gi|383305933|ref|NC_017026.1|  Mycobacterium tuberculosis RGTB327 chromosome, complete genome. 4380119, gc%: 65.63%

CDS_POSITION                       BLAST_HIT                                                                            EVALUE              prophage_PRO_SEQ
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#### region 1 ####
2955788..2955800                   attL                                                                                 N/A                 CCCACCGGGAGCC
2965313..2965777                   PHAGE_Vibrio_12A10_NC_029067: hypothetical protein; MRGA327_16290; phage(gi985769831)     7.25e-11            MycobacteriumtuberculosisRGTB327MLQPIGVTPDRRLVFGQRRLEAARLLGWERIPVHVCHTIADVVDRAKAERSENTLRKDFTPSELLAAGRRIAELERPKAKQRQREGGDHGRQARYSGLGSMEPKPESERDAHKADTAISEALGISRGHYQRLKRIDNATRSEAGYRDGLNGWSG
2965910..2966236                   PHAGE_Gordon_Cucurbita_NC_031029: hypothetical protein; MRGA327_16295; phage(gi100019)     8.31e-30            MycobacteriumtuberculosisRGTB327MSGGSSRRYPPELRERAVRMVAEIRGQHDSEWAAISEVARLLGVGCAETVRKWVRQAQVDAGARPGTTTEESAELKRLRRDNAELRRANAILKTASAFFAAELDRPAR
2966287..2967171                   PHAGE_Burkho_phiE125_NC_003309: putative transposase OrfB; MRGA327_16300; phage(gi17975200)     1.21e-103           MycobacteriumtuberculosisRGTB327MRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRVHAANYGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTTRGKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIKPGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAYYAQRQRPAAG
complement(2967198..2967383)       hypothetical protein; MRGA327_16305                                                  N/A                 MycobacteriumtuberculosisRGTB327MARSVNDYRRELERWVRQQQRVQDQFRMGVQRAIEREIRRRYEAWRRQAEQARKAADEPPR
complement(2967546..2968751)       PHAGE_Gordon_Zirinka_NC_031097: hypothetical protein; MRGA327_16310; phage(gi100006)     5.72e-82            MycobacteriumtuberculosisRGTB327MVPGAPTGGDDGDAPPGNSLRDTAFRTLDVCVRDGLMSSRAAEAAETLCRTGPPQSTSWAQRWLAATGNRDYLGAFVKRVSNPVAGHTTWTDREAAAWREAAAVAAEQRAMGLVDTAGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSEVWRGVTSEGAEAHWYSEAQEVSDDSPTLAQPAVPSYRGSCWIPFSLEIEGDAAGFVAEVGRVLADSVEQLQAAAFVSGSGNGEPTGFVSALTGTADYTVTGAGTEAVVAADVYALQSALPPRFQSNSAFAANLSTINVLRQAETANGALKFPSLHASPPMLAGKHIWEVSNMDTVDAAVTATNYPLVLGDWKQFIITDRVGSTVELVPHVFGGNRRPTGQRGFFCWFRVGSDVLVDNAFRVLKVQTTA
complement(2968994..2969530)       PHAGE_Gordon_GMA5_NC_030907: hypothetical protein; MRGA327_16315; phage(gi100006)     2.48e-08            MycobacteriumtuberculosisRGTB327MSSILFRTAELRPGEGRTVYGVIVPYGEVTTVRDLDGEFREMFAPGAFRRSIAERGHKVKLLVSHDARTRYPVGRAVELREEPHGLFGAFELANTPDGDEALANVEMASVVDAFSVGFRPIRDRREGDVIVRVEAALLEVSLTGVPAYLGAQIAGVRAESLAVVSRSLAEARLALMDW
