTARRELLARATALANASRGPGDPATVGGGAPAATPVDLLADVLGRADARAGELAAALDASHGAGRTCERSYDALTP
complement(1229092..1229472)       hypothetical protein; CNE_1c12110                                                    N/A                 CupriavidusnecatorN1MATKELPRDLPALTEEELRDIGQRVRNQDVRDLLWEIARLRQTVQRAHYIAELLYSQGGVMADSWLRQLMEEPCIVEALEADYGSRTPGSRGWRGDVRTPEHEVRLATIQAEARGRIAKRRTRART
complement(1229477..1229725)       hypothetical protein; CNE_1c12120                                                    N/A                 CupriavidusnecatorN1MATTIFLEAHYFGEDREELRLPCDAVAAAAGGLVITGIELRPLQRLKWRPDHLSYWDDGQLLRLAVGPWVTLAPMTVRFTLR
complement(1229780..1230412)       PHAGE_Sinorh_phiLM21_NC_029046: ATP-dependent DNA ligase; CNE_1c12130; phage(gi981221107)     4.43e-25            CupriavidusnecatorN1MATRPSPPPDLTHFQPMLAERRLALPRSGSWHYEIKFDGYRMLAATGTPALRLRQGSDATTWFPELAADLARLPAGAVLDGEVCVLDDIGRPDFDRLHARALRRRWYPGADLVVLCAFDLLAYCGRDLRALPIEQRKAQLQQLLAGTTTGLLYVCAVEDGAWLYHQVLQLKLEGVVAKRAGSVYTAGLSPDWLKIKRPGAVPPGRFRRGG

#### region 3 ####
1361982..1362392                   PHAGE_Bacill_G_NC_023719: gp239; CNE_1c13360; phage(gi593777695)                     1.11e-16            CupriavidusnecatorN1MNDRDANSMTAAALGEMSDRQASSLDDAMPDNRATEVPTLTKAELAEMLFDQVGLNKRESKDMVEAFFDVIREALEQGDSVKLSGFGNFQLRDKPQRPGRNPKTGEVIPITARRVVTFHASQKLKGLVEERAGIAG
1362509..1362934                   MerR family transcriptional regulator; CNE_1c13370                                   N/A                 CupriavidusnecatorN1MSDKSSDRIALPPIPAKRYFTIGEVSELCAVKPHVLRYWEQEFTQLKPVKRRGNRRYYQHHEVLLIRRIRELLYEQGFTINGARNRLDEGRHHSGAAAAPEAAEVGEENAAALSVDISGLRNELVEVQHLLAQLREIAKHG
1362990..1363066                   tRNA                                                                                 N/A                 CGGGGCGTAGCGCAGCCTGGTAGCGTACCTGCATGGGGTGCAGGTGGTCGGAGGTTCAAATCCTCTCGCCCCGACCA
1363017..1363053                   attL                                                                                 N/A                 CCTGCATGGGGTGCAGGTGGTCGGAGGTTCAAATCCT