complement(2969683..2970015)       PHAGE_Gordon_Kita_NC_031233: protector from prophage-induced early lysis; MRGA327_16320; phage(gi100001)     5.89e-13            MycobacteriumtuberculosisRGTB327MWGRVVPELAALNLLKESDLGVLTSFCVAWDQLMQAVTAYREQGFIATNARSRRVTVHPAVAAARAATRDVLVLARELGCTPSAEANLAAVLAAAGDPDDDEFNPFAPDR
complement(2970345..2970764)       phiRv2 phage protein; MRGA327_16325                                                  N/A                 MycobacteriumtuberculosisRGTB327MIRREPAERTRLSDTRNTVDHIIFQGERSPSLTHKRTKRQPAIAAGLNAPRRNRVGRQHGWPADVPSAEQRRAQRQRDLEAIRRAYAEMVATSHEIDDDTAELALLSMHLDDEQRRLEAGMQLGEEPRWLSPDEPDSKQ
complement(2970751..2970996)       phiRv2 phage protein; MRGA327_16330                                                  N/A                 MycobacteriumtuberculosisRGTB327MSGHALAARTLLAAADELVGGPPVEASAAALAGDAAGAWRTAAVELARALVRAVAESHGVAAVLFAATAAAAAAVDRGDPP
complement(2970993..2972420)       phiRv2 phage protein; MRGA327_16335                                                  N/A                 MycobacteriumtuberculosisRGTB327MADIPYGRDYPDPIWCDEDGQPMPPVGAELLDDIRAFLRRFVVYPSDHELIAHTLWIAHCWFMEAWDSTPRIAFLSPEPGSGKSRALEVTEPLVPRPVHAINCTPAYLFRRVADPVGRPTVLYDECDTLFGPKAKEHEEIRGVINAGHRKGAVAGRCVIRGKIVETEELPAYCAVALAGLDDLPDTIMSRSIVVRMRRRAPTEPVEPWRPRVNGPEAEKLHDRLANWAAAINPLESGWPAMPDGVTDRRADVWESLVAVADTAGGHWPKTARATAETDATANRGAKPSIGVLLLRDIRRVFSDRDRMRTSDILTGLNRMEEGPWGSIRRGDPLDARGLATRLGRYGIGPKFQHSGGEPPYKGYSRTQFEDAWSRYLSADDETPEERDLSVSAVSAVSPPVGDPGDATGATDATDLPEAGDLPYEPPAPNGHPNGDAPLCSGPGCPNKLLSTEAKAAGKCRPCRGRAAASARDGAR
complement(2972422..2972814)       phiRv2 phage protein; MRGA327_16340                                                  N/A                 MycobacteriumtuberculosisRGTB327MTAVGGSPPTRRCPATEDRAPATVATPSSTDPTASRAVSWWSVHEYVAPTLAAAVEWPMAGTPAWCDLDDTDPVKWAAICDAARHWALRVETCQAASAEASRDVSAAADWPAVSREIQRRRDAYIRRVVV
complement(2972811..2973071)       PHAGE_Mycoba_GUmbie_NC_023746: gp40; MRGA327_16345; phage(gi609252700)               8.93e-22            MycobacteriumtuberculosisRGTB327MCAFPSPSLGWTVSHETERPGMADAPPLSRRYITISEAAEYLAVTDRTVRQMIADGRLRGYRSGTRLVRLRRDEVDGAMHPFGGAA
complement(2973088..2973453)       hypothetical protein; MRGA327_16350                                                  N/A                 MycobacteriumtuberculosisRGTB327MMADAVKYVVMCNCDDEPGALIIAWIDDERPAGGHIQMRSNTRFTETQWGRHIEWKLECRACRKYAPISEMTAAAILDGFGAKLHELRTSTIPDADDPSIAEARHVIPFSALCLRLSQLGG
complement(2973453..2974580)       PHAGE_Mycoba_Equemioh13_NC_028852: integrase; MRGA327_16355; phage(gi971749513)      2.06e-82            MycobacteriumtuberculosisRGTB327MTQTGKRQRRKFGRIRQFNSGRWQASYTGPDGRVYIAPKTFNAKIDAEAWLTDRRREIDRQLWSPASGQEDRPGAPFGEYAEGWLKQRGIKDRTRAHYRKLLDNHILATFADTDLRDITPAAVRRWYATTAVGTPTMRAHSYSLLRAIMQTALADDLIDSNPCRISGASTARRVHKIRPATLDELETITKAMPDPYQAFVLMAAWLAMRYGELTELRRKDIDLHGEVARVRRAVVRVGEGFKVTTPKSDAGVRDISIPPHLIPAIEDHLHKHVNPGRESLLFPSVNDPNRHLAPSALYRMFYKARKAAGRPDLRVHDLRHSGAVLAASTGATLAELMQRLGHSTAGAALRYQHAAKGRDREIAALLSKLAENQEM
complement(2974725..2974952)       hypothetical protein; MRGA327_16360                                                  N/A                 MycobacteriumtuberculosisRGTB327MIAGVDQALAATGQASQRAAGASGGVTVGVGVGTEQRNLSVVAPSQFTFSSRSPDFVDETAGQSWCAILGLNQFH
2975093..2975251                   hypothetical protein; MRGA327_16365                                                  N/A                 MycobacteriumtuberculosisRGTB327MSGGWLAEHLGLSTNRLRHELADRLDAHYGPPAQNRELARPSLRIINEGTDG
2975615..2975848                   PHAGE_Gordon_Zirinka_NC_031097: membrane-associated initiation of head vertex; MRGA327_16370; phage(gi100034)     2.12e-05            MycobacteriumtuberculosisRGTB327MEVRASARKHGINDDAMLHAYRNALRYVELEYHGEVQLLVIGPDQTGRLLELVIPADEPPRIIHANVLRPKFYDYLR
2975859..2976113                   PHAGE_Gordon_GMA5_NC_030907: exonuclease A; MRGA327_16375; phage(gi100018)           2.12e-05            MycobacteriumtuberculosisRGTB327MKHKTDIDEWLDTIEPNPADAHDASHLRRIIAAKEAVQTAESELRAAVNAARAAGDTWAAIGVALGITRQAAFQRFGPHSTASP
2976834..2977637                   PHAGE_Paenib_Vegas_NC_028767: transposase; MRGA327_16380; phage(gi971741608)         2.50e-49            MycobacteriumtuberculosisRGTB327MTSSHLIDTEQLLADQLAQASPDLLRGLLSTFIAALMGAEADALCGAGYRERSDERSNQRNGYRHRDFDTRAATIDVAIPKLRQGSYFPDWLLQRRKRAERALTSVVATCYLLGVSTRRMERLVETLGVTKLSKSQVSIMAKELDEAVEAFRTRPLDAGPYTFLAADALVLKVREAGRVVGVHTLIATGVNAEGYREILGIQVTSAEDGAGWLAFFRDLVARGLSGVALVTSDAHAGLVAAIGATLPAAAWQRCRTHYAANHGRHNA
2977659..2978417                   PHAGE_Mycoba_Myrna_NC_011273: gp251; MRGA327_16385; phage(gi203454812)               1.28e-21            MycobacteriumtuberculosisRGTB327MPEPTPTAYPVRLDELINAIKRVHSDVLDQLSDAVLAAEHLGEIADHLIGHFVDQARRSGASWSDIGKSMGVTKQAAQKRFVPRAEATTLDSNQGFRRFTPRARNAVVAAQNAAHGAASSEITPDHLLLGVLTDPAALATALLQQQEIDIATLRTAVTLPPAVTEPPQPIPFSGPARKVLELTFREALRLGHNYIGTEHLLLALLELEDGDGPLHRSGVDKSRAEADLITTLASLTGANAAGATDAGATDAG
2978471..2978483                   attR                                                                                 N/A                 CCCACCGGGAGCC

#### region 2 ####
4044143..4044490                   PROPHAGE_Escher_CFT073: transposase; MRGA327_22390; phage(gi26248360)                1.80e-07            MycobacteriumtuberculosisRGTB327MLSVEDWAEIRRLRRSERLPISEIARVLKISRNTVKSALASDGPPKYQRAAKGSVADEAEPRIRELLADYPRMPATVIAERIGWWYSIRTLSGRVRELRPLYLPPDPASRDICGR
4044922..4045314                   transposase; MRGA327_22395                                                           N/A                 MycobacteriumtuberculosisRGTB327MQAWLVRANHRQHRVLGCRPADRIEADTAAMLTLPPVGPSIGWRTSTRLPRDHYVRLDGNDYSVHPVAIGRRIEITADLSRVRVWCGGTLVADHDRIWAKHQTISDPEHVRGRQTAATQTVRHRRSTPPR
4045378..4046124                   PROPHAGE_Escher_CFT073: transposase/IS protein; MRGA327_22400; phage(gi26248359)     5.93e-45            MycobacteriumtuberculosisRGTB327MAAKTATNSRDVAAELAYLTRALKAPTLRGAIEQLADRARTKTWSYEEFLAACLQREVSARESHGGEGRIRAARFPSRKSLEEFDFDHARGLKRDTIAHLGTLDFVTLAIGIAIRACQAGHRVLFATASQWVDRLAAAHHSGTLQSELIRLARYPLLVVDEVGYIPFEPEAANLFFQLVSSRYERASLIVTSNKPFGRWGEVFGDDVVAAAMIDRLVHHAEVIALKGDSYRIKDRDLGRVPTVTADDQ