1363195..1364499                   hypothetical protein; CNE_1c13390                                                    N/A                 CupriavidusnecatorN1MSDHDPAEDFINEHQAEIDTRVALFDKVKERCAAANLATSDDINLEDDGPALIVHMACGRGTREVKLEEASQAQSFLDMDFERYRFLPGYDAIFCPDTGELEALLRQLGSTLQQVSLVTRARLLGKSETRGRVRMQSLEVTGENSTKAILQPESSVLSALLARPSRVSLKISQPGLTSAEEFEKVLVKLSNALFFQVEHLSGIGLGLVRHRPQPAPRSKQSRTNLAEVIQFPTMEYDEAPISLYWYGRNASGIPLLQFLAYYQVLEYYYPVYSKAEANRRVRHVLKEPGFRADRDADVNRLLGVIQAARGGGFFDERAQLSATLKECLDEGELREFFAADEDRKAWFIKSEKQSVLKVRAIPLNDSRADLVSEVAERIYQIRCKIVHTKAEGGAGEVELLLPYSREAESLTHDIELVRYACQKVLICASVPFQL
complement(1364501..1365619)       PHAGE_Burkho_phiE125_NC_003309: putative site-specific integrase; CNE_1c13400; phage(gi17975195)     1.42e-94            CupriavidusnecatorN1MNARRRTKPDGLPSRVYIRYGSYFWVRNTDEKWIKLCRVDEGETRMFERLAEEKRKTDVDGDEGSMSRLVAIYMEQHAKHYAESFRDEWCRRGEDVRKAFKRHGIEEIDPGAVQDFLLGNWPDKLPTQTAMKGWLSKFFAWAVLRRHITINPCREVALKKPKMRKVYIPHGHFLAIRAALAAYKYKKAVRGEVQEVTAKVPTGPEMQVFVDLCYLTCQRSTDIRELRWSQVDRHAGVIHFVPSKTADSSGEAVDWPITPEIDEVLRRAKELRRSIKVQALADDFVLVDRSGKPKTAAACRDAWRDALVRAKLEGKDYTVKDIRAKALTDAKKAGYDIEALQVAGAHTDRATTEGYIKQRDVPVSTVRLSIPR
complement(1365616..1365912)       PHAGE_Burkho_phiE125_NC_003309: hypothetical protein; CNE_1c13410; phage(gi17975196)     1.12e-15            CupriavidusnecatorN1MTEEAQRIIAITRQHWEQQVDNRLMSEQDLQDVTGLKRRSLQVQWFQRHFGVTPVQRADGRVIMTWSAFEGLQAKRAGVLPGASAPTRTPLIPIRKAA
complement(1365909..1366433)       PHAGE_Gordon_BetterKatz_NC_031247: hypothetical protein; CNE_1c13420; phage(gi100069)     7.91e-28            CupriavidusnecatorN1MKRLIETTLDGEAGCILSDCEQYRYRLWRDWDRSTPGLGFIMLNPSTADHLVNDPTVTRCMQRALAGKYGRLEVVNLFPLRSTDPEGLLTHPAPLGDRPDRNECAIMDALDRCSLVICAWGAHKAAPARAAEVLRIIRMCGRGTLLHHLGLNKDGSPKHPLYIAASTKPQRFTA
complement(1366444..1366920)       hypothetical protein; CNE_1c13430                                                    N/A                 CupriavidusnecatorN1MGLGRGLQEAAMTDFILKPKRPAGTGWLLDSSDLAQEAIRRAGVGSWPCEVWLHRQHGICVFSAVEVAREAGQPDLGPEYHLSISQHGGRISAADALWVLAQFDLLDAKEDNHVPHGLVRNFWRPVADRLSGYECPCQGEEPAIREDKGDYVWRGVTK
complement(1366884..1367516)       PHAGE_Escher_RCS47_NC_042128: baseplate subunit; CNE_1c13440; phage(gi100105)        1.08e-39            CupriavidusnecatorN1MKGRPILFSGAMVRAILDGRKTQTRRIVKPQPEVNEQGNLVGDWLAKPLDGLLLPRLQDITIHCPYGKPGDRLWVRETWAQPTAMDPGPTVYRADYPACVPADFTNIPPAEAITWKPSIHMPRAMCRLALEVTGVLVERLNDCSEADAAAEGVWRDCEVPFNGPWFASQDSHVGFADPRGAYQNLWDNIKGAGAWDSNPWVWVVDFRRLP
1367552..1367800                   hypothetical protein; CNE_1c13450                                                    N/A                 CupriavidusnecatorN1MAPMTKFFDKKLEDELGTAAALQIAALGADVRATMDRMNAIRVAQGKPTLEQEMAELEAFEQEEIRSGRAKPEDFEWEPPLD