complement(4046914..4047978)       PHAGE_Paenib_Vegas_NC_028767: transposase; MRGA327_22405; phage(gi971741608)         2.12e-67            MycobacteriumtuberculosisRGTB327MTDRNGARSRVLSTQAGDVELRIPKLRKGSFFPAILEPRRRIDQALYAVVMEAYVHGISTRAVDDLVEAMGVETGISKSEVSRICAGLDEIVGAFRTRTLGHIEFPYVYLDATYLNVRNGTGQVVSMAVIVASGIAADGSREILGLDVGDSEDETFWRGFLTSLKGRGLGGVRLVISDQHAGLVKALKRCFQGAGHQRCRVHFARNLLAHVPKDKADMVASMFRMIFSAPDAEAVHATWEGVRDRLAASFPKIGPLMDDARAEVLAFTAFPKAHWQKIWSTNPLERINKEIKRRSRVVGIFPNPAAVIRLVGAVLADMHDEWQASERRYLSEASMALLYPDSDNAVVAAISGGQ
complement(4047995..4048183)       putative transposase; MRGA327_22410                                                  N/A                 MycobacteriumtuberculosisRGTB327MCTAKHAPKEIPPMALPQSALSELLDAFRTGDGVDLIRDAVRLVLQELSELEATERIGRCPL
complement(4048320..4048856)       PHAGE_Salmon_SP_004_NC_021774: hypothetical protein; MRGA327_22415; phage(gi526003651)     6.04e-06            MycobacteriumtuberculosisRGTB327MPNCVMPRTTSLKARVIELREDPNLLGDRTDLAYLRAIHRQLFQDIYVWAGDLRTVGIEKEDESFCAPGGISRPMEHVAAEIYQLDRLRAVGEGDLAGQVAYRYDYVNYAHPFREGNGRSTREFFDLLLSERGSGLDWGKTDLEELHGACHVARANSDLTGLVAMFKGILDAEPTYDF
complement(4048967..4049161)       hypothetical protein; MRGA327_22420                                                  N/A                 MycobacteriumtuberculosisRGTB327MFVQATELQKVKRRFRNVRATRRNTELEGTRSTAATRADQNDYARGKITAAELGERVRRRYNIQ
4049326..4049460                   hypothetical protein; MRGA327_22425                                                  N/A                 MycobacteriumtuberculosisRGTB327MTGRKAGGAPYTVTIPEFGAAALREQRALVIPFDPVFPARRGTR
4049556..4049747                   PHAGE_Gordon_Yeezy_NC_031269: membrane-associated initiation of head vertex; MRGA327_22430; phage(gi100034)     9.38e-07            MycobacteriumtuberculosisRGTB327MERSIGLEAAAQQAGHSGSEITRRHYVERSVTVPDYTAALDEYSRPIRAFRPLKSNRPGDIPT
complement(4049758..4049833)       tRNA                                                                                 N/A                 GCCGCCTTAGCTCAGTCGGTAGAGCGATTCACTCGTAATGAATAGGTCAGGAGTTCGATTCTCCTAGGCGGCTCCA
complement(4049912..4051117)       PHAGE_Clostr_phiCTP1_NC_014457: putative DNA polymerase III; MRGA327_22435; phage(gi304360727)     7.28e-12            MycobacteriumtuberculosisRGTB327MSGVFTRLVGQQAVEAELLATAKAARRDSAHSAGGGGTMTHAWLLTGPPGSGRSVAALCFAAALQCTSGGEPGCGRCRACTTTLAGTHADVRRVIPEGLSIGVDEMRAIVQIAARRPTTGHWQIVVIEDADRLTEGAANALLKVVEEPPPSTVFLLCAPSVDPEDIAVTLRSRCRHVALVTPSTHAIAQVLSDGDGLDPDTANWAASVSGGHVGRARRLATDPQARQRRERALGLARDAATPSRAYAAAEELVAGAEAEALALTAQRIEAETEELRTALGAGGTGKGTGAALRGATGAMKDLERRQKSRQTRASRDALDRALIDLATYFRDALLVAAHAGGVRANHPDMADRVAALAAHAPPERLLRCIEAVLACREALAVNVKPKFAVDAMVATIGQELR