complement(1367803..1368867)       PHAGE_Burkho_phiE125_NC_003309: putative DNA cytosine methylase; CNE_1c13460; phage(gi17975218)     2.36e-143           CupriavidusnecatorN1MLTNHCYQGDCREVMRELIAAGVRVQCIVTSPPYWGLRDYGVHGQLGLEASLPEFLANMVEVFVLCRQLLADDGTLWLNMGDSYAGSRGAPWGPSPAATEARSMTASRRRDDTPIPRSDVRVEGLKPKDLVGQPWRLAFALQDSGWWLRQDIVWHKPNPMPESVHDRCTKAHEYVFLLTKSEKYFYDFEAMQEPVSGGAHARGAGVNPKAAPSGWDTSPGGHRQLKGRYSGTGVGFGRGYDKVVKPRVKQNASFSAAVTESVGTRNRRSVWTIPTQSFDGAHFATFPESLVEPCILAGSRPGDIVFDPFMGSGTVASVAQRLGRRWLGAELNPDYIALLAERTRQLGLVLESAA
complement(1368861..1369559)       hypothetical protein; CNE_1c13470                                                    N/A                 CupriavidusnecatorN1MIGMNSELLFDQVFAKTGIHAIDIVYVQLRSPRVSPRFEGFIGCMGALVLLLRFPQRLSKVGQGKRQVGHGKHDFRLSDLVERYRCHCASRLLDALHDCGNASKDERRRIDVEIGREQQTFRSDCSIYPSFGNCSDGVAHALGLSYLCLFLKSISGTLLTQSQEICPCNRRNRSGGLHPTCHKAGIVRLSHCRSGAKNRYRDDGNSAAKCPKHGLPPLHLFSSLLARGIVAC
complement(1369556..1371346)       PHAGE_Pseudo_phiCTX_NC_003278: hypothetical protein; CNE_1c13480; phage(gi17313261)     0.0                 CupriavidusnecatorN1MIRREYKTFGFCCGLGGGAKGFKKAASQVGNMVATWRCIGGIDVDPAAARDFETLVGVPCTVMDLFTRQQYTAFHGKEPPAGWREAMPSDIRRAASNERPNCVFISSPCKGASGLLSETLSRTPKYQALNELTLRCVWLMCEAWKDDPVELIVFENVPRLATRGRHLLDQINQILRHYGYAVNETTHDCGELGGLAQSRKRFLLVARHMERVPAFLYEPELRRLQGVGTVLGRMPQPGDAAGGPMHRVPSLQWKTWVRLAFVEAGSDWRSLNRLEVVNGHLRDYLIMPERRNGALGVLNWDEHAGAVAGESLPSNGTFSIADPRGPANAAQYQQYGVLRWGEASGTITAGTNPGQGTFSVADPRHAGPAKHNNEFRIVPWQQAAGAVTSAHGTGQCVQDPRASMGFEGAGKYRITGYDEPAGTVIARSDTGQGAYAVADPRPGMRRERGDNYLTGGHYGVVSWDQPSGAVSAAAGHDNGRWSVADPRLPAANDKLVAIIRALDGTWHRPFTTLELAAIQSLIEPEEYLELDGLSDQAWRERIGNAVPPDAAQAIAEVMGTTLLLAESGETFMLSATPVWVRPVAVALSVAQPAEVA
1381357..1381393                   attR                                                                                 N/A                 CCTGCATGGGGTGCAGGTGGTCGGAGGTTCAAATCCT

#### region 4 ####
complement(3094038..3094799)       PHAGE_Strept_TG1_NC_018853: putative regulator, GntR family; CNE_1c29730; phage(gi410491962)     1.11e-08            CupriavidusnecatorN1MNHAAGTASSASASPTALYQQVKEYIARQIQSGAWQPGDRVPSEQELVNRFGVSRMTVNRALRELQEQGRVVRVAGVGTFVAEHKPQSTLLSVVNLQDEIRMRGHDYACDVILVERVSASIEVAAALELRTGESVFHSVCVHREDGVPVQLEDRYVNPRVAPDFISQDFSETQPGEYLLRHVPYDQVEHVVDAIAATPEQAAQLEMPATQPCLMLTRRTWTNGVPVTFVRCLHPGNRYRLGSRFRADGNPAFG
complement(3094816..3095595)       PHAGE_Bacill_G_NC_023719: gp245; CNE_1c29740; phage(gi593777701)                     2.30e-48            CupriavidusnecatorN1MSALSIQQVSRTFSNPRGGQTLALQPVDFEVRDNDFVTILGPSGCGKSTLLRIVAGLDTPTSGRVLLDGQPVSAPGADRGMVFQSYTLFPWLTIEQNVRFGLRERGMSAAEQKERSDFFIQRVGLCGFEHHYPKQLSGGMQQRTAIARALANDPKILLLDEPFGALDNQTRVLMQELLLGIWEASRKTVLFVTHDIDEAIFMANRVAVFSARPGRIKSEIAVDFPHPRHYTVKTTPEFSALKARLTEEIRAEAMASAEH
complement(3095592..3096461)       PHAGE_Bacill_G_NC_023719: gp243; CNE_1c29750; phage(gi593777699)                     1.86e-29            CupriavidusnecatorN1MTQARLGTPAPAAAAAAPAAAAAPVRRRHPWLAPLVPVAPNTRWMLGLSFFVLFFGIWAVVTLGGFVPRTFLADPMTMAREGVLLFTEYNFIGDIGMTVWRVVGGFVLAAVLAVPLGIFMGAYKAAEAFFEPFVSFCRYLPASAFIPLLILWAGIGETQKLLVIFIGSFFQIVLMVAVAVGGARKDLVEAAYTLGSNSAGIVRRVLIPGAAPEIAEILRLVLGWAWTYVIVAELIGSSSGIGHMITDSQALLNTGQIIFGIIVIGCIGLVSDLVFKRANQRLFPWSSIQ
complement(3096489..3097457)       PHAGE_Bacill_G_NC_023719: gp249; CNE_1c29760; phage(gi593777705)                     8.12e-17            CupriavidusnecatorN1MRNHSRIRGRMAVQAVVLVAALGAGAAQAQNTQVTLGMSGWTGFAPLTLADKAGIFKKHGVDVDIKMIPQKDRHLALASGAIQCAATTVETHVAWNANGVPITQIVQLDKSYGADGLAVRSDVKGFADLKGKTIGVDAPGTAPYFGLAWMLKKNGMTLKDVKTTTLSPQAAAQAFVAGQNDGAMTYEPYLSTVRQNPDKGKILATTLDYPMVTDTLGCAPKWLKENPKAAQALVDSYFEALEMIQKEPAKANDIMGAAVKQTGEQFAKSSAYLRWQDREANRKFFAGELASFSKEAAAVLLDIGVIRQVPDVTALYDARFLK
complement(3097766..3098773)       nucleoside-diphosphate-sugar epimerase; CNE_1c29770                                  N/A                 CupriavidusnecatorN1MSQILSKLQPSRLPQAPRLPAPSRRLGRPRLLIVGCGDVGTRCLRILSSRMRVFAVTSQPARRAELRAAGAVPLVADLDRPATLARLHGLATQVLDLAPPPGQGEGDPRTRALLAALRRAAWRKARTSAGMLPGEPAILPDRGRPRAAFVYASTSGVYGDRQGARVSEFHAVRPQTARARRRVAAEQAVRGFGRDAGWRASIVRIPGIYAEDRLPLARLHRGTPALVPQDDVYTSHIHADDLARTMVAALFRGRAQRVVHASDDTELRMADYFDLVADRRGLPRPPRITRGEAREVIDKTLLSFMSESRRLDNRRLKRELRLRLRYPTVTSFFDA
3098783..3099847                   PHAGE_Synech_S_CAM9_NC_031922: hypothetical protein; CNE_1c29780; phage(gi100068)     1.05e-10            CupriavidusnecatorN1MAYQVTVMPSGHKFEVAADETILGAALRHSIGLPYGCKNGACGSCKGRVLEGTIVQGDHAPAALTAQEKTEGRALFCCANAASDVTIECREVHGAGDIPIKKVPCRVTAIERLADDVIAIKLQLPATERMQYLAGQYVEFLLRDGKRRSYSIATPPHEDGPIELHIRHMPGGAFTDYVFGAKEGQPVMKERDILRFEGPLGSFFLREESEAPIILLASGTGFAPIKAIVEHAAYTGIERPMTLYWGGRRPKDLYMHALCEQWARELPNFQYVPVVSDALPDDNWQGRTGFVHQAVIADHPDLSGHEVYACGAPVMINAARGDFTRQCNLHEDAFFADSFTSEADMHPAGSAPAA
3100132..3101319                   PHAGE_Mycoba_Lukilu_NC_041901: chaperone for tail fiber formation; CNE_1c29790; phage(gi100190)     1.83e-07            CupriavidusnecatorN1MAFAEYPVQSLMYITNRPELVFTEGKGSWLTDHNGKRYLDFVQGWAVNCLGHSNQGMIDALVAQSHRLINPSPAFYNEPMLKLARQLTDHSCFDKVFFANSGAEANEGAIKLARKWGRKHKDGAFEIITMDHSFHGRTLATMSASGKAGWDTIFAPQVSGFPKADLNDLASVEKLITDKTVGIMLEPVQGEGGVLPATREFMQGLRALADKHRLLLIVDEVQTGCGRCGTLFAYELAGVEPDIMTLGKGIGGGVPLSALLCKAEAASFEAGDQGGTYNGNPLMTAVGSAVIEQLTAPGFLDDVKAKGEYLREQLLALSAEFGLGGERGDGLLRALMLGKDIGPQLVEEARDMAPQGLLLNAPRANLLRFMPALNVTREEIDQMTGMLRTLLKKLA
complement(3101534..3102418)       PROPHAGE_Xantho_33913: ISxac3 transposase; CNE_1c29800; phage(gi21231086)            2.47e-73            CupriavidusnecatorN1MSYRVVAHLQQEAVSVSNACRVLQVSRSGYYAHRRAKPSMKTLQEQTHVKAAFAASGASYGSRRVMHAVREQGVRLGRYRIRRLMREAGLRATWKRKFVSTTDSKHTLPVAENVLDRQFDVAEPNRAWTSDITYIRTAQGWLYLAVVLDLYSRKVVGWSMAPTMPADLVMSALSMALQQRRPAPGLVLHSDRGSQYASAEYQTLLARHQIVCSMSRKGNCWDNAVTERFFLNLKMERVWQRQYANHAEARRDITQYIVGFYNPVRLHSTLGYLSPAAYEAKSIEKEPICLSEIT
complement(3102415..3102612)       PHAGE_Escher_PA28_NC_041935: hypothetical protein; CNE_1c29810; phage(gi100078)      6.31e-09            CupriavidusnecatorN1MELGETAVRRWMAQYDAECAGGPGVGKPLTAEQQRIRQLEAENRQLREDNALLKKASAFFARELK
complement(3102864..3103580)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; CNE_1c29820; phage(gi371496158)      4.73e-17            CupriavidusnecatorN1MNDIVLKISGLKVAYGGIQAVKGIDLDIKDGELVTLIGANGAGKTTTMKAITGLQGWGGGDVEYMGKSIKGVPSYALLKHGMAMVPEGRGVFARMTITENLQMGAYTRNDEAGIKADIDRMFGIFPRLKERANQLAGTMSGGEQQMLAMARALMSQPKLLLLDEPSMGLSPIMVEKIFEVVRDISAQGVTVLLVEQNARLALQAAHRGYVMESGLITMSGDAKEMLDDPKVRAAYLGE
complement(3103595..3104371)       PHAGE_Plankt_PaV_LD_NC_016564: ABC transporter; CNE_1c29830; phage(gi371496158)      6.02e-23            CupriavidusnecatorN1MSNDNFLLSVQGVNKRFGGLQALSEVGLQIKQGEIYGLIGPNGAGKTTFFNVITGLYTPDSGEFVLDSKPYQPTAVHEVAKAGIARTFQNIRLFGDMTALENVMVGRHVRTKANLLGAVFRPPSVRREEEAIEDMAHDLLEYVGIGKYANFTSRNLSYGHQRRLEIARALATEPKLLALDEPAAGMNATEKVELRGLLDKIRSDGKTILLIEHDVKLVMGLCNRMTVLDYGKVIAQGLPHDVQNNPAVIEAYLGTSAH
